Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0001152

Physical Location & Seq

Genomic Coordinates Forward (+)

30325645 .. 30328537

Gene Structure 2893 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1227600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGACAAGCTTAAGCAGTATCCCTAAGACTTACAAACCGGGATCAGAAATGGAGTTTTGTGGACCACTTCGCCCCCTATACTCCAAAGGCATCTGGGTAGGAGATAATCCTTTACAAAATCCGTTTTCGTTAATGTTGGCGCAAACCCTCCTCATCGTCATCACGTCCAGGGTGCTCTATTTTTTCCTGAGGCCTCTAGGACAAACCAAGCTGGTCTGCAGCCTCCTGGCTGGCATTATCATGGGGCCATCTGTGCTGGGGCGCAACAAGGAACTCAGGGACAGACTATTCCCCAATCAAGATTATCCTTTGTTTAGTACAATCTCTTGGCTCGGCGTAATATACTCTATATTCCTAATGGCAGTTAAATTGGACATTTCCATGGTCAGAAGGACAGCAAATAGCACCTGGAAGATTGGTCTTGCGGGCTTCATTTTCCCGTTGGCAGTCACCTTAACCATCCTTTCCCCGCTGGCCTGCAACGTTCGTGGACTCAGTGGAGGAAAGATCTTGGTCTTATTTTCTTCGCTTTCTCTATCGTACACTTATATCCCTAACATTGCTCAGGCCATGGATGATCTCAATCTTATGACTTCTGAGTTGGGGCAACTTGCCATGTCCTCTGCAATGCTCAGTGATATTATTCAATGGGCATTCACCACATTGCATTATATGTTTATGCAAAAGCATGGAATCCAAGGACTGGAGGCTTTCATTTCCTTGTTGGCATTGCTATATTTCTCTCTTCACGTCATACGACCAGCTCTACTGTTGATTATCAAGAAGACGCCCAAAGATTTAGAAGTGAAGGAAAGCTACATAGTTGCAATACAACTTGGGGTTCTTGTAATGGCATTTATCTCTGACTTCATAGGCACAGCGCCTACAACTGGTCCTTTAATTCTGGGGTTATCCATTCCACATGGGCCACCTCTGGGTGCAGCATTAGTACAGAAGACCGAATTCATGGTCTCCAAGTTTCTTCTGCCGACGTTCTTTTTCCGTGTTGGCTACACTATAGACGTGTATTCGATTCGCGATTGGAGCAGTTTTACCAAACTTCAGATTATCATTGTTGTGTCATATGTTGCCAAGATTGGGGCAATCACAGTGGCTGCATTGTGCTGCAAAATTAGGTTAAAAAATAGTCTCTTGCTCGGCGTCATCCTGAATATCAAGGGCATAATAGATCTTATCGCTTATAATCGATGGAAGACCATGGAGATGGTAGATGATCAATGTTTTACTCAAATCTTGTTGTCATTTCTGGTGGTGACGATGATCCTAACACCAATTGTACGATTCTCATACAAACCTCAAATACGGAGCTTAACATCAACCAAATTATGTTCAGCAGTCAGAAATATGCAATCAATGCCAAAAAGCAATGAAACATTTCGTATTCTTTGTTGTTTTCACAACCAAGAAAGTGTTCGCACCATCATCACCCTCCTTGAAGCCTCAAACCCAACAGATACAAGCCCCATTTGCGCCTACGTTGTCCACGCTGTCGAGCACATTGGTCCCGCCGGGCCAATGCTAATCCCTTACAAGAAGCAGAGGAAGACGTTTAAGCGCACAGATTCACCCACACGCCAAATGATGCGAGCCTTTGAGAATTACTCACTAAACTCCAGAGGACCGGTCACCATCCAAACCTACAAAATGATAGTTCCCTATAAATGCATGCACGAGACGATTTTCCATCTAGCGAATGACAAGCTTATACCTCTTATCATCGTACCATTTCATCAAAACCACCAGTCTATGGTCGGTTCTACCATGACTGCCGCCATACGCCAATTCAACATCAATGTACAAGCGTATGCCCCATGTACAGTTGGAATACTGGTTGACAGAGGTTTTTCTGCTAAGCATGGCTGGATCAGCCATTTCACCTATAATGTAGGGTTGTTTTTCATCGGTGGACCAGACGACCGTGAGGCGTTATCCTATGCATTCTGCATGTCAAGCAGCCCTGATGTGGGCCTTACGGTCTACAGGTTCACCTTTCGGAATGAATTGGAAGAAGAAGATGAAGAGGAAAAGAAGGAGGAAATGCTCGATGAGTCGTTGGTGGATGAGTTTAAGCTAAGGAATGTTGGGAATGATTGTTTGAATTGGATTGACATCGAGGTGGATGACAACGTACAGGTTATGGATACCATCAGGCAGTCGCAGGTCGAGTATGATCTTGTGATGGTGGGGCGACGGCATACGAACAAGGCATTGTCGGAGGAACAAATGGCAGAATTCATGGAAAATGCAGAGTTGGGAGTAATTGGTGACATGCTTGCTTCTCCTGATTTCTGTGGTGGGATGGTGAATGTACTGGTCATGCAAGAAACCAGGGGCTTAAGTCATAAAGGTTTTCGTAACGAATCCGCAAAAAGTTCGCTAAGTATGTTCAACTTTCATCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

808

Amino Acids

90.69

Weight (kDa)

8.46

Isoelectric Point (pI)

36.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	56 - 433	1.4e-34	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	526 - 623	6.2e-06	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	635 - 784	3.2e-09	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001152)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43690 FvH4_7g25211 FvH4_7g25250 FvH4_7g25290 FvH4_7g25310
malus_domestica	MD01G1158700.v1.1 MD01G1158800.v1.1 MD07G1227200.v1.1 MD07G1227600.v1.1
prunus_persica	Prupe.2G257000_v2.0.a1 Prupe.2G257100_v2.0.a1
pyrus_communis	pycom01g17540
rosa_chinensis	RchiOBHm_Chr1g0371191 RchiOBHm_Chr1g0371201 RchiOBHm_Chr1g0371211
rosa_laevigata	RLG00000026978 RLG00000026979 RLG00000026980 RLG00000026981 RLG00000026983 RLG00000036771
rosa_multiflora	Rmu_co8222838.1_g000001 Rmu_sc0000631.1_g000023 Rmu_sc0001018.1_g000042 Rmu_sc0001018.1_g000044 Rmu_sc0001018.1_g000049 Rmu_sc0001018.1_g000050 Rmu_sc0001018.1_g000051 Rmu_sc0008081.1_g000003
rosa_roxburghii	Rroxscaffold_4G00285900 Rroxscaffold_4G00285910
rosa_rugosa	Rorug01G0361700 Rorug01G0361900 Rorug01G0362000 Rorug01G0362200 Rorug05G0460600
rosa_samantha	Rh1AG372000 Rh1AG372200 Rh1AG372300 Rh1BG335100 Rh1BG335500 Rh1BG335700 Rh1BG335800 Rh1CG348600 Rh1CG349000 Rh1CG349100 Rh1CG349200 Rh1DG366500 Rh1DG366900 Rh1DG367000 Rh5BG537300 Rh5CG560800 Rh5DG548900
rosa_wichuraiana	Rw1G032720 Rw1G032730 Rw1G032740 Rw5G047750 Rw5G047880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1203
Acc36I	ACCTGC	1 cut(s)	2170
AccB7I	CCANNNNNTGG	2 cut(s)	703, 1768
AccI	GTMKAC	1 cut(s)	1998
AccII	CGCG	1 cut(s)	1038
AciI	CCGC	5 cut(s)	425, 470, 1527, 1791, 2385
AclI	AACGTT	1 cut(s)	483
AclWI	GGATC	3 cut(s)	49, 1276, 1892
AcsI	RAATTY	2 cut(s)	962, 2252
