Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0001152

Physical Location & Seq

Genomic Coordinates Forward (+)

19289158 .. 19292449

Gene Structure 3292 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g25250.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGCTGGAGCTAAACATGAAATAATATGTATGCCATTAAGTGCAACGTCCTCCAAAGGGATTTGGTTTAATGAAAATCCTCTAGATTATAAAGTACCTGCAACCCTATTCCAAATTATAATTTGTGTTTTGACCTCCCGGCTACTTTATGTTCTTCTCAAGCCTTTGGGACAAACCAAATTCACTTGCAATCTCCTGGCCGGCGTTATCTTGGGGCCTTCTTTGTTTGCGACCAACCCAATAATAAAGGAGAAGGTATTTAGTCCCAAAGATATGTCGGTGTGGTCGGTCTGGGGTATGACGGGCATTATATACTCCCTCTTCTTGATCGCAATAAAAGTTGACGTGAGCATGGTGAAGAGAACCAGGCTTTCTTTGAAGATTGGTGCTCTAGGGTTCATTCTCACCCTTGCGGTATCCTTAGGCCTCGGAATCCCACTAGCCAGCTCCATTCCTGGAATCCAAGGAGGAATCTTCCCCATTTTTATGTTTACTATTCTTTCTTTCACTTTCTTCCCCGGTGTAGCTCAGGCCTTAGACGACCTCAACCTTATGAACTCTGAGTTGGGCCAACTCGCCATGTCCTCTATTTTGCTCGTTGAAATCATACAATGGTTGATCTATATGGGACAAAATATAGCTACTAAAGATAATGCAAGCCACTCAGCTTTGACCTTTCTTTCTGTAGTGATTATGGCTCTTGTGATTATATTTGCCATACGCCCACTTATGGTATGGATTGTTAAGTCCACACCAGAAGGACAAGAAGTCAAGGAGGTTTATGTGGTAGCGATACTACTTGGTGCATTATTCCTAGCCTTTGTATCCAACGCAATAGGCTGCTTCTTGATTTTAGGTCCTATACTTCTTGGGTTAGTCATACCAGATGGACCGCCTTTGGGTGCAGCAATAGTAGCCAAGTCTGAATTCTTCGTCTCTGAATGTCTTCTTCCAATCTTTTATTTTCGTATTGGTTTCAGAGCAGACATACATTCCATTACAGATTGGAAGAGTTTTACCACATTGCAGGCCATCATCGTTGCCACATATATGGCAAAGTTGTTGGCAGTCACCGTGGTAGCATTGTGCTGCAAAATTAGTTTGAGAAATAGTCTTTTGCTCGGCATGATGATGAATATCAGGGGTATTATAGAAGTCATCATGTTTTCTGGATGGAAGTTCACTAAGCTCCTAGATGACCAAGGTTATACCAACCTAGTGTTATCTGTGCTGCTTGGGAACATGATTTCAACATCATTGTTACATTTCACATACAGGGCTCATCTAAGACTTGGGCCATCACCCAAAGGTCCTCGCATTAGAAACATCCAGTCGGTTCAAAGAAACTACCCTTTCGACATTCTTTGTTGCATCCACACCGAACAAACTATCCGCAACCTCACCTCCATCCTAGAAGCCTCAAACCCAACAGAAGAGAGCCCCATTTGCGCCTACATTATCCAAGCAGTCGAGCTAGTGGGGAGGGCTATACCTGTGCTAGTCCCTTACAAGAAGAAGAAAGAGGGGAAAAAATGTAGCCGATTAAATTCACTCACACATCAGCTGATGCAAGCCTTCAAGAACTACTCGGAGAACTCAAGAGGACCTGTCTTGATCGAATCATTCACTCTGATCGCTCCCTATAAATCGATGCATGAGACCATTTGCCGTCTACTTGATGACAATCACGTACCTTTCGTTATCCTCCCATTTCATGATAACCCCAGCTGGCATATGGTCTGCAACACTGTGACTACTTCAATACGACAATTCAATAAAAACATGCTGCAATATTCATCGTGTTCAATTGGAATACTCATTGAAAGAGGGTTGCCAGGTCCGGTGACCATGTCCCATTTCTCATATAATGTGGCTGCATTTTTCATTGGCGGACCAGATGATCGCGAGGCTTTAGCTTTGGCGGCACGTATGTTAGGCAACCGGAATGTGGCCGTCACAGTAAACAGGATTCGTATTGTGCACCAGGGTGACCATAATGAAGACGAGGAGAATGAAGCTAGGTTGGATGATGCAATGGTGGATGAGTTTAAGCTGAGCAGTATTGGGAATGATTGCTTGAAATGGCGAGATATTGGGGTTGAGGACACTATACAACTTACGGATGCAATTATGGACTCGCAGGGGGATTATGATCTAGTAATGGTCGGAAGGCGGCACGCAGACAATTCATTGAGGGATGAGGAAATGTCAGAGTTCGTGCATTATGCGGAGTTGGGAATGATCGGCGACATGCTTGCTTCTCCAGATTTCTGTGGTGGAATGGTGAATGTTTTGGTGCTGCAAGAAAGTACGGAACTTAGTAGAAATTATGGATCAGCTCCTGGGCGTGACTTCTCGAAAAATTTAGGGTATAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

793

Amino Acids

87.69

Weight (kDa)

6.76

Isoelectric Point (pI)

38.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	45 - 415	3.5e-30	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	484 - 618	5.8e-06	Plant cation/H(+) antiporter domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001152)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43690 FvH4_7g25211 FvH4_7g25250 FvH4_7g25290 FvH4_7g25310
malus_domestica	MD01G1158700.v1.1 MD01G1158800.v1.1 MD07G1227200.v1.1 MD07G1227600.v1.1
prunus_persica	Prupe.2G257000_v2.0.a1 Prupe.2G257100_v2.0.a1
pyrus_communis	pycom01g17540
rosa_chinensis	RchiOBHm_Chr1g0371191 RchiOBHm_Chr1g0371201 RchiOBHm_Chr1g0371211
rosa_laevigata	RLG00000026978 RLG00000026979 RLG00000026980 RLG00000026981 RLG00000026983 RLG00000036771
rosa_multiflora	Rmu_co8222838.1_g000001 Rmu_sc0000631.1_g000023 Rmu_sc0001018.1_g000042 Rmu_sc0001018.1_g000044 Rmu_sc0001018.1_g000049 Rmu_sc0001018.1_g000050 Rmu_sc0001018.1_g000051 Rmu_sc0008081.1_g000003
rosa_roxburghii	Rroxscaffold_4G00285900 Rroxscaffold_4G00285910
rosa_rugosa	Rorug01G0361700 Rorug01G0361900 Rorug01G0362000 Rorug01G0362200 Rorug05G0460600
rosa_samantha	Rh1AG372000 Rh1AG372200 Rh1AG372300 Rh1BG335100 Rh1BG335500 Rh1BG335700 Rh1BG335800 Rh1CG348600 Rh1CG349000 Rh1CG349100 Rh1CG349200 Rh1DG366500 Rh1DG366900 Rh1DG367000 Rh5BG537300 Rh5CG560800 Rh5DG548900
rosa_wichuraiana	Rw1G032720 Rw1G032730 Rw1G032740 Rw5G047750 Rw5G047880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	90, 119
Acc36I	ACCTGC	1 cut(s)	106
AccI	GTMKAC	1 cut(s)	1672
AccII	CGCG	1 cut(s)	1905
AciI	CCGC	7 cut(s)	413, 893, 1393, 1890, 1922, 2173, 2228
AclWI	GGATC	1 cut(s)	2341
AcoI	YGGCCR	2 cut(s)	198, 1950
