Rmu_sc0033335.1_g000001

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0033335.1
OG0000447
Physical Location & Seq
Reverse (-)
5858 .. 7267
1410 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0033335.1_g000001.1.cds

Sequence Viewer

Length: 768 bp
atgcaatttggtgtggttctgtccggttgcttaggtatgatcacgggtggagcagctgcaactgttttttacaacttaaggttaaggcatcctactcttgacttgcccatcatcgactatgacctggcgcttcttttccaaccgatgcttatgcttgggattagcattggagtttgcacatcaactaaggccttcttcaagggagttgagtcctggaaaagagaaactatactgaagaaggaagttgccagactaatgcagtcaaatggtaatggtagtcaagaagttgaatacagacctttacctggcgttccaaccaacaattgtctatcagaaacaaatgagtctaaaaggaaagaggtttctattattgagaatatttgctggaaggaacttggacttctagttgttgtctggattttaatgcttgcattgcagattgctaagtattataccacaacttgttcggtagcatattgggtattgaacctcatgcagatccctgtggcttttggagtgagttcatacgaggctgttagactgtactatggacaaagagtgatttcatcccaggaactatcaagcacgaattggaaagtgcaccaacttattctttattgtggctgcggcatcatagctggtatagttggtggtttgcttggacttggtggaggcttcattctgggtcctctttttctggagctgggagtcccacctcaggtaaatattttacttccttttgatattaataagtggaatatttgctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

255

Amino Acids

28.14

Weight (kDa)

8.07

Isoelectric Point (pI)

