Rh6CG469500

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000447
Physical Location & Seq
Forward (+)
64076458 .. 64080164
3707 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG469500.1

Sequence Viewer

Length: 1428 bp
ATGGCGGTGTTCGGAGCAAAATGGCAGGGTGTGAGATCCATGTGCATGATATTGTTCAACTTTGCGGTTGCTTTTGTATTTGTTAAGGCCGAGAGAGGGCTCAGGCTCGAAAGCTCGAGGTTCGATGGAGCAAAGGGATCTGTTTCCGGCAATGATTATCTTTTCCGAGCTGTAAATTTCCTATGGCAATCGGATAAAGTGGGATACGAACACGTTTGGCCGGAGATGAAGTTCGGATGGGAAATTGTTGTGGGGAGTGCTATTGGATTCTTTGGAGCAGCGTTCGGGAGTGTCGGCGGTGTAGGTGGTGGTGGCATTTTTGTTCCCATGCTTAACCTGATTGTTGGGTTTGATCCAAAGTCGGCAACAGCTATATCGAAATGTATGATCATGGGTGCAGCTGCCTCAACTGTTTACTATAATCTCAAGCTAAGGCACCCCACGCTAGATATGCCGATTATCGACTATGATTTGGCAGTACTTATCCAACCGATGCTCATGATGGGAATTAGTATAGGAGTGGCATTCAATGTGATCTTTGCTGACTGGATGGTCACAGTTTTGCTTATTGTTCTTTTTATAGGCACATCAACAAAAGCATTCTTCAAGGGTGTTGATACATGGAAAAAGGAAACTATTATGAAAAGGGAAGCCGCAAAGCGACTGGAGTCAAATGGATCTGGTGTTGATGCAGAATACAAGCCTCTTCCAGCTGGCCCAAAAAATGACCAACAAAAGGAGCCAGAGGTCTCTTTTGTGGAGAATGTTTACTGGAAAGAGTTTGGACTTCTGGTTTTTGTCTGGGTCGCATTTCTTGCACTGCAAATTGCCAAGCATCACACATCTACTTGTTCGACAGCCTATTGGATAGTGAATTTGTTACAGATCCCAGTTTCTTTAGGTGTATCTACGTATGAGGCAGTTGGCCTATACAAGGGACGGAAAGTAAGAGCATCTAAGGGAGAGGAAGGGACAAATTGGCGAGTGCACCAGCTGATTTCCTACTGTCTTATGGGTGTCGTTGCAGGAATTGTAGGAGGATTGCTTGGACTAGGTGGAGGATTCATTATGGGTCCACTTTTTTTGGAGCTCGGACTCCCCCCTCAGGTCTCCAGTGCCACAGCTACCTTTGCAATGATGTTCTCATCCTCTATGTCTGTTGTAGAATACTACCTTCTAAAACGATTTCCAGTTCCTTATGCTGCTTACTATACAGCTGTGGCTACCATTGCGGCCATTATAGGACAGCATGTTGTGAGGAGGATGATCACGATCTTTGGGAGGGCATCATTGATCATTTTCATTCTAGCTTTTATGATTTTCGTCAGTGCAATCTCACTCGGTGGGGTTGGCATATCGAACATGATTTGGAAGATAAACCACAATGAATACATGGGTTTCGAAAACCTTTGCAAGTATGATGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

475

Amino Acids

52.08

Weight (kDa)

9.05

Isoelectric Point (pI)

