pycom09g12740

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0000447
Physical Location & Seq
Reverse (-)
11285584 .. 11288449
2866 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g12740.1

Sequence Viewer

Length: 1443 bp
ATGGATTGGAGAAAATCAAACTGGTGGAGGCTGAGGTTGATTGAAGTGGTTTTCCTTCTTGTGGCTGTAGTATTTGTCTCGGCACAAGAAAGTTCTCAGCAACAATCTTCAAGTCAGAATCATGCAGAAAAGGTTGAACCTAATTACTTAATCAGAGTGTCCAAATTGCTTTCACATCTCGATGGAGCGGTTTACAAGCATGACTGGCCTGACATGCGATTTGGATGGAAAATTGTGGTTGGTACGTTTATTGGATTCCTTGGGGCAGCATTTGGGAGCGTGGGAGGTGTTGGAGGGGGTGGTTTTTTTGTTCCGATGCTCACCCTGATTATCGGCTTTGATCAGAAATCATCAACAGCGATATCAAAATGTATGATCACGGGGGGAGCAGCAGCAACTGTCTTGTACAATTTAAGGCTAAGGCATCCCACACTTGAGTTGCCCCTCATGGACTATGATATCGCGCTTCTGTTCCAACCAATGTTGGTGTTAGGGATCAGCATTGGAGTTTCTTTGAATGTTGTACTTTCCGAATGGATGATCACCATCTTACTAATTATTGTTCTCTTAGGCACATCAACTAAATCATTCTTCAAAGGTGTCGAGACGTGGAAGAAAGAAACTGCAACGAAAAAGAATTCACTGGAGGCTTCCAAACGCTTGCAATTGAAAGACATTGCCAGTGAAGACATTGAAGGCAGAAATAATCATGGAGGCACTGACAACGGCATACCAGAAGTTAAGGAGACTAAAAGAAAAGTGGTTTCTGTTCTTCGTAACGTTTACTGGAAGCAACTTGGAGTTATTTTTGCTGTCTGGATCATAATACTTGGATTGCAGATTGGCAAGAATTATGTGGCAAAATGTTCAGTGGCATATTGGATATTAGATTTCTTACAGATTCCTGTGACGGTTGGAGTGACTTCGTATGAGGCAGTTAAAGTGTACAAAGGGCAGAGGGTAATTTCATCCAGGGGAGAAGCAGGTGCAAAATGGAGAGTGCATAATCTTGTTTCTTATTGTTTCTTTGGCATAATAGCTGGATTGATTGGTGGATTGCTTGGTCTCGGTGGAGGTTTTATTATGGGTCCTCTCTTTTTGGAGATGGGAGTTCCTCCTCAGGTAGCAAGTGCAACAAGCACCTTCATCATGTTATTCTCGTCATCCATGTCTGTCGTAGAATACGACCTCCTAAAGCGATTTCCAATTCCCTACGCACTCTATTTCACTGCTGTGGCTATCGGTTCTGCGATCATAGGGCAACATGTGGTAGGGAAGGTGATTAAGGCAATAGGAAGAGCATCCTTGATCATCTTCATTCTTGCTTTCACAATTTTTGTGAGCGCACTGACGTTAGGTGGGGTTGGCATGGCAAATTTGGTCAAAAAGATTGAGCATAAGGAGTACTTGGGTTTTCAGAGTATGTGTACTCATAAATCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

481

Amino Acids

52.66

Weight (kDa)

9.55

Isoelectric Point (pI)