AcsI	RAATTY	4 cut(s)	179, 926, 1546, 2362
AfaI	GTAC	3 cut(s)	96, 1692, 2311
AfiI	CCNNNNNNNGG	4 cut(s)	57, 730, 899, 1948
AhdI	GACNNNNNGTC	1 cut(s)	767
AjiI	CACGTC	1 cut(s)	346
AjnI	CCWGG	6 cut(s)	195, 365, 454, 1834, 1983, 2341
AjuI	GAANNNNNNNTTGG	4 cut(s)	548, 580, 911, 943
AleI	CACNNNNGTG	1 cut(s)	1986
AloI	GAACNNNNNNTCC	2 cut(s)	1374, 1406
Alw21I	GWGCWC	2 cut(s)	391, 1983
Alw26I	GTCTC	2 cut(s)	940, 1652
Alw44I	GTGCAC	1 cut(s)	1979
AlwI	GGATC	1 cut(s)	2341
AlwNI	CAGNNNCTG	1 cut(s)	2342
AoxI	GGCC	8 cut(s)	198, 215, 424, 531, 568, 1029, 1295, 1950
ApaLI	GTGCAC	1 cut(s)	1979
ApeKI	GCWGC	7 cut(s)	840, 905, 1089, 1231, 1786, 1874, 2299
ApoI	RAATTY	4 cut(s)	179, 926, 1546, 2362
Asp700I	GAANNNNTTC	1 cut(s)	945
AspLEI	GCGC	1 cut(s)	1451
AspS9I	GGNCC	9 cut(s)	215, 568, 857, 890, 1295, 1310, 1604, 1838, 1892
AsuC2I	CCSGG	2 cut(s)	139, 519
AsuHPI	GGTGA	8 cut(s)	367, 397, 1063, 1293, 1393, 1855, 2000, 2296
AvaII	GGWCC	6 cut(s)	857, 890, 1310, 1604, 1838, 1892
AxyI	CCTNAGG	1 cut(s)	421
BaeGI	GKGCMC	1 cut(s)	1983
BanII	GRGCYC	2 cut(s)	1282, 1442
BbsI	GAAGAC	2 cut(s)	938, 2007
Bbv12I	GWGCWC	2 cut(s)	391, 1983
BbvI	GCAGC	7 cut(s)	827, 917, 1076, 1218, 1773, 1861, 2286
BccI	CCATC	5 cut(s)	881, 1040, 1167, 1306, 1415
BceAI	ACGGC	2 cut(s)	1653, 1937
BcgI	CGANNNNNNTGC	2 cut(s)	2237, 2271
BciT130I	CCWGG	6 cut(s)	197, 367, 456, 1836, 1985, 2343
BciVI	GTATCC	2 cut(s)	427, 835
BcnI	CCSGG	2 cut(s)	139, 519
BcoDI	GTCTC	2 cut(s)	940, 1652
BfmI	CTRYAG	1 cut(s)	684
BfuAI	ACCTGC	1 cut(s)	106
BfuI	GTATCC	2 cut(s)	427, 835
BisI	GCNGC	9 cut(s)	841, 906, 1090, 1232, 1787, 1875, 1923, 2174, 2300
BlpI	GCTNAGC	1 cut(s)	2054
BlsI	GCNGC	9 cut(s)	842, 907, 1091, 1233, 1788, 1876, 1924, 2175, 2301
Bme1390I	CCNGG	8 cut(s)	139, 197, 367, 456, 519, 1836, 1985, 2343
Bme18I	GGWCC	6 cut(s)	857, 890, 1310, 1604, 1838, 1892
BmeRI	GACNNNNNGTC	1 cut(s)	767
BmgBI	CACGTC	1 cut(s)	346
BmgT120I	GGNCC	9 cut(s)	215, 568, 857, 890, 1295, 1310, 1604, 1838, 1892
BmiI	GGNNCC	1 cut(s)	216
BmrFI	CCNGG	8 cut(s)	139, 197, 367, 456, 519, 1836, 1985, 2343
BmsI	GCATC	5 cut(s)	1380, 1557, 1641, 2020, 2113
BpiI	GAAGAC	2 cut(s)	938, 2007
BpmI	CTGGAG	2 cut(s)	27, 2247
Bpu10I	CCTNAGC	1 cut(s)	528
Bpu1102I	GCTNAGC	1 cut(s)	2054
