Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0001152

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG372000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGGCTCAGTATGAGCAGATGATATCGTTTCGAGTATGTGTGCAACCGAGTGCCATTGCCTCCAAAGGGTTTTGGTTTAAAGAAAATCCTTTAGACTATGCATTTCCTGCAACCCTAGCCCAAATTATCCTTGTCGTTGTGACCTCTCGGCTACTTTATTTTCTTCTCAAGCCTCTGGGACAGACCAAATTCTCTTGCAATCTCCTGGGTGGGTTTATCTTGGGTCCTTCTCTGCTAGGGCGTAACCAGGTTATAAGGGACAAACTATTTAATCCGAAACATGCGTCGTTGTGGGCAACAATGGGTCTGCTGGGCGCTACATATTCCATGTTCATAACTGCAGTAAAATTTGACATAAGCATGATCAAAGGGTCAAAGCATTCTTTGAAGATTGGTGTTCCAGGGTTCTTTATTACCGTTGCGATATCCTTAGGCCTCGGATACCCGCTAGCCACCTACATTGCTGGAATCAAAGGGGGATTCTTCCCCATATTTTTATTTTCTATTATTTCTTTCACTTTCTTCCCTGATATAGTTCCGGCCTTAGAGGACCTCAACCTTATGAATTCTGAGTTGGGTCAAATCGCCATGTCCTCGGCTTTGCATTTTGAAATGATACAATGGTTGTTCTCAACAGTACAAGAAATAGCTACTAAAGATAAAGCAATCCACGGAGCTTTGACATTCATTTCCGCAGTGGCATTGCTTGTTTTCATTGTTTATGTCATACGCCCGCTTATGGTATCAATTGCTAAGAACACACCCGAAGGACAACAAGTAAAGGAATTTTATGTAGTAGCAATACTAGCTGGGGCTCTAGTCCTGTCATTTATATCCGACGCAATAGGTTGCACCTTTGTTCTTGGTCCTGTAATTCTTGGGTTTGTCATACCAGATGGACCACCTCTGGGTGCAACATTAGTAACCAAGACTGAATTGTTAGTCTCTGAACTTCTTCTTCCCGTGTTCTTTTTTCGTATTGGCTTCAGGATAAACATACAGTCGATTAGCGATTGGAAGAGTTTTACCACATTGCAGGCCATCATCGGTGCATCATATGTGGCAAAGATGGTGGCAGTTACCGGGGCTGCATTGTGCTGCAAAATTAGTTTGAGAAATAGTCTCTTGCTCGGAATAATATTGAATATCCGTGGTATTATAGATTTGACCCTTTTCTCTCGATGGAGGTATAGTCAGCTCCTAGATCAACGCGTCTATACTCAGCTAGTGTTATCTGTGCTGATTGGGAACATGATTGCAACATCATTGGTACATTTCACATACAGGCCTCATTTAAGACTCGGGCCATCACCCAAAGGTCCACGCATTAGAAACATCCAATCAGTTCAAAGCAACTCTCCTTTCGACATTCTTTGTTGTATCCACAGCGAGGAAAGTATCCGCAACCTCACCTCCCTCCTAGAAGCCTCAAACCCAACAGAATCAAGCCCCATTTGCGCTTATATTATCCATGCAGTCGAACTTGTGGGGCGGGCTGCACCTGTACTAGTCCCTTACAAGAAGAAGAAGGAGGGGAACAAACTTAGCCGAATAAGTTCACTCACACATCATATGATGCAAGCATTTTTGAACTACTCGGAAAACTCAAGTGGTCCTGTCTTGATCCAATCATTCACTATGATCGCGCCCTATAAATCAATGCATGAGACCATTTGCCGTGTAGTGCATGACAATCTCGTACCTTTGGTTATCCTCCCATTTCATGAAAACCACCAGGTTATGGTTGGCACCAACGTGACTGCCGCAATACGCCAATTCAACAACAATGTGCAGGAATATTCATCGTGTACAGTTGGAATACTAGTTGAAAGAGGATTTCCTGGTCGGCTGACCTTGTCCCATTTCTCATACAATGTGGCTACATTTTTCATTGGCGGACCAGATGACCGCGAGGCTTTGGCCTTAGCAGCACGTATGTTAGGCAACCATAATGTGGTCCTCACAGTATACAGGATTATTACTGTGCCACAAAAATTAAGCGAGGGTAACTATAATGAAGACGAGGAGATGGAGGCAAGGCTGGATGAGTCGATGGTGGATGAGTTTAAGCTGAGAAATAATGGGGATAATTGCTTGAATTGGCGAGATATCGAGGTTCAGGACTCTGTACAGCTTATGGATGCAATTATGAACTCGCAGGGGGATTATGATCTTGTAATGGTTGGAAGGCGGCATGCGGACAGTTCATTAAGGGACGAGGAAATGTCAGAATTCGTGCATTATGCGGAGCTGGGAATGATAGGCGACATGCTTGCTTCTTCAGATTTCTGCAGTGGAATGGTGAATGTTTTGGTGTTGCAAGAAAGCAGAGAACTGAGTAGAAATTATGGATCAGCTTTTGGAAGTGGCTTCTCGAAAAATTTGGGAATGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

798

Amino Acids

88.34

Weight (kDa)

7.26

Isoelectric Point (pI)

39.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	48 - 424	9.3e-32	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	486 - 617	4.4e-06	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	624 - 775	2.1e-07	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001152)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43690 FvH4_7g25211 FvH4_7g25250 FvH4_7g25290 FvH4_7g25310
malus_domestica	MD01G1158700.v1.1 MD01G1158800.v1.1 MD07G1227200.v1.1 MD07G1227600.v1.1
prunus_persica	Prupe.2G257000_v2.0.a1 Prupe.2G257100_v2.0.a1
pyrus_communis	pycom01g17540
rosa_chinensis	RchiOBHm_Chr1g0371191 RchiOBHm_Chr1g0371201 RchiOBHm_Chr1g0371211
rosa_laevigata	RLG00000026978 RLG00000026979 RLG00000026980 RLG00000026981 RLG00000026983 RLG00000036771
rosa_multiflora	Rmu_co8222838.1_g000001 Rmu_sc0000631.1_g000023 Rmu_sc0001018.1_g000042 Rmu_sc0001018.1_g000044 Rmu_sc0001018.1_g000049 Rmu_sc0001018.1_g000050 Rmu_sc0001018.1_g000051 Rmu_sc0008081.1_g000003
rosa_roxburghii	Rroxscaffold_4G00285900 Rroxscaffold_4G00285910
rosa_rugosa	Rorug01G0361700 Rorug01G0361900 Rorug01G0362000 Rorug01G0362200 Rorug05G0460600
rosa_samantha	Rh1AG372000 Rh1AG372200 Rh1AG372300 Rh1BG335100 Rh1BG335500 Rh1BG335700 Rh1BG335800 Rh1CG348600 Rh1CG349000 Rh1CG349100 Rh1CG349200 Rh1DG366500 Rh1DG366900 Rh1DG367000 Rh5BG537300 Rh5CG560800 Rh5DG548900
rosa_wichuraiana	Rw1G032720 Rw1G032730 Rw1G032740 Rw5G047750 Rw5G047880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	254