27.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 87 - 203 7.1e-11 Sulfite exporter TauE/SafE
TauE PF01925 336 - 442 2.8e-12 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 551
AccB1I GGYRCC 1 cut(s) 435
AciI CCGC 5 cut(s) 5, 65, 297, 654, 1232
AclWI GGATC 5 cut(s) 30, 145, 347, 685, 880
AcoI YGGCCR 2 cut(s) 218, 1233
AcsI RAATTY 2 cut(s) 175, 874
AdeI CACNNNGTG 1 cut(s) 1343
AfaI GTAC 1 cut(s) 480
AfiI CCNNNNNNNGG 4 cut(s) 96, 736, 934, 1105
AflIII ACRYGT 1 cut(s) 211
AgsI TTSAA 3 cut(s) 58, 529, 607
AloI GAACNNNNNNTCC 2 cut(s) 215, 247
Alw21I GWGCWC 2 cut(s) 990, 1092
Alw26I GTCTC 2 cut(s) 754, 1114
Alw44I GTGCAC 1 cut(s) 986
AlwI GGATC 5 cut(s) 30, 145, 347, 685, 880
Ama87I CYCGRG 1 cut(s) 115
AoxI GGCC 5 cut(s) 87, 218, 715, 925, 1233
ApaLI GTGCAC 1 cut(s) 986
ApeKI GCWGC 4 cut(s) 278, 398, 401, 1202
ApoI RAATTY 2 cut(s) 175, 874
AspS9I GGNCC 2 cut(s) 716, 1073
AsuII TTCGAA 1 cut(s) 1401
AvaI CYCGRG 1 cut(s) 115
AvaII GGWCC 1 cut(s) 1073
AxyI CCTNAGG 1 cut(s) 1104
BaeGI GKGCMC 1 cut(s) 990
BanI GGYRCC 1 cut(s) 435
BanII GRGCYC 2 cut(s) 102, 1092
Bbv12I GWGCWC 2 cut(s) 990, 1092
BbvI GCAGC 4 cut(s) 290, 388, 410, 1189
BccI CCATC 5 cut(s) 119, 231, 496, 544, 1415
BciVI GTATCC 1 cut(s) 197
BclI TGATCA 3 cut(s) 387, 1266, 1293
BcoDI GTCTC 2 cut(s) 754, 1114
BfaI CTAG 3 cut(s) 446, 1052, 1307
BfuI GTATCC 1 cut(s) 197
BisI GCNGC 6 cut(s) 279, 399, 402, 654, 1203, 1233
BlsI GCNGC 6 cut(s) 280, 400, 403, 655, 1204, 1234
BmcAI AGTACT 1 cut(s) 480
Bme18I GGWCC 1 cut(s) 1073
BmeT110I CYCGRG 1 cut(s) 115
BmgT120I GGNCC 2 cut(s) 716, 1073
BmiI GGNNCC 3 cut(s) 437, 741, 1074
BmrI ACTGGG 1 cut(s) 884
BmsI GCATC 5 cut(s) 483, 679, 844, 962, 1295
BmuI ACTGGG 1 cut(s) 884
BoxI GACNNNNGTC 1 cut(s) 667
BpmI CTGGAG 2 cut(s) 686, 1096
Bpu10I CCTNAGC 2 cut(s) 101, 431
Bpu14I TTCGAA 1 cut(s) 1401
BpuEI CTTGAG 1 cut(s) 410
BsaAI YACGTR 1 cut(s) 912
BsaBI GATNNNNATC 1 cut(s) 1271
BsaI GGTCTC 2 cut(s) 754, 1114
BsaXI ACNNNNNCTCC 2 cut(s) 215, 245
Bsc4I CCNNNNNNNGG 4 cut(s) 96, 736, 934, 1105
Bse1I ACTGG 6 cut(s) 551, 669, 776, 890, 1113, 1190
Bse21I CCTNAGG 1 cut(s) 1104
Bse3DI GCAATG 3 cut(s) 157, 1140, 1227
Bse8I GATNNNNATC 1 cut(s) 1271
BseGI GGATG 4 cut(s) 242, 555, 1145, 1269
BseJI GATNNNNATC 1 cut(s) 1271
BseLI CCNNNNNNNGG 4 cut(s) 96, 736, 934, 1105
