Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0001152

Physical Location & Seq

Genomic Coordinates Reverse (-)

7472310 .. 7482169

Gene Structure 9860 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026983

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGAGCTCTTGCATTATTGTTGAAATAACAGAACTTGAGAACATTGATGGAAACCTCAAAAGTAGGTTGTCGGAGTGCTTGTTTTGTGAAGGTGCTAAGGATCCTGAAGCCACTGTTGATGTCGTATTGGGTGGCGTTGTCTTAGGGCCGTCTGTGATAGGACAGAACAAGGTATTCAGGAACCAAGTATACGGACTAAATGAACAAATTCTATTGTTCCACGCAATAGCTGTGATTGGCGCTATATACTCCATATTCCTAATGACAGTAAAATTTGATCCAGTCTTGATCAAGAGGACAGCAAAAAACTCATGGAAGATTGGCGCGTCATTCCTTTTTCCTTCTCTCATCCTGGTTTACCCTCTATCCAGAGGTCATGGTGGCTTCAATACACATAACTTCATGTTACTATTGGCCAGTACGTGTGCCCTATCTATGAGTTTTTTTCCAGTCATAGCTGAGGCCTTGTATGAACTTGATCTTATGACTTCAGAGTTGGGCCAACTAGCCCTATCCTCTGCAATGCTTAATGCTGCCGCACTATGGTTCTTCGTTATAGTTAATATGATTGCTTTTAGCAATGGAATTCCGAATTCCGGCATCCCTTTCCACGTTGGGGTTGCTACTCTTCACATTCTACATCTTACACCCACTTATGCTGGCCTAGGCCAAAGGTATAGTTTCGCTCCTTTTATTCTAGGTTTAATCATACCAAATGGACCATCACTTGGTGCAACATTAACGGCCAAGACCGAACTCCTGGTCTCGGAAGTTCTTCTACCAGTGTTCTTTTTTCTTCTTGGCAGCAGCGTAAATATTATTATTCTTGCGTTATTTGTTACAAAGATAGTGGGAGTTACAATGACTGGTTTGTGCTGCAAAATTAGCTTGAAGAATAGCTTCGTACTCAGCATGATCATGAGTATAGTAGAGGTTATGATCTACAATTCACATATCAGAAACATCCAATCACTGCCAAATAACTCGGGAACGTTTCATATTGTTTGTTGTGTCCACAATGAAGAAAGTGCCGGCAGCATCATCACCTTCCTGGAAGCAAGCCGCATTTGCACATACATTGTCCATGCAGTTGATTTAATTGGGAGTTCTACTCCACAATTGATGCCTTACGAGAAGAAAAGGAAACTTAGGCGAATTACTCAGCCTTATACTATGGTGGCTCTTTATAAATCCACGCACGAGACCATATTTCGTCTAGCTCAGGACAAGCTTGCACCTCTGATTATCATCCCATTCCCTGATAACCACCACCATTCTATTTTAACAATTGTGGCTATATTTTTCATTGGTGGACCAGATGACCGTGAGGCATTAGCATATGCATCACGCATGGCTGACAACCTTGATGTGGGCATCACGGTGTTCAGGATTCTCGTGCGGATCAATAAAATAGAAAGTTTTGAGGAAGAGGAGAGAGAGTTTAAGCTAGACGAGTCATTGTTGGATGAGTTTAAGCTAAGGAACACAGGGAATAATCGGTTGAATTGGCGTGATATTGAGGTGGATGATGGTGTTGAGGCTGTGAAGGCTATTAAGAATTTTCAGGGTGAGTACGACCTAGTTATGGTGGGGCGACGACATTGGGATGTGTCGTTGAGGGATGAAAAAATGGCAGACTTATTGCACAATCCAGAGCTGGGAGTGATCAGTGATGTGCTCGCTTCTTCAGATTTCTGTGGTGGAATGGTGAATGTGTTGGTGATGCAAGAAAGTAGGACCTTGAGTTGTGGAGAGTTTTGTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

589

Amino Acids

65.08

Weight (kDa)

5.76

Isoelectric Point (pI)