AcuI	CTGAAG	1 cut(s)	1046
AcyI	GRCGYC	2 cut(s)	788, 1161
AfaI	GTAC	9 cut(s)	319, 542, 951, 1299, 1743, 1818, 1837, 2151, 2331
AfiI	CCNNNNNNNGG	7 cut(s)	703, 890, 935, 1098, 1768, 1984, 1985
AflII	CTTAAG	2 cut(s)	10, 2356
AflIII	ACRYGT	1 cut(s)	1023
AgeI	ACCGGT	1 cut(s)	1642
AgsI	TTSAA	5 cut(s)	647, 1457, 1807, 2119, 2410
AjiI	CACGTC	3 cut(s)	165, 751, 1024
AjnI	CCWGG	4 cut(s)	167, 225, 407, 2348
AjuI	GAANNNNNNNTTGG	2 cut(s)	1416, 1448
AluBI	AGCT	7 cut(s)	9, 211, 764, 816, 1329, 1723, 2092
AluI	AGCT	7 cut(s)	9, 211, 764, 816, 1329, 1723, 2092
Alw21I	GWGCWC	2 cut(s)	177, 1518
Alw26I	GTCTC	3 cut(s)	976, 1154, 1688
AlwI	GGATC	3 cut(s)	49, 1276, 1892
AlwNI	CAGNNNCTG	1 cut(s)	1115
AoxI	GGCC	7 cut(s)	191, 245, 474, 567, 926, 1532, 1987
ApeKI	GCWGC	5 cut(s)	219, 941, 1115, 1125, 1974
ApoI	RAATTY	2 cut(s)	962, 2252
ArsI	GACNNNNNNTTYG	2 cut(s)	954, 986
AsiGI	ACCGGT	1 cut(s)	1642
Asp700I	GAANNNNTTC	2 cut(s)	1395, 1431
AspLEI	GCGC	5 cut(s)	142, 264, 883, 1493, 1578
AspS9I	GGNCC	9 cut(s)	62, 245, 893, 926, 1523, 1532, 1640, 1928, 1987
AsuC2I	CCSGG	2 cut(s)	39, 1531
AvaII	GGWCC	5 cut(s)	62, 893, 1523, 1640, 1928
AxyI	CCTNAGG	1 cut(s)	188
BarI	GAAGNNNNNNTAC	2 cut(s)	800, 832
BauI	CACGAG	1 cut(s)	1691
BbsI	GAAGAC	4 cut(s)	791, 962, 1220, 1571
Bbv12I	GWGCWC	2 cut(s)	177, 1518
BbvI	GCAGC	5 cut(s)	231, 953, 1102, 1112, 1986
BceAI	ACGGC	1 cut(s)	2228
BcgI	CGANNNNNNTGC	2 cut(s)	2376, 2410
BciT130I	CCWGG	4 cut(s)	169, 227, 409, 2350
BciVI	GTATCC	2 cut(s)	29, 2155
BclI	TGATCA	1 cut(s)	1234
BcnI	CCSGG	2 cut(s)	39, 1531
BcoDI	GTCTC	3 cut(s)	976, 1154, 1688
BfaI	CTAG	2 cut(s)	197, 1709
BfmI	CTRYAG	3 cut(s)	217, 1017, 1999
BfoI	RGCGCY	1 cut(s)	884
BfrI	CTTAAG	2 cut(s)	10, 2356
BfuAI	ACCTGC	1 cut(s)	2170
BfuI	GTATCC	2 cut(s)	29, 2155
BglII	AGATCT	2 cut(s)	507, 1189
BisI	GCNGC	6 cut(s)	220, 942, 1116, 1126, 1791, 1975
BlpI	GCTNAGC	1 cut(s)	1872
BlsI	GCNGC	6 cut(s)	221, 943, 1117, 1127, 1792, 1976
Bme1390I	CCNGG	6 cut(s)	39, 169, 227, 409, 1531, 2350
Bme18I	GGWCC	5 cut(s)	62, 893, 1523, 1640, 1928
BmgBI	CACGTC	3 cut(s)	165, 751, 1024
BmgT120I	GGNCC	9 cut(s)	62, 245, 893, 926, 1523, 1532, 1640, 1928, 1987
BmiI	GGNNCC	2 cut(s)	246, 1525
BmrFI	CCNGG	6 cut(s)	39, 169, 227, 409, 1531, 2350
BmsI	GCATC	2 cut(s)	99, 1593
BpiI	GAAGAC	4 cut(s)	791, 962, 1220, 1571
