Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0001152

Physical Location & Seq

Genomic Coordinates Reverse (-)

7440734 .. 7443694

Gene Structure 2961 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026981

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGCTCAATATGAGCAGACGACATCGTTTCGAGTATGTGTGCAACCGAGTGCCATTGCCTCCAAAGGGTTTTGGTTTAAAGAAAATCCTTTAGACTATGCATATCCTGCAACCCTAGCCCAAATTATCCTTGTCGTTGTGACCTCTCGGCTACTTTATTTTCTTCTCAAGCCTCTGGGACAGACCAAATTCTCTTGCAATCTCCTGGGTGGCTTTATCTTGGGTCCTTCTGTGCTAGGGCGTAACCAGGTTATAAGGGACAAACTATTTAATCCGAAAGATGCGTCGTTGTGCGCAACAATGGGTTTGCTGGGCGCTACATATGCCATGTTCATAACTGCAGTAAAATTTGACATAAGCATGATCAAAGGGACAAAGCTTTCTTTGAAGATTGGTGTTCCAGGGTTCCTTATTACCGTTGCGGTATCCTTAGGCCTCGGATACCCGCTAGCCAGCTTCATTGCTGGAATCAAAGGAGGATTCTTCCCCATATTTTTATTTTCTATTATTTCTTTCACTTTCTTCCCTGATATAGCTCCGGCATTAGAGGACCTCAACCTTATGAATTCTGAGTTGGGTCAAATTGCCACGTCCTCGGCTTTGCATTTTGAAATGATACAATGGTTGTTCTCAACAGTACAAGACATAGCTACTAAAGATAAAGCAATCCACGGAGCTTTGACTTTCATTTCCGCAGTGGTATTGCTTGTTTTCATTGTTTATGTCATACGCCCGCTTATGGTATCAATTGCTAGGAACACACCCGAAGGACAAGAAGTAAAGGAGTTTTATGTAGTAGCAATACTAGTTGGGGCTCTAGTCCTGTCGTTTATATCCGACGCAATAGGTTGCACCTTTGTTCTTGGTCCTGTAATTCTTGGGTTAGTCATACCAGATGGACCACCTCTAGGTGCAGCATTAGTAACCAAGACTGAATTCTTGGTCTCTGAACTTCTTCTTCCCGTGTTCTTTTTTCGTATTGGCTTCAGGATAAACGTACTGTCGATTAGCGATTGGAAGAGTTTTACCACATTGCAGGCCATCATTGTTGCATCATATGTGGCAAAGATGGTGGCAGTTACCGGGGCTGCATTGTGTTGCAAAATTAGTTTGAGAAATAGTCTTTTGCTCGGCATAATATTGAATATCCGGGGTATTATAGATTTGACCCTTTTCTCTCGATGGAGGTATAGTCAGCTCCTAAATGAACACGTTTATACTCAACTAGTGTTATCTGTGCTGATTGGGAACATGATTGCAACATCATTGGTACATTTCACATACAGACCTCATTTAAGACTTGGGCCATCACCCAAAGGTCCACGCATTAGAAACATCCAATCAGTTCAAAGCAACTCTCCTTTCGACATTCTTTGTTGTATCCACAACGAGGAAAGTATCCGCAACCTCACCTCCCTCCTAGAAGCCTCAAACCCAACAGAAGCAAGCCCTATTTGCGCTTACATTATCCAAGCAGTTGAGCTTGTGGGGCGGGCTGTACCTGTACTAGTCCCTTATAAGAAGAAGGAGGGAAACAAATTTAACCGAATAAATTCACTCACACATCATATGATGCAAGCCTTTTTGAACTACTCGGAAAACTCAAGTGGACCTGTCTTGATCCAATCATTCACTATGATCGCGCCCTATAAATTTATGCATGAGACCATTTGCCGTCTAGTGGATGACAATCTCGTACCTTTGGTTATCCTCCCATTTCATGAAAACCACCAGGTTATGGTTGACACCAACGTGACTGCCTCAATACGACAATTCAACAACAATGTGCAGGAATATTCATCGTGTACAGTTGGAATACTAGTTGAAAGAGGGTTGCCTGGTCGGCTGACCATGTCCCATTTCTCATACAATGTGGCTACATTTTTCATTGGCGGACCAGATGACCGCGAGGCTTTGGCCTTAGCAGCACGTATGTTAGGCAACCAGAATGTGGTCCTCACAGTATACAAGTTTATTGTGCGGAAAAAATTAAGCGAGGGTAACTATAATGAAGACGAGGAGATGGAGACCGGGCTGGATGAGTCGATGGTGGATGAGTTTAAGCTGAGGAATAATGGGAATGACGGCTTGAATTGGCGAGATATCGAGGTTGAGGACTCTGTACAGCTTATTGATGCAATTATGAACTCGCAGGGGGATTATGATCTAGTAATGGTTGGAAGGCGGCATGAGGACAGTTCATTGAGGGATGAGCAAATGTCAGAATTTGTGCATTATGCGGAGCTGGGAATGATCGGTGACATGCTTGCTTCTTCAGATTTCTGTGGTGGAATGGTGAATGTTTTGGTGTTGCAAGAAAGCAAGGAACTTAGTAGAAATTATGGATCAGCTTTTCGAAAAGATTTGGGAATGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

793

Amino Acids

87.71

Weight (kDa)

6.2

Isoelectric Point (pI)

35.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	48 - 424	3.6e-31	Sodium/hydrogen exchanger, transmembrane
CHX17_C	PF23259	623 - 773	4.1e-06	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001152)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43690 FvH4_7g25211 FvH4_7g25250 FvH4_7g25290 FvH4_7g25310
malus_domestica	MD01G1158700.v1.1 MD01G1158800.v1.1 MD07G1227200.v1.1 MD07G1227600.v1.1
prunus_persica	Prupe.2G257000_v2.0.a1 Prupe.2G257100_v2.0.a1
pyrus_communis	pycom01g17540
rosa_chinensis	RchiOBHm_Chr1g0371191 RchiOBHm_Chr1g0371201 RchiOBHm_Chr1g0371211
rosa_laevigata	RLG00000026978 RLG00000026979 RLG00000026980 RLG00000026981 RLG00000026983 RLG00000036771
rosa_multiflora	Rmu_co8222838.1_g000001 Rmu_sc0000631.1_g000023 Rmu_sc0001018.1_g000042 Rmu_sc0001018.1_g000044 Rmu_sc0001018.1_g000049 Rmu_sc0001018.1_g000050 Rmu_sc0001018.1_g000051 Rmu_sc0008081.1_g000003
rosa_roxburghii	Rroxscaffold_4G00285900 Rroxscaffold_4G00285910
rosa_rugosa	Rorug01G0361700 Rorug01G0361900 Rorug01G0362000 Rorug01G0362200 Rorug05G0460600
rosa_samantha	Rh1AG372000 Rh1AG372200 Rh1AG372300 Rh1BG335100 Rh1BG335500 Rh1BG335700 Rh1BG335800 Rh1CG348600 Rh1CG349000 Rh1CG349100 Rh1CG349200 Rh1DG366500 Rh1DG366900 Rh1DG367000 Rh5BG537300 Rh5CG560800 Rh5DG548900
rosa_wichuraiana	Rw1G032720 Rw1G032730 Rw1G032740 Rw5G047750 Rw5G047880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	254, 1518
Acc16I	TGCGCA	1 cut(s)	295
AccB7I	CCANNNNNTGG	2 cut(s)	1738, 1951
AccI	GTMKAC	1 cut(s)	1965