40.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CHX17_C	PF23259	431 - 577	3.2e-10	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001152)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43690 FvH4_7g25211 FvH4_7g25250 FvH4_7g25290 FvH4_7g25310
malus_domestica	MD01G1158700.v1.1 MD01G1158800.v1.1 MD07G1227200.v1.1 MD07G1227600.v1.1
prunus_persica	Prupe.2G257000_v2.0.a1 Prupe.2G257100_v2.0.a1
pyrus_communis	pycom01g17540
rosa_chinensis	RchiOBHm_Chr1g0371191 RchiOBHm_Chr1g0371201 RchiOBHm_Chr1g0371211
rosa_laevigata	RLG00000026978 RLG00000026979 RLG00000026980 RLG00000026981 RLG00000026983 RLG00000036771
rosa_multiflora	Rmu_co8222838.1_g000001 Rmu_sc0000631.1_g000023 Rmu_sc0001018.1_g000042 Rmu_sc0001018.1_g000044 Rmu_sc0001018.1_g000049 Rmu_sc0001018.1_g000050 Rmu_sc0001018.1_g000051 Rmu_sc0008081.1_g000003
rosa_roxburghii	Rroxscaffold_4G00285900 Rroxscaffold_4G00285910
rosa_rugosa	Rorug01G0361700 Rorug01G0361900 Rorug01G0362000 Rorug01G0362200 Rorug05G0460600
rosa_samantha	Rh1AG372000 Rh1AG372200 Rh1AG372300 Rh1BG335100 Rh1BG335500 Rh1BG335700 Rh1BG335800 Rh1CG348600 Rh1CG349000 Rh1CG349100 Rh1CG349200 Rh1DG366500 Rh1DG366900 Rh1DG367000 Rh5BG537300 Rh5CG560800 Rh5DG548900
rosa_wichuraiana	Rw1G032720 Rw1G032730 Rw1G032740 Rw5G047750 Rw5G047880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1188
AccB7I	CCANNNNNTGG	1 cut(s)	728
AccI	GTMKAC	1 cut(s)	189
AccII	CGCG	1 cut(s)	326
AciI	CCGC	3 cut(s)	537, 1063, 1399
AclI	AACGTT	1 cut(s)	992
AclWI	GGATC	4 cut(s)	95, 108, 272, 1409
AcoI	YGGCCR	2 cut(s)	414, 744
AcsI	RAATTY	5 cut(s)	207, 272, 585, 592, 1558
AcuI	CTGAAG	3 cut(s)	126, 474, 1671
AdeI	CACNNNGTG	1 cut(s)	731
AfaI	GTAC	3 cut(s)	421, 906, 1574
AfiI	CCNNNNNNNGG	8 cut(s)	543, 596, 616, 728, 766, 1369, 1585, 1658
AflIII	ACRYGT	1 cut(s)	422
AgsI	TTSAA	4 cut(s)	23, 388, 892, 1504
AjnI	CCWGG	3 cut(s)	351, 759, 1050
Alw21I	GWGCWC	2 cut(s)	8, 1680
Alw26I	GTCTC	2 cut(s)	769, 1196
AlwI	GGATC	4 cut(s)	95, 108, 272, 1409
Ama87I	CYCGRG	1 cut(s)	985
AoxI	GGCC	7 cut(s)	146, 414, 462, 499, 661, 667, 744
ApeKI	GCWGC	5 cut(s)	533, 804, 807, 876, 1035
ApoI	RAATTY	5 cut(s)	207, 272, 585, 592, 1558
ArsI	GACNNNNNNTTYG	2 cut(s)	747, 779
Asp700I	GAANNNNTTC	3 cut(s)	207, 774, 899
