Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001018.1

Orthogroup ID

OG0001152

Physical Location & Seq

Genomic Coordinates Forward (+)

192210 .. 194369

Gene Structure 2160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001018.1_g000042.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

atgggtctgctgggcgctacatattccatgttcataactgcagtaaaatttgacataagcatgatcaaagggtcaaagcattctttgaagattggtgttccagggttctttattaccgttgcgatatccttaggcctcggatacccgctagccacctacattgctggaatcaaagggggattcttccccatatttttattttctattatttctttcactttcttccctgatatagttccggccttagaggacctcaaccttatgaattctgagttgggtcaaatcgccatgtcctcggctttgcattttgaaatgatacaatggttgttctcaacagtacaagacatagctactaaagataaagcaatccacggagctttgacattcatttccgcagtggcattgcttgttttcattgtttatgtcatacgcccgcttatggtatcaattgctaagaacacacccgaaggacaacaagtaaaggaattttatgtagtagcaatactagctggggctctagtcctgtcatttatatccgacgcaataggttgcacctttgttcttggtcctgtaattcttgggtttgtcataccagatggaccacctctgggtgcaacattagtaaccaagactgaattgttagtctctgaacttcttcttcccgtgttcttttttcgtattggcttcaggataaacatacagtcgattagcgattggaagagttttaccacattgcaggccatcatcggtgcatcatatgtggcaaagatggtggcagttaccggggctgcattgtgctgcaaaattagtttgagaaatagtctcttgctcggcataatattgaatatccgtggtattatagatttgacctttttctctcgatggaggtatagtcagctcctaaatgaacacgtttatactcaactagtgttatctgtgctcattgggaacatgattgcaacatcattggtacatttcacatataggcctcatttaagactcgggccatcacccaaaggtccacgcattagaaacattcaatcagttcaaagcaactctcctttcgacattctttgttgtatccacagcgaggaaagtatccgcaacctcacctccctcctagaagcctcaagcccaacagaagcaagccccatttgcgcttacattatccaagcagttgagcttgtggggcgggctgtacctgtactagtcccttataagaagaagaaggagggaaacaaattttaccgaataaattcactcacacatcatatgatgcaagcctttttgaactactcggaaaactcaagtggacctgtcttgatccaatcattcactatgatcgcgccctataaatcgatgcatgagaccatttgccgtctagtggatgacaatctcgtacctttggttatcctcccatttcatgaaaaccaccaggttatggttggcaccaacttgactgcctcaatacgacaattcaacaacaatgtgcaggaatattcatcgtgtacagttggaatactagttgaaagagggttgtctggtcggctgaccatgtcccatttctcatacaatgtggctacatttttcattggcggaccagatgaccgcgaggctttggccttagcagcacgtatgttaggcaaccagaatgtggtcctcacagtatacaagtttattgtgcggaaaaaattaagcgagggtaactataatgaagacgaggagatggagaccgggctggatgagtcgatggtggatgagtttaagcagaggaataatgggaatgacggcttgaattggcgagatatcgaggttgaggactctatacagcttattgatgcaattatgaactcccagggggattatgatctagtaatggttggaaggcggcatgcggacagttcattgagggatgaggaaatgtcagaatttgtgcattatgcggagctgggaatgatcggtgacatgcttgcttcttcagacttctgtggtggaatggtgaatgttttggtgttgcaagaaagcaaggaacttagtagaaattatggatcagcttttcgaaagatttgggaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

691

Amino Acids

76.62

Weight (kDa)

5.96

Isoelectric Point (pI)