AccII	CGCG	2 cut(s)	1643, 1908
AclWI	GGATC	2 cut(s)	1615, 2353
AcsI	RAATTY	8 cut(s)	188, 347, 565, 935, 1538, 1552, 1652, 2225
AcuI	CTGAAG	2 cut(s)	970, 2259
AfaI	GTAC	8 cut(s)	639, 999, 1272, 1500, 1506, 1698, 1807, 2124
AfiI	CCNNNNNNNGG	7 cut(s)	66, 739, 908, 1390, 1681, 1738, 1951
AflIII	ACRYGT	1 cut(s)	1210
AgsI	TTSAA	8 cut(s)	388, 611, 1144, 1349, 1588, 1777, 1826, 2092
AhlI	ACTAGT	4 cut(s)	805, 1225, 1507, 1819
AjiI	CACGTC	1 cut(s)	591
AjnI	CCWGG	5 cut(s)	204, 246, 400, 1731, 1837
AjuI	GAANNNNNNNTTGG	4 cut(s)	557, 589, 920, 952
AleI	CACNNNNGTG	1 cut(s)	1751
Alw26I	GTCTC	3 cut(s)	949, 1658, 2021
AlwI	GGATC	2 cut(s)	1615, 2353
AoxI	GGCC	4 cut(s)	433, 1038, 1304, 1917
ApeKI	GCWGC	3 cut(s)	914, 1088, 1925
ApoI	RAATTY	8 cut(s)	188, 347, 565, 935, 1538, 1552, 1652, 2225
ArsI	GACNNNNNNTTYG	2 cut(s)	269, 301
Asp700I	GAANNNNTTC	2 cut(s)	954, 1552
AspLEI	GCGC	4 cut(s)	296, 317, 1460, 1645
AspS9I	GGNCC	9 cut(s)	224, 550, 866, 899, 1304, 1319, 1610, 1895, 1954
AsuC2I	CCSGG	3 cut(s)	1084, 1151, 2032
AsuHPI	GGTGA	4 cut(s)	1302, 1402, 2270, 2308
AsuII	TTCGAA	1 cut(s)	2356
AsuNHI	GCTAGC	1 cut(s)	448
AvaII	GGWCC	8 cut(s)	224, 550, 866, 899, 1319, 1610, 1895, 1954
AxyI	CCTNAGG	1 cut(s)	430
BaeI	ACNNNNGTAYC	2 cut(s)	608, 641
BanII	GRGCYC	1 cut(s)	817
BbsI	GAAGAC	1 cut(s)	2019
BbvCI	CCTCAGC	1 cut(s)	2066
BbvI	GCAGC	3 cut(s)	926, 1075, 1937
BccI	CCATC	7 cut(s)	890, 1049, 1063, 1176, 1315, 2017, 2041
BceAI	ACGGC	2 cut(s)	1659, 2101
BciT130I	CCWGG	5 cut(s)	206, 248, 402, 1733, 1839
BciVI	GTATCC	4 cut(s)	434, 436, 1391, 1409
BclI	TGATCA	1 cut(s)	363
BcnI	CCSGG	3 cut(s)	1084, 1151, 2032
BcoDI	GTCTC	3 cut(s)	949, 1658, 2021
BcuI	ACTAGT	4 cut(s)	805, 1225, 1507, 1819
BfmI	CTRYAG	1 cut(s)	339
BfoI	RGCGCY	1 cut(s)	318
BfuI	GTATCC	4 cut(s)	434, 436, 1391, 1409
BglI	GCCNNNNNGGC	1 cut(s)	1843
BisI	GCNGC	4 cut(s)	915, 1089, 1926, 2186
BlsI	GCNGC	4 cut(s)	916, 1090, 1927, 2187
Bme1390I	CCNGG	8 cut(s)	206, 248, 402, 1084, 1151, 1733, 1839, 2032
Bme18I	GGWCC	8 cut(s)	224, 550, 866, 899, 1319, 1610, 1895, 1954
BmgBI	CACGTC	1 cut(s)	591
BmgT120I	GGNCC	9 cut(s)	224, 550, 866, 899, 1304, 1319, 1610, 1895, 1954
BmiI	GGNNCC	2 cut(s)	225, 407