42.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 627
AclWI GGATC 1 cut(s) 493
AcuI CTGAAG 1 cut(s) 254
AfaI GTAC 1 cut(s) 545
AfiI CCNNNNNNNGG 2 cut(s) 305, 718
AflII CTTAAG 1 cut(s) 76
AgsI TTSAA 3 cut(s) 199, 290, 487
AjnI CCWGG 4 cut(s) 123, 212, 304, 570
AluBI AGCT 3 cut(s) 56, 638, 703
AluI AGCT 3 cut(s) 56, 638, 703
Alw21I GWGCWC 1 cut(s) 603
Alw44I GTGCAC 1 cut(s) 599
AlwI GGATC 1 cut(s) 493
AoxI GGCC 1 cut(s) 189
ApaLI GTGCAC 1 cut(s) 599
ApeKI GCWGC 3 cut(s) 53, 56, 624
AseI ATTAAT 1 cut(s) 747
AspLEI GCGC 1 cut(s) 130
AspS9I GGNCC 1 cut(s) 686
AvaII GGWCC 1 cut(s) 686
AxyI CCTNAGG 1 cut(s) 717
BaeGI GKGCMC 1 cut(s) 603
Bbv12I GWGCWC 1 cut(s) 603
BbvI GCAGC 3 cut(s) 43, 65, 611
BccI CCATC 1 cut(s) 116
BcgI CGANNNNNNTGC 2 cut(s) 133, 167
BciT130I CCWGG 4 cut(s) 125, 214, 306, 572
BclI TGATCA 1 cut(s) 39
BfaI CTAG 1 cut(s) 404
BfoI RGCGCY 1 cut(s) 131
BfrI CTTAAG 1 cut(s) 76
BisI GCNGC 4 cut(s) 54, 57, 625, 628
BlsI GCNGC 4 cut(s) 55, 58, 626, 629
Bme1390I CCNGG 4 cut(s) 125, 214, 306, 572
Bme18I GGWCC 1 cut(s) 686
BmgT120I GGNCC 1 cut(s) 686
BmiI GGNNCC 1 cut(s) 687
BmrFI CCNGG 4 cut(s) 125, 214, 306, 572
BmsI GCATC 3 cut(s) 97, 135, 639
BpmI CTGGAG 1 cut(s) 719
Bpu10I CCTNAGC 1 cut(s) 31
BsaJI CCNNGG 1 cut(s) 570
BsaWI WCCGGW 1 cut(s) 23
Bsc4I CCNNNNNNNGG 2 cut(s) 305, 718
Bse21I CCTNAGG 1 cut(s) 717
Bse3DI GCAATG 1 cut(s) 431
BseBI CCWGG 4 cut(s) 125, 214, 306, 572
BseDI CCNNGG 1 cut(s) 570
BseGI GGATG 2 cut(s) 88, 566
BseLI CCNNNNNNNGG 2 cut(s) 305, 718
BseMI GCAATG 1 cut(s) 431
BseMII CTCAG 1 cut(s) 731
BseSI GKGCMC 1 cut(s) 603
BseXI GCAGC 3 cut(s) 43, 65, 611
BseYI CCCAGC 1 cut(s) 703
BshFI GGCC 1 cut(s) 191
BsiHKAI GWGCWC 1 cut(s) 603
BsiSI CCGG 1 cut(s) 24
BslFI GGGAC 1 cut(s) 695
BslI CCNNNNNNNGG 2 cut(s) 305, 718
BsmFI GGGAC 1 cut(s) 695
BsnI GGCC 1 cut(s) 191
Bsp1286I GDGCHC 1 cut(s) 603
Bsp143I GATC 2 cut(s) 39, 498
BspACI CCGC 1 cut(s) 627
BspANI GGCC 1 cut(s) 191
BspCNI CTCAG 1 cut(s) 730
BspLI GGNNCC 1 cut(s) 687
BspPI GGATC 1 cut(s) 493
BspTI CTTAAG 1 cut(s) 76
BsrDI GCAATG 1 cut(s) 431
BssECI CCNNGG 1 cut(s) 570
BssMI GATC 2 cut(s) 39, 498
Bst2UI CCWGG 4 cut(s) 125, 214, 306, 572
Bst4CI ACNGT 2 cut(s) 64, 543
BstAFI CTTAAG 1 cut(s) 76
BstC8I GCNNGC 1 cut(s) 429
BstDEI CTNAG 4 cut(s) 31, 186, 444, 717
BstF5I GGATG 2 cut(s) 88, 566
BstH2I RGCGCY 1 cut(s) 131
BstHHI GCGC 1 cut(s) 130
BstKTI GATC 2 cut(s) 42, 501
BstMBI GATC 2 cut(s) 39, 498
BstMWI GCNNNNNNNGC 1 cut(s) 433
BstNI CCWGG 4 cut(s) 125, 214, 306, 572
BstSCI CCNGG 4 cut(s) 123, 212, 304, 570
BstSLI GKGCMC 1 cut(s) 603
BstV1I GCAGC 3 cut(s) 43, 65, 611
BstX2I RGATCY 1 cut(s) 498
BstYI RGATCY 1 cut(s) 498
Bsu36I CCTNAGG 1 cut(s) 717
BsuRI GGCC 1 cut(s) 191
BtsCI GGATG 2 cut(s) 88, 566
Cac8I GCNNGC 1 cut(s) 429
CfoI GCGC 1 cut(s) 130
Cfr13I GGNCC 1 cut(s) 686
Csp6I GTAC 1 cut(s) 544
CviAII CATG 1 cut(s) 493
CviJI RGCY 8 cut(s) 56, 191, 509, 533, 624, 638, 675, 703
CviKI_1 RGCY 8 cut(s) 56, 191, 509, 533, 624, 638, 675, 703
CviQI GTAC 1 cut(s) 544
DdeI CTNAG 4 cut(s) 31, 186, 444, 717
DpnI GATC 2 cut(s) 41, 500
DpnII GATC 2 cut(s) 39, 498
Eco147I AGGCCT 1 cut(s) 191
Eco47I GGWCC 1 cut(s) 686
Eco57I CTGAAG 1 cut(s) 254
Eco81I CCTNAGG 1 cut(s) 717
EcoO109I RGGNCCY 1 cut(s) 686
EcoRII CCWGG 4 cut(s) 123, 212, 304, 570
FaeI CATG 1 cut(s) 496