32.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 11 - 194 7e-14 Sulfite exporter TauE/SafE
TauE PF01925 341 - 447 1.8e-12 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 974
Acc36I ACCTGC 1 cut(s) 974
AccBSI CCGCTC 1 cut(s) 188
AccII CGCG 1 cut(s) 464
AciI CCGC 1 cut(s) 188
AclI AACGTT 1 cut(s) 780
AclWI GGATC 2 cut(s) 503, 827
AcsI RAATTY 2 cut(s) 637, 1375
AfaI GTAC 6 cut(s) 244, 407, 525, 947, 1406, 1429
AfiI CCNNNNNNNGG 1 cut(s) 61
AflIII ACRYGT 1 cut(s) 1264
AgsI TTSAA 7 cut(s) 44, 111, 137, 517, 595, 670, 695
AjiI CACGTC 1 cut(s) 609
AjnI CCWGG 1 cut(s) 971
AleI CACNNNNGTG 1 cut(s) 1232
AluBI AGCT 1 cut(s) 1040
AluI AGCT 1 cut(s) 1040
Alw26I GTCTC 4 cut(s) 82, 599, 740, 1070
AlwI GGATC 2 cut(s) 503, 827
AlwNI CAGNNNCTG 1 cut(s) 398
AoxI GGCC 1 cut(s) 206
ApeKI GCWGC 3 cut(s) 266, 389, 392
ApoI RAATTY 2 cut(s) 637, 1375
ArsI GACNNNNNNTTYG 2 cut(s) 203, 235
AspLEI GCGC 2 cut(s) 466, 1346
AspS9I GGNCC 1 cut(s) 1088
AsuHPI GGTGA 3 cut(s) 313, 535, 1291
AvaII GGWCC 1 cut(s) 1088
AxyI CCTNAGG 1 cut(s) 1119
BbsI GAAGAC 1 cut(s) 693
BbvCI CCTCAGC 1 cut(s) 32
BbvI GCAGC 3 cut(s) 278, 401, 404
BccI CCATC 4 cut(s) 176, 219, 554, 1099
BceAI ACGGC 1 cut(s) 742
BciT130I CCWGG 1 cut(s) 973
BclI TGATCA 4 cut(s) 340, 375, 540, 1308
BcoDI GTCTC 4 cut(s) 82, 599, 740, 1070
BfmI CTRYAG 1 cut(s) 66
BfuAI ACCTGC 1 cut(s) 974
BisI GCNGC 3 cut(s) 267, 390, 393
BlsI GCNGC 3 cut(s) 268, 391, 394
BmcAI AGTACT 1 cut(s) 1406
Bme1390I CCNGG 1 cut(s) 973
Bme18I GGWCC 1 cut(s) 1088
BmgBI CACGTC 1 cut(s) 609
BmgT120I GGNCC 1 cut(s) 1088
BmiI GGNNCC 1 cut(s) 1089
BmrFI CCNGG 1 cut(s) 973
BmsI GCATC 3 cut(s) 306, 433, 1310
BpiI GAAGAC 1 cut(s) 693
BpmI CTGGAG 1 cut(s) 665
Bpu10I CCTNAGC 2 cut(s) 32, 419
BpuEI CTTGAG 1 cut(s) 455
BsaBI GATNNNNATC 1 cut(s) 545
BsaI GGTCTC 1 cut(s) 1070
BsaJI CCNNGG 2 cut(s) 259, 972
Bsc4I CCNNNNNNNGG 1 cut(s) 61
Bse1I ACTGG 5 cut(s) 26, 209, 648, 681, 791
Bse21I CCTNAGG 1 cut(s) 1119
Bse3DI GCAATG 1 cut(s) 675
Bse8I GATNNNNATC 1 cut(s) 545
BseBI CCWGG 1 cut(s) 973
BseDI CCNNGG 2 cut(s) 259, 972
BseGI GGATG 6 cut(s) 230, 424, 543, 968, 1163, 1301
BseJI GATNNNNATC 1 cut(s) 545
BseLI CCNNNNNNNGG 1 cut(s) 61
BseMI GCAATG 1 cut(s) 675
BseMII CTCAG 3 cut(s) 23, 110, 1133
BseNI ACTGG 5 cut(s) 26, 209, 648, 681, 791
