Rh1AG372300

cation H( ) antiporter 15-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
60622870 .. 60623852
983 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG372300.1

Sequence Viewer

Length: 273 bp
ATGTGTTATTCCTTCTACCTCCTAGTTCGTGTAGAAGATTGTGAACCTTTTAAGTTTGAAATGAATCCCCAGAGGGTGGCGTTGTTTTTCATTGGTGGCCCTGACTACCGCGAGGCGTTAGCCCATGCAACGCGCTTGACAGGCAATCCGAGAGTGCAAATGACGATTTTCAGGTTTATTTTGAAGAATAAAGACGAGCTTAGTGAAGAGGAGCTGGATGAGTCATTGGTGGAGGAGTTTAAGCTGAGACACCTGAGAACAATGATCGCGTGA

Protein Analysis

90

Amino Acids

10.71

Weight (kDa)

5.36

Isoelectric Point (pI)

37.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 76
AccII CGCG 3 cut(s) 111, 133, 269
AciI CCGC 1 cut(s) 109
AfiI CCNNNNNNNGG 1 cut(s) 76
AgsI TTSAA 2 cut(s) 59, 184
AluBI AGCT 3 cut(s) 199, 214, 244
AluI AGCT 3 cut(s) 199, 214, 244
Alw26I GTCTC 1 cut(s) 241
AoxI GGCC 1 cut(s) 97
AspLEI GCGC 1 cut(s) 135
AspS9I GGNCC 1 cut(s) 98
BcoDI GTCTC 1 cut(s) 241
BfaI CTAG 1 cut(s) 23
BmgT120I GGNCC 1 cut(s) 98
Bsc4I CCNNNNNNNGG 1 cut(s) 76
BseGI GGATG 1 cut(s) 223
BseLI CCNNNNNNNGG 1 cut(s) 76
BseMII CTCAG 2 cut(s) 236, 245
BseRI GAGGAG 2 cut(s) 224, 248
Bsh1236I CGCG 3 cut(s) 111, 133, 269
BshFI GGCC 1 cut(s) 99
BslI CCNNNNNNNGG 1 cut(s) 76
BsmAI GTCTC 1 cut(s) 241
BsnI GGCC 1 cut(s) 99
Bsp143I GATC 1 cut(s) 264
BspACI CCGC 1 cut(s) 109
BspANI GGCC 1 cut(s) 99
BspCNI CTCAG 2 cut(s) 237, 246
BspFNI CGCG 3 cut(s) 111, 133, 269
BssMI GATC 1 cut(s) 264
Bst6I CTCTTC 1 cut(s) 201
BstDEI CTNAG 3 cut(s) 200, 245, 254
BstF5I GGATG 1 cut(s) 223
BstFNI CGCG 3 cut(s) 111, 133, 269
BstHHI GCGC 1 cut(s) 135
BstKTI GATC 1 cut(s) 267
BstMAI GTCTC 1 cut(s) 241
BstMBI GATC 1 cut(s) 264
BstMWI GCNNNNNNNGC 1 cut(s) 141
BstUI CGCG 3 cut(s) 111, 133, 269
BsuRI GGCC 1 cut(s) 99
BtsCI GGATG 1 cut(s) 223
CfoI GCGC 1 cut(s) 135
Cfr13I GGNCC 1 cut(s) 98
CviAII CATG 1 cut(s) 125
CviJI RGCY 5 cut(s) 99, 122, 199, 214, 244
CviKI_1 RGCY 5 cut(s) 99, 122, 199, 214, 244
DdeI CTNAG 3 cut(s) 200, 245, 254
DpnI GATC 1 cut(s) 266
DpnII GATC 1 cut(s) 264
Eam1104I CTCTTC 1 cut(s) 201
EarI CTCTTC 1 cut(s) 201
FaeI CATG 1 cut(s) 128
FaiI YATR 1 cut(s) 126
FalI AAGNNNNNCTT 2 cut(s) 183, 215
FatI CATG 1 cut(s) 124
FokI GGATG 1 cut(s) 230
FspBI CTAG 1 cut(s) 23
GlaI GCGC 1 cut(s) 134
HaeIII GGCC 1 cut(s) 99
HhaI GCGC 1 cut(s) 135
Hin1II CATG 1 cut(s) 128
Hin6I GCGC 1 cut(s) 133
HinP1I GCGC 1 cut(s) 133
HinfI GANTC 2 cut(s) 64, 221
Hpy166II GTNNAC 1 cut(s) 44
Hpy188I TCNGA 1 cut(s) 150
Hpy8I GTNNAC 1 cut(s) 44
HpyAV CCTTC 1 cut(s) 22
HpyCH4V TGCA 2 cut(s) 128, 157
HpyF10VI GCNNNNNNNGC 1 cut(s) 141
HpyF3I CTNAG 3 cut(s) 200, 245, 254
Hsp92II CATG 1 cut(s) 128
HspAI GCGC 1 cut(s) 133
Kzo9I GATC 1 cut(s) 264
LmnI GCTCC 1 cut(s) 211
LpnPI CCDG 6 cut(s) 83, 114, 126, 157, 200, 266
MaeI CTAG 1 cut(s) 23
MalI GATC 1 cut(s) 266
MboI GATC 1 cut(s) 264
MboII GAAGA 3 cut(s) 47, 196, 218
MlyI GAGTC 1 cut(s) 230
MnlI CCTC 5 cut(s) 29, 66, 106, 202, 226
MseI TTAA 2 cut(s) 51, 240
MvnI CGCG 3 cut(s) 111, 133, 269
MwoI GCNNNNNNNGC 1 cut(s) 141
NdeII GATC 1 cut(s) 264
NlaIII CATG 1 cut(s) 128
PfeI GAWTC 1 cut(s) 64
PflMI CCANNNNNTGG 1 cut(s) 76
PleI GAGTC 1 cut(s) 229
PpsI GAGTC 1 cut(s) 229
PspPI GGNCC 1 cut(s) 98
SaqAI TTAA 2 cut(s) 51, 240
Sau3AI GATC 1 cut(s) 264
Sau96I GGNCC 1 cut(s) 98
SchI GAGTC 1 cut(s) 230
SetI ASST 7 cut(s) 21, 49, 176, 201, 216, 246, 255
SsiI CCGC 1 cut(s) 109
SspMI CTAG 1 cut(s) 23
TfiI GAWTC 1 cut(s) 64
Tru1I TTAA 2 cut(s) 51, 240
Tru9I TTAA 2 cut(s) 51, 240
TspDTI ATGAA 2 cut(s) 77, 79
Van91I CCANNNNNTGG 1 cut(s) 76
XspI CTAG 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.