BmrFI	CCNGG	8 cut(s)	206, 248, 402, 1084, 1151, 1733, 1839, 2032
BmsI	GCATC	4 cut(s)	271, 1061, 1563, 2125
BmtI	GCTAGC	1 cut(s)	452
BpiI	GAAGAC	1 cut(s)	2019
Bpu10I	CCTNAGC	2 cut(s)	1921, 2066
Bpu14I	TTCGAA	1 cut(s)	2356
BpuEI	CTTGAG	2 cut(s)	152, 1588
BpuMI	CCSGG	3 cut(s)	1084, 1151, 2032
BsaAI	YACGTR	1 cut(s)	1931
BsaBI	GATNNNNATC	2 cut(s)	1689, 2163
BsaI	GGTCTC	3 cut(s)	949, 1658, 2021
BsaJI	CCNNGG	7 cut(s)	205, 401, 436, 594, 670, 1083, 1150
BsaXI	ACNNNNNCTCC	4 cut(s)	1177, 1207, 1397, 1427
Bsc4I	CCNNNNNNNGG	7 cut(s)	66, 739, 908, 1390, 1681, 1738, 1951
Bse21I	CCTNAGG	1 cut(s)	430
Bse3DI	GCAATG	3 cut(s)	54, 459, 1031
Bse8I	GATNNNNATC	2 cut(s)	1689, 2163
BseBI	CCWGG	5 cut(s)	206, 248, 402, 1733, 1839
BseDI	CCNNGG	7 cut(s)	205, 401, 436, 594, 670, 1083, 1150
BseGI	GGATG	5 cut(s)	1335, 1690, 2044, 2059, 2215
BseJI	GATNNNNATC	2 cut(s)	1689, 2163
BseLI	CCNNNNNNNGG	7 cut(s)	66, 739, 908, 1390, 1681, 1738, 1951
BseMI	GCAATG	3 cut(s)	54, 459, 1031
BseMII	CTCAG	2 cut(s)	561, 2057
BseRI	GAGGAG	1 cut(s)	2033
BseXI	GCAGC	3 cut(s)	926, 1075, 1937
BseYI	CCCAGC	2 cut(s)	310, 2245
BsgI	GTGCAG	2 cut(s)	933, 1808
Bsh1236I	CGCG	2 cut(s)	1643, 1908
BshFI	GGCC	4 cut(s)	435, 1040, 1306, 1919
BsiSI	CCGG	4 cut(s)	539, 1083, 1150, 2031
BslFI	GGGAC	5 cut(s)	192, 272, 385, 1496, 1840
BslI	CCNNNNNNNGG	7 cut(s)	66, 739, 908, 1390, 1681, 1738, 1951
BsmAI	GTCTC	3 cut(s)	949, 1658, 2021
BsmFI	GGGAC	5 cut(s)	192, 272, 385, 1496, 1840
BsnI	GGCC	4 cut(s)	435, 1040, 1306, 1919
Bso31I	GGTCTC	3 cut(s)	949, 1658, 2021
Bsp119I	TTCGAA	1 cut(s)	2356
Bsp1286I	GDGCHC	1 cut(s)	817
Bsp1407I	TGTACA	2 cut(s)	1805, 2122
Bsp143I	GATC	6 cut(s)	363, 1620, 1638, 2164, 2253, 2345
BspANI	GGCC	4 cut(s)	435, 1040, 1306, 1919
BspCNI	CTCAG	2 cut(s)	562, 2058
BspFNI	CGCG	2 cut(s)	1643, 1908
BspHI	TCATGA	1 cut(s)	1720
BspLI	GGNNCC	2 cut(s)	225, 407
BspMAI	CTGCAG	1 cut(s)	343
BspOI	GCTAGC	1 cut(s)	452
BspPI	GGATC	2 cut(s)	1615, 2353
BspT104I	TTCGAA	1 cut(s)	2356
BspTNI	GGTCTC	3 cut(s)	949, 1658, 2021
BsrDI	GCAATG	3 cut(s)	54, 459, 1031
BsrGI	TGTACA	2 cut(s)	1805, 2122
BssECI	CCNNGG	7 cut(s)	205, 401, 436, 594, 670, 1083, 1150