AspA2I	CCTAGG	1 cut(s)	664
AspLEI	GCGC	2 cut(s)	242, 326
AspS9I	GGNCC	5 cut(s)	146, 499, 719, 1313, 1737
AsuHPI	GGTGA	4 cut(s)	1036, 1580, 1720, 1732
AvaI	CYCGRG	1 cut(s)	985
AvaII	GGWCC	3 cut(s)	719, 1313, 1737
AvrII	CCTAGG	1 cut(s)	664
BaeGI	GKGCMC	1 cut(s)	430
BalI	TGGCCA	1 cut(s)	416
BamHI	GGATCC	1 cut(s)	100
BanII	GRGCYC	1 cut(s)	8
BarI	GAAGNNNNNNTAC	2 cut(s)	762, 794
BauI	CACGAG	2 cut(s)	1199, 1394
Bbv12I	GWGCWC	2 cut(s)	8, 1680
BbvCI	CCTCAGC	1 cut(s)	459
BbvI	GCAGC	5 cut(s)	520, 816, 819, 863, 1047
BccI	CCATC	3 cut(s)	41, 730, 1523
BceAI	ACGGC	2 cut(s)	133, 759
BciT130I	CCWGG	3 cut(s)	353, 761, 1052
BclI	TGATCA	3 cut(s)	288, 915, 1665
BcoDI	GTCTC	2 cut(s)	769, 1196
BfaI	CTAG	6 cut(s)	506, 665, 698, 1217, 1448, 1580
BfoI	RGCGCY	1 cut(s)	243
BisI	GCNGC	7 cut(s)	534, 537, 805, 808, 877, 1036, 1063
BlnI	CCTAGG	1 cut(s)	664
BlsI	GCNGC	7 cut(s)	535, 538, 806, 809, 878, 1037, 1064
Bme1390I	CCNGG	3 cut(s)	353, 761, 1052
Bme18I	GGWCC	3 cut(s)	719, 1313, 1737
BmeT110I	CYCGRG	1 cut(s)	985
BmgT120I	GGNCC	5 cut(s)	146, 499, 719, 1313, 1737
BmiI	GGNNCC	2 cut(s)	102, 182
BmrFI	CCNGG	3 cut(s)	353, 761, 1052
BmsI	GCATC	6 cut(s)	609, 1047, 1113, 1352, 1383, 1713
BplI	GAGNNNNNCTC	2 cut(s)	1096, 1128
Bpu10I	CCTNAGC	4 cut(s)	96, 459, 1221, 1478
BpuEI	CTTGAG	2 cut(s)	56, 1762
BsaAI	YACGTR	1 cut(s)	423
BsaBI	GATNNNNATC	1 cut(s)	1247
BsaI	GGTCTC	2 cut(s)	769, 1196
BsaJI	CCNNGG	1 cut(s)	664
BsaXI	ACNNNNNCTCC	4 cut(s)	65, 95, 1424, 1454
Bsc4I	CCNNNNNNNGG	8 cut(s)	543, 596, 616, 728, 766, 1369, 1585, 1658
Bse118I	RCCGGY	1 cut(s)	1031
Bse1I	ACTGG	5 cut(s)	281, 417, 449, 782, 871
Bse3DI	GCAATG	2 cut(s)	528, 586
Bse8I	GATNNNNATC	1 cut(s)	1247
BseBI	CCWGG	3 cut(s)	353, 761, 1052
BseDI	CCNNGG	1 cut(s)	664
BseGI	GGATG	8 cut(s)	348, 600, 963, 1248, 1471, 1531, 1612, 1627
BseJI	GATNNNNATC	1 cut(s)	1247
BseLI	CCNNNNNNNGG	8 cut(s)	543, 596, 616, 728, 766, 1369, 1585, 1658
BseMI	GCAATG	2 cut(s)	528, 586
BseMII	CTCAG	4 cut(s)	450, 922, 1175, 1235
BseNI	ACTGG	5 cut(s)	281, 417, 449, 782, 871
BseRI	GAGGAG	1 cut(s)	1445
BseSI	GKGCMC	1 cut(s)	430
BseXI	GCAGC	5 cut(s)	520, 816, 819, 863, 1047
BseYI	CCCAGC	1 cut(s)	1657
Bsh1236I	CGCG	1 cut(s)	326
BshFI	GGCC	7 cut(s)	148, 416, 464, 501, 663, 669, 746