BplI	GAGNNNNNCTC	2 cut(s)	1607, 1639
BpmI	CTGGAG	2 cut(s)	725, 1618
Bpu10I	CCTNAGC	2 cut(s)	564, 2093
Bpu1102I	GCTNAGC	1 cut(s)	1872
BpuMI	CCSGG	2 cut(s)	39, 1531
Bsa29I	ATCGAT	2 cut(s)	1207, 2419
BsaBI	GATNNNNATC	2 cut(s)	582, 2129
BsaHI	GRCGYC	2 cut(s)	788, 1161
BsaI	GGTCTC	1 cut(s)	976
BsaJI	CCNNGG	6 cut(s)	168, 381, 570, 697, 1218, 2349
BsaWI	WCCGGW	1 cut(s)	1642
Bsc4I	CCNNNNNNNGG	7 cut(s)	703, 890, 935, 1098, 1768, 1984, 1985
Bse118I	RCCGGY	1 cut(s)	1642
Bse1I	ACTGG	5 cut(s)	708, 895, 1762, 1854, 2337
Bse21I	CCTNAGG	1 cut(s)	188
Bse3DI	GCAATG	5 cut(s)	558, 633, 662, 728, 1393
Bse8I	GATNNNNATC	2 cut(s)	582, 2129
BseBI	CCWGG	4 cut(s)	169, 227, 409, 2350
BseCI	ATCGAT	2 cut(s)	1207, 2419
BseDI	CCNNGG	6 cut(s)	168, 381, 570, 697, 1218, 2349
BseGI	GGATG	7 cut(s)	459, 580, 1164, 1650, 2086, 2146, 2325
BseJI	GATNNNNATC	2 cut(s)	582, 2129
BseLI	CCNNNNNNNGG	7 cut(s)	703, 890, 935, 1098, 1768, 1984, 1985
BseMI	GCAATG	5 cut(s)	558, 633, 662, 728, 1393
BseMII	CTCAG	6 cut(s)	179, 289, 508, 578, 588, 646
BseNI	ACTGG	5 cut(s)	708, 895, 1762, 1854, 2337
BseRI	GAGGAG	1 cut(s)	140
BseXI	GCAGC	5 cut(s)	231, 953, 1102, 1112, 1986
BseYI	CCCAGC	1 cut(s)	256
BsgI	GTGCAG	1 cut(s)	960
Bsh1236I	CGCG	1 cut(s)	1038
Bsh1285I	CGRYCG	1 cut(s)	1939
BshFI	GGCC	7 cut(s)	193, 247, 476, 569, 928, 1534, 1989
BshTI	ACCGGT	1 cut(s)	1642
BshVI	ATCGAT	2 cut(s)	1207, 2419
BsiEI	CGRYCG	1 cut(s)	1939
BsiHKAI	GWGCWC	2 cut(s)	177, 1518
BsiSI	CCGG	3 cut(s)	38, 1530, 1643
BslFI	GGGAC	2 cut(s)	293, 1509
BslI	CCNNNNNNNGG	7 cut(s)	703, 890, 935, 1098, 1768, 1984, 1985
BsmAI	GTCTC	3 cut(s)	976, 1154, 1688
BsmBI	CGTCTC	1 cut(s)	1688
BsmFI	GGGAC	2 cut(s)	293, 1509
BsmI	GAATGC	2 cut(s)	653, 1958
BsnI	GGCC	7 cut(s)	193, 247, 476, 569, 928, 1534, 1989
Bso31I	GGTCTC	1 cut(s)	976
Bsp1286I	GDGCHC	2 cut(s)	177, 1518
Bsp1407I	TGTACA	2 cut(s)	1816, 1835
Bsp143I	GATC	8 cut(s)	41, 507, 577, 1189, 1234, 1281, 1884, 2191
Bsp1720I	GCTNAGC	1 cut(s)	1872
Bsp19I	CCATGG	3 cut(s)	381, 570, 1218
Bsp68I	TCGCGA	1 cut(s)	1038
BspACI	CCGC	5 cut(s)	425, 470, 1527, 1791, 2385
BspANI	GGCC	7 cut(s)	193, 247, 476, 569, 928, 1534, 1989
BspCNI	CTCAG	6 cut(s)	180, 288, 507, 577, 589, 645
BspDI	ATCGAT	2 cut(s)	1207, 2419
BspFNI	CGCG	1 cut(s)	1038
BspLI	GGNNCC	2 cut(s)	246, 1525
BspMAI	CTGCAG	1 cut(s)	221
