Rh2DG421800

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000447
Physical Location & Seq
Forward (+)
61177051 .. 61181398
4348 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG421800.1

Sequence Viewer

Length: 1239 bp
ATGGCTCAAGTTGGATTACCATGGTGTGGTTTGAGGTGGAGTATGGGAATGGTTGTGGCTGGTTTTCTTGTTGTGGCTTTAGTGATTGGTTCACTACAAGAAACATTCCAACAAGATGCTTCAACTTACAGTGGGACTGAAAAGTTCCAATCTGGTTATTTAAACAGAGTGCTAAGCTTTGTATGGCGACCGGGTCGATTGGGTTATGTGGCTGTTTGGCCTGAAATGGAATTTGGTTGGAGAATTGTGGTGGGAACAATAATTGGATTCATTGGAGCTGCGTTTGGGACTGTGGGAGGAGTAGGTGGGGGTGGCATTTTTGTTCCTATGCTCACTTTGATTATCGGGTTCGATGATAAATCATCAACAGCATTATCGAAGTGCACATCAACTAAGGCCTTCTTCAAGGGAGTTGAGTCCTGGAAAAGAGAAACTATACTGAAGAAGGAAGTTGCCAGACTAATGCAGTCAAATGCTAATGGTAGTGAAGAAGTTGAATACAGACCTTTACCTGGCGCTCCAACCAACAATAGTCTATCAGAAACAAATGAGTCTAAAAGGAAAGAGGTTTCTATTATTGAGAATATTTGCTGGAAGGAGCTTGGACTTCTAGTTGTTGTCTGGATCTTAATGCTTGCGTTGCAGATTGCTAAGTATTATACCACAACTTGTTCGGTAGCATATTGGGTATTGAACCTCATGCAGATCCCTGTGGCTTTTGGAGCGAGTTCATACGAGGCTGTTAGACTGTACTATGGACAAAGAGTGATTTCATCCCAGGAAGTATCAAGCACGAATTGGAAAGTGCACCATCTTATTCTTTATTGTGGCTGCGGCACCATAGCTGGTATAGTTGGTGGTTTGCTTGGACTTGGTGGAGGCTTCATTCTGGGTCCTCTTTTTCTGGAGCTGGGAGTCCCACCTCAGGTGTCGAGTGCCACAGCTACATTTGCCATGACATTTTCTGCATCCTTGTCAGTTGTTGAATACTACCTCCTCAAACGTTTTCCAGTTCCCTATGCTCTCTACTTTACTGCTGTGGCAAGCGTTTCAGCCCTCGTAGGGCAACATGTGGTGAGAAAGGTTATTAAAATACTAGGGAGAGCGTCTATAATTATCTTCATTCTCGCCGCAACAATCTTTGTCAGTGCAATATCACTAGGTGGGGTTGGCATAGCGAATATGATTGAAGAGATTGAGAACAACGAGTATATGGGATTTGAAGACATGTGCACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

412

Amino Acids

44.74

Weight (kDa)

8.07

Isoelectric Point (pI)