BpuEI	CTTGAG	2 cut(s)	143, 1582
BpuMI	CCSGG	2 cut(s)	139, 519
Bsa29I	ATCGAT	1 cut(s)	1649
BsaAI	YACGTR	2 cut(s)	1690, 1928
BsaBI	GATNNNNATC	3 cut(s)	1136, 1683, 2151
BsaI	GGTCTC	1 cut(s)	1652
BsaJI	CCNNGG	7 cut(s)	427, 463, 517, 1074, 1201, 1984, 2342
BsaWI	WCCGGW	2 cut(s)	1840, 1941
BsaXI	ACNNNNNCTCC	2 cut(s)	1388, 1418
Bsc4I	CCNNNNNNNGG	4 cut(s)	57, 730, 899, 1948
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	1 cut(s)	1330
Bse21I	CCTNAGG	1 cut(s)	421
Bse3DI	GCAATG	2 cut(s)	1022, 2040
Bse8I	GATNNNNATC	3 cut(s)	1136, 1683, 2151
BseBI	CCWGG	6 cut(s)	197, 367, 456, 1836, 1985, 2343
BseCI	ATCGAT	1 cut(s)	1649
BseDI	CCNNGG	7 cut(s)	427, 463, 517, 1074, 1201, 1984, 2342
BseGI	GGATG	8 cut(s)	1178, 1326, 1371, 1407, 2032, 2047, 2128, 2203
BseJI	GATNNNNATC	3 cut(s)	1136, 1683, 2151
BseLI	CCNNNNNNNGG	4 cut(s)	57, 730, 899, 1948
BseMI	GCAATG	2 cut(s)	1022, 2040
BseMII	CTCAG	4 cut(s)	542, 552, 678, 2045
BseNI	ACTGG	1 cut(s)	1330
BseRI	GAGGAG	1 cut(s)	2021
BseSI	GKGCMC	1 cut(s)	1983
BseXI	GCAGC	7 cut(s)	827, 917, 1076, 1218, 1773, 1861, 2286
BseYI	CCCAGC	1 cut(s)	1724
BsgI	GTGCAG	1 cut(s)	924
Bsh1236I	CGCG	1 cut(s)	1905
BshFI	GGCC	8 cut(s)	200, 217, 426, 533, 570, 1031, 1297, 1952
BshVI	ATCGAT	1 cut(s)	1649
BsiHKAI	GWGCWC	2 cut(s)	391, 1983
BsiSI	CCGG	5 cut(s)	139, 201, 519, 1841, 1942
BslFI	GGGAC	5 cut(s)	183, 249, 642, 1487, 1837
BslI	CCNNNNNNNGG	4 cut(s)	57, 730, 899, 1948
BsmAI	GTCTC	2 cut(s)	940, 1652
BsmBI	CGTCTC	1 cut(s)	940
BsmFI	GGGAC	5 cut(s)	183, 249, 642, 1487, 1837
BsnI	GGCC	8 cut(s)	200, 217, 426, 533, 570, 1031, 1297, 1952
Bso31I	GGTCTC	1 cut(s)	1652
Bsp1286I	GDGCHC	4 cut(s)	391, 1282, 1442, 1983
Bsp143I	GATC	8 cut(s)	327, 618, 1614, 1632, 1900, 2152, 2241, 2333
Bsp1720I	GCTNAGC	1 cut(s)	2054
Bsp68I	TCGCGA	1 cut(s)	1905
BspACI	CCGC	7 cut(s)	413, 893, 1393, 1890, 1922, 2173, 2228
BspANI	GGCC	8 cut(s)	200, 217, 426, 533, 570, 1031, 1297, 1952
BspCNI	CTCAG	4 cut(s)	541, 553, 677, 2046
BspDI	ATCGAT	1 cut(s)	1649
BspFNI	CGCG	1 cut(s)	1905
BspHI	TCATGA	1 cut(s)	1714
BspLI	GGNNCC	1 cut(s)	216
BspMI	ACCTGC	1 cut(s)	106
BspPI	GGATC	1 cut(s)	2341
BspTNI	GGTCTC	1 cut(s)	1652
BsrDI	GCAATG	2 cut(s)	1022, 2040
BsrFI	RCCGGY	1 cut(s)	200
BsrI	ACTGG	1 cut(s)	1330