BseRI GAGGAG 1 cut(s) 1107
BseXI GCAGC 3 cut(s) 278, 401, 404
Bsh1236I CGCG 1 cut(s) 464
BshFI GGCC 1 cut(s) 208
BslI CCNNNNNNNGG 1 cut(s) 61
BsmAI GTCTC 4 cut(s) 82, 599, 740, 1070
BsmBI CGTCTC 1 cut(s) 599
BsnI GGCC 1 cut(s) 208
Bso31I GGTCTC 1 cut(s) 1070
Bsp1407I TGTACA 2 cut(s) 405, 945
Bsp143I GATC 7 cut(s) 340, 375, 495, 540, 819, 1251, 1308
BspACI CCGC 1 cut(s) 188
BspANI GGCC 1 cut(s) 208
BspCNI CTCAG 3 cut(s) 24, 109, 1132
BspFNI CGCG 1 cut(s) 464
BspLI GGNNCC 1 cut(s) 1089
BspMI ACCTGC 1 cut(s) 974
BspPI GGATC 2 cut(s) 503, 827
BspQI GCTCTTC 1 cut(s) 1291
BspTNI GGTCTC 1 cut(s) 1070
BsrBI CCGCTC 1 cut(s) 188
BsrDI GCAATG 1 cut(s) 675
BsrGI TGTACA 2 cut(s) 405, 945
BsrI ACTGG 5 cut(s) 26, 209, 648, 681, 791
BssECI CCNNGG 2 cut(s) 259, 972
BssMI GATC 7 cut(s) 340, 375, 495, 540, 819, 1251, 1308
BssT1I CCWWGG 1 cut(s) 259
Bst2UI CCWGG 1 cut(s) 973
Bst4CI ACNGT 2 cut(s) 400, 913
Bst6I CTCTTC 1 cut(s) 1291
BstAUI TGTACA 2 cut(s) 405, 945
BstC8I GCNNGC 1 cut(s) 662
BstDEI CTNAG 5 cut(s) 32, 96, 419, 568, 1119
BstF5I GGATG 6 cut(s) 230, 424, 543, 968, 1163, 1301
BstFNI CGCG 1 cut(s) 464
BstHHI GCGC 2 cut(s) 466, 1346
BstKTI GATC 7 cut(s) 343, 378, 498, 543, 822, 1254, 1311
BstMAI GTCTC 4 cut(s) 82, 599, 740, 1070
BstMBI GATC 7 cut(s) 340, 375, 495, 540, 819, 1251, 1308
BstMWI GCNNNNNNNGC 2 cut(s) 205, 214
BstNI CCWGG 1 cut(s) 973
BstNSI RCATGY 2 cut(s) 217, 1268
BstSCI CCNGG 1 cut(s) 971
BstSFI CTRYAG 1 cut(s) 66
BstUI CGCG 1 cut(s) 464
BstV1I GCAGC 3 cut(s) 278, 401, 404
BstV2I GAAGAC 1 cut(s) 693
Bsu36I CCTNAGG 1 cut(s) 1119
BsuRI GGCC 1 cut(s) 208
BtrI CACGTC 1 cut(s) 609
BtsCI GGATG 6 cut(s) 230, 424, 543, 968, 1163, 1301
BtsI GCAGTG 1 cut(s) 1227
BtsIMutI CAGTG 6 cut(s) 641, 688, 717, 876, 1227, 1346
BveI ACCTGC 1 cut(s) 974
Cac8I GCNNGC 1 cut(s) 662
CaiI CAGNNNCTG 1 cut(s) 398
CfoI GCGC 2 cut(s) 466, 1346
Cfr13I GGNCC 1 cut(s) 1088
Csp6I GTAC 6 cut(s) 243, 406, 524, 946, 1405, 1428
CviAII CATG 9 cut(s) 122, 200, 214, 448, 710, 1150, 1168, 1265, 1369
CviJI RGCY 8 cut(s) 31, 65, 208, 336, 418, 650, 1040, 1238
CviKI_1 RGCY 8 cut(s) 31, 65, 208, 336, 418, 650, 1040, 1238
CviQI GTAC 6 cut(s) 243, 406, 524, 946, 1405, 1428
DdeI CTNAG 5 cut(s) 32, 96, 419, 568, 1119
DpnI GATC 7 cut(s) 342, 377, 497, 542, 821, 1253, 1310