39.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 276 - 382 4.7e-11 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 836
AccB7I CCANNNNNTGG 1 cut(s) 26
AciI CCGC 2 cut(s) 834, 1131
AclI AACGTT 1 cut(s) 1003
AclWI GGATC 2 cut(s) 632, 700
AcsI RAATTY 1 cut(s) 230
AcuI CTGAAG 1 cut(s) 461
AdeI CACNNNGTG 1 cut(s) 1163
AfaI GTAC 1 cut(s) 752
AfiI CCNNNNNNNGG 4 cut(s) 26, 512, 925, 1062
AflIII ACRYGT 2 cut(s) 1069, 1227
AgsI TTSAA 7 cut(s) 123, 406, 497, 694, 986, 1190, 1223
AjnI CCWGG 3 cut(s) 419, 511, 777
AjuI GAANNNNNNNTTGG 2 cut(s) 216, 248
AluBI AGCT 6 cut(s) 177, 278, 601, 845, 910, 944
AluI AGCT 6 cut(s) 177, 278, 601, 845, 910, 944
Alw21I GWGCWC 3 cut(s) 386, 810, 1235
Alw44I GTGCAC 3 cut(s) 382, 806, 1231
AlwI GGATC 2 cut(s) 632, 700
AoxI GGCC 2 cut(s) 218, 396
ApaLI GTGCAC 3 cut(s) 382, 806, 1231
ApeKI GCWGC 2 cut(s) 278, 831
ApoI RAATTY 1 cut(s) 230
AspLEI GCGC 1 cut(s) 518
AspS9I GGNCC 1 cut(s) 893
AsuC2I CCSGG 1 cut(s) 192
AsuHPI GGTGA 1 cut(s) 1087
AvaII GGWCC 1 cut(s) 893
AxyI CCTNAGG 1 cut(s) 924
BaeGI GKGCMC 3 cut(s) 386, 810, 1235
BanI GGYRCC 1 cut(s) 836
BbsI GAAGAC 1 cut(s) 1230
Bbv12I GWGCWC 3 cut(s) 386, 810, 1235
BbvI GCAGC 2 cut(s) 265, 818
BccI CCATC 1 cut(s) 819
BciT130I CCWGG 3 cut(s) 421, 513, 779
BcnI CCSGG 1 cut(s) 192
BfaI CTAG 3 cut(s) 611, 1097, 1160
BfoI RGCGCY 1 cut(s) 519
BisI GCNGC 4 cut(s) 279, 832, 835, 1131
BlpI GCTNAGC 1 cut(s) 173
BlsI GCNGC 4 cut(s) 280, 833, 836, 1132
Bme1390I CCNGG 4 cut(s) 192, 421, 513, 779
Bme18I GGWCC 1 cut(s) 893
BmgT120I GGNCC 1 cut(s) 893
BmiI GGNNCC 2 cut(s) 838, 894
BmrFI CCNGG 4 cut(s) 192, 421, 513, 779
BmsI GCATC 2 cut(s) 106, 977
BpiI GAAGAC 1 cut(s) 1230
BpmI CTGGAG 1 cut(s) 926
Bpu1102I GCTNAGC 1 cut(s) 173
BpuMI CCSGG 1 cut(s) 192
BsaJI CCNNGG 2 cut(s) 20, 777
Bsc4I CCNNNNNNNGG 4 cut(s) 26, 512, 925, 1062
Bse1I ACTGG 1 cut(s) 1010
Bse21I CCTNAGG 1 cut(s) 924
BseBI CCWGG 3 cut(s) 421, 513, 779
BseDI CCNNGG 2 cut(s) 20, 777
BseGI GGATG 2 cut(s) 773, 968
BseLI CCNNNNNNNGG 4 cut(s) 26, 512, 925, 1062
BseMII CTCAG 1 cut(s) 938
BseNI ACTGG 1 cut(s) 1010
BseRI GAGGAG 2 cut(s) 312, 986
BseSI GKGCMC 3 cut(s) 386, 810, 1235
BseXI GCAGC 2 cut(s) 265, 818
BseYI CCCAGC 1 cut(s) 910
Bsh1285I CGRYCG 1 cut(s) 191
BshFI GGCC 2 cut(s) 220, 398
BshNI GGYRCC 1 cut(s) 836
BsiEI CGRYCG 1 cut(s) 191
BsiHKAI GWGCWC 3 cut(s) 386, 810, 1235
BsiSI CCGG 1 cut(s) 191
BslFI GGGAC 3 cut(s) 148, 301, 902
BslI CCNNNNNNNGG 4 cut(s) 26, 512, 925, 1062
BsmFI GGGAC 3 cut(s) 148, 301, 902
BsnI GGCC 2 cut(s) 220, 398
Bsp1286I GDGCHC 3 cut(s) 386, 810, 1235
Bsp143I GATC 2 cut(s) 624, 705
Bsp1720I GCTNAGC 1 cut(s) 173
Bsp19I CCATGG 1 cut(s) 20
BspACI CCGC 2 cut(s) 834, 1131
BspANI GGCC 2 cut(s) 220, 398
BspCNI CTCAG 1 cut(s) 937
BspLI GGNNCC 2 cut(s) 838, 894
BspPI GGATC 2 cut(s) 632, 700
BspT107I GGYRCC 1 cut(s) 836
BsrI ACTGG 1 cut(s) 1010