FalI AAGNNNNNCTT 2 cut(s) 179, 211
FaqI GGGAC 1 cut(s) 695
FatI CATG 1 cut(s) 492
FbaI TGATCA 1 cut(s) 39
Fnu4HI GCNGC 4 cut(s) 54, 57, 625, 628
FokI GGATG 2 cut(s) 75, 553
Fsp4HI GCNGC 4 cut(s) 54, 57, 625, 628
FspBI CTAG 1 cut(s) 404
GlaI GCGC 1 cut(s) 129
GluI GCNGC 4 cut(s) 54, 57, 625, 628
GsaI CCCAGC 1 cut(s) 707
GsuI CTGGAG 1 cut(s) 719
HaeII RGCGCY 1 cut(s) 131
HaeIII GGCC 1 cut(s) 191
HapII CCGG 1 cut(s) 24
HhaI GCGC 1 cut(s) 130
Hin1II CATG 1 cut(s) 496
Hin6I GCGC 1 cut(s) 128
HinP1I GCGC 1 cut(s) 128
HinfI GANTC 3 cut(s) 209, 344, 708
HpaII CCGG 1 cut(s) 24
Hpy166II GTNNAC 1 cut(s) 601
Hpy188I TCNGA 1 cut(s) 334
Hpy188III TCNNGA 4 cut(s) 98, 281, 415, 698
Hpy8I GTNNAC 1 cut(s) 601
HpyAV CCTTC 3 cut(s) 202, 232, 382
HpyCH4III ACNGT 2 cut(s) 64, 543
HpyCH4V TGCA 8 cut(s) 4, 59, 177, 259, 431, 436, 496, 601
HpyF10VI GCNNNNNNNGC 1 cut(s) 433
HpyF3I CTNAG 4 cut(s) 31, 186, 444, 717
Hsp92II CATG 1 cut(s) 496
HspAI GCGC 1 cut(s) 128
Ksp22I TGATCA 1 cut(s) 39
Kzo9I GATC 2 cut(s) 39, 498
LmnI GCTCC 2 cut(s) 50, 700
Lsp1109I GCAGC 3 cut(s) 43, 65, 611
LweI GCATC 3 cut(s) 97, 135, 639
MaeI CTAG 1 cut(s) 404
MalI GATC 2 cut(s) 41, 500
MboI GATC 2 cut(s) 39, 498
MboII GAAGA 2 cut(s) 187, 247
MfeI CAATTG 1 cut(s) 322
MflI RGATCY 1 cut(s) 498
MhlI GDGCHC 1 cut(s) 603
MluCI AATT 3 cut(s) 5, 322, 589
MlyI GAGTC 3 cut(s) 218, 353, 717
MmeI TCCRAC 2 cut(s) 163, 338
MnlI CCTC 6 cut(s) 352, 500, 523, 665, 699, 726
MseI TTAA 4 cut(s) 77, 83, 422, 747
MspA1I CMGCKG 1 cut(s) 56
MspCI CTTAAG 1 cut(s) 76
MspI CCGG 1 cut(s) 24
MspR9I CCNGG 4 cut(s) 125, 214, 306, 572
MunI CAATTG 1 cut(s) 322
MvaI CCWGG 4 cut(s) 125, 214, 306, 572
MwoI GCNNNNNNNGC 1 cut(s) 433
NdeII GATC 2 cut(s) 39, 498
NlaIII CATG 1 cut(s) 496
NlaIV GGNNCC 1 cut(s) 687
PceI AGGCCT 1 cut(s) 191
PfoI TCCNGGA 1 cut(s) 212
PkrI GCNGC 4 cut(s) 55, 58, 626, 629
PleI GAGTC 3 cut(s) 217, 352, 716
PpsI GAGTC 3 cut(s) 217, 352, 716
PpuMI RGGWCCY 1 cut(s) 686
PshBI ATTAAT 1 cut(s) 747
Psp5II RGGWCCY 1 cut(s) 686
Psp6I CCWGG 4 cut(s) 123, 212, 304, 570
PspFI CCCAGC 1 cut(s) 703
PspGI CCWGG 4 cut(s) 123, 212, 304, 570
PspN4I GGNNCC 1 cut(s) 687
PspPI GGNCC 1 cut(s) 686
PspPPI RGGWCCY 1 cut(s) 686
PsuI RGATCY 1 cut(s) 498
PvuII CAGCTG 1 cut(s) 56
RsaI GTAC 1 cut(s) 545
RsaNI GTAC 1 cut(s) 544
SaqAI TTAA 4 cut(s) 77, 83, 422, 747
SatI GCNGC 4 cut(s) 54, 57, 625, 628
Sau3AI GATC 2 cut(s) 39, 498
Sau96I GGNCC 1 cut(s) 686
SchI GAGTC 3 cut(s) 218, 353, 717
ScrFI CCNGG 4 cut(s) 125, 214, 306, 572
SduI GDGCHC 1 cut(s) 603
SfaNI GCATC 3 cut(s) 97, 135, 639
SinI GGWCC 1 cut(s) 686
SmlI CTYRAG 1 cut(s) 76
SmoI CTYRAG 1 cut(s) 76
Sse9I AATT 3 cut(s) 5, 322, 589
SseBI AGGCCT 1 cut(s) 191
SsiI CCGC 1 cut(s) 627
SspI AATATT 3 cut(s) 379, 727, 760
SspMI CTAG 1 cut(s) 404
StuI AGGCCT 1 cut(s) 191
StyD4I CCNGG 4 cut(s) 123, 212, 304, 570
TaaI ACNGT 2 cut(s) 64, 543
TaqI TCGA 1 cut(s) 114
TasI AATT 3 cut(s) 5, 322, 589
TatI WGTACW 1 cut(s) 543
TauI GCSGC 1 cut(s) 630
Tru1I TTAA 4 cut(s) 77, 83, 422, 747
Tru9I TTAA 4 cut(s) 77, 83, 422, 747
TseI GCWGC 3 cut(s) 53, 56, 624
TspDTI ATGAA 3 cut(s) 513, 555, 667
Vha464I CTTAAG 1 cut(s) 76
VneI GTGCAC 1 cut(s) 599
VpaK11BI GGWCC 1 cut(s) 686
VspI ATTAAT 1 cut(s) 747
XspI CTAG 1 cut(s) 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.