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	7 cut(s)	427, 463, 517, 1074, 1201, 1984, 2342
BssMI	GATC	8 cut(s)	327, 618, 1614, 1632, 1900, 2152, 2241, 2333
BssT1I	CCWWGG	2 cut(s)	463, 1201
Bst2UI	CCWGG	6 cut(s)	197, 367, 456, 1836, 1985, 2343
Bst4CI	ACNGT	3 cut(s)	1075, 1750, 1960
Bst6I	CTCTTC	4 cut(s)	326, 353, 1004, 1428
BstBAI	YACGTR	2 cut(s)	1690, 1928
BstC8I	GCNNGC	8 cut(s)	202, 445, 658, 1029, 1572, 1730, 2178, 2256
BstDEI	CTNAG	9 cut(s)	421, 528, 535, 561, 664, 1185, 1286, 2054, 2318
BstDSI	CCRYGG	1 cut(s)	1074
BstEII	GGTNACC	2 cut(s)	1843, 1988
BstF5I	GGATG	8 cut(s)	1178, 1326, 1371, 1407, 2032, 2047, 2128, 2203
BstFNI	CGCG	1 cut(s)	1905
BstHHI	GCGC	1 cut(s)	1451
BstKTI	GATC	8 cut(s)	330, 621, 1617, 1635, 1903, 2155, 2244, 2336
BstMAI	GTCTC	2 cut(s)	940, 1652
BstMBI	GATC	8 cut(s)	327, 618, 1614, 1632, 1900, 2152, 2241, 2333
BstMWI	GCNNNNNNNGC	3 cut(s)	914, 1446, 1922
BstNI	CCWGG	6 cut(s)	197, 367, 456, 1836, 1985, 2343
BstNSI	RCATGY	2 cut(s)	1786, 2254
BstPI	GGTNACC	2 cut(s)	1843, 1988
BstSCI	CCNGG	8 cut(s)	137, 195, 365, 454, 517, 1834, 1983, 2341
BstSFI	CTRYAG	1 cut(s)	684
BstSLI	GKGCMC	1 cut(s)	1983
BstUI	CGCG	1 cut(s)	1905
BstV1I	GCAGC	7 cut(s)	827, 917, 1076, 1218, 1773, 1861, 2286
BstV2I	GAAGAC	2 cut(s)	938, 2007
BstXI	CCANNNNNNTGG	1 cut(s)	1051
Bsu15I	ATCGAT	1 cut(s)	1649
Bsu36I	CCTNAGG	1 cut(s)	421
BsuI	GTATCC	2 cut(s)	427, 835
BsuRI	GGCC	8 cut(s)	200, 217, 426, 533, 570, 1031, 1297, 1952
BsuTUI	ATCGAT	1 cut(s)	1649
BtgI	CCRYGG	1 cut(s)	1074
BtrI	CACGTC	1 cut(s)	346
BtsCI	GGATG	8 cut(s)	1178, 1326, 1371, 1407, 2032, 2047, 2128, 2203
BtsIMutI	CAGTG	1 cut(s)	1746
BtuMI	TCGCGA	1 cut(s)	1905
BveI	ACCTGC	1 cut(s)	106
Cac8I	GCNNGC	8 cut(s)	202, 445, 658, 1029, 1572, 1730, 2178, 2256
CaiI	CAGNNNCTG	1 cut(s)	2342
CciI	TCATGA	1 cut(s)	1714
CfoI	GCGC	1 cut(s)	1451
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	9 cut(s)	215, 568, 857, 890, 1295, 1310, 1604, 1838, 1892
ClaI	ATCGAT	1 cut(s)	1649
Csp6I	GTAC	3 cut(s)	95, 1691, 2310
CviQI	GTAC	3 cut(s)	95, 1691, 2310
DdeI	CTNAG	9 cut(s)	421, 528, 535, 561, 664, 1185, 1286, 2054, 2318
DpnI	GATC	8 cut(s)	329, 620, 1616, 1634, 1902, 2154, 2243, 2335
DpnII	GATC	8 cut(s)	327, 618, 1614, 1632, 1900, 2152, 2241, 2333