40.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001152)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43690 FvH4_7g25211 FvH4_7g25250 FvH4_7g25290 FvH4_7g25310
malus_domestica	MD01G1158700.v1.1 MD01G1158800.v1.1 MD07G1227200.v1.1 MD07G1227600.v1.1
prunus_persica	Prupe.2G257000_v2.0.a1 Prupe.2G257100_v2.0.a1
pyrus_communis	pycom01g17540
rosa_chinensis	RchiOBHm_Chr1g0371191 RchiOBHm_Chr1g0371201 RchiOBHm_Chr1g0371211
rosa_laevigata	RLG00000026978 RLG00000026979 RLG00000026980 RLG00000026981 RLG00000026983 RLG00000036771
rosa_multiflora	Rmu_co8222838.1_g000001 Rmu_sc0000631.1_g000023 Rmu_sc0001018.1_g000042 Rmu_sc0001018.1_g000044 Rmu_sc0001018.1_g000049 Rmu_sc0001018.1_g000050 Rmu_sc0001018.1_g000051 Rmu_sc0008081.1_g000003
rosa_roxburghii	Rroxscaffold_4G00285900 Rroxscaffold_4G00285910
rosa_rugosa	Rorug01G0361700 Rorug01G0361900 Rorug01G0362000 Rorug01G0362200 Rorug05G0460600
rosa_samantha	Rh1AG372000 Rh1AG372200 Rh1AG372300 Rh1BG335100 Rh1BG335500 Rh1BG335700 Rh1BG335800 Rh1CG348600 Rh1CG349000 Rh1CG349100 Rh1CG349200 Rh1DG366500 Rh1DG366900 Rh1DG367000 Rh5BG537300 Rh5CG560800 Rh5DG548900
rosa_wichuraiana	Rw1G032720 Rw1G032730 Rw1G032740 Rw5G047750 Rw5G047880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1218
AccB1I	GGYRCC	1 cut(s)	1448
AccB7I	CCANNNNNTGG	2 cut(s)	1441, 1654
AccI	GTMKAC	1 cut(s)	1668
AccII	CGCG	2 cut(s)	1346, 1611
AclWI	GGATC	2 cut(s)	1318, 2056
AcsI	RAATTY	6 cut(s)	47, 265, 485, 1241, 1255, 1928
AcuI	CTGAAG	2 cut(s)	670, 1962
AfaI	GTAC	6 cut(s)	339, 972, 1200, 1206, 1401, 1510
AfiI	CCNNNNNNNGG	6 cut(s)	439, 608, 1090, 1384, 1441, 1654
AflIII	ACRYGT	1 cut(s)	910
AgsI	TTSAA	9 cut(s)	88, 311, 844, 1040, 1049, 1291, 1480, 1529, 1795
AhlI	ACTAGT	3 cut(s)	925, 1207, 1522
AjnI	CCWGG	3 cut(s)	100, 1434, 1854
AjuI	GAANNNNNNNTTGG	2 cut(s)	257, 289
AluBI	AGCT	8 cut(s)	350, 377, 509, 898, 1183, 1831, 1948, 2054
AluI	AGCT	8 cut(s)	350, 377, 509, 898, 1183, 1831, 1948, 2054
Alw21I	GWGCWC	1 cut(s)	942
Alw26I	GTCTC	4 cut(s)	649, 827, 1361, 1724
AlwI	GGATC	2 cut(s)	1318, 2056
Ama87I	CYCGRG	1 cut(s)	1001
AoxI	GGCC	6 cut(s)	133, 240, 738, 986, 1004, 1620
ApeKI	GCWGC	3 cut(s)	788, 798, 1628
ApoI	RAATTY	6 cut(s)	47, 265, 485, 1241, 1255, 1928
Asp700I	GAANNNNTTC	2 cut(s)	654, 1255
AspLEI	GCGC	3 cut(s)	17, 1160, 1348
AspS9I	GGNCC	8 cut(s)	250, 566, 599, 1004, 1019, 1313, 1598, 1657
