Rmu_sc0001803.1_g000022

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001803.1
OG0000447
Physical Location & Seq
Forward (+)
65579 .. 66709
1131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001803.1_g000022.1.cds

Sequence Viewer

Length: 573 bp
atgacatattggtcgacagaactcttacagattccggtggctgtgggagtaacttcatatcaggcaatgaatctctacagagggcgtagtgtgattgcatcgaagggggaagcaaacatgaaatggtcactgtacaagctagttgcctattgtgcatgtggagtagcagctggtatgcttggtggattacttggtcttggtggagcatttctgttgggtccgatatttttggagatgggaatccctcctcaggtgtcaagtgctacggccacctttgctatgacattttcttcatccatgtctgttgtagaatactatctccttaaacgcttcccaattccttatgctctctacttcgctgctgtgactactgtctctgcatttgcggggcaacatgtggccggaaaggtggttaagaaattaggaagagcttctttgattatctttatcctggcgttcacagtttttgtgagttcactaacactaggtgggatcggcatagaaaacatgattaggaagattcaacacaaggagtccttgggattccagaacatctgcacttataaaacctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

190

Amino Acids

20.47

Weight (kDa)

9.59

Isoelectric Point (pI)

34.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 564
AasI GACNNNNNNGTC 1 cut(s) 10
AccI GTMKAC 1 cut(s) 14
AciI CCGC 1 cut(s) 386
AclWI GGATC 1 cut(s) 500
AcoI YGGCCR 2 cut(s) 267, 399
AdeI CACNNNGTG 1 cut(s) 488
AfaI GTAC 1 cut(s) 134
AfiI CCNNNNNNNGG 1 cut(s) 250
AflIII ACRYGT 1 cut(s) 394
AgsI TTSAA 1 cut(s) 524
AjnI CCWGG 1 cut(s) 450
AluBI AGCT 3 cut(s) 139, 170, 431
AluI AGCT 3 cut(s) 139, 170, 431
Alw26I GTCTC 1 cut(s) 379
AlwI GGATC 1 cut(s) 500
AoxI GGCC 2 cut(s) 267, 399
ApeKI GCWGC 2 cut(s) 167, 359
Asp700I GAANNNNTTC 1 cut(s) 430
AspS9I GGNCC 1 cut(s) 218
AvaII GGWCC 1 cut(s) 218
AxyI CCTNAGG 1 cut(s) 249
BbvI GCAGC 2 cut(s) 179, 346
BccI CCATC 1 cut(s) 229
BceAI ACGGC 1 cut(s) 282
BciT130I CCWGG 1 cut(s) 452
BcoDI GTCTC 1 cut(s) 379
BfaI CTAG 3 cut(s) 140, 485, 571
BfmI CTRYAG 1 cut(s) 76
BisI GCNGC 2 cut(s) 168, 360
BlsI GCNGC 2 cut(s) 169, 361
Bme1390I CCNGG 1 cut(s) 452
Bme18I GGWCC 1 cut(s) 218
BmgT120I GGNCC 1 cut(s) 218
BmiI GGNNCC 1 cut(s) 219
BmrFI CCNGG 1 cut(s) 452
BmsI GCATC 1 cut(s) 107
BoxI GACNNNNGTC 1 cut(s) 371
BsaBI GATNNNNATC 1 cut(s) 239
BsaJI CCNNGG 1 cut(s) 537
BsaWI WCCGGW 1 cut(s) 34
Bsc4I CCNNNNNNNGG 1 cut(s) 250
Bse21I CCTNAGG 1 cut(s) 249
Bse3DI GCAATG 1 cut(s) 72
Bse8I GATNNNNATC 1 cut(s) 239
BseBI CCWGG 1 cut(s) 452
BseDI CCNNGG 1 cut(s) 537
BseGI GGATG 1 cut(s) 293
BseJI GATNNNNATC 1 cut(s) 239
BseLI CCNNNNNNNGG 1 cut(s) 250
BseMI GCAATG 1 cut(s) 72
BseMII CTCAG 1 cut(s) 263
BseRI GAGGAG 1 cut(s) 237
BseXI GCAGC 2 cut(s) 179, 346