BseMI GCAATG 3 cut(s) 157, 1140, 1227
BseMII CTCAG 2 cut(s) 115, 1118
BseNI ACTGG 6 cut(s) 551, 669, 776, 890, 1113, 1190
BseRI GAGGAG 1 cut(s) 1273
BseSI GKGCMC 1 cut(s) 990
BseXI GCAGC 4 cut(s) 290, 388, 410, 1189
BsgI GTGCAG 1 cut(s) 417
BshFI GGCC 5 cut(s) 89, 220, 717, 927, 1235
BshNI GGYRCC 1 cut(s) 435
BsiHKAI GWGCWC 2 cut(s) 990, 1092
BsiHKCI CYCGRG 1 cut(s) 115
BsiSI CCGG 2 cut(s) 147, 221
BslFI GGGAC 2 cut(s) 951, 985
BslI CCNNNNNNNGG 4 cut(s) 96, 736, 934, 1105
BsmAI GTCTC 2 cut(s) 754, 1114
BsmFI GGGAC 2 cut(s) 951, 985
BsmI GAATGC 2 cut(s) 524, 599
BsnI GGCC 5 cut(s) 89, 220, 717, 927, 1235
Bso31I GGTCTC 2 cut(s) 754, 1114
BsoBI CYCGRG 1 cut(s) 115
Bsp119I TTCGAA 1 cut(s) 1401
Bsp1286I GDGCHC 3 cut(s) 102, 990, 1092
BspACI CCGC 5 cut(s) 5, 65, 297, 654, 1232
BspANI GGCC 5 cut(s) 89, 220, 717, 927, 1235
BspCNI CTCAG 2 cut(s) 114, 1117
BspHI TCATGA 1 cut(s) 498
BspLI GGNNCC 3 cut(s) 437, 741, 1074
BspPI GGATC 5 cut(s) 30, 145, 347, 685, 880
BspT104I TTCGAA 1 cut(s) 1401
BspT107I GGYRCC 1 cut(s) 435
BspTNI GGTCTC 2 cut(s) 754, 1114
BsrDI GCAATG 3 cut(s) 157, 1140, 1227
BsrI ACTGG 6 cut(s) 551, 669, 776, 890, 1113, 1190
Bst4CI ACNGT 3 cut(s) 412, 559, 1007
Bst6I CTCTTC 1 cut(s) 711
BstAPI GCANNNNNTGC 1 cut(s) 815
BstBAI YACGTR 1 cut(s) 912
BstBI TTCGAA 1 cut(s) 1401
BstC8I GCNNGC 1 cut(s) 715
BstDEI CTNAG 4 cut(s) 101, 431, 957, 1104
BstENI CCTNNNNNAGG 1 cut(s) 932
BstF5I GGATG 4 cut(s) 242, 555, 1145, 1269
BstMAI GTCTC 2 cut(s) 754, 1114
BstMWI GCNNNNNNNGC 5 cut(s) 442, 451, 815, 1130, 1229
BstNSI RCATGY 1 cut(s) 1253
BstPAI GACNNNNGTC 1 cut(s) 667
BstSLI GKGCMC 1 cut(s) 990
BstSNI TACGTA 1 cut(s) 912
BstV1I GCAGC 4 cut(s) 290, 388, 410, 1189
BstX2I RGATCY 4 cut(s) 35, 137, 677, 885
BstYI RGATCY 4 cut(s) 35, 137, 677, 885
Bsu36I CCTNAGG 1 cut(s) 1104
BsuI GTATCC 1 cut(s) 197
BsuRI GGCC 5 cut(s) 89, 220, 717, 927, 1235
BtsCI GGATG 4 cut(s) 242, 555, 1145, 1269
BtsI GCAGTG 1 cut(s) 818
BtsIMutI CAGTG 3 cut(s) 818, 1120, 1333
Cac8I GCNNGC 1 cut(s) 715
CciI TCATGA 1 cut(s) 498
Cfr13I GGNCC 2 cut(s) 716, 1073
Csp6I GTAC 1 cut(s) 479
CspCI CAANNNNNGTGG 2 cut(s) 1065, 1100
CviAII CATG 9 cut(s) 40, 46, 328, 391, 499, 621, 1250, 1363, 1393
CviQI GTAC 1 cut(s) 479
DdeI CTNAG 4 cut(s) 101, 431, 957, 1104
DraIII CACNNNGTG 1 cut(s) 1343
DrdI GACNNNNNNGTC 1 cut(s) 551