AsuC2I	CCSGG	2 cut(s)	784, 1735
AsuHPI	GGTGA	4 cut(s)	1002, 1102, 1973, 2011
AsuII	TTCGAA	1 cut(s)	2059
AsuNHI	GCTAGC	1 cut(s)	148
AvaI	CYCGRG	1 cut(s)	1001
AvaII	GGWCC	7 cut(s)	250, 566, 599, 1019, 1313, 1598, 1657
AxyI	CCTNAGG	1 cut(s)	130
BaeI	ACNNNNGTAYC	2 cut(s)	308, 341
BanI	GGYRCC	1 cut(s)	1448
BanII	GRGCYC	1 cut(s)	517
BbsI	GAAGAC	1 cut(s)	1722
Bbv12I	GWGCWC	1 cut(s)	942
BbvI	GCAGC	3 cut(s)	775, 785, 1640
BccI	CCATC	7 cut(s)	590, 749, 763, 876, 1015, 1720, 1744
BceAI	ACGGC	2 cut(s)	1362, 1804
BciT130I	CCWGG	3 cut(s)	102, 1436, 1856
BciVI	GTATCC	3 cut(s)	134, 1091, 1109
BclI	TGATCA	1 cut(s)	63
BcnI	CCSGG	2 cut(s)	784, 1735
BcoDI	GTCTC	4 cut(s)	649, 827, 1361, 1724
BcuI	ACTAGT	3 cut(s)	925, 1207, 1522
BfaI	CTAG	9 cut(s)	149, 506, 518, 926, 1121, 1208, 1382, 1523, 1871
BfmI	CTRYAG	1 cut(s)	39
BfoI	RGCGCY	1 cut(s)	18
BfuI	GTATCC	3 cut(s)	134, 1091, 1109
BisI	GCNGC	4 cut(s)	789, 799, 1629, 1889
BlsI	GCNGC	4 cut(s)	790, 800, 1630, 1890
Bme1390I	CCNGG	5 cut(s)	102, 784, 1436, 1735, 1856
Bme18I	GGWCC	7 cut(s)	250, 566, 599, 1019, 1313, 1598, 1657
BmeT110I	CYCGRG	1 cut(s)	1001
BmgT120I	GGNCC	8 cut(s)	250, 566, 599, 1004, 1019, 1313, 1598, 1657
BmiI	GGNNCC	1 cut(s)	1450
BmrFI	CCNGG	5 cut(s)	102, 784, 1436, 1735, 1856
BmsI	GCATC	4 cut(s)	761, 1266, 1350, 1828
BmtI	GCTAGC	1 cut(s)	152
BpiI	GAAGAC	1 cut(s)	1722
Bpu10I	CCTNAGC	1 cut(s)	1624
Bpu14I	TTCGAA	1 cut(s)	2059
BpuEI	CTTGAG	2 cut(s)	1114, 1291
BpuMI	CCSGG	2 cut(s)	784, 1735
Bsa29I	ATCGAT	1 cut(s)	1358
BsaAI	YACGTR	1 cut(s)	1634
BsaBI	GATNNNNATC	2 cut(s)	1392, 1866
BsaI	GGTCTC	2 cut(s)	1361, 1724
BsaJI	CCNNGG	8 cut(s)	101, 136, 294, 370, 783, 850, 1854, 1855
BsaXI	ACNNNNNCTCC	4 cut(s)	877, 907, 1097, 1127
Bsc4I	CCNNNNNNNGG	6 cut(s)	439, 608, 1090, 1384, 1441, 1654
Bse21I	CCTNAGG	1 cut(s)	130
Bse3DI	GCAATG	3 cut(s)	159, 401, 731
Bse8I	GATNNNNATC	2 cut(s)	1392, 1866
BseBI	CCWGG	3 cut(s)	102, 1436, 1856
BseCI	ATCGAT	1 cut(s)	1358
BseDI	CCNNGG	8 cut(s)	101, 136, 294, 370, 783, 850, 1854, 1855
BseGI	GGATG	4 cut(s)	1393, 1747, 1762, 1918
BseJI	GATNNNNATC	2 cut(s)	1392, 1866
BseLI	CCNNNNNNNGG	6 cut(s)	439, 608, 1090, 1384, 1441, 1654
BseMI	GCAATG	3 cut(s)	159, 401, 731
BseMII	CTCAG	1 cut(s)	261
BseRI	GAGGAG	1 cut(s)	1736
BseXI	GCAGC	3 cut(s)	775, 785, 1640
BseYI	CCCAGC	3 cut(s)	10, 509, 1948
BsgI	GTGCAG	1 cut(s)	1511
Bsh1236I	CGCG	2 cut(s)	1346, 1611