AccB1I	GGYRCC	1 cut(s)	1748
AccB7I	CCANNNNNTGG	2 cut(s)	1741, 1954
AccI	GTMKAC	1 cut(s)	1968
AccII	CGCG	3 cut(s)	1212, 1646, 1911
AclWI	GGATC	2 cut(s)	1618, 2359
AcsI	RAATTY	6 cut(s)	188, 347, 565, 785, 2231, 2380
AcuI	CTGAAG	2 cut(s)	970, 2265
AfaI	GTAC	6 cut(s)	639, 1272, 1506, 1701, 1810, 2130
AfiI	CCNNNNNNNGG	6 cut(s)	66, 739, 908, 1390, 1741, 1954
AflIII	ACRYGT	1 cut(s)	1210
AgsI	TTSAA	8 cut(s)	388, 611, 1144, 1349, 1591, 1780, 1829, 2098
AhlI	ACTAGT	2 cut(s)	1507, 1822
AjnI	CCWGG	5 cut(s)	204, 246, 400, 1734, 1840
AjuI	GAANNNNNNNTTGG	2 cut(s)	557, 589
AleI	CACNNNNGTG	1 cut(s)	1754
AluBI	AGCT	9 cut(s)	650, 677, 809, 1198, 1225, 2071, 2134, 2251, 2357
AluI	AGCT	9 cut(s)	650, 677, 809, 1198, 1225, 2071, 2134, 2251, 2357
Alw26I	GTCTC	3 cut(s)	949, 1127, 1661
AlwI	GGATC	2 cut(s)	1618, 2359
Ama87I	CYCGRG	1 cut(s)	1301
AoxI	GGCC	6 cut(s)	433, 540, 1038, 1286, 1304, 1920
ApeKI	GCWGC	4 cut(s)	1088, 1098, 1496, 1928
ApoI	RAATTY	6 cut(s)	188, 347, 565, 785, 2231, 2380
ArsI	GACNNNNNNTTYG	2 cut(s)	269, 301
Asp700I	GAANNNNTTC	2 cut(s)	954, 1555
AspLEI	GCGC	3 cut(s)	317, 1460, 1648
AspS9I	GGNCC	9 cut(s)	224, 550, 866, 899, 1304, 1319, 1613, 1898, 1957
AsuC2I	CCSGG	1 cut(s)	1084
AsuHPI	GGTGA	3 cut(s)	1302, 1402, 2314
AsuNHI	GCTAGC	1 cut(s)	448
AvaI	CYCGRG	1 cut(s)	1301
AvaII	GGWCC	8 cut(s)	224, 550, 866, 899, 1319, 1613, 1898, 1957
AxyI	CCTNAGG	1 cut(s)	430
BaeI	ACNNNNGTAYC	2 cut(s)	608, 641
BanI	GGYRCC	1 cut(s)	1748
BanII	GRGCYC	1 cut(s)	817
BbsI	GAAGAC	1 cut(s)	2025
BbvI	GCAGC	4 cut(s)	1075, 1085, 1483, 1940
BccI	CCATC	7 cut(s)	890, 1049, 1063, 1176, 1315, 2023, 2047
BceAI	ACGGC	1 cut(s)	1662
BcgI	CGANNNNNNTGC	2 cut(s)	2255, 2289
BciT130I	CCWGG	5 cut(s)	206, 248, 402, 1736, 1842
BciVI	GTATCC	3 cut(s)	434, 1391, 1409
BclI	TGATCA	1 cut(s)	363
BcnI	CCSGG	1 cut(s)	1084
BcoDI	GTCTC	3 cut(s)	949, 1127, 1661
BcuI	ACTAGT	2 cut(s)	1507, 1822
BfmI	CTRYAG	2 cut(s)	339, 2290
BfoI	RGCGCY	1 cut(s)	318
BfuI	GTATCC	3 cut(s)	434, 1391, 1409
BisI	GCNGC	6 cut(s)	1089, 1099, 1497, 1764, 1929, 2192
BlsI	GCNGC	6 cut(s)	1090, 1100, 1498, 1765, 1930, 2193
