Rorug01G0361700

cation H( ) antiporter 15-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
47706833 .. 47720968
14136 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0361700.1

Sequence Viewer

Length: 9249 bp
ATGGAGCCCGACGGCGCAGCGCCGATGCAAGTCGAGTCCGCGGCGGACAAAAGCCCTAACTCGGAGCTCCCTCCCAAATCCAGAGAAGAAGGCGAGCTCTCTTCCGATGATAATGACGAAAATCCTGTTTTCTCGGTTGCACGTTCCACTGGTACTCCCGGGCCCATGCTGGTTCCACCAGTGAACAAATTCACCCATGGGAATCAAGCGGGGAAGGCTGTATCTCCTGCAAGCTCTACTGATATTCAGTGCCAAACCTCCAAGCAACCTACTTCCCAGAAGAGCAATGATGCGAACAGAGTACCGTTAAAACCTGCTACACCTGGATGGCGTCCTCCACGTGCCCACTCGGGGCCCAACAATAATCTTGTGATAAGCTTCTCAGATGATGACAGTCAGAGTGATTCTGAAGAAAAAGAGCGTGGGAAACTAAAAGCTTCACAAACTAAAAGTAATATGGCTCGAGGGAATGCTAATGGAAAACCACCCATTTCTTCACTTGCAAAACCAAACAAGTTGGGACAGCCTGCCAGAAATGTGAACAAAGTTATGCCCAAAAAGTTGTCTATGAATCGCACATTTATGACATCAATGGCAAATATCCGTGGAGTTAATTCTAGAGATTCTGTGCCTTCATCAGTTGAGCAAGGATCTCGAGCTGGAAATTTCAATTCCATGAACAAAAATATAGTGAACAGAGAGCGTGGATATGAACTTCAAGACTTGCGACAGCAGATTGCACTTAAGGAGACTGAACTGAAGCTCAAGGAAAGTGAACTGAAGCTTAAGTCTGCCCAGCGAACTAAGGAATCAGTTACATGCAAGGATGAGAATGCTAAGGGCCTGCACAGAGATGGAGCTGGTAAGTACAGTACCGGATATTCTGATGGTATGCAGACAGAACCAAAAGAGCCAGATAAAAAGCGTATAAAAGTCAGCGGTGCTTTTTCAACTCAGCTAACTGCACTAAGCCCACAAGAATTACCTGTTGCAAAACCTTTATTACCATCAAAAACCCCAGCAATGGAGGACAATACTCAATTGAACACCGGTAAGATTGATTATCTCCAAAAAGAAAATCAAGTGCGTCCAACAGAGTCGAGCATTGTAAAATGGCAAGATCCTAATGATAAACATGTTGCTGGAATGTTGGGAAATATACATACTGGACTGAAAGATGGTGCTGGCATCAATGCTAGATATATCCAGTGTGATGGGAGGGGTAAGCAGATGGATTCTGTTGTTACACCAAACCAGGGTAAATCACTGGCAAATATGACGCGCATTGATTTTCCAAATAACTTGAATAGTGTGGAGTTGAATCATACAAATACTAACACAAACACAAATAGCGGCCATCCAGAACCTGGATCCTTCTTAAACAATCCAACATCAGGAAAGAATTTAATGGGAAGTGGTGACCATCAGGAAACCATATCCATTGACAAGAGACTTGAGCCCTCATTCTACAGTAAATGTCAGGCACTCCTAAACAACACAAACCTCTCGAACTGTTTTGGTAATGCAAACGTTATAGGAGATGACAACATGAAGATGCAGTCATTGGTTCAAATGGAGGAAATGCTAGACAAGAATCTGGAGGAAGCACAAGAGCATAGGCGAAGGTGTGAAATTGAAGAACAAAATGCTCTTAAAGCTTATCGTAAAGCGCAGAGGGCTCTTCTTGAGGCGAATGCTACGTGTGATGTTCTTTATCGGAAAAGGGAACTATATTCTGCCGACTTCCGTGCTTATGTTATTAACAATCCCAGTTTGTTATGTTCCTCAAGGCAGAACGAACAAGCTGGACTTGGGTTGGATCACCCTAATAACTTGTCTGAAAATGTGAATTTGATACCCACGTCAAGCCATCAGATGCCGCCGGTCCAGAATGACTGCAATCTAGCGGTTATTGATTCCAACATCCAATGCGTTAACAGCGCTCAGATCCCGAATCCCTACCAGCATTTGAGTGGAGAAAACATTGGCTCAGAACCAGGCAGTGAACCTGACGCTAGTACATCTGAGCCAGTGCCTCTTCTGGGCAATACTGGCACAGATGGAGTTTGCTCTCCATCCAATGAACCAAATGGTTCAGCAAATGAAGATGATGATACATTTTCATTCGAAAATGAATCTGTTCAACCCAATGGTGAATGCCATCTTGTAGACAAACAAAAGGAGACAGATAATGAATCAAATAGGATAATGTCTATTGACCCCAACGAGGAATCTTTACTTCTCGAAAAAGCTTTGAGGTCTACACTATTTGCAAAGCTAGGAACAAAAAATGTGTCGAAGAACAGTGTTGTATGTAATGGCACAGGGATTGCAGTGGAACGAGAGGCTGAAAATGATGCGAGAAGTGAAGAACCACAAAAAGTAAACGGGAGTTCTCCCGTCTCAGAGGTGAAGAAAAATCAACAATCTGATATTGAAGGCGTTGATGTGCATGAAAAAAGTTTCACTGAGGCTCCTCTTGAGATCCAGAGAAAGCATTCCATCGAACATTTGTCTTTGAATTCTCATTCCAGTGGATATTTTGAGGACAGATGTTCCTTTGGAGGTGACCACTCATTGACTTCTATGATCTTTTCGCCTTCCTACATCTTGAGTAGTGCTTTTGGGTATATGAAGGTTATAGACCCAAACAATGTGATGGAACATCAGGACAGAAGTCAACAGAGTGGAGCTCGTGATACTAATATTGAAGAAGGTGCTTGTATAAACTCTGGTAAAGTGCAGTTTAGCAGTACCATGGTAGACACAACGAAAAAGGCTCTGGTGAAATTATGTGATAGAGAATATGGCTCTTATACCACTGGTCCTGCTGTTGATCCCTTTTGGCCACTTTGCATGTATGAGCTACGAGGAAAATGCAACAATGATGAGTGTCCTTGGCAGCATGTTAAGGACTACTCTACCACCGATATGTCTCCACATCAGCATGATAATTCTGAAATTGCTGGTTGTCAGGTTGGACAAACGTTTTGCAAAGAAAAGTGTGATGGTTCAGCAAAAGTTCCCTGGCATCACAATTTTACGACTTTACCAACTTACCTTGTTGGCTTAAGTACTCTAAAAGCTGATCTGCATTCATATGATTCTGTTCTAGCACGGAGAAATGGTGAATGCTGGAAGAAGTGTTTCAGCCTTTTCTTAGCATTGTCAAAGTCGTTTCAAAAAGATTTTTCTACAGATGGGCCAGTCTCGCATGGAAATGACGGCCGCATCGAGGTCCCTGTGAGTTGGAACAGACAGTCATCATATTTCCAGAGTAGAAATAGCGGAGTGAATCAACCGGATCAAGCTTTGGCTGACAATGAGCAATACCTGGAAAAGGCTCTTTTAATTTTCAGTCAAGAGGTCAATACACTTGAGGGTATGAAAAAGGCTCTTCCTGTATTGTCACGTGCTCTTGAGGCTGATCCAACATCCGTAGTTCTCTGGGTCTTGTATCTGCTTATTTACTATAGCAATATGAAGTCAGTAGGGAAGGATGACATGTTCTCTTGTGCGGTCAACTACAATGATCAATCTTATGAACTTTGGATTATGTTCATCAACAGTCGGGTGCGGCTAAGTGACCGATTGGTTACCTACGATCTTGCCTTCTCAGCACTGTGCCGCCATGCTTCTTCTGCCAAAGATAAAGTGCATGCTAGTGCTTGTATCTTAGACTTAGTTTTGCAAATGGTGGATTGTCTATGCATGTCTGGGAATGTTGAGAGGGCCATTCAGAAAATTTGTGGACTCTTCTCTGCTGCCACAAATATTTATGACCCCGATTCTCCATTGCTTACTGATATGCCCAAATGCCTAACAAGTCATGACAAATGTATTTTGGGGGTGTGTTGTGTTTACTTGGTTATCTATAGGAAACTTCCTGATGCTGTAGTACTGCAGTTTGAATGTCAGAAAGAACTGTTTGCAATAGAATGGCCTTCTATTGAATTAACAGATAATGAAAAGCAGAGGGCTGTCAAACTGATGGAAGCAGTAGAAGATTCTGTATGTCAATCGCTGGATAAAAGTGATTTTAATCTCAGTTTGGCACATTTTTTTGCTCTGAGTCACTTAAGGTGCATGGCAGCTATTGACAGCTTAGAAAGGTGTAGTAATCTTCTGGGTAAATATCTTAAAATGTTCCCGTCCTGCTTAGAGCTTGTTCTAATATCGGCAAGGGCCCAAAAACATGCTCCTGGTGATTCGCTTTTTGACGGGTTTGAGGAAGCCCTAAATAATTGGCCAAAAGAAGTCCCCGGAATTCAATGCATCTGGAATCAGTATGTTGTATATGCCTTTCAGAAAGGACAATTTGATTTTGGTAAAGAACTTATAGGCCGTTGGTTTCATTCTTTTTGGCAAGTTCATTGTATTCGAAATGGTACATTAGATGACATGGAGTGTGATAACTCAGATGGCTCACTAGGATTGGCTTCGGATTCAGTTCTGCAGACACTTAATACTGATTCTAAGCAGATGGACGTAATGTTTGGATATCTTAATCTCTCGCTGTATAAGTTAATCCAAAATGATCAGATTGAAGCTCGCTTAGCCCTCGAGAGGGCATTGAAGGCTGCTGTTCCAGAATATTCAAAGCATTGCATGAGGGAGCATGCATTATTTATGCTAAGTGAGGAATCAGGATTTAAGGAGAGTGGTTGTCCTAGTGGCATGGAGAAGATTTTGAAACGTTACATAGGTGATGCCAAAGTTTTCCCTTCATCTGAGCCATTATCTAGGCAGTTTATTGCTGACATCAAGAAGCCAAGAGTACGACAGCTGGTTAGTAGCGCATTCAGTCCATTCTCATCTGATTTTGCTCTTGTAAATTCAGTTCTTGAAGTGTTGTATGGACCATCTCTTTTACCGAAAAAGACTGGTGAGACAAAATGTCTGGTGGATTTTGTTGAAGCCATCTTGGATATAACTCCATCCAACTATCAGTTAGCTATTTCTGTCTGTAAGCTGTTAATTACTGGCAACAATGCGACTGATATTACTTCAGTCAGTGTTTTGTTCTGGGCTAGCTCAAACTTGGTCAGTGCAATCTTTCGTGCTGTCCCAATTCCGCCAGAGTATGTATGGGTAGAAGCTGCAGACATATTGGGCAATATGGTGAATGTTGAGGTTATTTCTGAGAGGTTTTATAAGAGAGCTTTATCTGTATATCCTTTCTCTGTCAAGTTGTGGAAATCCTATTACATGCTTTCTATGATGACTACAGGAAATATGAACACTGTTGTGGAAACAGCAAAGGAAAAAGGGCACGGATTTAGCGCCATGAATAACCTGAAACTCTACTCGGAGGTCTCTCTGAACCTCCAGTTACAGTCCCCACAAGAAGAGCTCATCCTCTTCTCCGCCTTCGACATCGAGCAGAGCCGCCTCTTCTTCGCCTCCTCCGCCAACAACATCTACGCCACCCACCTCTCCTCTCTCCAGCATGAGAGGGCGTGGAGCAAGACCTCGATTCCCGCGCAGGTCACTCGGATCGAGCTGGATGAGGCCGAGGACTCCATCACTTCGTTTGTTTACCTCATGGAGAAAGAGGCGCTCTTGGTTGGGACCAGTAAAGGCCTTCTGCTGCTGCATAGTGTGGATGACAATGCCTCGCAAGTCGTCGGCGGCGTCGACGGCGGCGTGAGGTGTGTTTCGGCTAGTCCCGATGGAGATGTTCTGGCTATAATTACCGGGACTGGGCAGATACTGGTGATGACTCTGGATTGGGACTTGCTGTATGAGACTGCACTTGAGGATGTTGCTGACGATGGCAGCCGCATATGTGATCTAATATTGTCGAATATTGAAAGCCCCATTGCTTGGCGCGGTGATGGGAAATACTTTGTCACACTAAGCGAGGCGTTGGATTCTACCTCTTTGCTTAAGAGGCTTAAGGTTTGGGAGCGACATTCAGGGGCGTTACATGCTGTTTCGGAATCAAAGTCGTTCATGGGTTCAGTGGTGGACTGGATGCCAAGTGGGGCGAAAGTTGCAGCTGTTTATGATAGGAAAGCGCAAAATGAGTGTCCTTCAATAGTGTTTTATGAGAGGAATGGGTTAGAAAGAAGCCAGTTTAGCATTAATGAGCAAGTTAATGCAACCGTAGAATTTCTCAAGTGGAATTGCAGTTCAGATCTTCTTGCTGCCGTTGTTAGATGTGATAACTATGACTGTGTCAAGATTTGGTATTTCAGTAACAATCACTGGTACTTAAAATCTGAAATTAGATACCCAAGACACGACGGAGTGAGGTTTGTCTGGAATCCAACAAGGCCACTGCAGTTAACATGTTGGACTCTTGGCGGCCAGATTACATCTTACAACTTCATATGGAATTCAGCCGTGATGGAGGACTCAACTGCATTAGTAATTGATGACTCCAAGATACTTGTGACCCCCCTTTCTTTATACTTAATGCCACCTCCTATGTATTTATTCAGCCTTAAATTCTCGAGTGTTGTCCGGGACTTTGCCTTCTACTCCAAGAATTCTAAGAACTGCTTGGCTGCTTTTCTATCAGATGGCTGTTTATGTATTGTAGAGCTTCCCGCAACTGATACATGGGAAGATCTAGAAGGCAAAGAGTTCCTTGTTGAAGCGTCCAGTTCTGATTCACCATTTGGTTCAGTTTTGCATCTAATATGGTTGGACCCCCATAAGATTCTTGCTGTTTCTCACCATGGGTTCAGTCATAGTAATTACTTGCCTCAGACTTCACTTGGTGAGGAAGACCTTGGTTTTTATTTGCAGGAAATTGAGCTTACATGCTCTGAGGATCATGTCCCAGGTTTATTGACATGCTCAGGATGGAATGCTAAAGTCTCCAGTCGAAACTCTCTAGAAGAGACCATTATTGGAATTGCTCCTAATCCTGCTTCAAAAGGTTCAGCATTTGTTCAATTTGATGGTGGAAAGGTTTATGAGTATGTTCCAAAGTTAGGCATCTCCCGAGGGGCTTCAAAACTTGATTGGAGCTTCTCATCAACTTGCCCTTGGATGAGTGTGGTTCTAGTTGGAGACAGTGTGTCATCGAAACCTCTGCTTTTCGGACTTGATGACAGTTGTAGGCTGCACGTCAGTGGAAAGATAATATGCAACAACTGCAGTAGTTTTTCATTCTACTCAAATTTGGCTGATCAGGTGATCACACATTTAATTTTGGCAACTAAGCAGGATTTGCTTTTTGTTGTTGAAATATCAGATGTATTGCAAAAAGAACTTGAGATAAAACATGAGAACTTCATCCATGCTGGTAAGAAGAAAAGAGAAGAAAATAGAAACTTTATAAACATATGGGAAAGAGGTGCCAAAGTTGTTGGTGTCGTTCATGGAGATGAAGCCGCTGTCCTGTTGCAACCGTCTCGTGGCAATCTAGAATGCATTTACCCAAGAAAGTTGGTCCTGGCCTCTATTTGCAATGCATTGGTCCAAAGGCGTTTTAGAGATGCACTTCTCATGGTGAGGCGTCAGAGGATAGATTTCAATGTCCTTGTTGACTATTGTGGTTGGCAGGTGTTTCTTCAATCAGCTGCAGAATTTGTCAAGCAGGTCAATAATTTGAACCACATGACTGAGTTTGTTTGTGCCATAAAGAATGAAGATACTACAGAGACGCTATATAAGGAATTTATTTCTTCACCCTCTCCTAAAGAAGCTAAAGATGTGCAATCGCACGACTCCAAGGGTTTTGATTCCAATAACAAGGTATCTTCTGTGCTGCTGGCCATTAGGAAGGCTCTTGAGGATCAATTACCGGAAACTCCTGCAAGGGAGCTTTGCATTCTGACCACTCTTGCTCGTAGTGACCCCCCTGCACTTGATGAGGCTTTAGAGAGAATAAAAGTTATCCGTGAGGCAGAATTGTCAGGTTCCAATGACCAAAGGAGAATGTCTTACCCCACTGCTGAAGAGGCTTTGAAGCATCTCCTATGGTTATCTGATTCGGAATCTGTTTATGAGGCAGCTTTGGGCCTTTATGATTTGAACCTTGCAGCTATGGTGGCATTGAATTCTCAGCAGGACCCTAAAGAATTCCTTCCTTTTCTTCAAGAATTGGAAAGTATGCCTGATACTTTAATGCGCTATAACATTGACCTTCGGCTGCAGAGGTTTGAGAAGGCCCTCAAGCACATTGTTTCTGCAGGAGACACTTGCTATGCAGATTCTATGAACCTGATGAAGAAAAATCCTCAACTCTTTCCACTGGGACTTCAGCTGATTGCTGATCCTAACAAGAAGAGGCAAGTTCTCAACGCTTGGGGAGATCATCTTAGCAGTGAAAAATGCTTTGAGGATGCTGCTACCACTTATTTGTGCTGCTCCAGTTTTGAGAAGGCTTTGAAGTCGTACCGTTCTTGTGGTAATTGGAGTAAGGTGCTTACAGTTGCCGGGCTTCTAAAACTGGGTGAAGATGAGATAATGCAACTGGCTCATGAGCTATGTGAAGAATTGCAAGCTCTTGGTAAACCAAAGGAAGCTGCCAAAATTGCGCTGGAGTATTGTGGTGAAATTAACAATGGGATGAGTTTGTTGATTAGCGCAAGGGACTGGGAGGAAGCTTTAAGAGTTGCTTTAATGCACAATAGACAGGATTTGATCTCTGAGGTGAAGAATGCAGCTTTGGAATGTGCAGTCTTGCTGATTGGTGAATATGAGGAAGGTTTGGAGAAAGTAGGGAAGTACTTGGCTCGCTACTTAGCTTTAAGACAAAGAAGGTTACTCCTTGCTGCAAAAGTCCAGTCAGAGGAACGGTCAATGAACGATCTTGATGATGATACTGCATCAGAAGCTAGCAGTAATTTCAGTGGAATGAGTGCTTACACCACTGGGACTAGGAACAGCTCTGCCACTTCCATGAGATCAAGTGCAGCTAGCAGGGCAAGAGATGCCAGGCGTCAGAGAAAGAAAGGAAAAATCCGTGCTGGCAGTCCTGGTGAGGAGATCGCTCTTGTAGATCACTTGAAGGGGATGCCTCCAACAAGTGAAGCACTCCAGGAGCTAAAATCTTTGTTGCATACGCTTGTGATGCTTGGCGAGGTTGAAACTGCAAGAAAGCTGCAGAAGGCTGGAGAGAACTTTCAACTGTCGCATATGGCAGCAGTCAAACTAGCCGAAGATACAGTATCCACTGATGGCATAGATGAGCACACACAGACTTTGGAGCATTATACACAAAGTATTAGAGATGTAGTGCAAAACTCCGAGGCTTTCTTTTGGCGTTGTAAAGTATTTCTTTCTCCTTGA