BssECI CCNNGG 2 cut(s) 20, 777
BssMI GATC 2 cut(s) 624, 705
BssT1I CCWWGG 1 cut(s) 20
Bst2UI CCWGG 3 cut(s) 421, 513, 779
Bst4CI ACNGT 3 cut(s) 131, 292, 750
Bst6I CTCTTC 1 cut(s) 1185
BstC8I GCNNGC 2 cut(s) 636, 1045
BstDEI CTNAG 4 cut(s) 173, 393, 651, 924
BstDSI CCRYGG 1 cut(s) 20
BstF5I GGATG 2 cut(s) 773, 968
BstH2I RGCGCY 1 cut(s) 519
BstHHI GCGC 1 cut(s) 518
BstKTI GATC 2 cut(s) 627, 708
BstMBI GATC 2 cut(s) 624, 705
BstMCI CGRYCG 1 cut(s) 191
BstMWI GCNNNNNNNGC 3 cut(s) 640, 722, 950
BstNI CCWGG 3 cut(s) 421, 513, 779
BstNSI RCATGY 2 cut(s) 1073, 1231
BstSCI CCNGG 4 cut(s) 190, 419, 511, 777
BstSLI GKGCMC 3 cut(s) 386, 810, 1235
BstV1I GCAGC 2 cut(s) 265, 818
BstV2I GAAGAC 1 cut(s) 1230
BstX2I RGATCY 2 cut(s) 624, 705
BstYI RGATCY 2 cut(s) 624, 705
Bsu36I CCTNAGG 1 cut(s) 924
BsuRI GGCC 2 cut(s) 220, 398
BtgI CCRYGG 1 cut(s) 20
BtsCI GGATG 2 cut(s) 773, 968
BtsIMutI CAGTG 2 cut(s) 136, 1153
Cac8I GCNNGC 2 cut(s) 636, 1045
CfoI GCGC 1 cut(s) 518
Cfr13I GGNCC 1 cut(s) 893
CseI GACGC 1 cut(s) 1095
Csp6I GTAC 1 cut(s) 751
CviAII CATG 5 cut(s) 21, 700, 955, 1070, 1228
CviQI GTAC 1 cut(s) 751
DdeI CTNAG 4 cut(s) 173, 393, 651, 924
DpnI GATC 2 cut(s) 626, 707
DpnII GATC 2 cut(s) 624, 705
DraI TTTAAA 1 cut(s) 162
DraIII CACNNNGTG 1 cut(s) 1163
Eam1104I CTCTTC 1 cut(s) 1185
EarI CTCTTC 1 cut(s) 1185
Eco130I CCWWGG 1 cut(s) 20
Eco147I AGGCCT 1 cut(s) 398
Eco47I GGWCC 1 cut(s) 893
Eco57I CTGAAG 1 cut(s) 461
Eco81I CCTNAGG 1 cut(s) 924
EcoO109I RGGNCCY 1 cut(s) 893
EcoRII CCWGG 3 cut(s) 419, 511, 777
EcoT14I CCWWGG 1 cut(s) 20
ErhI CCWWGG 1 cut(s) 20
FaeI CATG 5 cut(s) 24, 703, 958, 1073, 1231
FalI AAGNNNNNCTT 2 cut(s) 386, 418
FaqI GGGAC 3 cut(s) 148, 301, 902
FatI CATG 5 cut(s) 20, 699, 954, 1069, 1227
Fnu4HI GCNGC 4 cut(s) 279, 832, 835, 1131
FokI GGATG 2 cut(s) 760, 955
Fsp4HI GCNGC 4 cut(s) 279, 832, 835, 1131
FspBI CTAG 3 cut(s) 611, 1097, 1160
GlaI GCGC 1 cut(s) 517
GluI GCNGC 4 cut(s) 279, 832, 835, 1131
GsaI CCCAGC 1 cut(s) 914
GsuI CTGGAG 1 cut(s) 926
HaeII RGCGCY 1 cut(s) 519
HaeIII GGCC 2 cut(s) 220, 398
HapII CCGG 1 cut(s) 191
HgaI GACGC 1 cut(s) 1095
HhaI GCGC 1 cut(s) 518
Hin1II CATG 5 cut(s) 24, 703, 958, 1073, 1231
Hin6I GCGC 1 cut(s) 516
HinP1I GCGC 1 cut(s) 516
HindIII AAGCTT 1 cut(s) 175
HinfI GANTC 4 cut(s) 267, 416, 551, 915
HpaII CCGG 1 cut(s) 191
HphI GGTGA 1 cut(s) 1087
Hpy166II GTNNAC 4 cut(s) 92, 384, 808, 1233
Hpy188I TCNGA 1 cut(s) 541
Hpy188III TCNNGA 2 cut(s) 622, 905
Hpy8I GTNNAC 4 cut(s) 92, 384, 808, 1233
HpyAV CCTTC 3 cut(s) 409, 439, 589
HpyCH4III ACNGT 3 cut(s) 131, 292, 750
HpyCH4IV ACGT 1 cut(s) 1003
HpyCH4V TGCA 8 cut(s) 384, 466, 643, 703, 808, 968, 1151, 1233
HpyF10VI GCNNNNNNNGC 3 cut(s) 640, 722, 950
HpyF3I CTNAG 4 cut(s) 173, 393, 651, 924
HpySE526I ACGT 1 cut(s) 1003
Hsp92II CATG 5 cut(s) 24, 703, 958, 1073, 1231
HspAI GCGC 1 cut(s) 516
