Rmu_ssc0000210.1_g000006

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000210.1
OG0000447
Physical Location & Seq
Forward (+)
48198 .. 52312
4115 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000210.1_g000006.1.cds

Sequence Viewer

Length: 1392 bp
atggttgtggctggttttcttgttgtggctttagtgattggttcactgcaagaaacattccaacaagatgcttcaatttacagtgggactgaaaagttccaatctggttatttaaacagagtgctaagccttgtatggcgaccgggtcgattgggttatgtggctgtttggcctgaaatggaatttggttggagaattgtggtgggaacaataattggattcattggagctgcgtttgggactgtgggaggagtaggtgggggtggcatttttgttcctatgctcactttgattatcgggttcgatgataaatcatcaacagcattatcgaagtgtatgatcacgggtggagcagctgcaactgttttttacaacttaaggttaaggcatcctactcttgacttgcccatcatcgactatgacctggcgcttcttttccaaccgatgcttatgcttgggattagcattggagtttgtttgaatgtaatatttgctgagtggatgattacagtgttgctaatcattattttcttaggcacatcaactaaggccttcttcaagggagttgagtcctggaaaagagaaactatactgaagaaggaagttgccagactaatgcagtcaaatggtaatggtagtcaagaagttgaatacagacctttacctggcgttccaaccaacaattgtctatcagaaacaaatgagtctaaaaggaaagaggtttctattattgagaatatttgctggaaggaacttggacttctagttgttgtctggattttaatgcttgcattgcagattgctaagtattataccacaacttgttcggtagcatattgggtattgaacctcatgcagatccctgtggcttttggagtgagttcatacgaggctgttagactgtactatggacaaagagtgatttcatcccaggaactatcaagcacgaattggaaagtgcaccaacttattctttattgtggctgcggcatcatagctggtatagttggtggtttgcttggacttggtggaggcttcattctgggtcctctttttctggagctgggagtcccacctcaggtgtcgagtgccacagctacatttgccatgacattttctgcgtccttgtcagttgttgaatactacctcctcaaacgttttccagttccctatgctctctactttactgctgtggcaagcgtttcagccctcgtagggcaacatgtggtgagaaaggttattaaaattctagggagagcgtctataattatcttcattctcgccgcaacaatctttgtcagtgcaatatcactaggtggggttggcatagcgaatatgattgaagagattgagaacaacgagtatatgggatttgaagacatgtgcacttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

463

Amino Acids

50.45

Weight (kDa)

6.83

Isoelectric Point (pI)