DriI	GACNNNNNGTC	1 cut(s)	767
EaeI	YGGCCR	2 cut(s)	198, 1950
Eam1104I	CTCTTC	4 cut(s)	326, 353, 1004, 1428
Eam1105I	GACNNNNNGTC	1 cut(s)	767
EarI	CTCTTC	4 cut(s)	326, 353, 1004, 1428
EciI	GGCGGA	1 cut(s)	1905
Eco130I	CCWWGG	2 cut(s)	463, 1201
Eco147I	AGGCCT	2 cut(s)	426, 533
Eco24I	GRGCYC	2 cut(s)	1282, 1442
Eco31I	GGTCTC	1 cut(s)	1652
Eco47I	GGWCC	6 cut(s)	857, 890, 1310, 1604, 1838, 1892
Eco81I	CCTNAGG	1 cut(s)	421
Eco91I	GGTNACC	2 cut(s)	1843, 1988
EcoO109I	RGGNCCY	4 cut(s)	215, 857, 1310, 1604
EcoO65I	GGTNACC	2 cut(s)	1843, 1988
EcoRI	GAATTC	1 cut(s)	926
EcoRII	CCWGG	6 cut(s)	195, 365, 454, 1834, 1983, 2341
EcoT14I	CCWWGG	2 cut(s)	463, 1201
EcoT22I	ATGCAT	1 cut(s)	1656
EcoT38I	GRGCYC	2 cut(s)	1282, 1442
ErhI	CCWWGG	2 cut(s)	463, 1201
Esp3I	CGTCTC	1 cut(s)	940
FaqI	GGGAC	5 cut(s)	183, 249, 642, 1487, 1837
FauNDI	CATATG	1 cut(s)	1734
FblI	GTMKAC	1 cut(s)	1672
Fnu4HI	GCNGC	9 cut(s)	841, 906, 1090, 1232, 1787, 1875, 1923, 2174, 2300
FokI	GGATG	8 cut(s)	1185, 1313, 1358, 1394, 2039, 2054, 2135, 2210
FriOI	GRGCYC	2 cut(s)	1282, 1442
Fsp4HI	GCNGC	9 cut(s)	841, 906, 1090, 1232, 1787, 1875, 1923, 2174, 2300
GlaI	GCGC	1 cut(s)	1450
GluI	GCNGC	9 cut(s)	841, 906, 1090, 1232, 1787, 1875, 1923, 2174, 2300
GsaI	CCCAGC	1 cut(s)	1728
GsuI	CTGGAG	2 cut(s)	27, 2247
HaeIII	GGCC	8 cut(s)	200, 217, 426, 533, 570, 1031, 1297, 1952
HapII	CCGG	5 cut(s)	139, 201, 519, 1841, 1942
HhaI	GCGC	1 cut(s)	1451
Hin6I	GCGC	1 cut(s)	1449
HinP1I	GCGC	1 cut(s)	1449
HincII	GTYRAC	1 cut(s)	343
HindII	GTYRAC	1 cut(s)	343
HinfI	GANTC	6 cut(s)	432, 459, 471, 1619, 1969, 2135
HpaII	CCGG	5 cut(s)	139, 201, 519, 1841, 1942
HphI	GGTGA	8 cut(s)	367, 397, 1063, 1293, 1393, 1855, 2000, 2296
Hpy166II	GTNNAC	7 cut(s)	343, 492, 750, 1182, 1673, 1963, 1981
Hpy188I	TCNGA	9 cut(s)	431, 562, 925, 940, 980, 1591, 1632, 2168, 2212
Hpy8I	GTNNAC	7 cut(s)	343, 492, 750, 1182, 1673, 1963, 1981
HpyAV	CCTTC	5 cut(s)	228, 247, 752, 1585, 2163
HpyCH4III	ACNGT	3 cut(s)	1075, 1750, 1960
HpyCH4IV	ACGT	4 cut(s)	47, 345, 1689, 1927
HpyF10VI	GCNNNNNNNGC	3 cut(s)	914, 1446, 1922
HpyF3I	CTNAG	9 cut(s)	421, 528, 535, 561, 664, 1185, 1286, 2054, 2318
HpySE526I	ACGT	4 cut(s)	47, 345, 1689, 1927