BssMI	GATC	6 cut(s)	363, 1620, 1638, 2164, 2253, 2345
BssNAI	GTATAC	1 cut(s)	1966
Bst1107I	GTATAC	1 cut(s)	1966
Bst2UI	CCWGG	5 cut(s)	206, 248, 402, 1733, 1839
Bst4CI	ACNGT	6 cut(s)	418, 637, 1002, 1810, 1963, 2198
Bst6I	CTCTTC	1 cut(s)	1013
BstAPI	GCANNNNNTGC	1 cut(s)	107
BstAUI	TGTACA	2 cut(s)	1805, 2122
BstBAI	YACGTR	1 cut(s)	1931
BstBI	TTCGAA	1 cut(s)	2356
BstC8I	GCNNGC	8 cut(s)	450, 454, 734, 1038, 1447, 1494, 1578, 2268
BstDEI	CTNAG	5 cut(s)	430, 570, 1921, 2066, 2330
BstDSI	CCRYGG	1 cut(s)	670
BstF5I	GGATG	5 cut(s)	1335, 1690, 2044, 2059, 2215
BstFNI	CGCG	2 cut(s)	1643, 1908
BstH2I	RGCGCY	1 cut(s)	318
BstHHI	GCGC	4 cut(s)	296, 317, 1460, 1645
BstKTI	GATC	6 cut(s)	366, 1623, 1641, 2167, 2256, 2348
BstMAI	GTCTC	3 cut(s)	949, 1658, 2021
BstMBI	GATC	6 cut(s)	363, 1620, 1638, 2164, 2253, 2345
BstMWI	GCNNNNNNNGC	7 cut(s)	107, 116, 323, 1455, 1489, 1843, 1925
BstNI	CCWGG	5 cut(s)	206, 248, 402, 1733, 1839
BstNSI	RCATGY	1 cut(s)	2266
BstSCI	CCNGG	8 cut(s)	204, 246, 400, 1082, 1149, 1731, 1837, 2030
BstSFI	CTRYAG	1 cut(s)	339
BstUI	CGCG	2 cut(s)	1643, 1908
BstV1I	GCAGC	3 cut(s)	926, 1075, 1937
BstV2I	GAAGAC	1 cut(s)	2019
BstZ17I	GTATAC	1 cut(s)	1966
Bsu36I	CCTNAGG	1 cut(s)	430
BsuI	GTATCC	4 cut(s)	434, 436, 1391, 1409
BsuRI	GGCC	4 cut(s)	435, 1040, 1306, 1919
BtgI	CCRYGG	1 cut(s)	670
BtrI	CACGTC	1 cut(s)	591
BtsCI	GGATG	5 cut(s)	1335, 1690, 2044, 2059, 2215
BtsI	GCAGTG	1 cut(s)	702
BtsIMutI	CAGTG	1 cut(s)	702
Cac8I	GCNNGC	8 cut(s)	450, 454, 734, 1038, 1447, 1494, 1578, 2268
CciI	TCATGA	1 cut(s)	1720
CfoI	GCGC	4 cut(s)	296, 317, 1460, 1645
Cfr13I	GGNCC	9 cut(s)	224, 550, 866, 899, 1304, 1319, 1610, 1895, 1954
CseI	GACGC	2 cut(s)	273, 848
CsiI	ACCWGGT	2 cut(s)	246, 1731
Csp6I	GTAC	8 cut(s)	638, 998, 1271, 1499, 1505, 1697, 1806, 2123
CspCI	CAANNNNNGTGG	2 cut(s)	1053, 1088
CviAII	CATG	8 cut(s)	328, 361, 1252, 1661, 1721, 1852, 2189, 2263
CviQI	GTAC	8 cut(s)	638, 998, 1271, 1499, 1505, 1697, 1806, 2123
DdeI	CTNAG	5 cut(s)	430, 570, 1921, 2066, 2330
DpnI	GATC	6 cut(s)	365, 1622, 1640, 2166, 2255, 2347
DpnII	GATC	6 cut(s)	363, 1620, 1638, 2164, 2253, 2345
DraI	TTTAAA	1 cut(s)	79
Eam1104I	CTCTTC	1 cut(s)	1013
EarI	CTCTTC	1 cut(s)	1013