37.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 987, 1284
AclI AACGTT 1 cut(s) 1156
AclWI GGATC 1 cut(s) 853
AcsI RAATTY 2 cut(s) 182, 1245
AcuI CTGAAG 1 cut(s) 614
AdeI CACNNNGTG 1 cut(s) 1316
AfaI GTAC 1 cut(s) 905
AfiI CCNNNNNNNGG 3 cut(s) 665, 1078, 1215
AflII CTTAAG 1 cut(s) 376
AflIII ACRYGT 2 cut(s) 1222, 1380
AgsI TTSAA 8 cut(s) 75, 481, 559, 650, 847, 1139, 1343, 1376
AjnI CCWGG 4 cut(s) 423, 572, 664, 930
AjuI GAANNNNNNNTTGG 2 cut(s) 168, 200
AluBI AGCT 5 cut(s) 230, 356, 998, 1063, 1097
AluI AGCT 5 cut(s) 230, 356, 998, 1063, 1097
Alw21I GWGCWC 2 cut(s) 963, 1388
Alw44I GTGCAC 2 cut(s) 959, 1384
AlwI GGATC 1 cut(s) 853
AoxI GGCC 2 cut(s) 170, 549
ApaLI GTGCAC 2 cut(s) 959, 1384
ApeKI GCWGC 4 cut(s) 230, 353, 356, 984
ApoI RAATTY 2 cut(s) 182, 1245
AspLEI GCGC 1 cut(s) 430
AspS9I GGNCC 1 cut(s) 1046
AsuC2I CCSGG 1 cut(s) 144
AsuHPI GGTGA 1 cut(s) 1240
AvaII GGWCC 1 cut(s) 1046
AxyI CCTNAGG 1 cut(s) 1077
BaeGI GKGCMC 2 cut(s) 963, 1388
BbsI GAAGAC 1 cut(s) 1383
Bbv12I GWGCWC 2 cut(s) 963, 1388
BbvI GCAGC 4 cut(s) 217, 343, 365, 971
BccI CCATC 1 cut(s) 416
BcgI CGANNNNNNTGC 2 cut(s) 433, 467
BciT130I CCWGG 4 cut(s) 425, 574, 666, 932
BclI TGATCA 1 cut(s) 339
BcnI CCSGG 1 cut(s) 144
BfaI CTAG 3 cut(s) 764, 1250, 1313
BfoI RGCGCY 1 cut(s) 431
BfrI CTTAAG 1 cut(s) 376
BisI GCNGC 6 cut(s) 231, 354, 357, 985, 988, 1284
BlpI GCTNAGC 1 cut(s) 125
BlsI GCNGC 6 cut(s) 232, 355, 358, 986, 989, 1285
Bme1390I CCNGG 5 cut(s) 144, 425, 574, 666, 932
Bme18I GGWCC 1 cut(s) 1046
BmgT120I GGNCC 1 cut(s) 1046
BmiI GGNNCC 1 cut(s) 1047
BmrFI CCNGG 5 cut(s) 144, 425, 574, 666, 932
BmsI GCATC 4 cut(s) 58, 397, 435, 999
BpiI GAAGAC 1 cut(s) 1383
BpmI CTGGAG 1 cut(s) 1079
Bpu1102I GCTNAGC 1 cut(s) 125
BpuMI CCSGG 1 cut(s) 144
BsaJI CCNNGG 1 cut(s) 930
Bsc4I CCNNNNNNNGG 3 cut(s) 665, 1078, 1215
Bse1I ACTGG 1 cut(s) 1163
Bse21I CCTNAGG 1 cut(s) 1077
Bse3DI GCAATG 1 cut(s) 791
BseBI CCWGG 4 cut(s) 425, 574, 666, 932
BseDI CCNNGG 1 cut(s) 930
BseGI GGATG 3 cut(s) 388, 507, 926
BseLI CCNNNNNNNGG 3 cut(s) 665, 1078, 1215
BseMI GCAATG 1 cut(s) 791
BseMII CTCAG 2 cut(s) 486, 1091
BseNI ACTGG 1 cut(s) 1163
BseRI GAGGAG 2 cut(s) 264, 1139
BseSI GKGCMC 2 cut(s) 963, 1388