BshFI	GGCC	6 cut(s)	135, 242, 740, 988, 1006, 1622
BshNI	GGYRCC	1 cut(s)	1448
BshVI	ATCGAT	1 cut(s)	1358
BsiHKAI	GWGCWC	1 cut(s)	942
BsiHKCI	CYCGRG	1 cut(s)	1001
BsiSI	CCGG	3 cut(s)	239, 783, 1734
BslFI	GGGAC	2 cut(s)	1196, 1543
BslI	CCNNNNNNNGG	6 cut(s)	439, 608, 1090, 1384, 1441, 1654
BsmAI	GTCTC	4 cut(s)	649, 827, 1361, 1724
BsmFI	GGGAC	2 cut(s)	1196, 1543
BsmI	GAATGC	1 cut(s)	79
BsnI	GGCC	6 cut(s)	135, 242, 740, 988, 1006, 1622
Bso31I	GGTCTC	2 cut(s)	1361, 1724
BsoBI	CYCGRG	1 cut(s)	1001
Bsp119I	TTCGAA	1 cut(s)	2059
Bsp1286I	GDGCHC	2 cut(s)	517, 942
Bsp1407I	TGTACA	1 cut(s)	1508
Bsp143I	GATC	6 cut(s)	63, 1323, 1341, 1867, 1956, 2048
BspANI	GGCC	6 cut(s)	135, 242, 740, 988, 1006, 1622
BspCNI	CTCAG	1 cut(s)	262
BspDI	ATCGAT	1 cut(s)	1358
BspFNI	CGCG	2 cut(s)	1346, 1611
BspHI	TCATGA	1 cut(s)	1423
BspLI	GGNNCC	1 cut(s)	1450
BspMAI	CTGCAG	1 cut(s)	43
BspOI	GCTAGC	1 cut(s)	152
BspPI	GGATC	2 cut(s)	1318, 2056
BspT104I	TTCGAA	1 cut(s)	2059
BspT107I	GGYRCC	1 cut(s)	1448
BspTNI	GGTCTC	2 cut(s)	1361, 1724
BsrDI	GCAATG	3 cut(s)	159, 401, 731
BsrGI	TGTACA	1 cut(s)	1508
BssECI	CCNNGG	8 cut(s)	101, 136, 294, 370, 783, 850, 1854, 1855
BssMI	GATC	6 cut(s)	63, 1323, 1341, 1867, 1956, 2048
BssNAI	GTATAC	1 cut(s)	1669
Bst1107I	GTATAC	1 cut(s)	1669
Bst2UI	CCWGG	3 cut(s)	102, 1436, 1856
Bst4CI	ACNGT	6 cut(s)	118, 337, 702, 1513, 1666, 1901
Bst6I	CTCTTC	1 cut(s)	713
BstAUI	TGTACA	1 cut(s)	1508
BstBAI	YACGTR	1 cut(s)	1634
BstBI	TTCGAA	1 cut(s)	2059
BstC8I	GCNNGC	8 cut(s)	150, 434, 738, 1147, 1194, 1281, 1893, 1971
BstDEI	CTNAG	6 cut(s)	130, 244, 270, 453, 1624, 2033
BstDSI	CCRYGG	2 cut(s)	370, 850
BstF5I	GGATG	4 cut(s)	1393, 1747, 1762, 1918
BstFNI	CGCG	2 cut(s)	1346, 1611
BstH2I	RGCGCY	1 cut(s)	18
BstHHI	GCGC	3 cut(s)	17, 1160, 1348
BstKTI	GATC	6 cut(s)	66, 1326, 1344, 1870, 1959, 2051
BstMAI	GTCTC	4 cut(s)	649, 827, 1361, 1724
BstMBI	GATC	6 cut(s)	63, 1323, 1341, 1867, 1956, 2048
BstMWI	GCNNNNNNNGC	4 cut(s)	506, 1155, 1189, 1628
BstNI	CCWGG	3 cut(s)	102, 1436, 1856
BstNSI	RCATGY	2 cut(s)	1895, 1969
BstSCI	CCNGG	5 cut(s)	100, 782, 1434, 1733, 1854
BstSFI	CTRYAG	1 cut(s)	39
BstUI	CGCG	2 cut(s)	1346, 1611
BstV1I	GCAGC	3 cut(s)	775, 785, 1640
BstV2I	GAAGAC	1 cut(s)	1722
BstZ17I	GTATAC	1 cut(s)	1669
Bsu15I	ATCGAT	1 cut(s)	1358
Bsu36I	CCTNAGG	1 cut(s)	130
BsuI	GTATCC	3 cut(s)	134, 1091, 1109
BsuRI	GGCC	6 cut(s)	135, 242, 740, 988, 1006, 1622