HspAI	GCGC	1 cut(s)	1449
KroI	GCCGGC	1 cut(s)	200
KroNI	GCCGGC	1 cut(s)	202
Kzo9I	GATC	8 cut(s)	327, 618, 1614, 1632, 1900, 2152, 2241, 2333
LmnI	GCTCC	5 cut(s)	8, 452, 1194, 1642, 2344
Lsp1109I	GCAGC	7 cut(s)	827, 917, 1076, 1218, 1773, 1861, 2286
LweI	GCATC	5 cut(s)	1380, 1557, 1641, 2020, 2113
MaeII	ACGT	4 cut(s)	47, 345, 1689, 1927
MaeIII	GTNAC	7 cut(s)	1069, 1260, 1750, 1843, 1954, 1988, 2348
MalI	GATC	8 cut(s)	329, 620, 1616, 1634, 1902, 2154, 2243, 2335
MboI	GATC	8 cut(s)	327, 618, 1614, 1632, 1900, 2152, 2241, 2333
MfeI	CAATTG	1 cut(s)	1806
MhlI	GDGCHC	4 cut(s)	391, 1282, 1442, 1983
MlyI	GAGTC	1 cut(s)	2129
MmeI	TCCRAC	3 cut(s)	852, 2004, 2146
Mph1103I	ATGCAT	1 cut(s)	1656
MroNI	GCCGGC	1 cut(s)	200
MroXI	GAANNNNTTC	1 cut(s)	945
MseI	TTAA	5 cut(s)	38, 69, 744, 1544, 2049
MslI	CAYNNNNRTG	4 cut(s)	485, 1049, 1130, 1986
MspA1I	CMGCKG	2 cut(s)	1564, 1728
MspI	CCGG	5 cut(s)	139, 201, 519, 1841, 1942
MspR9I	CCNGG	8 cut(s)	139, 197, 367, 456, 519, 1836, 1985, 2343
MunI	CAATTG	1 cut(s)	1806
MvaI	CCWGG	6 cut(s)	197, 367, 456, 1836, 1985, 2343
MvnI	CGCG	1 cut(s)	1905
MwoI	GCNNNNNNNGC	3 cut(s)	914, 1446, 1922
NaeI	GCCGGC	1 cut(s)	202
NciI	CCSGG	2 cut(s)	139, 519
NdeI	CATATG	1 cut(s)	1734
NdeII	GATC	8 cut(s)	327, 618, 1614, 1632, 1900, 2152, 2241, 2333
NgoMIV	GCCGGC	1 cut(s)	200
NlaIV	GGNNCC	1 cut(s)	216
NmeAIII	GCCGAG	1 cut(s)	1101
NmuCI	GTSAC	6 cut(s)	1069, 1750, 1843, 1954, 1988, 2348
NruI	TCGCGA	1 cut(s)	1905
NsiI	ATGCAT	1 cut(s)	1656
NspI	RCATGY	2 cut(s)	1786, 2254
OliI	CACNNNNGTG	1 cut(s)	1986
PagI	TCATGA	1 cut(s)	1714
PceI	AGGCCT	2 cut(s)	426, 533
PcsI	WCGNNNNNNNCGW	1 cut(s)	1695
PdiI	GCCGGC	1 cut(s)	202
PdmI	GAANNNNTTC	1 cut(s)	945
PfeI	GAWTC	5 cut(s)	432, 459, 471, 1619, 1969
PflFI	GACNNNGTC	1 cut(s)	1849
PfoI	TCCNGGA	1 cut(s)	454
PkrI	GCNGC	9 cut(s)	842, 907, 1091, 1233, 1788, 1876, 1924, 2175, 2301
PleI	GAGTC	1 cut(s)	2129
PpsI	GAGTC	1 cut(s)	2129
Ppu21I	YACGTR	2 cut(s)	1690, 1928
PpuMI	RGGWCCY	3 cut(s)	857, 1310, 1604
PsiI	TTATAA	2 cut(s)	90, 119
Psp5II	RGGWCCY	3 cut(s)	857, 1310, 1604
Psp6I	CCWGG	6 cut(s)	195, 365, 454, 1834, 1983, 2341
PspEI	GGTNACC	2 cut(s)	1843, 1988
PspFI	CCCAGC	1 cut(s)	1724
PspGI	CCWGG	6 cut(s)	195, 365, 454, 1834, 1983, 2341