BseXI GCAGC 4 cut(s) 217, 343, 365, 971
BseYI CCCAGC 1 cut(s) 1063
Bsh1285I CGRYCG 1 cut(s) 143
BshFI GGCC 2 cut(s) 172, 551
BsiEI CGRYCG 1 cut(s) 143
BsiHKAI GWGCWC 2 cut(s) 963, 1388
BsiSI CCGG 1 cut(s) 143
BslFI GGGAC 3 cut(s) 100, 253, 1055
BslI CCNNNNNNNGG 3 cut(s) 665, 1078, 1215
BsmFI GGGAC 3 cut(s) 100, 253, 1055
BsnI GGCC 2 cut(s) 172, 551
Bsp1286I GDGCHC 2 cut(s) 963, 1388
Bsp143I GATC 2 cut(s) 339, 858
Bsp1720I GCTNAGC 1 cut(s) 125
BspACI CCGC 2 cut(s) 987, 1284
BspANI GGCC 2 cut(s) 172, 551
BspCNI CTCAG 2 cut(s) 487, 1090
BspLI GGNNCC 1 cut(s) 1047
BspPI GGATC 1 cut(s) 853
BspTI CTTAAG 1 cut(s) 376
BsrDI GCAATG 1 cut(s) 791
BsrI ACTGG 1 cut(s) 1163
BssECI CCNNGG 1 cut(s) 930
BssMI GATC 2 cut(s) 339, 858
Bst2UI CCWGG 4 cut(s) 425, 574, 666, 932
Bst4CI ACNGT 5 cut(s) 83, 244, 364, 511, 903
Bst6I CTCTTC 1 cut(s) 1338
BstAFI CTTAAG 1 cut(s) 376
BstC8I GCNNGC 2 cut(s) 789, 1198
BstDEI CTNAG 6 cut(s) 125, 495, 532, 546, 804, 1077
BstF5I GGATG 3 cut(s) 388, 507, 926
BstH2I RGCGCY 1 cut(s) 431
BstHHI GCGC 1 cut(s) 430
BstKTI GATC 2 cut(s) 342, 861
BstMBI GATC 2 cut(s) 339, 858
BstMCI CGRYCG 1 cut(s) 143
BstMWI GCNNNNNNNGC 2 cut(s) 793, 1103
BstNI CCWGG 4 cut(s) 425, 574, 666, 932
BstNSI RCATGY 2 cut(s) 1226, 1384
BstSCI CCNGG 5 cut(s) 142, 423, 572, 664, 930
BstSLI GKGCMC 2 cut(s) 963, 1388
BstV1I GCAGC 4 cut(s) 217, 343, 365, 971
BstV2I GAAGAC 1 cut(s) 1383
BstX2I RGATCY 1 cut(s) 858
BstYI RGATCY 1 cut(s) 858
Bsu36I CCTNAGG 1 cut(s) 1077
BsuRI GGCC 2 cut(s) 172, 551
BtsCI GGATG 3 cut(s) 388, 507, 926
BtsI GCAGTG 1 cut(s) 44
BtsIMutI CAGTG 4 cut(s) 44, 88, 516, 1306
Cac8I GCNNGC 2 cut(s) 789, 1198
CfoI GCGC 1 cut(s) 430
Cfr13I GGNCC 1 cut(s) 1046
CseI GACGC 2 cut(s) 1110, 1248
Csp6I GTAC 1 cut(s) 904
CviAII CATG 4 cut(s) 853, 1108, 1223, 1381
CviQI GTAC 1 cut(s) 904
DdeI CTNAG 6 cut(s) 125, 495, 532, 546, 804, 1077
DpnI GATC 2 cut(s) 341, 860
DpnII GATC 2 cut(s) 339, 858
DraI TTTAAA 1 cut(s) 114
DraIII CACNNNGTG 1 cut(s) 1316
Eam1104I CTCTTC 1 cut(s) 1338
EarI CTCTTC 1 cut(s) 1338
Eco147I AGGCCT 1 cut(s) 551
Eco47I GGWCC 1 cut(s) 1046
Eco57I CTGAAG 1 cut(s) 614
Eco81I CCTNAGG 1 cut(s) 1077
EcoO109I RGGNCCY 1 cut(s) 1046
EcoRII CCWGG 4 cut(s) 423, 572, 664, 930