Kzo9I GATC 2 cut(s) 624, 705
LmnI GCTCC 5 cut(s) 275, 523, 598, 722, 907
Lsp1109I GCAGC 2 cut(s) 265, 818
LweI GCATC 2 cut(s) 106, 977
MaeI CTAG 3 cut(s) 611, 1097, 1160
MaeII ACGT 1 cut(s) 1003
MalI GATC 2 cut(s) 626, 707
MboI GATC 2 cut(s) 624, 705
MboII GAAGA 6 cut(s) 394, 454, 500, 1111, 1202, 1235
MflI RGATCY 2 cut(s) 624, 705
MhlI GDGCHC 3 cut(s) 386, 810, 1235
MluCI AATT 5 cut(s) 230, 243, 261, 796, 1113
MlyI GAGTC 3 cut(s) 425, 560, 924
MmeI TCCRAC 3 cut(s) 133, 218, 545
MseI TTAA 4 cut(s) 161, 629, 1089, 1237
MspI CCGG 1 cut(s) 191
MspR9I CCNGG 4 cut(s) 192, 421, 513, 779
MvaI CCWGG 3 cut(s) 421, 513, 779
MwoI GCNNNNNNNGC 3 cut(s) 640, 722, 950
NciI CCSGG 1 cut(s) 192
NcoI CCATGG 1 cut(s) 20
NdeII GATC 2 cut(s) 624, 705
NlaIII CATG 5 cut(s) 24, 703, 958, 1073, 1231
NlaIV GGNNCC 2 cut(s) 838, 894
NspI RCATGY 2 cut(s) 1073, 1231
PceI AGGCCT 1 cut(s) 398
PciI ACATGT 2 cut(s) 1069, 1227
PfeI GAWTC 1 cut(s) 267
PflFI GACNNNGTC 1 cut(s) 192
PflMI CCANNNNNTGG 1 cut(s) 26
PfoI TCCNGGA 1 cut(s) 419
PkrI GCNGC 4 cut(s) 280, 833, 836, 1132
PleI GAGTC 3 cut(s) 424, 559, 923
PpsI GAGTC 3 cut(s) 424, 559, 923
PpuMI RGGWCCY 1 cut(s) 893
PscI ACATGT 2 cut(s) 1069, 1227
Psp1406I AACGTT 1 cut(s) 1003
Psp5II RGGWCCY 1 cut(s) 893
Psp6I CCWGG 3 cut(s) 419, 511, 777
PspFI CCCAGC 1 cut(s) 910
PspGI CCWGG 3 cut(s) 419, 511, 777
PspN4I GGNNCC 2 cut(s) 838, 894
PspPI GGNCC 1 cut(s) 893
PspPPI RGGWCCY 1 cut(s) 893
PsuI RGATCY 2 cut(s) 624, 705
PsyI GACNNNGTC 1 cut(s) 192
RsaI GTAC 1 cut(s) 752
RsaNI GTAC 1 cut(s) 751
SaqAI TTAA 4 cut(s) 161, 629, 1089, 1237
SatI GCNGC 4 cut(s) 279, 832, 835, 1131
Sau3AI GATC 2 cut(s) 624, 705
Sau96I GGNCC 1 cut(s) 893
SchI GAGTC 3 cut(s) 425, 560, 924
ScrFI CCNGG 4 cut(s) 192, 421, 513, 779
SduI GDGCHC 3 cut(s) 386, 810, 1235
SfaNI GCATC 2 cut(s) 106, 977
SinI GGWCC 1 cut(s) 893
SmlI CTYRAG 1 cut(s) 6
SmoI CTYRAG 1 cut(s) 6
Sse9I AATT 5 cut(s) 230, 243, 261, 796, 1113
SseBI AGGCCT 1 cut(s) 398
SsiI CCGC 2 cut(s) 834, 1131
SspI AATATT 1 cut(s) 586
SspMI CTAG 3 cut(s) 611, 1097, 1160
StuI AGGCCT 1 cut(s) 398
StyD4I CCNGG 4 cut(s) 190, 419, 511, 777
StyI CCWWGG 1 cut(s) 20
TaaI ACNGT 3 cut(s) 131, 292, 750
TaiI ACGT 1 cut(s) 1006
TaqI TCGA 4 cut(s) 196, 351, 377, 932
TasI AATT 5 cut(s) 230, 243, 261, 796, 1113
TatI WGTACW 1 cut(s) 750
TauI GCSGC 2 cut(s) 837, 1133
TfiI GAWTC 1 cut(s) 267
Tru1I TTAA 4 cut(s) 161, 629, 1089, 1237
Tru9I TTAA 4 cut(s) 161, 629, 1089, 1237
TscAI CASTG 2 cut(s) 136, 1153
TseI GCWGC 2 cut(s) 278, 831
TspDTI ATGAA 5 cut(s) 259, 720, 762, 874, 1111
TspRI CASTG 2 cut(s) 136, 1153
Tth111I GACNNNGTC 1 cut(s) 192
Van91I CCANNNNNTGG 1 cut(s) 26
VneI GTGCAC 3 cut(s) 382, 806, 1231
VpaK11BI GGWCC 1 cut(s) 893
XapI RAATTY 1 cut(s) 230
XceI RCATGY 2 cut(s) 1073, 1231
XspI CTAG 3 cut(s) 611, 1097, 1160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.