BsgI GTGCAG 1 cut(s) 541
BshFI GGCC 2 cut(s) 269, 401
BsiSI CCGG 2 cut(s) 35, 402
BslI CCNNNNNNNGG 1 cut(s) 250
BsmAI GTCTC 1 cut(s) 379
BsnI GGCC 2 cut(s) 269, 401
Bsp1407I TGTACA 1 cut(s) 132
Bsp143I GATC 1 cut(s) 492
BspACI CCGC 1 cut(s) 386
BspANI GGCC 2 cut(s) 269, 401
BspCNI CTCAG 1 cut(s) 262
BspLI GGNNCC 1 cut(s) 219
BspPI GGATC 1 cut(s) 500
BspQI GCTCTTC 1 cut(s) 421
BsrDI GCAATG 1 cut(s) 72
BsrGI TGTACA 1 cut(s) 132
BssECI CCNNGG 1 cut(s) 537
BssMI GATC 1 cut(s) 492
BssT1I CCWWGG 1 cut(s) 537
Bst2UI CCWGG 1 cut(s) 452
Bst4CI ACNGT 3 cut(s) 132, 373, 463
Bst6I CTCTTC 1 cut(s) 421
BstAUI TGTACA 1 cut(s) 132
BstDEI CTNAG 1 cut(s) 249
BstF5I GGATG 1 cut(s) 293
BstKTI GATC 1 cut(s) 495
BstMAI GTCTC 1 cut(s) 379
BstMBI GATC 1 cut(s) 492
BstMWI GCNNNNNNNGC 2 cut(s) 152, 275
BstNI CCWGG 1 cut(s) 452
BstNSI RCATGY 2 cut(s) 159, 398
BstPAI GACNNNNGTC 1 cut(s) 371
BstSCI CCNGG 1 cut(s) 450
BstSFI CTRYAG 1 cut(s) 76
BstV1I GCAGC 2 cut(s) 179, 346
Bsu36I CCTNAGG 1 cut(s) 249
BsuRI GGCC 2 cut(s) 269, 401
BtsCI GGATG 1 cut(s) 293
BtsIMutI CAGTG 1 cut(s) 128
Cfr13I GGNCC 1 cut(s) 218
Csp6I GTAC 1 cut(s) 133
CviAII CATG 5 cut(s) 118, 156, 298, 395, 508
CviJI RGCY 6 cut(s) 41, 139, 170, 269, 401, 431
CviKI_1 RGCY 6 cut(s) 41, 139, 170, 269, 401, 431
CviQI GTAC 1 cut(s) 133
DdeI CTNAG 1 cut(s) 249
DpnI GATC 1 cut(s) 494
DpnII GATC 1 cut(s) 492
DraIII CACNNNGTG 1 cut(s) 488
DrdI GACNNNNNNGTC 1 cut(s) 10
DseDI GACNNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 2 cut(s) 267, 399
Eam1104I CTCTTC 1 cut(s) 421
EarI CTCTTC 1 cut(s) 421
Eco130I CCWWGG 1 cut(s) 537
Eco47I GGWCC 1 cut(s) 218
Eco81I CCTNAGG 1 cut(s) 249
EcoRII CCWGG 1 cut(s) 450
EcoT14I CCWWGG 1 cut(s) 537
ErhI CCWWGG 1 cut(s) 537
FaeI CATG 5 cut(s) 121, 159, 301, 398, 511
FalI AAGNNNNNCTT 4 cut(s) 418, 450, 521, 553
FatI CATG 5 cut(s) 117, 155, 297, 394, 507
FauI CCCGC 1 cut(s) 379
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 2 cut(s) 168, 360
FokI GGATG 1 cut(s) 280
Fsp4HI GCNGC 2 cut(s) 168, 360
FspBI CTAG 3 cut(s) 140, 485, 571
GluI GCNGC 2 cut(s) 168, 360
HaeIII GGCC 2 cut(s) 269, 401
HapII CCGG 2 cut(s) 35, 402
Hin1II CATG 5 cut(s) 121, 159, 301, 398, 511
HincII GTYRAC 1 cut(s) 15
HindII GTYRAC 1 cut(s) 15
HinfI GANTC 6 cut(s) 31, 70, 240, 520, 533, 543
HpaII CCGG 2 cut(s) 35, 402
Hpy166II GTNNAC 3 cut(s) 15, 459, 476
Hpy188I TCNGA 1 cut(s) 222
Hpy188III TCNNGA 1 cut(s) 547
Hpy8I GTNNAC 3 cut(s) 15, 459, 476
HpyAV CCTTC 1 cut(s) 97
HpyCH4III ACNGT 3 cut(s) 132, 373, 463