FaeI CATG 4 cut(s) 856, 1111, 1226, 1384
FalI AAGNNNNNCTT 2 cut(s) 539, 571
FaqI GGGAC 3 cut(s) 100, 253, 1055
FatI CATG 4 cut(s) 852, 1107, 1222, 1380
FbaI TGATCA 1 cut(s) 339
Fnu4HI GCNGC 6 cut(s) 231, 354, 357, 985, 988, 1284
FokI GGATG 3 cut(s) 375, 514, 913
Fsp4HI GCNGC 6 cut(s) 231, 354, 357, 985, 988, 1284
FspBI CTAG 3 cut(s) 764, 1250, 1313
GlaI GCGC 1 cut(s) 429
GluI GCNGC 6 cut(s) 231, 354, 357, 985, 988, 1284
GsaI CCCAGC 1 cut(s) 1067
GsuI CTGGAG 1 cut(s) 1079
HaeII RGCGCY 1 cut(s) 431
HaeIII GGCC 2 cut(s) 172, 551
HapII CCGG 1 cut(s) 143
HgaI GACGC 2 cut(s) 1110, 1248
HhaI GCGC 1 cut(s) 430
Hin1II CATG 4 cut(s) 856, 1111, 1226, 1384
Hin6I GCGC 1 cut(s) 428
HinP1I GCGC 1 cut(s) 428
HinfI GANTC 4 cut(s) 219, 569, 704, 1068
HpaII CCGG 1 cut(s) 143
HphI GGTGA 1 cut(s) 1240
Hpy166II GTNNAC 3 cut(s) 44, 961, 1386
Hpy188I TCNGA 1 cut(s) 694
Hpy188III TCNNGA 4 cut(s) 398, 641, 775, 1058
Hpy8I GTNNAC 3 cut(s) 44, 961, 1386
HpyAV CCTTC 3 cut(s) 562, 592, 742
HpyCH4III ACNGT 5 cut(s) 83, 244, 364, 511, 903
HpyCH4IV ACGT 1 cut(s) 1156
HpyCH4V TGCA 9 cut(s) 49, 359, 619, 791, 796, 856, 961, 1304, 1386
HpyF10VI GCNNNNNNNGC 2 cut(s) 793, 1103
HpyF3I CTNAG 6 cut(s) 125, 495, 532, 546, 804, 1077
HpySE526I ACGT 1 cut(s) 1156
Hsp92II CATG 4 cut(s) 856, 1111, 1226, 1384
HspAI GCGC 1 cut(s) 428
Ksp22I TGATCA 1 cut(s) 339
Kzo9I GATC 2 cut(s) 339, 858
LmnI GCTCC 3 cut(s) 227, 350, 1060
Lsp1109I GCAGC 4 cut(s) 217, 343, 365, 971
LweI GCATC 4 cut(s) 58, 397, 435, 999
MaeI CTAG 3 cut(s) 764, 1250, 1313
MaeII ACGT 1 cut(s) 1156
MalI GATC 2 cut(s) 341, 860
MboI GATC 2 cut(s) 339, 858
MboII GAAGA 5 cut(s) 547, 607, 1264, 1355, 1388
MfeI CAATTG 1 cut(s) 682
MflI RGATCY 1 cut(s) 858
MhlI GDGCHC 2 cut(s) 963, 1388
MluCI AATT 8 cut(s) 75, 182, 195, 213, 682, 949, 1245, 1266
MlyI GAGTC 3 cut(s) 578, 713, 1077
MmeI TCCRAC 4 cut(s) 85, 170, 463, 698
MseI TTAA 6 cut(s) 113, 377, 383, 782, 1242, 1390
MspA1I CMGCKG 1 cut(s) 356
MspCI CTTAAG 1 cut(s) 376
MspI CCGG 1 cut(s) 143
MspR9I CCNGG 5 cut(s) 144, 425, 574, 666, 932
MunI CAATTG 1 cut(s) 682
MvaI CCWGG 4 cut(s) 425, 574, 666, 932
MwoI GCNNNNNNNGC 2 cut(s) 793, 1103
NciI CCSGG 1 cut(s) 144
NdeII GATC 2 cut(s) 339, 858