Bme1390I	CCNGG	6 cut(s)	206, 248, 402, 1084, 1736, 1842
Bme18I	GGWCC	8 cut(s)	224, 550, 866, 899, 1319, 1613, 1898, 1957
BmeT110I	CYCGRG	1 cut(s)	1301
BmgT120I	GGNCC	9 cut(s)	224, 550, 866, 899, 1304, 1319, 1613, 1898, 1957
BmiI	GGNNCC	2 cut(s)	225, 1750
BmrFI	CCNGG	6 cut(s)	206, 248, 402, 1084, 1736, 1842
BmsI	GCATC	3 cut(s)	1061, 1566, 2131
BmtI	GCTAGC	1 cut(s)	452
BpiI	GAAGAC	1 cut(s)	2025
Bpu10I	CCTNAGC	1 cut(s)	1924
BpuEI	CTTGAG	2 cut(s)	152, 1591
BpuMI	CCSGG	1 cut(s)	1084
BsaAI	YACGTR	1 cut(s)	1934
BsaBI	GATNNNNATC	1 cut(s)	2169
BsaI	GGTCTC	1 cut(s)	1661
BsaJI	CCNNGG	7 cut(s)	205, 401, 436, 594, 670, 1083, 1150
BsaXI	ACNNNNNCTCC	4 cut(s)	1177, 1207, 1397, 1427
Bsc4I	CCNNNNNNNGG	6 cut(s)	66, 739, 908, 1390, 1741, 1954
Bse21I	CCTNAGG	1 cut(s)	430
Bse3DI	GCAATG	4 cut(s)	54, 459, 701, 1031
Bse8I	GATNNNNATC	1 cut(s)	2169
BseBI	CCWGG	5 cut(s)	206, 248, 402, 1736, 1842
BseDI	CCNNGG	7 cut(s)	205, 401, 436, 594, 670, 1083, 1150
BseGI	GGATG	4 cut(s)	1335, 2050, 2065, 2146
BseJI	GATNNNNATC	1 cut(s)	2169
BseLI	CCNNNNNNNGG	6 cut(s)	66, 739, 908, 1390, 1741, 1954
BseMI	GCAATG	4 cut(s)	54, 459, 701, 1031
BseMII	CTCAG	5 cut(s)	20, 561, 1235, 2063, 2327
BseRI	GAGGAG	1 cut(s)	2039
BseXI	GCAGC	4 cut(s)	1075, 1085, 1483, 1940
BseYI	CCCAGC	3 cut(s)	310, 809, 2251
BsgI	GTGCAG	2 cut(s)	1482, 1811
Bsh1236I	CGCG	3 cut(s)	1212, 1646, 1911
BshFI	GGCC	6 cut(s)	435, 542, 1040, 1288, 1306, 1922
BshNI	GGYRCC	1 cut(s)	1748
BsiHKCI	CYCGRG	1 cut(s)	1301
BsiSI	CCGG	2 cut(s)	539, 1083
BslFI	GGGAC	5 cut(s)	192, 272, 1496, 1843, 2228
BslI	CCNNNNNNNGG	6 cut(s)	66, 739, 908, 1390, 1741, 1954
BsmAI	GTCTC	3 cut(s)	949, 1127, 1661
BsmFI	GGGAC	5 cut(s)	192, 272, 1496, 1843, 2228
BsmI	GAATGC	1 cut(s)	379
BsnI	GGCC	6 cut(s)	435, 542, 1040, 1288, 1306, 1922
Bso31I	GGTCTC	1 cut(s)	1661
BsoBI	CYCGRG	1 cut(s)	1301
Bsp1286I	GDGCHC	1 cut(s)	817
Bsp1407I	TGTACA	2 cut(s)	1808, 2128
Bsp143I	GATC	6 cut(s)	363, 1204, 1623, 1641, 2170, 2351
BspANI	GGCC	6 cut(s)	435, 542, 1040, 1288, 1306, 1922
BspCNI	CTCAG	5 cut(s)	19, 562, 1234, 2064, 2328
BspFNI	CGCG	3 cut(s)	1212, 1646, 1911
BspHI	TCATGA	1 cut(s)	1723