HpyCH4V TGCA 4 cut(s) 98, 155, 380, 558
HpyF10VI GCNNNNNNNGC 2 cut(s) 152, 275
HpyF3I CTNAG 1 cut(s) 249
Hsp92II CATG 5 cut(s) 121, 159, 301, 398, 511
Kzo9I GATC 1 cut(s) 492
LguI GCTCTTC 1 cut(s) 421
LmnI GCTCC 1 cut(s) 203
LpnPI CCDG 8 cut(s) 47, 48, 156, 236, 415, 437, 464, 560
Lsp1109I GCAGC 2 cut(s) 179, 346
LweI GCATC 1 cut(s) 107
MaeI CTAG 3 cut(s) 140, 485, 571
MaeIII GTNAC 3 cut(s) 49, 126, 364
MalI GATC 1 cut(s) 494
MboI GATC 1 cut(s) 492
MboII GAAGA 3 cut(s) 282, 438, 529
MluCI AATT 2 cut(s) 336, 419
MlyI GAGTC 1 cut(s) 542
MnlI CCTC 3 cut(s) 74, 255, 258
MroXI GAANNNNTTC 1 cut(s) 430
MseI TTAA 2 cut(s) 324, 414
MspA1I CMGCKG 1 cut(s) 170
MspI CCGG 2 cut(s) 35, 402
MspR9I CCNGG 1 cut(s) 452
MvaI CCWGG 1 cut(s) 452
MwoI GCNNNNNNNGC 2 cut(s) 152, 275
NdeII GATC 1 cut(s) 492
NlaIII CATG 5 cut(s) 121, 159, 301, 398, 511
NlaIV GGNNCC 1 cut(s) 219
NmuCI GTSAC 2 cut(s) 126, 364
NspI RCATGY 2 cut(s) 159, 398
PciI ACATGT 1 cut(s) 394
PciSI GCTCTTC 1 cut(s) 421
PdmI GAANNNNTTC 1 cut(s) 430
PfeI GAWTC 5 cut(s) 31, 70, 240, 520, 543
PkrI GCNGC 2 cut(s) 169, 361
PleI GAGTC 1 cut(s) 541
PpsI GAGTC 1 cut(s) 541
PscI ACATGT 1 cut(s) 394
PshAI GACNNNNGTC 1 cut(s) 371
PsiI TTATAA 1 cut(s) 564
Psp6I CCWGG 1 cut(s) 450
PspGI CCWGG 1 cut(s) 450
PspN4I GGNNCC 1 cut(s) 219
PspPI GGNCC 1 cut(s) 218
PvuII CAGCTG 1 cut(s) 170
RsaI GTAC 1 cut(s) 134
RsaNI GTAC 1 cut(s) 133
SalI GTCGAC 1 cut(s) 13
SapI GCTCTTC 1 cut(s) 421
SaqAI TTAA 2 cut(s) 324, 414
SatI GCNGC 2 cut(s) 168, 360
Sau3AI GATC 1 cut(s) 492
Sau96I GGNCC 1 cut(s) 218
SchI GAGTC 1 cut(s) 542
ScrFI CCNGG 1 cut(s) 452
SetI ASST 8 cut(s) 141, 172, 255, 275, 411, 433, 490, 572
SfaNI GCATC 1 cut(s) 107
SfcI CTRYAG 1 cut(s) 76
SinI GGWCC 1 cut(s) 218
Sse9I AATT 2 cut(s) 336, 419
SsiI CCGC 1 cut(s) 386
SspMI CTAG 3 cut(s) 140, 485, 571
StyD4I CCNGG 1 cut(s) 450
StyI CCWWGG 1 cut(s) 537
TaaI ACNGT 3 cut(s) 132, 373, 463
TaqI TCGA 2 cut(s) 14, 101
TasI AATT 2 cut(s) 336, 419
TatI WGTACW 1 cut(s) 132
TfiI GAWTC 5 cut(s) 31, 70, 240, 520, 543
Tru1I TTAA 2 cut(s) 324, 414
Tru9I TTAA 2 cut(s) 324, 414
TscAI CASTG 1 cut(s) 135
TseFI GTSAC 2 cut(s) 126, 364
TseI GCWGC 2 cut(s) 167, 359
Tsp45I GTSAC 2 cut(s) 126, 364
TspDTI ATGAA 4 cut(s) 45, 83, 134, 282
TspRI CASTG 1 cut(s) 135
VpaK11BI GGWCC 1 cut(s) 218
XceI RCATGY 2 cut(s) 159, 398
XmiI GTMKAC 1 cut(s) 14
XmnI GAANNNNTTC 1 cut(s) 430
XspI CTAG 3 cut(s) 140, 485, 571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.