NlaIII CATG 4 cut(s) 856, 1111, 1226, 1384
NlaIV GGNNCC 1 cut(s) 1047
NspI RCATGY 2 cut(s) 1226, 1384
PceI AGGCCT 1 cut(s) 551
PciI ACATGT 2 cut(s) 1222, 1380
PfeI GAWTC 1 cut(s) 219
PflFI GACNNNGTC 1 cut(s) 144
PfoI TCCNGGA 1 cut(s) 572
PkrI GCNGC 6 cut(s) 232, 355, 358, 986, 989, 1285
PleI GAGTC 3 cut(s) 577, 712, 1076
PpsI GAGTC 3 cut(s) 577, 712, 1076
PpuMI RGGWCCY 1 cut(s) 1046
PscI ACATGT 2 cut(s) 1222, 1380
Psp1406I AACGTT 1 cut(s) 1156
Psp5II RGGWCCY 1 cut(s) 1046
Psp6I CCWGG 4 cut(s) 423, 572, 664, 930
PspFI CCCAGC 1 cut(s) 1063
PspGI CCWGG 4 cut(s) 423, 572, 664, 930
PspN4I GGNNCC 1 cut(s) 1047
PspPI GGNCC 1 cut(s) 1046
PspPPI RGGWCCY 1 cut(s) 1046
PsuI RGATCY 1 cut(s) 858
PsyI GACNNNGTC 1 cut(s) 144
PvuII CAGCTG 1 cut(s) 356
RsaI GTAC 1 cut(s) 905
RsaNI GTAC 1 cut(s) 904
SaqAI TTAA 6 cut(s) 113, 377, 383, 782, 1242, 1390
SatI GCNGC 6 cut(s) 231, 354, 357, 985, 988, 1284
Sau3AI GATC 2 cut(s) 339, 858
Sau96I GGNCC 1 cut(s) 1046
SchI GAGTC 3 cut(s) 578, 713, 1077
ScrFI CCNGG 5 cut(s) 144, 425, 574, 666, 932
SduI GDGCHC 2 cut(s) 963, 1388
SfaNI GCATC 4 cut(s) 58, 397, 435, 999
SinI GGWCC 1 cut(s) 1046
SmlI CTYRAG 1 cut(s) 376
SmoI CTYRAG 1 cut(s) 376
Sse9I AATT 8 cut(s) 75, 182, 195, 213, 682, 949, 1245, 1266
SseBI AGGCCT 1 cut(s) 551
SsiI CCGC 2 cut(s) 987, 1284
SspI AATATT 2 cut(s) 489, 739
SspMI CTAG 3 cut(s) 764, 1250, 1313
StuI AGGCCT 1 cut(s) 551
StyD4I CCNGG 5 cut(s) 142, 423, 572, 664, 930
TaaI ACNGT 5 cut(s) 83, 244, 364, 511, 903
TaiI ACGT 1 cut(s) 1159
TaqI TCGA 5 cut(s) 148, 303, 329, 414, 1085
TasI AATT 8 cut(s) 75, 182, 195, 213, 682, 949, 1245, 1266
TatI WGTACW 1 cut(s) 903
TauI GCSGC 2 cut(s) 990, 1286
TfiI GAWTC 1 cut(s) 219
Tru1I TTAA 6 cut(s) 113, 377, 383, 782, 1242, 1390
Tru9I TTAA 6 cut(s) 113, 377, 383, 782, 1242, 1390
TscAI CASTG 4 cut(s) 51, 88, 516, 1306
TseI GCWGC 4 cut(s) 230, 353, 356, 984
TspDTI ATGAA 5 cut(s) 211, 873, 915, 1027, 1264
TspRI CASTG 4 cut(s) 51, 88, 516, 1306
Tth111I GACNNNGTC 1 cut(s) 144
Vha464I CTTAAG 1 cut(s) 376
VneI GTGCAC 2 cut(s) 959, 1384
VpaK11BI GGWCC 1 cut(s) 1046
XapI RAATTY 2 cut(s) 182, 1245
XceI RCATGY 2 cut(s) 1226, 1384
XspI CTAG 3 cut(s) 764, 1250, 1313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.