BsuTUI	ATCGAT	1 cut(s)	1358
BtgI	CCRYGG	2 cut(s)	370, 850
BtsCI	GGATG	4 cut(s)	1393, 1747, 1762, 1918
BtsI	GCAGTG	1 cut(s)	402
BtsIMutI	CAGTG	1 cut(s)	402
Cac8I	GCNNGC	8 cut(s)	150, 434, 738, 1147, 1194, 1281, 1893, 1971
CciI	TCATGA	1 cut(s)	1423
CfoI	GCGC	3 cut(s)	17, 1160, 1348
Cfr13I	GGNCC	8 cut(s)	250, 566, 599, 1004, 1019, 1313, 1598, 1657
ClaI	ATCGAT	1 cut(s)	1358
CseI	GACGC	1 cut(s)	548
CsiI	ACCWGGT	1 cut(s)	1434
Csp6I	GTAC	6 cut(s)	338, 971, 1199, 1205, 1400, 1509
CspCI	CAANNNNNGTGG	4 cut(s)	142, 177, 753, 788
CviAII	CATG	9 cut(s)	28, 61, 289, 952, 1364, 1424, 1555, 1892, 1966
CviQI	GTAC	6 cut(s)	338, 971, 1199, 1205, 1400, 1509
DdeI	CTNAG	6 cut(s)	130, 244, 270, 453, 1624, 2033
DpnI	GATC	6 cut(s)	65, 1325, 1343, 1869, 1958, 2050
DpnII	GATC	6 cut(s)	63, 1323, 1341, 1867, 1956, 2048
Eam1104I	CTCTTC	1 cut(s)	713
EarI	CTCTTC	1 cut(s)	713
EciI	GGCGGA	1 cut(s)	1611
Eco147I	AGGCCT	2 cut(s)	135, 988
Eco24I	GRGCYC	1 cut(s)	517
Eco31I	GGTCTC	2 cut(s)	1361, 1724
Eco32I	GATATC	2 cut(s)	126, 1807
Eco47I	GGWCC	7 cut(s)	250, 566, 599, 1019, 1313, 1598, 1657
Eco57I	CTGAAG	2 cut(s)	670, 1962
Eco81I	CCTNAGG	1 cut(s)	130
Eco88I	CYCGRG	1 cut(s)	1001
EcoO109I	RGGNCCY	1 cut(s)	250
EcoRI	GAATTC	1 cut(s)	265
EcoRII	CCWGG	3 cut(s)	100, 1434, 1854
EcoRV	GATATC	2 cut(s)	126, 1807
EcoT22I	ATGCAT	1 cut(s)	1365
EcoT38I	GRGCYC	1 cut(s)	517
FaeI	CATG	9 cut(s)	31, 64, 292, 955, 1367, 1427, 1558, 1895, 1969
FaqI	GGGAC	2 cut(s)	1196, 1543
FatI	CATG	9 cut(s)	27, 60, 288, 951, 1363, 1423, 1554, 1891, 1965
FauI	CCCGC	3 cut(s)	153, 441, 1185
FauNDI	CATATG	2 cut(s)	757, 1272
FbaI	TGATCA	1 cut(s)	63
FblI	GTMKAC	1 cut(s)	1668
Fnu4HI	GCNGC	4 cut(s)	789, 799, 1629, 1889
FokI	GGATG	4 cut(s)	1400, 1754, 1769, 1925
FriOI	GRGCYC	1 cut(s)	517
Fsp4HI	GCNGC	4 cut(s)	789, 799, 1629, 1889
FspBI	CTAG	9 cut(s)	149, 506, 518, 926, 1121, 1208, 1382, 1523, 1871
GlaI	GCGC	3 cut(s)	16, 1159, 1347
GluI	GCNGC	4 cut(s)	789, 799, 1629, 1889
GsaI	CCCAGC	3 cut(s)	14, 513, 1952
HaeII	RGCGCY	1 cut(s)	18
HaeIII	GGCC	6 cut(s)	135, 242, 740, 988, 1006, 1622
HapII	CCGG	3 cut(s)	239, 783, 1734
HgaI	GACGC	1 cut(s)	548
HhaI	GCGC	3 cut(s)	17, 1160, 1348
Hin1II	CATG	9 cut(s)	31, 64, 292, 955, 1367, 1427, 1558, 1895, 1969
Hin6I	GCGC	3 cut(s)	15, 1158, 1346
HinP1I	GCGC	3 cut(s)	15, 1158, 1346
HinfI	GANTC	5 cut(s)	168, 180, 999, 1745, 1820
HpaII	CCGG	3 cut(s)	239, 783, 1734