EciI	GGCGGA	1 cut(s)	1908
Eco147I	AGGCCT	1 cut(s)	435
Eco24I	GRGCYC	1 cut(s)	817
Eco31I	GGTCTC	3 cut(s)	949, 1658, 2021
Eco32I	GATATC	1 cut(s)	2104
Eco47I	GGWCC	8 cut(s)	224, 550, 866, 899, 1319, 1610, 1895, 1954
Eco57I	CTGAAG	2 cut(s)	970, 2259
Eco81I	CCTNAGG	1 cut(s)	430
EcoO109I	RGGNCCY	2 cut(s)	224, 550
EcoRI	GAATTC	2 cut(s)	565, 935
EcoRII	CCWGG	5 cut(s)	204, 246, 400, 1731, 1837
EcoRV	GATATC	1 cut(s)	2104
EcoT22I	ATGCAT	2 cut(s)	103, 1662
EcoT38I	GRGCYC	1 cut(s)	817
FaeI	CATG	8 cut(s)	331, 364, 1255, 1664, 1724, 1855, 2192, 2266
FaqI	GGGAC	5 cut(s)	192, 272, 385, 1496, 1840
FatI	CATG	8 cut(s)	327, 360, 1251, 1660, 1720, 1851, 2188, 2262
FauI	CCCGC	3 cut(s)	453, 741, 1485
FauNDI	CATATG	3 cut(s)	322, 1057, 1569
FbaI	TGATCA	1 cut(s)	363
FblI	GTMKAC	1 cut(s)	1965
Fnu4HI	GCNGC	4 cut(s)	915, 1089, 1926, 2186
FokI	GGATG	5 cut(s)	1322, 1697, 2051, 2066, 2222
FriOI	GRGCYC	1 cut(s)	817
Fsp4HI	GCNGC	4 cut(s)	915, 1089, 1926, 2186
FspI	TGCGCA	1 cut(s)	295
GlaI	GCGC	4 cut(s)	295, 316, 1459, 1644
GluI	GCNGC	4 cut(s)	915, 1089, 1926, 2186
GsaI	CCCAGC	2 cut(s)	314, 2249
HaeII	RGCGCY	1 cut(s)	318
HaeIII	GGCC	4 cut(s)	435, 1040, 1306, 1919
HapII	CCGG	4 cut(s)	539, 1083, 1150, 2031
HgaI	GACGC	2 cut(s)	273, 848
HhaI	GCGC	4 cut(s)	296, 317, 1460, 1645
Hin1II	CATG	8 cut(s)	331, 364, 1255, 1664, 1724, 1855, 2192, 2266
Hin6I	GCGC	4 cut(s)	294, 315, 1458, 1643
HinP1I	GCGC	4 cut(s)	294, 315, 1458, 1643
HincII	GTYRAC	1 cut(s)	1744
HindII	GTYRAC	1 cut(s)	1744
HindIII	AAGCTT	1 cut(s)	377
HinfI	GANTC	4 cut(s)	468, 480, 2042, 2117
HpaII	CCGG	4 cut(s)	539, 1083, 1150, 2031
HphI	GGTGA	4 cut(s)	1302, 1402, 2270, 2308
Hpy166II	GTNNAC	5 cut(s)	1322, 1610, 1744, 1806, 1966
Hpy188I	TCNGA	8 cut(s)	276, 440, 571, 838, 949, 1597, 2224, 2278
Hpy188III	TCNNGA	4 cut(s)	988, 1179, 1618, 1721
Hpy8I	GTNNAC	5 cut(s)	1322, 1610, 1744, 1806, 1966
Hpy99I	CGWCG	2 cut(s)	289, 842
HpyAV	CCTTC	4 cut(s)	237, 761, 1519, 2175
HpyCH4III	ACNGT	6 cut(s)	418, 637, 1002, 1810, 1963, 2198
HpyCH4IV	ACGT	5 cut(s)	590, 996, 1212, 1752, 1930
HpyF10VI	GCNNNNNNNGC	7 cut(s)	107, 116, 323, 1455, 1489, 1843, 1925
HpyF3I	CTNAG	5 cut(s)	430, 570, 1921, 2066, 2330