DseDI GACNNNNNNGTC 1 cut(s) 551
EaeI YGGCCR 2 cut(s) 218, 1233
Eam1104I CTCTTC 1 cut(s) 711
EarI CTCTTC 1 cut(s) 711
Ecl136II GAGCTC 1 cut(s) 1090
Eco105I TACGTA 1 cut(s) 912
Eco24I GRGCYC 2 cut(s) 102, 1092
Eco31I GGTCTC 2 cut(s) 754, 1114
Eco47I GGWCC 1 cut(s) 1073
Eco53kI GAGCTC 1 cut(s) 1090
Eco81I CCTNAGG 1 cut(s) 1104
Eco88I CYCGRG 1 cut(s) 115
EcoICRI GAGCTC 1 cut(s) 1090
EcoNI CCTNNNNNAGG 1 cut(s) 932
EcoT38I GRGCYC 2 cut(s) 102, 1092
FaeI CATG 9 cut(s) 43, 49, 331, 394, 502, 624, 1253, 1366, 1396
FaqI GGGAC 2 cut(s) 951, 985
FatI CATG 9 cut(s) 39, 45, 327, 390, 498, 620, 1249, 1362, 1392
FbaI TGATCA 3 cut(s) 387, 1266, 1293
Fnu4HI GCNGC 6 cut(s) 279, 399, 402, 654, 1203, 1233
FokI GGATG 4 cut(s) 249, 562, 1132, 1276
FriOI GRGCYC 2 cut(s) 102, 1092
Fsp4HI GCNGC 6 cut(s) 279, 399, 402, 654, 1203, 1233
FspBI CTAG 3 cut(s) 446, 1052, 1307
GluI GCNGC 6 cut(s) 279, 399, 402, 654, 1203, 1233
GsuI CTGGAG 2 cut(s) 686, 1096
HaeIII GGCC 5 cut(s) 89, 220, 717, 927, 1235
HapII CCGG 2 cut(s) 147, 221
Hin1II CATG 9 cut(s) 43, 49, 331, 394, 502, 624, 1253, 1366, 1396
HinfI GANTC 4 cut(s) 267, 668, 1062, 1095
HpaII CCGG 2 cut(s) 147, 221
Hpy166II GTNNAC 4 cut(s) 415, 769, 988, 1076
Hpy188I TCNGA 5 cut(s) 14, 167, 193, 236, 1094
Hpy188III TCNNGA 3 cut(s) 286, 499, 1270
Hpy8I GTNNAC 4 cut(s) 415, 769, 988, 1076
HpyAV CCTTC 2 cut(s) 962, 1184
HpyCH4III ACNGT 3 cut(s) 412, 559, 1007
HpyCH4IV ACGT 2 cut(s) 213, 911
HpyF10VI GCNNNNNNNGC 5 cut(s) 442, 451, 815, 1130, 1229
HpyF3I CTNAG 4 cut(s) 101, 431, 957, 1104
HpySE526I ACGT 2 cut(s) 213, 911
Hsp92II CATG 9 cut(s) 43, 49, 331, 394, 502, 624, 1253, 1366, 1396
Ksp22I TGATCA 3 cut(s) 387, 1266, 1293
LmnI GCTCC 5 cut(s) 14, 128, 275, 739, 1087
Lsp1109I GCAGC 4 cut(s) 290, 388, 410, 1189
LweI GCATC 5 cut(s) 483, 679, 844, 962, 1295
MaeI CTAG 3 cut(s) 446, 1052, 1307
MaeII ACGT 2 cut(s) 213, 911
MaeIII GTNAC 2 cut(s) 553, 879
MboII GAAGA 3 cut(s) 595, 698, 1384
MflI RGATCY 4 cut(s) 35, 137, 677, 885
MhlI GDGCHC 3 cut(s) 102, 990, 1092
MluCI AATT 7 cut(s) 175, 243, 507, 825, 874, 976, 1029
MlyI GAGTC 2 cut(s) 677, 1089
MmeI TCCRAC 1 cut(s) 511
MseI TTAA 2 cut(s) 84, 333
MslI CAYNNNNRTG 1 cut(s) 44
MspA1I CMGCKG 4 cut(s) 401, 713, 994, 1217
MspI CCGG 2 cut(s) 147, 221
Mva1269I GAATGC 2 cut(s) 524, 599