BspLI	GGNNCC	2 cut(s)	225, 1750
BspMAI	CTGCAG	2 cut(s)	343, 2294
BspOI	GCTAGC	1 cut(s)	452
BspPI	GGATC	2 cut(s)	1618, 2359
BspT107I	GGYRCC	1 cut(s)	1748
BspTNI	GGTCTC	1 cut(s)	1661
BsrDI	GCAATG	4 cut(s)	54, 459, 701, 1031
BsrGI	TGTACA	2 cut(s)	1808, 2128
BssECI	CCNNGG	7 cut(s)	205, 401, 436, 594, 670, 1083, 1150
BssMI	GATC	6 cut(s)	363, 1204, 1623, 1641, 2170, 2351
BssNAI	GTATAC	1 cut(s)	1969
Bst1107I	GTATAC	1 cut(s)	1969
Bst2UI	CCWGG	5 cut(s)	206, 248, 402, 1736, 1842
Bst4CI	ACNGT	7 cut(s)	418, 637, 1002, 1813, 1966, 1984, 2204
Bst6I	CTCTTC	1 cut(s)	1013
BstAPI	GCANNNNNTGC	1 cut(s)	107
BstAUI	TGTACA	2 cut(s)	1808, 2128
BstBAI	YACGTR	1 cut(s)	1934
BstC8I	GCNNGC	7 cut(s)	450, 734, 1038, 1494, 1581, 2196, 2274
BstDSI	CCRYGG	2 cut(s)	670, 1150
BstF5I	GGATG	4 cut(s)	1335, 2050, 2065, 2146
BstFNI	CGCG	3 cut(s)	1212, 1646, 1911
BstH2I	RGCGCY	1 cut(s)	318
BstHHI	GCGC	3 cut(s)	317, 1460, 1648
BstKTI	GATC	6 cut(s)	366, 1207, 1626, 1644, 2173, 2354
BstMAI	GTCTC	3 cut(s)	949, 1127, 1661
BstMBI	GATC	6 cut(s)	363, 1204, 1623, 1641, 2170, 2351
BstMWI	GCNNNNNNNGC	5 cut(s)	107, 116, 806, 1455, 1928
BstNI	CCWGG	5 cut(s)	206, 248, 402, 1736, 1842
BstNSI	RCATGY	3 cut(s)	284, 2198, 2272
BstSCI	CCNGG	6 cut(s)	204, 246, 400, 1082, 1734, 1840
BstSFI	CTRYAG	2 cut(s)	339, 2290
BstUI	CGCG	3 cut(s)	1212, 1646, 1911
BstV1I	GCAGC	4 cut(s)	1075, 1085, 1483, 1940
BstV2I	GAAGAC	1 cut(s)	2025
BstZ17I	GTATAC	1 cut(s)	1969
Bsu36I	CCTNAGG	1 cut(s)	430
BsuI	GTATCC	3 cut(s)	434, 1391, 1409
BsuRI	GGCC	6 cut(s)	435, 542, 1040, 1288, 1306, 1922
BtgI	CCRYGG	2 cut(s)	670, 1150
BtsCI	GGATG	4 cut(s)	1335, 2050, 2065, 2146
BtsI	GCAGTG	2 cut(s)	702, 2299
BtsIMutI	CAGTG	2 cut(s)	702, 2299
Cac8I	GCNNGC	7 cut(s)	450, 734, 1038, 1494, 1581, 2196, 2274
CciI	TCATGA	1 cut(s)	1723
CfoI	GCGC	3 cut(s)	317, 1460, 1648
Cfr13I	GGNCC	9 cut(s)	224, 550, 866, 899, 1304, 1319, 1613, 1898, 1957
CseI	GACGC	3 cut(s)	273, 848, 1201
CsiI	ACCWGGT	2 cut(s)	246, 1734
Csp6I	GTAC	6 cut(s)	638, 1271, 1505, 1700, 1809, 2129
CspCI	CAANNNNNGTGG	4 cut(s)	442, 477, 1053, 1088