DpnII GATC 7 cut(s) 340, 375, 495, 540, 819, 1251, 1308
Eam1104I CTCTTC 1 cut(s) 1291
EarI CTCTTC 1 cut(s) 1291
Eco130I CCWWGG 1 cut(s) 259
Eco31I GGTCTC 1 cut(s) 1070
Eco32I GATATC 2 cut(s) 363, 460
Eco47I GGWCC 1 cut(s) 1088
Eco81I CCTNAGG 1 cut(s) 1119
EcoO109I RGGNCCY 1 cut(s) 1088
EcoRI GAATTC 1 cut(s) 637
EcoRII CCWGG 1 cut(s) 971
EcoRV GATATC 2 cut(s) 363, 460
EcoT14I CCWWGG 1 cut(s) 259
ErhI CCWWGG 1 cut(s) 259
Esp3I CGTCTC 1 cut(s) 599
FaeI CATG 9 cut(s) 125, 203, 217, 451, 713, 1153, 1171, 1268, 1372
FalI AAGNNNNNCTT 2 cut(s) 1391, 1423
FatI CATG 9 cut(s) 121, 199, 213, 447, 709, 1149, 1167, 1264, 1368
FbaI TGATCA 4 cut(s) 340, 375, 540, 1308
Fnu4HI GCNGC 3 cut(s) 267, 390, 393
FokI GGATG 6 cut(s) 237, 411, 550, 955, 1150, 1288
Fsp4HI GCNGC 3 cut(s) 267, 390, 393
GlaI GCGC 2 cut(s) 465, 1345
GluI GCNGC 3 cut(s) 267, 390, 393
GsuI CTGGAG 1 cut(s) 665
HaeIII GGCC 1 cut(s) 208
HhaI GCGC 2 cut(s) 466, 1346
Hin1II CATG 9 cut(s) 125, 203, 217, 451, 713, 1153, 1171, 1268, 1372
Hin6I GCGC 2 cut(s) 464, 1344
HinP1I GCGC 2 cut(s) 464, 1344
HinfI GANTC 3 cut(s) 118, 255, 901
HphI GGTGA 3 cut(s) 313, 535, 1291
Hpy166II GTNNAC 4 cut(s) 193, 784, 946, 1428
Hpy188I TCNGA 6 cut(s) 117, 155, 315, 345, 532, 1419
Hpy188III TCNNGA 3 cut(s) 179, 604, 817
Hpy8I GTNNAC 4 cut(s) 193, 784, 946, 1428
HpyAV CCTTC 4 cut(s) 65, 689, 1153, 1270
HpyCH4III ACNGT 2 cut(s) 400, 913
HpyCH4IV ACGT 4 cut(s) 245, 608, 780, 1352
HpyCH4V TGCA 7 cut(s) 125, 626, 664, 838, 989, 1003, 1133
HpyF10VI GCNNNNNNNGC 2 cut(s) 205, 214
HpyF3I CTNAG 5 cut(s) 32, 96, 419, 568, 1119
HpySE526I ACGT 4 cut(s) 245, 608, 780, 1352
Hsp92II CATG 9 cut(s) 125, 203, 217, 451, 713, 1153, 1171, 1268, 1372
HspAI GCGC 2 cut(s) 464, 1344
Ksp22I TGATCA 4 cut(s) 340, 375, 540, 1308
Kzo9I GATC 7 cut(s) 340, 375, 495, 540, 819, 1251, 1308
LguI GCTCTTC 1 cut(s) 1291
LmnI GCTCC 3 cut(s) 185, 276, 386
Lsp1109I GCAGC 3 cut(s) 278, 401, 404
LweI GCATC 3 cut(s) 306, 433, 1310
MaeII ACGT 4 cut(s) 245, 608, 780, 1352
MaeIII GTNAC 3 cut(s) 776, 907, 919
MalI GATC 7 cut(s) 342, 377, 497, 542, 821, 1253, 1310
MbiI CCGCTC 1 cut(s) 188
MboI GATC 7 cut(s) 340, 375, 495, 540, 819, 1251, 1308
MboII GAAGA 7 cut(s) 99, 583, 625, 698, 764, 1306, 1308
MfeI CAATTG 1 cut(s) 665