HphI	GGTGA	4 cut(s)	1002, 1102, 1973, 2011
Hpy166II	GTNNAC	4 cut(s)	1022, 1313, 1509, 1669
Hpy188I	TCNGA	7 cut(s)	140, 271, 538, 649, 1300, 1927, 1981
Hpy188III	TCNNGA	4 cut(s)	688, 879, 1321, 1424
Hpy8I	GTNNAC	4 cut(s)	1022, 1313, 1509, 1669
Hpy99I	CGWCG	1 cut(s)	542
HpyAV	CCTTC	3 cut(s)	461, 1222, 1878
HpyCH4III	ACNGT	6 cut(s)	118, 337, 702, 1513, 1666, 1901
HpyCH4IV	ACGT	2 cut(s)	912, 1633
HpyF10VI	GCNNNNNNNGC	4 cut(s)	506, 1155, 1189, 1628
HpyF3I	CTNAG	6 cut(s)	130, 244, 270, 453, 1624, 2033
HpySE526I	ACGT	2 cut(s)	912, 1633
Hsp92II	CATG	9 cut(s)	31, 64, 292, 955, 1367, 1427, 1558, 1895, 1969
HspAI	GCGC	3 cut(s)	15, 1158, 1346
Ksp22I	TGATCA	1 cut(s)	63
Kzo9I	GATC	6 cut(s)	63, 1323, 1341, 1867, 1956, 2048
LmnI	GCTCC	3 cut(s)	374, 903, 1945
Lsp1109I	GCAGC	3 cut(s)	775, 785, 1640
LweI	GCATC	4 cut(s)	761, 1266, 1350, 1828
MabI	ACCWGGT	1 cut(s)	1434
MaeI	CTAG	9 cut(s)	149, 506, 518, 926, 1121, 1208, 1382, 1523, 1871
MaeII	ACGT	2 cut(s)	912, 1633
MaeIII	GTNAC	4 cut(s)	622, 778, 1703, 1961
MalI	GATC	6 cut(s)	65, 1325, 1343, 1869, 1958, 2050
MboI	GATC	6 cut(s)	63, 1323, 1341, 1867, 1956, 2048
MfeI	CAATTG	1 cut(s)	447
MhlI	GDGCHC	2 cut(s)	517, 942
MlyI	GAGTC	3 cut(s)	993, 1754, 1814
MmeI	TCCRAC	3 cut(s)	561, 1495, 1861
Mph1103I	ATGCAT	1 cut(s)	1365
MroXI	GAANNNNTTC	2 cut(s)	654, 1255
MseI	TTAA	3 cut(s)	995, 1694, 1764
MslI	CAYNNNNRTG	1 cut(s)	59
MspI	CCGG	3 cut(s)	239, 783, 1734
MspR9I	CCNGG	5 cut(s)	102, 784, 1436, 1735, 1856
MunI	CAATTG	1 cut(s)	447
Mva1269I	GAATGC	1 cut(s)	79
MvaI	CCWGG	3 cut(s)	102, 1436, 1856
MvnI	CGCG	2 cut(s)	1346, 1611
MwoI	GCNNNNNNNGC	4 cut(s)	506, 1155, 1189, 1628
NciI	CCSGG	2 cut(s)	784, 1735
NdeI	CATATG	2 cut(s)	757, 1272
NdeII	GATC	6 cut(s)	63, 1323, 1341, 1867, 1956, 2048
NheI	GCTAGC	1 cut(s)	148
NlaIII	CATG	9 cut(s)	31, 64, 292, 955, 1367, 1427, 1558, 1895, 1969
NlaIV	GGNNCC	1 cut(s)	1450
NmeAIII	GCCGAG	2 cut(s)	275, 810
NmuCI	GTSAC	1 cut(s)	1961
NsiI	ATGCAT	1 cut(s)	1365
NspI	RCATGY	2 cut(s)	1895, 1969
NspV	TTCGAA	1 cut(s)	2059
PaeI	GCATGC	1 cut(s)	1895
PagI	TCATGA	1 cut(s)	1423
PasI	CCCWGGG	1 cut(s)	1855
PceI	AGGCCT	2 cut(s)	135, 988
PctI	GAATGC	1 cut(s)	79
PdmI	GAANNNNTTC	2 cut(s)	654, 1255
PfeI	GAWTC	2 cut(s)	168, 180
PflFI	GACNNNGTC	1 cut(s)	1555
PflMI	CCANNNNNTGG	2 cut(s)	1441, 1654
PkrI	GCNGC	4 cut(s)	790, 800, 1630, 1890
PleI	GAGTC	3 cut(s)	993, 1753, 1814
PpsI	GAGTC	3 cut(s)	993, 1753, 1814