CviQI	GTAC	6 cut(s)	638, 1271, 1505, 1700, 1809, 2129
DpnI	GATC	6 cut(s)	365, 1206, 1625, 1643, 2172, 2353
DpnII	GATC	6 cut(s)	363, 1204, 1623, 1641, 2170, 2351
DraI	TTTAAA	1 cut(s)	79
Eam1104I	CTCTTC	1 cut(s)	1013
EarI	CTCTTC	1 cut(s)	1013
EciI	GGCGGA	1 cut(s)	1911
Eco147I	AGGCCT	2 cut(s)	435, 1288
Eco24I	GRGCYC	1 cut(s)	817
Eco31I	GGTCTC	1 cut(s)	1661
Eco32I	GATATC	3 cut(s)	24, 426, 2110
Eco47I	GGWCC	8 cut(s)	224, 550, 866, 899, 1319, 1613, 1898, 1957
Eco57I	CTGAAG	2 cut(s)	970, 2265
Eco81I	CCTNAGG	1 cut(s)	430
Eco88I	CYCGRG	1 cut(s)	1301
EcoO109I	RGGNCCY	2 cut(s)	224, 550
EcoRI	GAATTC	2 cut(s)	565, 2231
EcoRII	CCWGG	5 cut(s)	204, 246, 400, 1734, 1840
EcoRV	GATATC	3 cut(s)	24, 426, 2110
EcoT22I	ATGCAT	2 cut(s)	103, 1665
EcoT38I	GRGCYC	1 cut(s)	817
FaqI	GGGAC	5 cut(s)	192, 272, 1496, 1843, 2228
FauI	CCCGC	3 cut(s)	453, 741, 1485
FauNDI	CATATG	2 cut(s)	1057, 1572
FbaI	TGATCA	1 cut(s)	363
FblI	GTMKAC	1 cut(s)	1968
Fnu4HI	GCNGC	6 cut(s)	1089, 1099, 1497, 1764, 1929, 2192
FokI	GGATG	4 cut(s)	1322, 2057, 2072, 2153
FriOI	GRGCYC	1 cut(s)	817
Fsp4HI	GCNGC	6 cut(s)	1089, 1099, 1497, 1764, 1929, 2192
GlaI	GCGC	3 cut(s)	316, 1459, 1647
GluI	GCNGC	6 cut(s)	1089, 1099, 1497, 1764, 1929, 2192
GsaI	CCCAGC	3 cut(s)	314, 813, 2255
HaeII	RGCGCY	1 cut(s)	318
HaeIII	GGCC	6 cut(s)	435, 542, 1040, 1288, 1306, 1922
HapII	CCGG	2 cut(s)	539, 1083
HgaI	GACGC	3 cut(s)	273, 848, 1201
HhaI	GCGC	3 cut(s)	317, 1460, 1648
Hin6I	GCGC	3 cut(s)	315, 1458, 1646
HinP1I	GCGC	3 cut(s)	315, 1458, 1646
HinfI	GANTC	6 cut(s)	468, 480, 1299, 1442, 2048, 2123
HpaII	CCGG	2 cut(s)	539, 1083
HphI	GGTGA	3 cut(s)	1302, 1402, 2314
Hpy166II	GTNNAC	4 cut(s)	1322, 1559, 1809, 1969
Hpy188I	TCNGA	9 cut(s)	276, 440, 571, 838, 949, 1133, 1600, 2230, 2284
Hpy188III	TCNNGA	6 cut(s)	988, 1179, 1621, 1724, 2120, 2374
Hpy8I	GTNNAC	4 cut(s)	1322, 1559, 1809, 1969
Hpy99I	CGWCG	2 cut(s)	289, 842
HpyAV	CCTTC	4 cut(s)	237, 761, 1522, 2181
HpyCH4III	ACNGT	7 cut(s)	418, 637, 1002, 1813, 1966, 1984, 2204
HpyCH4IV	ACGT	2 cut(s)	1755, 1933
HpyF10VI	GCNNNNNNNGC	5 cut(s)	107, 116, 806, 1455, 1928
HpySE526I	ACGT	2 cut(s)	1755, 1933