BspMI	ACCTGC	1 cut(s)	2170
BspPI	GGATC	3 cut(s)	49, 1276, 1892
BspTI	CTTAAG	2 cut(s)	10, 2356
BspTNI	GGTCTC	1 cut(s)	976
BsrDI	GCAATG	5 cut(s)	558, 633, 662, 728, 1393
BsrFI	RCCGGY	1 cut(s)	1642
BsrGI	TGTACA	2 cut(s)	1816, 1835
BsrI	ACTGG	5 cut(s)	708, 895, 1762, 1854, 2337
BssAI	RCCGGY	1 cut(s)	1642
BssECI	CCNNGG	6 cut(s)	168, 381, 570, 697, 1218, 2349
BssMI	GATC	8 cut(s)	41, 507, 577, 1189, 1234, 1281, 1884, 2191
BssNI	GRCGYC	2 cut(s)	788, 1161
BssSI	CACGAG	1 cut(s)	1691
BssT1I	CCWWGG	4 cut(s)	381, 570, 697, 1218
Bst2BI	CACGAG	1 cut(s)	1691
Bst2UI	CCWGG	4 cut(s)	169, 227, 409, 2350
Bst4CI	ACNGT	5 cut(s)	771, 1111, 1840, 1940, 1996
Bst6I	CTCTTC	2 cut(s)	750, 2034
BstACI	GRCGYC	2 cut(s)	788, 1161
BstAFI	CTTAAG	2 cut(s)	10, 2356
BstAPI	GCANNNNNTGC	1 cut(s)	1375
BstAUI	TGTACA	2 cut(s)	1816, 1835
BstC8I	GCNNGC	7 cut(s)	232, 427, 474, 478, 1608, 1688, 2295
BstDSI	CCRYGG	3 cut(s)	381, 570, 1218
BstEII	GGTNACC	1 cut(s)	1645
BstF5I	GGATG	7 cut(s)	459, 580, 1164, 1650, 2086, 2146, 2325
BstFNI	CGCG	1 cut(s)	1038
BstH2I	RGCGCY	1 cut(s)	884
BstHHI	GCGC	5 cut(s)	142, 264, 883, 1493, 1578
BstKTI	GATC	8 cut(s)	44, 510, 580, 1192, 1237, 1284, 1887, 2194
BstMAI	GTCTC	3 cut(s)	976, 1154, 1688
BstMBI	GATC	8 cut(s)	41, 507, 577, 1189, 1234, 1281, 1884, 2191
BstMCI	CGRYCG	1 cut(s)	1939
BstMWI	GCNNNNNNNGC	6 cut(s)	253, 1044, 1375, 1488, 1887, 1971
BstNI	CCWGG	4 cut(s)	169, 227, 409, 2350
BstNSI	RCATGY	3 cut(s)	1690, 1969, 2293
BstPI	GGTNACC	1 cut(s)	1645
BstSCI	CCNGG	6 cut(s)	37, 167, 225, 407, 1529, 2348
BstSFI	CTRYAG	3 cut(s)	217, 1017, 1999
BstUI	CGCG	1 cut(s)	1038
BstV1I	GCAGC	5 cut(s)	231, 953, 1102, 1112, 1986
BstV2I	GAAGAC	4 cut(s)	791, 962, 1220, 1571
BstX2I	RGATCY	2 cut(s)	507, 1189
BstXI	CCANNNNNNTGG	1 cut(s)	1225
BstYI	RGATCY	2 cut(s)	507, 1189
Bsu15I	ATCGAT	2 cut(s)	1207, 2419
Bsu36I	CCTNAGG	1 cut(s)	188
BsuI	GTATCC	2 cut(s)	29, 2155
BsuRI	GGCC	7 cut(s)	193, 247, 476, 569, 928, 1534, 1989
BsuTUI	ATCGAT	2 cut(s)	1207, 2419
BtgI	CCRYGG	3 cut(s)	381, 570, 1218
BtrI	CACGTC	3 cut(s)	165, 751, 1024
BtsCI	GGATG	7 cut(s)	459, 580, 1164, 1650, 2086, 2146, 2325
BtsIMutI	CAGTG	3 cut(s)	502, 640, 1116
BtuMI	TCGCGA	1 cut(s)	1038
BveI	ACCTGC	1 cut(s)	2170
Cac8I	GCNNGC	7 cut(s)	232, 427, 474, 478, 1608, 1688, 2295
CaiI	CAGNNNCTG	1 cut(s)	1115