BsiHKAI	GWGCWC	2 cut(s)	8, 1680
BsiHKCI	CYCGRG	1 cut(s)	985
BsiSI	CCGG	2 cut(s)	597, 1032
BslI	CCNNNNNNNGG	8 cut(s)	543, 596, 616, 728, 766, 1369, 1585, 1658
BsmAI	GTCTC	2 cut(s)	769, 1196
BsnI	GGCC	7 cut(s)	148, 416, 464, 501, 663, 669, 746
Bso31I	GGTCTC	2 cut(s)	769, 1196
BsoBI	CYCGRG	1 cut(s)	985
Bsp1286I	GDGCHC	3 cut(s)	8, 430, 1680
Bsp143I	GATC	8 cut(s)	100, 277, 288, 478, 915, 939, 1401, 1665
BspACI	CCGC	3 cut(s)	537, 1063, 1399
BspANI	GGCC	7 cut(s)	148, 416, 464, 501, 663, 669, 746
BspCNI	CTCAG	4 cut(s)	451, 921, 1174, 1234
BspFNI	CGCG	1 cut(s)	326
BspHI	TCATGA	1 cut(s)	918
BspLI	GGNNCC	2 cut(s)	102, 182
BspPI	GGATC	4 cut(s)	95, 108, 272, 1409
BspTNI	GGTCTC	2 cut(s)	769, 1196
BsrDI	GCAATG	2 cut(s)	528, 586
BsrFI	RCCGGY	1 cut(s)	1031
BsrI	ACTGG	5 cut(s)	281, 417, 449, 782, 871
BssAI	RCCGGY	1 cut(s)	1031
BssECI	CCNNGG	1 cut(s)	664
BssMI	GATC	8 cut(s)	100, 277, 288, 478, 915, 939, 1401, 1665
BssNAI	GTATAC	1 cut(s)	190
BssSI	CACGAG	2 cut(s)	1199, 1394
BssT1I	CCWWGG	1 cut(s)	664
Bst1107I	GTATAC	1 cut(s)	190
Bst2BI	CACGAG	2 cut(s)	1199, 1394
Bst2UI	CCWGG	3 cut(s)	353, 761, 1052
Bst4CI	ACNGT	4 cut(s)	115, 268, 1325, 1381
Bst6I	CTCTTC	2 cut(s)	633, 1422
BstBAI	YACGTR	1 cut(s)	423
BstC8I	GCNNGC	5 cut(s)	661, 1033, 1060, 1233, 1680
BstDEI	CTNAG	8 cut(s)	96, 142, 459, 908, 1148, 1161, 1221, 1478
BstF5I	GGATG	8 cut(s)	348, 600, 963, 1248, 1471, 1531, 1612, 1627
BstFNI	CGCG	1 cut(s)	326
BstH2I	RGCGCY	1 cut(s)	243
BstHHI	GCGC	2 cut(s)	242, 326
BstKTI	GATC	8 cut(s)	103, 280, 291, 481, 918, 942, 1404, 1668
BstMAI	GTCTC	2 cut(s)	769, 1196
BstMBI	GATC	8 cut(s)	100, 277, 288, 478, 915, 939, 1401, 1665
BstMWI	GCNNNNNNNGC	3 cut(s)	885, 1068, 1547
BstNI	CCWGG	3 cut(s)	353, 761, 1052
BstSCI	CCNGG	3 cut(s)	351, 759, 1050
BstSLI	GKGCMC	1 cut(s)	430
BstUI	CGCG	1 cut(s)	326
BstV1I	GCAGC	5 cut(s)	520, 816, 819, 863, 1047
BstX2I	RGATCY	1 cut(s)	100
BstYI	RGATCY	1 cut(s)	100
BstZ17I	GTATAC	1 cut(s)	190
BsuRI	GGCC	7 cut(s)	148, 416, 464, 501, 663, 669, 746
BtsCI	GGATG	8 cut(s)	348, 600, 963, 1248, 1471, 1531, 1612, 1627
BtsI	GCAGTG	1 cut(s)	971
BtsIMutI	CAGTG	4 cut(s)	111, 789, 971, 1675
Cac8I	GCNNGC	5 cut(s)	661, 1033, 1060, 1233, 1680
CciI	TCATGA	1 cut(s)	918