HpySE526I	ACGT	5 cut(s)	590, 996, 1212, 1752, 1930
Hsp92II	CATG	8 cut(s)	331, 364, 1255, 1664, 1724, 1855, 2192, 2266
HspAI	GCGC	4 cut(s)	294, 315, 1458, 1643
Ksp22I	TGATCA	1 cut(s)	363
Kzo9I	GATC	6 cut(s)	363, 1620, 1638, 2164, 2253, 2345
LmnI	GCTCC	4 cut(s)	541, 674, 1203, 2242
Lsp1109I	GCAGC	3 cut(s)	926, 1075, 1937
LweI	GCATC	4 cut(s)	271, 1061, 1563, 2125
MabI	ACCWGGT	2 cut(s)	246, 1731
MaeII	ACGT	5 cut(s)	590, 996, 1212, 1752, 1930
MaeIII	GTNAC	7 cut(s)	139, 242, 922, 1078, 1753, 2000, 2258
MalI	GATC	6 cut(s)	365, 1622, 1640, 2166, 2255, 2347
MboI	GATC	6 cut(s)	363, 1620, 1638, 2164, 2253, 2345
MfeI	CAATTG	1 cut(s)	747
MhlI	GDGCHC	1 cut(s)	817
MlyI	GAGTC	2 cut(s)	2051, 2111
MmeI	TCCRAC	3 cut(s)	861, 1792, 2158
Mph1103I	ATGCAT	2 cut(s)	103, 1662
MroXI	GAANNNNTTC	2 cut(s)	954, 1552
MseI	TTAA	6 cut(s)	78, 270, 1295, 1542, 1991, 2061
MslI	CAYNNNNRTG	2 cut(s)	359, 1751
MspI	CCGG	4 cut(s)	539, 1083, 1150, 2031
MspR9I	CCNGG	8 cut(s)	206, 248, 402, 1084, 1151, 1733, 1839, 2032
MunI	CAATTG	1 cut(s)	747
MvaI	CCWGG	5 cut(s)	206, 248, 402, 1733, 1839
MvnI	CGCG	2 cut(s)	1643, 1908
MwoI	GCNNNNNNNGC	7 cut(s)	107, 116, 323, 1455, 1489, 1843, 1925
NciI	CCSGG	3 cut(s)	1084, 1151, 2032
NdeI	CATATG	3 cut(s)	322, 1057, 1569
NdeII	GATC	6 cut(s)	363, 1620, 1638, 2164, 2253, 2345
NheI	GCTAGC	1 cut(s)	448
NlaIII	CATG	8 cut(s)	331, 364, 1255, 1664, 1724, 1855, 2192, 2266
NlaIV	GGNNCC	2 cut(s)	225, 407
NmeAIII	GCCGAG	3 cut(s)	127, 575, 1110
NmuCI	GTSAC	3 cut(s)	139, 1753, 2258
NsbI	TGCGCA	1 cut(s)	295
NsiI	ATGCAT	2 cut(s)	103, 1662
NspI	RCATGY	1 cut(s)	2266
NspV	TTCGAA	1 cut(s)	2356
OliI	CACNNNNGTG	1 cut(s)	1751
PagI	TCATGA	1 cut(s)	1720
PceI	AGGCCT	1 cut(s)	435
PdmI	GAANNNNTTC	2 cut(s)	954, 1552
PfeI	GAWTC	2 cut(s)	468, 480
PflFI	GACNNNGTC	1 cut(s)	1852
PflMI	CCANNNNNTGG	2 cut(s)	1738, 1951
PkrI	GCNGC	4 cut(s)	916, 1090, 1927, 2187
PleI	GAGTC	2 cut(s)	2050, 2111
PpsI	GAGTC	2 cut(s)	2050, 2111
Ppu21I	YACGTR	1 cut(s)	1931
PpuMI	RGGWCCY	2 cut(s)	224, 550
PsiI	TTATAA	2 cut(s)	254, 1518
Psp5II	RGGWCCY	2 cut(s)	224, 550
Psp6I	CCWGG	5 cut(s)	204, 246, 400, 1731, 1837
PspFI	CCCAGC	2 cut(s)	310, 2245