PspN4I	GGNNCC	1 cut(s)	216
PspPI	GGNCC	9 cut(s)	215, 568, 857, 890, 1295, 1310, 1604, 1838, 1892
PspPPI	RGGWCCY	3 cut(s)	857, 1310, 1604
PstNI	CAGNNNCTG	1 cut(s)	2342
PsyI	GACNNNGTC	1 cut(s)	1849
PvuII	CAGCTG	2 cut(s)	1564, 1728
RruI	TCGCGA	1 cut(s)	1905
RsaI	GTAC	3 cut(s)	96, 1692, 2311
RsaNI	GTAC	3 cut(s)	95, 1691, 2310
RseI	CAYNNNNRTG	4 cut(s)	485, 1049, 1130, 1986
SaqAI	TTAA	5 cut(s)	38, 69, 744, 1544, 2049
SatI	GCNGC	9 cut(s)	841, 906, 1090, 1232, 1787, 1875, 1923, 2174, 2300
Sau3AI	GATC	8 cut(s)	327, 618, 1614, 1632, 1900, 2152, 2241, 2333
Sau96I	GGNCC	9 cut(s)	215, 568, 857, 890, 1295, 1310, 1604, 1838, 1892
SchI	GAGTC	1 cut(s)	2129
ScrFI	CCNGG	8 cut(s)	139, 197, 367, 456, 519, 1836, 1985, 2343
SduI	GDGCHC	4 cut(s)	391, 1282, 1442, 1983
SfaNI	GCATC	5 cut(s)	1380, 1557, 1641, 2020, 2113
SfcI	CTRYAG	1 cut(s)	684
SinI	GGWCC	6 cut(s)	857, 890, 1310, 1604, 1838, 1892
SmiMI	CAYNNNNRTG	4 cut(s)	485, 1049, 1130, 1986
SmlI	CTYRAG	2 cut(s)	158, 1597
SmoI	CTYRAG	2 cut(s)	158, 1597
SseBI	AGGCCT	2 cut(s)	426, 533
SsiI	CCGC	7 cut(s)	413, 893, 1393, 1890, 1922, 2173, 2228
SspI	AATATT	1 cut(s)	1793
StuI	AGGCCT	2 cut(s)	426, 533
StyD4I	CCNGG	8 cut(s)	137, 195, 365, 454, 517, 1834, 1983, 2341
StyI	CCWWGG	2 cut(s)	463, 1201
TaaI	ACNGT	3 cut(s)	1075, 1750, 1960
TaiI	ACGT	4 cut(s)	50, 348, 1692, 1930
TaqI	TCGA	5 cut(s)	1356, 1470, 1617, 1649, 2357
TaqII	GACCGA	1 cut(s)	277
TauI	GCSGC	2 cut(s)	1925, 2176
TfiI	GAWTC	5 cut(s)	432, 459, 471, 1619, 1969
Tru1I	TTAA	5 cut(s)	38, 69, 744, 1544, 2049
Tru9I	TTAA	5 cut(s)	38, 69, 744, 1544, 2049
TscAI	CASTG	1 cut(s)	1753
TseFI	GTSAC	6 cut(s)	1069, 1750, 1843, 1954, 1988, 2348
TseI	GCWGC	7 cut(s)	840, 905, 1089, 1231, 1786, 1874, 2299
Tsp45I	GTSAC	6 cut(s)	1069, 1750, 1843, 1954, 1988, 2348
TspGWI	ACGGA	2 cut(s)	2135, 2327
TspRI	CASTG	1 cut(s)	1753
Tth111I	GACNNNGTC	1 cut(s)	1849
VneI	GTGCAC	1 cut(s)	1979
VpaK11BI	GGWCC	6 cut(s)	857, 890, 1310, 1604, 1838, 1892
XapI	RAATTY	4 cut(s)	179, 926, 1546, 2362
XbaI	TCTAGA	1 cut(s)	82
XceI	RCATGY	2 cut(s)	1786, 2254
XcmI	CCANNNNNNNNNTGG	2 cut(s)	732, 1732
XmiI	GTMKAC	1 cut(s)	1672
XmnI	GAANNNNTTC	1 cut(s)	945
Zsp2I	ATGCAT	1 cut(s)	1656

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.