CfoI	GCGC	2 cut(s)	242, 326
Cfr10I	RCCGGY	1 cut(s)	1031
Cfr13I	GGNCC	5 cut(s)	146, 499, 719, 1313, 1737
CseI	GACGC	1 cut(s)	315
Csp6I	GTAC	3 cut(s)	420, 905, 1573
CspCI	CAANNNNNGTGG	2 cut(s)	831, 866
CviAII	CATG	7 cut(s)	312, 377, 403, 913, 919, 1085, 1351
CviQI	GTAC	3 cut(s)	420, 905, 1573
DdeI	CTNAG	8 cut(s)	96, 142, 459, 908, 1148, 1161, 1221, 1478
DpnI	GATC	8 cut(s)	102, 279, 290, 480, 917, 941, 1403, 1667
DpnII	GATC	8 cut(s)	100, 277, 288, 478, 915, 939, 1401, 1665
DraIII	CACNNNGTG	1 cut(s)	731
EaeI	YGGCCR	2 cut(s)	414, 744
Eam1104I	CTCTTC	2 cut(s)	633, 1422
EarI	CTCTTC	2 cut(s)	633, 1422
Ecl136II	GAGCTC	1 cut(s)	6
Eco130I	CCWWGG	1 cut(s)	664
Eco147I	AGGCCT	1 cut(s)	464
Eco24I	GRGCYC	1 cut(s)	8
Eco31I	GGTCTC	2 cut(s)	769, 1196
Eco47I	GGWCC	3 cut(s)	719, 1313, 1737
Eco53kI	GAGCTC	1 cut(s)	6
Eco57I	CTGAAG	3 cut(s)	126, 474, 1671
Eco88I	CYCGRG	1 cut(s)	985
EcoICRI	GAGCTC	1 cut(s)	6
EcoO109I	RGGNCCY	1 cut(s)	1737
EcoRI	GAATTC	2 cut(s)	585, 592
EcoRII	CCWGG	3 cut(s)	351, 759, 1050
EcoT14I	CCWWGG	1 cut(s)	664
EcoT22I	ATGCAT	1 cut(s)	1345
EcoT38I	GRGCYC	1 cut(s)	8
ErhI	CCWWGG	1 cut(s)	664
FaeI	CATG	7 cut(s)	315, 380, 406, 916, 922, 1088, 1354
FalI	AAGNNNNNCTT	2 cut(s)	884, 916
FatI	CATG	7 cut(s)	311, 376, 402, 912, 918, 1084, 1350
FauNDI	CATATG	1 cut(s)	1339
FbaI	TGATCA	3 cut(s)	288, 915, 1665
FblI	GTMKAC	1 cut(s)	189
Fnu4HI	GCNGC	7 cut(s)	534, 537, 805, 808, 877, 1036, 1063
FokI	GGATG	8 cut(s)	335, 587, 950, 1235, 1478, 1538, 1619, 1634
FriOI	GRGCYC	1 cut(s)	8
Fsp4HI	GCNGC	7 cut(s)	534, 537, 805, 808, 877, 1036, 1063
FspBI	CTAG	6 cut(s)	506, 665, 698, 1217, 1448, 1580
GlaI	GCGC	2 cut(s)	241, 325
GluI	GCNGC	7 cut(s)	534, 537, 805, 808, 877, 1036, 1063
GsaI	CCCAGC	1 cut(s)	1661
HaeII	RGCGCY	1 cut(s)	243
HaeIII	GGCC	7 cut(s)	148, 416, 464, 501, 663, 669, 746
HapII	CCGG	2 cut(s)	597, 1032
HgaI	GACGC	1 cut(s)	315
HhaI	GCGC	2 cut(s)	242, 326
Hin1II	CATG	7 cut(s)	315, 380, 406, 916, 922, 1088, 1354
Hin6I	GCGC	2 cut(s)	240, 324
HinP1I	GCGC	2 cut(s)	240, 324
HindIII	AAGCTT	1 cut(s)	1229
HinfI	GANTC	2 cut(s)	1390, 1454
HpaII	CCGG	2 cut(s)	597, 1032
HphI	GGTGA	4 cut(s)	1036, 1580, 1720, 1732
Hpy166II	GTNNAC	4 cut(s)	190, 358, 1015, 1313
Hpy188I	TCNGA	7 cut(s)	73, 493, 591, 769, 959, 1242, 1690