CfoI	GCGC	5 cut(s)	142, 264, 883, 1493, 1578
Cfr10I	RCCGGY	1 cut(s)	1642
Cfr13I	GGNCC	9 cut(s)	62, 245, 893, 926, 1523, 1532, 1640, 1928, 1987
ClaI	ATCGAT	2 cut(s)	1207, 2419
CseI	GACGC	2 cut(s)	796, 1150
Csp6I	GTAC	9 cut(s)	318, 541, 950, 1298, 1742, 1817, 1836, 2150, 2330
CspAI	ACCGGT	1 cut(s)	1642
CspCI	CAANNNNNGTGG	4 cut(s)	469, 504, 1092, 1127
CviQI	GTAC	9 cut(s)	318, 541, 950, 1298, 1742, 1817, 1836, 2150, 2330
DpnI	GATC	8 cut(s)	43, 509, 579, 1191, 1236, 1283, 1886, 2193
DpnII	GATC	8 cut(s)	41, 507, 577, 1189, 1234, 1281, 1884, 2191
Eam1104I	CTCTTC	2 cut(s)	750, 2034
EarI	CTCTTC	2 cut(s)	750, 2034
Eco130I	CCWWGG	4 cut(s)	381, 570, 697, 1218
Eco147I	AGGCCT	1 cut(s)	193
Eco31I	GGTCTC	1 cut(s)	976
Eco47I	GGWCC	5 cut(s)	62, 893, 1523, 1640, 1928
Eco57I	CTGAAG	1 cut(s)	1046
Eco81I	CCTNAGG	1 cut(s)	188
Eco91I	GGTNACC	1 cut(s)	1645
EcoO65I	GGTNACC	1 cut(s)	1645
EcoRI	GAATTC	2 cut(s)	962, 2252
EcoRII	CCWGG	4 cut(s)	167, 225, 407, 2348
EcoT14I	CCWWGG	4 cut(s)	381, 570, 697, 1218
EcoT22I	ATGCAT	2 cut(s)	1688, 1960
ErhI	CCWWGG	4 cut(s)	381, 570, 697, 1218
Esp3I	CGTCTC	1 cut(s)	1688
FaqI	GGGAC	2 cut(s)	293, 1509
FauI	CCCGC	3 cut(s)	418, 477, 1534
FauNDI	CATATG	1 cut(s)	1084
FbaI	TGATCA	1 cut(s)	1234
FblI	GTMKAC	1 cut(s)	1998
Fnu4HI	GCNGC	6 cut(s)	220, 942, 1116, 1126, 1791, 1975
FokI	GGATG	7 cut(s)	446, 587, 1151, 1637, 2093, 2153, 2332
Fsp4HI	GCNGC	6 cut(s)	220, 942, 1116, 1126, 1791, 1975
FspBI	CTAG	2 cut(s)	197, 1709
GlaI	GCGC	5 cut(s)	141, 263, 882, 1492, 1577
GluI	GCNGC	6 cut(s)	220, 942, 1116, 1126, 1791, 1975
GsaI	CCCAGC	1 cut(s)	260
GsuI	CTGGAG	2 cut(s)	725, 1618
HaeII	RGCGCY	1 cut(s)	884
HaeIII	GGCC	7 cut(s)	193, 247, 476, 569, 928, 1534, 1989
HapII	CCGG	3 cut(s)	38, 1530, 1643
HgaI	GACGC	2 cut(s)	796, 1150
HhaI	GCGC	5 cut(s)	142, 264, 883, 1493, 1578
Hin1I	GRCGYC	2 cut(s)	788, 1161
Hin6I	GCGC	5 cut(s)	140, 262, 881, 1491, 1576
HinP1I	GCGC	5 cut(s)	140, 262, 881, 1491, 1576
HincII	GTYRAC	1 cut(s)	1855
HindII	GTYRAC	1 cut(s)	1855
HindIII	AAGCTT	2 cut(s)	7, 1721
HinfI	GANTC	7 cut(s)	492, 693, 1033, 1302, 1583, 2069, 2381
HpaII	CCGG	3 cut(s)	38, 1530, 1643
Hpy166II	GTNNAC	8 cut(s)	62, 491, 543, 1504, 1855, 1928, 1999, 2007
Hpy188I	TCNGA	8 cut(s)	46, 389, 598, 865, 1065, 1361, 2016, 2236
Hpy188III	TCNNGA	7 cut(s)	187, 299, 781, 1037, 1168, 1635, 2303