MmeI TCCRAC 3 cut(s) 271, 499, 895
MseI TTAA 5 cut(s) 149, 413, 741, 939, 1284
MslI CAYNNNNRTG 2 cut(s) 180, 1232
MspR9I CCNGG 1 cut(s) 973
MunI CAATTG 1 cut(s) 665
MvaI CCWGG 1 cut(s) 973
MvnI CGCG 1 cut(s) 464
MwoI GCNNNNNNNGC 2 cut(s) 205, 214
NdeII GATC 7 cut(s) 340, 375, 495, 540, 819, 1251, 1308
NlaIII CATG 9 cut(s) 125, 203, 217, 451, 713, 1153, 1171, 1268, 1372
NlaIV GGNNCC 1 cut(s) 1089
NmeAIII GCCGAG 1 cut(s) 59
NmuCI GTSAC 2 cut(s) 907, 919
NspI RCATGY 2 cut(s) 217, 1268
OliI CACNNNNGTG 1 cut(s) 1232
PaqCI CACCTGC 1 cut(s) 974
PciI ACATGT 1 cut(s) 1264
PciSI GCTCTTC 1 cut(s) 1291
PcsI WCGNNNNNNNCGW 1 cut(s) 1182
PfeI GAWTC 3 cut(s) 118, 255, 901
PkrI GCNGC 3 cut(s) 268, 391, 394
PpuMI RGGWCCY 1 cut(s) 1088
PscI ACATGT 1 cut(s) 1264
Psp1406I AACGTT 1 cut(s) 780
Psp5II RGGWCCY 1 cut(s) 1088
Psp6I CCWGG 1 cut(s) 971
PspGI CCWGG 1 cut(s) 971
PspN4I GGNNCC 1 cut(s) 1089
PspPI GGNCC 1 cut(s) 1088
PspPPI RGGWCCY 1 cut(s) 1088
PstNI CAGNNNCTG 1 cut(s) 398
RsaI GTAC 6 cut(s) 244, 407, 525, 947, 1406, 1429
RsaNI GTAC 6 cut(s) 243, 406, 524, 946, 1405, 1428
RseI CAYNNNNRTG 2 cut(s) 180, 1232
SapI GCTCTTC 1 cut(s) 1291
SaqAI TTAA 5 cut(s) 149, 413, 741, 939, 1284
SatI GCNGC 3 cut(s) 267, 390, 393
Sau3AI GATC 7 cut(s) 340, 375, 495, 540, 819, 1251, 1308
Sau96I GGNCC 1 cut(s) 1088
ScaI AGTACT 1 cut(s) 1406
ScrFI CCNGG 1 cut(s) 973
SfaNI GCATC 3 cut(s) 306, 433, 1310
SfcI CTRYAG 1 cut(s) 66
SinI GGWCC 1 cut(s) 1088
SmiMI CAYNNNNRTG 2 cut(s) 180, 1232
SmlI CTYRAG 1 cut(s) 434
SmoI CTYRAG 1 cut(s) 434
SsiI CCGC 1 cut(s) 188
StyD4I CCNGG 1 cut(s) 971
StyI CCWWGG 1 cut(s) 259
TaaI ACNGT 2 cut(s) 400, 913
TaiI ACGT 4 cut(s) 248, 611, 783, 1355
TaqI TCGA 2 cut(s) 180, 603
TatI WGTACW 5 cut(s) 405, 523, 945, 1404, 1427
TfiI GAWTC 3 cut(s) 118, 255, 901
Tru1I TTAA 5 cut(s) 149, 413, 741, 939, 1284
Tru9I TTAA 5 cut(s) 149, 413, 741, 939, 1284
TscAI CASTG 6 cut(s) 648, 688, 724, 876, 1234, 1353
TseFI GTSAC 2 cut(s) 907, 919
TseI GCWGC 3 cut(s) 266, 389, 392
Tsp45I GTSAC 2 cut(s) 907, 919
TspDTI ATGAA 3 cut(s) 957, 1135, 1306
TspRI CASTG 6 cut(s) 648, 688, 724, 876, 1234, 1353
VpaK11BI GGWCC 1 cut(s) 1088
XapI RAATTY 2 cut(s) 637, 1375
XceI RCATGY 2 cut(s) 217, 1268
ZrmI AGTACT 1 cut(s) 1406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.