Hpy8I	GTNNAC	4 cut(s)	190, 358, 1015, 1313
Hpy99I	CGWCG	1 cut(s)	1599
HpyAV	CCTTC	4 cut(s)	83, 351, 1057, 1540
HpyCH4III	ACNGT	4 cut(s)	115, 268, 1325, 1381
HpyCH4IV	ACGT	3 cut(s)	422, 612, 992
HpyF10VI	GCNNNNNNNGC	3 cut(s)	885, 1068, 1547
HpyF3I	CTNAG	8 cut(s)	96, 142, 459, 908, 1148, 1161, 1221, 1478
HpySE526I	ACGT	3 cut(s)	422, 612, 992
Hsp92II	CATG	7 cut(s)	315, 380, 406, 916, 922, 1088, 1354
HspAI	GCGC	2 cut(s)	240, 324
KroI	GCCGGC	1 cut(s)	1031
KroNI	GCCGGC	1 cut(s)	1033
Ksp22I	TGATCA	3 cut(s)	288, 915, 1665
Kzo9I	GATC	8 cut(s)	100, 277, 288, 478, 915, 939, 1401, 1665
LmnI	GCTCC	1 cut(s)	691
Lsp1109I	GCAGC	5 cut(s)	520, 816, 819, 863, 1047
LweI	GCATC	6 cut(s)	609, 1047, 1113, 1352, 1383, 1713
MaeI	CTAG	6 cut(s)	506, 665, 698, 1217, 1448, 1580
MaeII	ACGT	3 cut(s)	422, 612, 992
MaeIII	GTNAC	4 cut(s)	405, 838, 856, 1760
MalI	GATC	8 cut(s)	102, 279, 290, 480, 917, 941, 1403, 1667
MboI	GATC	8 cut(s)	100, 277, 288, 478, 915, 939, 1401, 1665
MfeI	CAATTG	2 cut(s)	1118, 1287
MflI	RGATCY	1 cut(s)	100
MhlI	GDGCHC	3 cut(s)	8, 430, 1680
MlsI	TGGCCA	1 cut(s)	416
MluNI	TGGCCA	1 cut(s)	416
MlyI	GAGTC	1 cut(s)	1463
MmeI	TCCRAC	2 cut(s)	51, 1443
Mox20I	TGGCCA	1 cut(s)	416
Mph1103I	ATGCAT	1 cut(s)	1345
MroNI	GCCGGC	1 cut(s)	1031
MroXI	GAANNNNTTC	3 cut(s)	207, 774, 899
MscI	TGGCCA	1 cut(s)	416
MseI	TTAA	9 cut(s)	528, 561, 704, 740, 1097, 1283, 1443, 1473, 1554
MslI	CAYNNNNRTG	3 cut(s)	917, 1379, 1605
Msp20I	TGGCCA	1 cut(s)	416
MspI	CCGG	2 cut(s)	597, 1032
MspR9I	CCNGG	3 cut(s)	353, 761, 1052
MunI	CAATTG	2 cut(s)	1118, 1287
MvaI	CCWGG	3 cut(s)	353, 761, 1052
MvnI	CGCG	1 cut(s)	326
MwoI	GCNNNNNNNGC	3 cut(s)	885, 1068, 1547
NaeI	GCCGGC	1 cut(s)	1033
NdeI	CATATG	1 cut(s)	1339
NdeII	GATC	8 cut(s)	100, 277, 288, 478, 915, 939, 1401, 1665
NgoMIV	GCCGGC	1 cut(s)	1031
NlaIII	CATG	7 cut(s)	315, 380, 406, 916, 922, 1088, 1354
NlaIV	GGNNCC	2 cut(s)	102, 182
NsiI	ATGCAT	1 cut(s)	1345
PagI	TCATGA	1 cut(s)	918
PceI	AGGCCT	1 cut(s)	464
PdiI	GCCGGC	1 cut(s)	1033
PdmI	GAANNNNTTC	3 cut(s)	207, 774, 899
PfeI	GAWTC	1 cut(s)	1390
PflMI	CCANNNNNTGG	1 cut(s)	728
PfoI	TCCNGGA	1 cut(s)	1050
PkrI	GCNGC	7 cut(s)	535, 538, 806, 809, 878, 1037, 1064
PleI	GAGTC	1 cut(s)	1462