Hpy8I	GTNNAC	8 cut(s)	62, 491, 543, 1504, 1855, 1928, 1999, 2007
Hpy99I	CGWCG	2 cut(s)	994, 2214
HpyAV	CCTTC	3 cut(s)	384, 802, 2044
HpyCH4III	ACNGT	5 cut(s)	771, 1111, 1840, 1940, 1996
HpyCH4IV	ACGT	8 cut(s)	164, 483, 750, 992, 1023, 1497, 1568, 2148
HpyF10VI	GCNNNNNNNGC	6 cut(s)	253, 1044, 1375, 1488, 1887, 1971
HpySE526I	ACGT	8 cut(s)	164, 483, 750, 992, 1023, 1497, 1568, 2148
Hsp92I	GRCGYC	2 cut(s)	788, 1161
HspAI	GCGC	5 cut(s)	140, 262, 881, 1491, 1576
Ksp22I	TGATCA	1 cut(s)	1234
Kzo9I	GATC	8 cut(s)	41, 507, 577, 1189, 1234, 1281, 1884, 2191
LmnI	GCTCC	2 cut(s)	1044, 1326
Lsp1109I	GCAGC	5 cut(s)	231, 953, 1102, 1112, 1986
LweI	GCATC	2 cut(s)	99, 1593
MaeI	CTAG	2 cut(s)	197, 1709
MaeII	ACGT	8 cut(s)	164, 483, 750, 992, 1023, 1497, 1568, 2148
MaeIII	GTNAC	5 cut(s)	448, 1273, 1645, 2285, 2375
MalI	GATC	8 cut(s)	43, 509, 579, 1191, 1236, 1283, 1886, 2193
MboI	GATC	8 cut(s)	41, 507, 577, 1189, 1234, 1281, 1884, 2191
MfeI	CAATTG	1 cut(s)	1293
MflI	RGATCY	2 cut(s)	507, 1189
MhlI	GDGCHC	2 cut(s)	177, 1518
MlyI	GAGTC	2 cut(s)	486, 2078
MmeI	TCCRAC	2 cut(s)	1822, 2214
Mph1103I	ATGCAT	2 cut(s)	1688, 1960
MroXI	GAANNNNTTC	2 cut(s)	1395, 1431
MslI	CAYNNNNRTG	5 cut(s)	239, 380, 1076, 1223, 2135
MspA1I	CMGCKG	1 cut(s)	472
MspCI	CTTAAG	2 cut(s)	10, 2356
MspI	CCGG	3 cut(s)	38, 1530, 1643
MspR9I	CCNGG	6 cut(s)	39, 169, 227, 409, 1531, 2350
MunI	CAATTG	1 cut(s)	1293
Mva1269I	GAATGC	2 cut(s)	653, 1958
MvaI	CCWGG	4 cut(s)	169, 227, 409, 2350
MvnI	CGCG	1 cut(s)	1038
MwoI	GCNNNNNNNGC	6 cut(s)	253, 1044, 1375, 1488, 1887, 1971
NciI	CCSGG	2 cut(s)	39, 1531
NcoI	CCATGG	3 cut(s)	381, 570, 1218
NdeI	CATATG	1 cut(s)	1084
NdeII	GATC	8 cut(s)	41, 507, 577, 1189, 1234, 1281, 1884, 2191
NlaIV	GGNNCC	2 cut(s)	246, 1525
NmeAIII	GCCGAG	2 cut(s)	312, 1137
NmuCI	GTSAC	4 cut(s)	448, 1273, 1645, 2285
NruI	TCGCGA	1 cut(s)	1038
NsiI	ATGCAT	2 cut(s)	1688, 1960
NspI	RCATGY	3 cut(s)	1690, 1969, 2293
PaeI	GCATGC	1 cut(s)	1690
PceI	AGGCCT	1 cut(s)	193
PctI	GAATGC	2 cut(s)	653, 1958
PdmI	GAANNNNTTC	2 cut(s)	1395, 1431
PfeI	GAWTC	5 cut(s)	693, 1033, 1302, 1583, 2381
PflMI	CCANNNNNTGG	2 cut(s)	703, 1768
PinAI	ACCGGT	1 cut(s)	1642
PkrI	GCNGC	6 cut(s)	221, 943, 1117, 1127, 1792, 1976
PleI	GAGTC	2 cut(s)	486, 2077
PpsI	GAGTC	2 cut(s)	486, 2077
PsiI	TTATAA	1 cut(s)	1203