PspGI	CCWGG	5 cut(s)	204, 246, 400, 1731, 1837
PspN4I	GGNNCC	2 cut(s)	225, 407
PspPI	GGNCC	9 cut(s)	224, 550, 866, 899, 1304, 1319, 1610, 1895, 1954
PspPPI	RGGWCCY	2 cut(s)	224, 550
PstI	CTGCAG	1 cut(s)	343
PsyI	GACNNNGTC	1 cut(s)	1852
RsaI	GTAC	8 cut(s)	639, 999, 1272, 1500, 1506, 1698, 1807, 2124
RsaNI	GTAC	8 cut(s)	638, 998, 1271, 1499, 1505, 1697, 1806, 2123
RseI	CAYNNNNRTG	2 cut(s)	359, 1751
SaqAI	TTAA	6 cut(s)	78, 270, 1295, 1542, 1991, 2061
SatI	GCNGC	4 cut(s)	915, 1089, 1926, 2186
Sau3AI	GATC	6 cut(s)	363, 1620, 1638, 2164, 2253, 2345
Sau96I	GGNCC	9 cut(s)	224, 550, 866, 899, 1304, 1319, 1610, 1895, 1954
SchI	GAGTC	2 cut(s)	2051, 2111
ScrFI	CCNGG	8 cut(s)	206, 248, 402, 1084, 1151, 1733, 1839, 2032
SduI	GDGCHC	1 cut(s)	817
SexAI	ACCWGGT	2 cut(s)	246, 1731
SfaNI	GCATC	4 cut(s)	271, 1061, 1563, 2125
SfcI	CTRYAG	1 cut(s)	339
SfuI	TTCGAA	1 cut(s)	2356
SinI	GGWCC	8 cut(s)	224, 550, 866, 899, 1319, 1610, 1895, 1954
SmiMI	CAYNNNNRTG	2 cut(s)	359, 1751
SmlI	CTYRAG	2 cut(s)	167, 1603
SmoI	CTYRAG	2 cut(s)	167, 1603
SpeI	ACTAGT	4 cut(s)	805, 1225, 1507, 1819
SseBI	AGGCCT	1 cut(s)	435
SspI	AATATT	2 cut(s)	1140, 1796
StuI	AGGCCT	1 cut(s)	435
StyD4I	CCNGG	8 cut(s)	204, 246, 400, 1082, 1149, 1731, 1837, 2030
TaaI	ACNGT	6 cut(s)	418, 637, 1002, 1810, 1963, 2198
TaiI	ACGT	5 cut(s)	593, 999, 1215, 1755, 1933
TaqI	TCGA	7 cut(s)	31, 1004, 1180, 1365, 2045, 2106, 2356
TatI	WGTACW	4 cut(s)	637, 1504, 1805, 2122
TauI	GCSGC	1 cut(s)	2188
TfiI	GAWTC	2 cut(s)	468, 480
Tru1I	TTAA	6 cut(s)	78, 270, 1295, 1542, 1991, 2061
Tru9I	TTAA	6 cut(s)	78, 270, 1295, 1542, 1991, 2061
TscAI	CASTG	1 cut(s)	702
TseFI	GTSAC	3 cut(s)	139, 1753, 2258
TseI	GCWGC	3 cut(s)	914, 1088, 1925
Tsp45I	GTSAC	3 cut(s)	139, 1753, 2258
TspGWI	ACGGA	1 cut(s)	687
TspRI	CASTG	1 cut(s)	702
Tth111I	GACNNNGTC	1 cut(s)	1852
Van91I	CCANNNNNTGG	2 cut(s)	1738, 1951
VpaK11BI	GGWCC	8 cut(s)	224, 550, 866, 899, 1319, 1610, 1895, 1954
XapI	RAATTY	8 cut(s)	188, 347, 565, 935, 1538, 1552, 1652, 2225
XceI	RCATGY	1 cut(s)	2266
XmiI	GTMKAC	1 cut(s)	1965
XmnI	GAANNNNTTC	2 cut(s)	954, 1552
Zsp2I	ATGCAT	2 cut(s)	103, 1662

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.