HspAI	GCGC	3 cut(s)	315, 1458, 1646
Ksp22I	TGATCA	1 cut(s)	363
Kzo9I	GATC	6 cut(s)	363, 1204, 1623, 1641, 2170, 2351
LmnI	GCTCC	3 cut(s)	674, 1203, 2248
Lsp1109I	GCAGC	4 cut(s)	1075, 1085, 1483, 1940
LweI	GCATC	3 cut(s)	1061, 1566, 2131
MabI	ACCWGGT	2 cut(s)	246, 1734
MaeII	ACGT	2 cut(s)	1755, 1933
MaeIII	GTNAC	6 cut(s)	139, 242, 922, 1078, 1756, 2006
MalI	GATC	6 cut(s)	365, 1206, 1625, 1643, 2172, 2353
MboI	GATC	6 cut(s)	363, 1204, 1623, 1641, 2170, 2351
MfeI	CAATTG	1 cut(s)	747
MhlI	GDGCHC	1 cut(s)	817
MluI	ACGCGT	1 cut(s)	1210
MlyI	GAGTC	3 cut(s)	1293, 2057, 2117
MmeI	TCCRAC	3 cut(s)	861, 1795, 2164
Mph1103I	ATGCAT	2 cut(s)	103, 1665
MroXI	GAANNNNTTC	2 cut(s)	954, 1555
MseI	TTAA	6 cut(s)	78, 270, 1295, 1997, 2067, 2210
MslI	CAYNNNNRTG	2 cut(s)	359, 1754
MspI	CCGG	2 cut(s)	539, 1083
MspR9I	CCNGG	6 cut(s)	206, 248, 402, 1084, 1736, 1842
MunI	CAATTG	1 cut(s)	747
Mva1269I	GAATGC	1 cut(s)	379
MvaI	CCWGG	5 cut(s)	206, 248, 402, 1736, 1842
MvnI	CGCG	3 cut(s)	1212, 1646, 1911
MwoI	GCNNNNNNNGC	5 cut(s)	107, 116, 806, 1455, 1928
NciI	CCSGG	1 cut(s)	1084
NdeI	CATATG	2 cut(s)	1057, 1572
NdeII	GATC	6 cut(s)	363, 1204, 1623, 1641, 2170, 2351
NheI	GCTAGC	1 cut(s)	448
NlaIV	GGNNCC	2 cut(s)	225, 1750
NmeAIII	GCCGAG	2 cut(s)	127, 575
NmuCI	GTSAC	2 cut(s)	139, 1756
NsiI	ATGCAT	2 cut(s)	103, 1665
NspI	RCATGY	3 cut(s)	284, 2198, 2272
OliI	CACNNNNGTG	1 cut(s)	1754
PaeI	GCATGC	1 cut(s)	2198
PagI	TCATGA	1 cut(s)	1723
PceI	AGGCCT	2 cut(s)	435, 1288
PctI	GAATGC	1 cut(s)	379
PdmI	GAANNNNTTC	2 cut(s)	954, 1555
PfeI	GAWTC	3 cut(s)	468, 480, 1442
PflFI	GACNNNGTC	1 cut(s)	1855
PflMI	CCANNNNNTGG	2 cut(s)	1741, 1954
PkrI	GCNGC	6 cut(s)	1090, 1100, 1498, 1765, 1930, 2193
PleI	GAGTC	3 cut(s)	1293, 2056, 2117
PpsI	GAGTC	3 cut(s)	1293, 2056, 2117
Ppu21I	YACGTR	1 cut(s)	1934
PpuMI	RGGWCCY	2 cut(s)	224, 550
PsiI	TTATAA	1 cut(s)	254
Psp5II	RGGWCCY	2 cut(s)	224, 550
Psp6I	CCWGG	5 cut(s)	204, 246, 400, 1734, 1840
PspFI	CCCAGC	3 cut(s)	310, 809, 2251
PspGI	CCWGG	5 cut(s)	204, 246, 400, 1734, 1840
PspN4I	GGNNCC	2 cut(s)	225, 1750
PspPI	GGNCC	9 cut(s)	224, 550, 866, 899, 1304, 1319, 1613, 1898, 1957