Psp1406I	AACGTT	1 cut(s)	483
Psp6I	CCWGG	4 cut(s)	167, 225, 407, 2348
PspEI	GGTNACC	1 cut(s)	1645
PspFI	CCCAGC	1 cut(s)	256
PspGI	CCWGG	4 cut(s)	167, 225, 407, 2348
PspN4I	GGNNCC	2 cut(s)	246, 1525
PspPI	GGNCC	9 cut(s)	62, 245, 893, 926, 1523, 1532, 1640, 1928, 1987
PstI	CTGCAG	1 cut(s)	221
PstNI	CAGNNNCTG	1 cut(s)	1115
PsuI	RGATCY	2 cut(s)	507, 1189
RruI	TCGCGA	1 cut(s)	1038
RsaI	GTAC	9 cut(s)	319, 542, 951, 1299, 1743, 1818, 1837, 2151, 2331
RsaNI	GTAC	9 cut(s)	318, 541, 950, 1298, 1742, 1817, 1836, 2150, 2330
RseI	CAYNNNNRTG	5 cut(s)	239, 380, 1076, 1223, 2135
SatI	GCNGC	6 cut(s)	220, 942, 1116, 1126, 1791, 1975
Sau3AI	GATC	8 cut(s)	41, 507, 577, 1189, 1234, 1281, 1884, 2191
Sau96I	GGNCC	9 cut(s)	62, 245, 893, 926, 1523, 1532, 1640, 1928, 1987
SchI	GAGTC	2 cut(s)	486, 2078
ScrFI	CCNGG	6 cut(s)	39, 169, 227, 409, 1531, 2350
SduI	GDGCHC	2 cut(s)	177, 1518
SfaNI	GCATC	2 cut(s)	99, 1593
SfcI	CTRYAG	3 cut(s)	217, 1017, 1999
SinI	GGWCC	5 cut(s)	62, 893, 1523, 1640, 1928
SmiMI	CAYNNNNRTG	5 cut(s)	239, 380, 1076, 1223, 2135
SmlI	CTYRAG	2 cut(s)	10, 2356
SmoI	CTYRAG	2 cut(s)	10, 2356
SphI	GCATGC	1 cut(s)	1690
SseBI	AGGCCT	1 cut(s)	193
SsiI	CCGC	5 cut(s)	425, 470, 1527, 1791, 2385
SspMI	CTAG	2 cut(s)	197, 1709
StuI	AGGCCT	1 cut(s)	193
StyD4I	CCNGG	6 cut(s)	37, 167, 225, 407, 1529, 2348
StyI	CCWWGG	4 cut(s)	381, 570, 697, 1218
TaaI	ACNGT	5 cut(s)	771, 1111, 1840, 1940, 1996
TaiI	ACGT	8 cut(s)	167, 486, 753, 995, 1026, 1500, 1571, 2151
TaqI	TCGA	7 cut(s)	1031, 1207, 1512, 2064, 2133, 2184, 2419
TaqII	GACCGA	1 cut(s)	974
TatI	WGTACW	5 cut(s)	317, 949, 1816, 1835, 2329
TauI	GCSGC	1 cut(s)	1793
TfiI	GAWTC	5 cut(s)	693, 1033, 1302, 1583, 2381
TscAI	CASTG	3 cut(s)	502, 640, 1116
TseFI	GTSAC	4 cut(s)	448, 1273, 1645, 2285
TseI	GCWGC	5 cut(s)	219, 941, 1115, 1125, 1974
Tsp45I	GTSAC	4 cut(s)	448, 1273, 1645, 2285
TspGWI	ACGGA	3 cut(s)	111, 992, 1339
TspRI	CASTG	3 cut(s)	502, 640, 1116
Van91I	CCANNNNNTGG	2 cut(s)	703, 1768
Vha464I	CTTAAG	2 cut(s)	10, 2356
VpaK11BI	GGWCC	5 cut(s)	62, 893, 1523, 1640, 1928
XapI	RAATTY	2 cut(s)	962, 2252
XceI	RCATGY	3 cut(s)	1690, 1969, 2293
XmiI	GTMKAC	1 cut(s)	1998
XmnI	GAANNNNTTC	2 cut(s)	1395, 1431
XspI	CTAG	2 cut(s)	197, 1709
Zsp2I	ATGCAT	2 cut(s)	1688, 1960

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.