PpsI	GAGTC	1 cut(s)	1462
Ppu21I	YACGTR	1 cut(s)	423
PpuMI	RGGWCCY	1 cut(s)	1737
PsiI	TTATAA	1 cut(s)	1188
Psp124BI	GAGCTC	1 cut(s)	8
Psp1406I	AACGTT	1 cut(s)	992
Psp5II	RGGWCCY	1 cut(s)	1737
Psp6I	CCWGG	3 cut(s)	351, 759, 1050
PspFI	CCCAGC	1 cut(s)	1657
PspGI	CCWGG	3 cut(s)	351, 759, 1050
PspN4I	GGNNCC	2 cut(s)	102, 182
PspPI	GGNCC	5 cut(s)	146, 499, 719, 1313, 1737
PspPPI	RGGWCCY	1 cut(s)	1737
PsrI	GAACNNNNNNTAC	2 cut(s)	173, 205
PsuI	RGATCY	1 cut(s)	100
RsaI	GTAC	3 cut(s)	421, 906, 1574
RsaNI	GTAC	3 cut(s)	420, 905, 1573
RseI	CAYNNNNRTG	3 cut(s)	917, 1379, 1605
SacI	GAGCTC	1 cut(s)	8
SaqAI	TTAA	9 cut(s)	528, 561, 704, 740, 1097, 1283, 1443, 1473, 1554
SatI	GCNGC	7 cut(s)	534, 537, 805, 808, 877, 1036, 1063
Sau3AI	GATC	8 cut(s)	100, 277, 288, 478, 915, 939, 1401, 1665
Sau96I	GGNCC	5 cut(s)	146, 499, 719, 1313, 1737
SchI	GAGTC	1 cut(s)	1463
ScrFI	CCNGG	3 cut(s)	353, 761, 1052
SduI	GDGCHC	3 cut(s)	8, 430, 1680
SfaNI	GCATC	6 cut(s)	609, 1047, 1113, 1352, 1383, 1713
SinI	GGWCC	3 cut(s)	719, 1313, 1737
SmiMI	CAYNNNNRTG	3 cut(s)	917, 1379, 1605
SmlI	CTYRAG	2 cut(s)	35, 1741
SmoI	CTYRAG	2 cut(s)	35, 1741
SseBI	AGGCCT	1 cut(s)	464
SsiI	CCGC	3 cut(s)	537, 1063, 1399
SspI	AATATT	1 cut(s)	817
SspMI	CTAG	6 cut(s)	506, 665, 698, 1217, 1448, 1580
SstI	GAGCTC	1 cut(s)	8
StuI	AGGCCT	1 cut(s)	464
StyD4I	CCNGG	3 cut(s)	351, 759, 1050
StyI	CCWWGG	1 cut(s)	664
TaaI	ACNGT	4 cut(s)	115, 268, 1325, 1381
TaiI	ACGT	3 cut(s)	425, 615, 995
TaqII	GACCGA	1 cut(s)	767
TauI	GCSGC	2 cut(s)	539, 1065
TfiI	GAWTC	1 cut(s)	1390
Tru1I	TTAA	9 cut(s)	528, 561, 704, 740, 1097, 1283, 1443, 1473, 1554
Tru9I	TTAA	9 cut(s)	528, 561, 704, 740, 1097, 1283, 1443, 1473, 1554
TscAI	CASTG	4 cut(s)	118, 789, 978, 1675
TseI	GCWGC	5 cut(s)	533, 804, 807, 876, 1035
TspDTI	ATGAA	7 cut(s)	216, 391, 486, 986, 1035, 1294, 1638
TspGWI	ACGGA	1 cut(s)	207
TspRI	CASTG	4 cut(s)	118, 789, 978, 1675
Van91I	CCANNNNNTGG	1 cut(s)	728
VpaK11BI	GGWCC	3 cut(s)	719, 1313, 1737
XapI	RAATTY	5 cut(s)	207, 272, 585, 592, 1558
XmaJI	CCTAGG	1 cut(s)	664
XmiI	GTMKAC	1 cut(s)	189
XmnI	GAANNNNTTC	3 cut(s)	207, 774, 899
XspI	CTAG	6 cut(s)	506, 665, 698, 1217, 1448, 1580
Zsp2I	ATGCAT	1 cut(s)	1345

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.