Ppu21I	YACGTR	1 cut(s)	1634
PpuMI	RGGWCCY	1 cut(s)	250
PsiI	TTATAA	1 cut(s)	1218
Psp5II	RGGWCCY	1 cut(s)	250
Psp6I	CCWGG	3 cut(s)	100, 1434, 1854
PspFI	CCCAGC	3 cut(s)	10, 509, 1948
PspGI	CCWGG	3 cut(s)	100, 1434, 1854
PspN4I	GGNNCC	1 cut(s)	1450
PspPI	GGNCC	8 cut(s)	250, 566, 599, 1004, 1019, 1313, 1598, 1657
PspPPI	RGGWCCY	1 cut(s)	250
PstI	CTGCAG	1 cut(s)	43
PsyI	GACNNNGTC	1 cut(s)	1555
RsaI	GTAC	6 cut(s)	339, 972, 1200, 1206, 1401, 1510
RsaNI	GTAC	6 cut(s)	338, 971, 1199, 1205, 1400, 1509
RseI	CAYNNNNRTG	1 cut(s)	59
SaqAI	TTAA	3 cut(s)	995, 1694, 1764
SatI	GCNGC	4 cut(s)	789, 799, 1629, 1889
Sau3AI	GATC	6 cut(s)	63, 1323, 1341, 1867, 1956, 2048
Sau96I	GGNCC	8 cut(s)	250, 566, 599, 1004, 1019, 1313, 1598, 1657
SchI	GAGTC	3 cut(s)	993, 1754, 1814
ScrFI	CCNGG	5 cut(s)	102, 784, 1436, 1735, 1856
SduI	GDGCHC	2 cut(s)	517, 942
SexAI	ACCWGGT	1 cut(s)	1434
SfaNI	GCATC	4 cut(s)	761, 1266, 1350, 1828
SfcI	CTRYAG	1 cut(s)	39
SfuI	TTCGAA	1 cut(s)	2059
SinI	GGWCC	7 cut(s)	250, 566, 599, 1019, 1313, 1598, 1657
SmiMI	CAYNNNNRTG	1 cut(s)	59
SmlI	CTYRAG	2 cut(s)	1129, 1306
SmoI	CTYRAG	2 cut(s)	1129, 1306
SpeI	ACTAGT	3 cut(s)	925, 1207, 1522
SphI	GCATGC	1 cut(s)	1895
SseBI	AGGCCT	2 cut(s)	135, 988
SspI	AATATT	2 cut(s)	840, 1499
SspMI	CTAG	9 cut(s)	149, 506, 518, 926, 1121, 1208, 1382, 1523, 1871
StuI	AGGCCT	2 cut(s)	135, 988
StyD4I	CCNGG	5 cut(s)	100, 782, 1434, 1733, 1854
TaaI	ACNGT	6 cut(s)	118, 337, 702, 1513, 1666, 1901
TaiI	ACGT	2 cut(s)	915, 1636
TaqI	TCGA	7 cut(s)	704, 880, 1065, 1358, 1748, 1809, 2059
TatI	WGTACW	3 cut(s)	337, 1204, 1508
TauI	GCSGC	1 cut(s)	1891
TfiI	GAWTC	2 cut(s)	168, 180
Tru1I	TTAA	3 cut(s)	995, 1694, 1764
Tru9I	TTAA	3 cut(s)	995, 1694, 1764
TscAI	CASTG	1 cut(s)	402
TseFI	GTSAC	1 cut(s)	1961
TseI	GCWGC	3 cut(s)	788, 798, 1628
Tsp45I	GTSAC	1 cut(s)	1961
TspGWI	ACGGA	2 cut(s)	387, 839
TspRI	CASTG	1 cut(s)	402
Tth111I	GACNNNGTC	1 cut(s)	1555
Van91I	CCANNNNNTGG	2 cut(s)	1441, 1654
VpaK11BI	GGWCC	7 cut(s)	250, 566, 599, 1019, 1313, 1598, 1657
XapI	RAATTY	6 cut(s)	47, 265, 485, 1241, 1255, 1928
XceI	RCATGY	2 cut(s)	1895, 1969
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1442
XmiI	GTMKAC	1 cut(s)	1668
XmnI	GAANNNNTTC	2 cut(s)	654, 1255
XspI	CTAG	9 cut(s)	149, 506, 518, 926, 1121, 1208, 1382, 1523, 1871
Zsp2I	ATGCAT	1 cut(s)	1365

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.