PspPPI	RGGWCCY	2 cut(s)	224, 550
PstI	CTGCAG	2 cut(s)	343, 2294
PsyI	GACNNNGTC	1 cut(s)	1855
RsaI	GTAC	6 cut(s)	639, 1272, 1506, 1701, 1810, 2130
RsaNI	GTAC	6 cut(s)	638, 1271, 1505, 1700, 1809, 2129
RseI	CAYNNNNRTG	2 cut(s)	359, 1754
SaqAI	TTAA	6 cut(s)	78, 270, 1295, 1997, 2067, 2210
SatI	GCNGC	6 cut(s)	1089, 1099, 1497, 1764, 1929, 2192
Sau3AI	GATC	6 cut(s)	363, 1204, 1623, 1641, 2170, 2351
Sau96I	GGNCC	9 cut(s)	224, 550, 866, 899, 1304, 1319, 1613, 1898, 1957
SchI	GAGTC	3 cut(s)	1293, 2057, 2117
ScrFI	CCNGG	6 cut(s)	206, 248, 402, 1084, 1736, 1842
SduI	GDGCHC	1 cut(s)	817
SexAI	ACCWGGT	2 cut(s)	246, 1734
SfaNI	GCATC	3 cut(s)	1061, 1566, 2131
SfcI	CTRYAG	2 cut(s)	339, 2290
SinI	GGWCC	8 cut(s)	224, 550, 866, 899, 1319, 1613, 1898, 1957
SmiMI	CAYNNNNRTG	2 cut(s)	359, 1754
SmlI	CTYRAG	2 cut(s)	167, 1606
SmoI	CTYRAG	2 cut(s)	167, 1606
SpeI	ACTAGT	2 cut(s)	1507, 1822
SphI	GCATGC	1 cut(s)	2198
SseBI	AGGCCT	2 cut(s)	435, 1288
SspI	AATATT	2 cut(s)	1140, 1799
StuI	AGGCCT	2 cut(s)	435, 1288
StyD4I	CCNGG	6 cut(s)	204, 246, 400, 1082, 1734, 1840
TaaI	ACNGT	7 cut(s)	418, 637, 1002, 1813, 1966, 1984, 2204
TaiI	ACGT	2 cut(s)	1758, 1936
TaqI	TCGA	8 cut(s)	31, 1004, 1180, 1365, 1479, 2051, 2112, 2375
TatI	WGTACW	4 cut(s)	637, 1504, 1808, 2128
TauI	GCSGC	2 cut(s)	1766, 2194
TfiI	GAWTC	3 cut(s)	468, 480, 1442
Tru1I	TTAA	6 cut(s)	78, 270, 1295, 1997, 2067, 2210
Tru9I	TTAA	6 cut(s)	78, 270, 1295, 1997, 2067, 2210
TscAI	CASTG	2 cut(s)	702, 2299
TseFI	GTSAC	2 cut(s)	139, 1756
TseI	GCWGC	4 cut(s)	1088, 1098, 1496, 1928
Tsp45I	GTSAC	2 cut(s)	139, 1756
TspGWI	ACGGA	2 cut(s)	687, 1139
TspRI	CASTG	2 cut(s)	702, 2299
Tth111I	GACNNNGTC	1 cut(s)	1855
Van91I	CCANNNNNTGG	2 cut(s)	1741, 1954
VpaK11BI	GGWCC	8 cut(s)	224, 550, 866, 899, 1319, 1613, 1898, 1957
XapI	RAATTY	6 cut(s)	188, 347, 565, 785, 2231, 2380
XceI	RCATGY	3 cut(s)	284, 2198, 2272
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1742
XmiI	GTMKAC	1 cut(s)	1968
XmnI	GAANNNNTTC	2 cut(s)	954, 1555
Zsp2I	ATGCAT	2 cut(s)	103, 1665

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.