MwoI GCNNNNNNNGC 5 cut(s) 442, 451, 815, 1130, 1229
NlaIII CATG 9 cut(s) 43, 49, 331, 394, 502, 624, 1253, 1366, 1396
NlaIV GGNNCC 3 cut(s) 437, 741, 1074
NmeAIII GCCGAG 1 cut(s) 115
NmuCI GTSAC 1 cut(s) 553
NspI RCATGY 1 cut(s) 1253
NspV TTCGAA 1 cut(s) 1401
PaeR7I CTCGAG 1 cut(s) 115
PagI TCATGA 1 cut(s) 498
PctI GAATGC 2 cut(s) 524, 599
PfeI GAWTC 2 cut(s) 267, 1062
PkrI GCNGC 6 cut(s) 280, 400, 403, 655, 1204, 1234
PleI GAGTC 2 cut(s) 676, 1089
PpsI GAGTC 2 cut(s) 676, 1089
Ppu21I YACGTR 1 cut(s) 912
PshAI GACNNNNGTC 1 cut(s) 667
Psp124BI GAGCTC 1 cut(s) 1092
PspN4I GGNNCC 3 cut(s) 437, 741, 1074
PspPI GGNCC 2 cut(s) 716, 1073
PspXI VCTCGAGB 1 cut(s) 115
PsuI RGATCY 4 cut(s) 35, 137, 677, 885
PvuII CAGCTG 4 cut(s) 401, 713, 994, 1217
RsaI GTAC 1 cut(s) 480
RsaNI GTAC 1 cut(s) 479
RseI CAYNNNNRTG 1 cut(s) 44
SacI GAGCTC 1 cut(s) 1092
SaqAI TTAA 2 cut(s) 84, 333
SatI GCNGC 6 cut(s) 279, 399, 402, 654, 1203, 1233
Sau96I GGNCC 2 cut(s) 716, 1073
ScaI AGTACT 1 cut(s) 480
SchI GAGTC 2 cut(s) 677, 1089
SduI GDGCHC 3 cut(s) 102, 990, 1092
SfaNI GCATC 5 cut(s) 483, 679, 844, 962, 1295
Sfr274I CTCGAG 1 cut(s) 115
SfuI TTCGAA 1 cut(s) 1401
SinI GGWCC 1 cut(s) 1073
SlaI CTCGAG 1 cut(s) 115
SmiMI CAYNNNNRTG 1 cut(s) 44
SmlI CTYRAG 2 cut(s) 115, 425
SmoI CTYRAG 2 cut(s) 115, 425
SnaBI TACGTA 1 cut(s) 912
Sse9I AATT 7 cut(s) 175, 243, 507, 825, 874, 976, 1029
SsiI CCGC 5 cut(s) 5, 65, 297, 654, 1232
SspMI CTAG 3 cut(s) 446, 1052, 1307
SstI GAGCTC 1 cut(s) 1092
TaaI ACNGT 3 cut(s) 412, 559, 1007
TaiI ACGT 2 cut(s) 216, 914
TaqI TCGA 8 cut(s) 108, 116, 123, 377, 462, 854, 1358, 1401
TasI AATT 7 cut(s) 175, 243, 507, 825, 874, 976, 1029
TatI WGTACW 1 cut(s) 478
TauI GCSGC 2 cut(s) 656, 1235
TfiI GAWTC 2 cut(s) 267, 1062
Tru1I TTAA 2 cut(s) 84, 333
Tru9I TTAA 2 cut(s) 84, 333
TscAI CASTG 3 cut(s) 825, 1120, 1333
TseFI GTSAC 1 cut(s) 553
TseI GCWGC 4 cut(s) 278, 398, 401, 1202
Tsp45I GTSAC 1 cut(s) 553
TspDTI ATGAA 5 cut(s) 242, 656, 1054, 1291, 1401
TspGWI ACGGA 1 cut(s) 955
TspRI CASTG 3 cut(s) 825, 1120, 1333
VneI GTGCAC 1 cut(s) 986
VpaK11BI GGWCC 1 cut(s) 1073
XagI CCTNNNNNAGG 1 cut(s) 932
XapI RAATTY 2 cut(s) 175, 874
XceI RCATGY 1 cut(s) 1253
XhoI CTCGAG 1 cut(s) 115
XspI CTAG 3 cut(s) 446, 1052, 1307
ZrmI AGTACT 1 cut(s) 480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.