Protein Analysis

3082

Amino Acids

342.71

Weight (kDa)

5.48

Isoelectric Point (pI)

44.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3H1 PF10650 951 - 971 2.7e-09 Putative zinc-finger domain
Beta-prop_ELP1_1st PF04762 1763 - 1922 2.7e-27 ELP1 first N-terminal beta-propeller
Beta-prop_ELP1_1st PF04762 1939 - 2091 2.7e-44 ELP1 first N-terminal beta-propeller
Beta-prop_ELP1_2nd PF23797 2125 - 2441 7.3e-49 ELP1 N-terminal second beta-propeller
A-sol_ELP1 PF23925 2466 - 2687 2.5e-47 ELP1 alpha-solenoid
TPR_ELP1 PF23878 2696 - 2857 9.1e-25 ELP1 TPR domain
HB_ELP1 PF23936 2869 - 3026 1.5e-14 ELP1 three-helix bundle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 5154, 7292
AarI CACCTGC 1 cut(s) 7507
Acc36I ACCTGC 4 cut(s) 322, 5476, 7507, 7543
AccB1I GGYRCC 1 cut(s) 7310
AccB7I CCANNNNNTGG 2 cut(s) 1367, 5826
AccI GTMKAC 4 cut(s) 2169, 2261, 2763, 5637
AccII CGCG 4 cut(s) 41, 1282, 5483, 5832
AclI AACGTT 3 cut(s) 1530, 2987, 4696
AcoI YGGCCR 6 cut(s) 1354, 2846, 3226, 4247, 6310, 7728
AcuI CTGAAG 6 cut(s) 429, 779, 800, 4992, 7932, 8201
AcvI CACGTG 2 cut(s) 341, 3413
AcyI GRCGYC 4 cut(s) 331, 5634, 7471, 8899
AdeI CACNNNGTG 1 cut(s) 6728
AfeI AGCGCT 1 cut(s) 1942
AflII CTTAAG 6 cut(s) 743, 785, 3070, 4078, 5888, 5897
AflIII ACRYGT 4 cut(s) 1135, 1700, 3504, 6293
AgeI ACCGGT 1 cut(s) 1049
AhdI GACNNNNNGTC 2 cut(s) 4896, 7030
AjiI CACGTC 2 cut(s) 1863, 7081
AjuI GAANNNNNNNTTGG 2 cut(s) 8609, 8641
AleI CACNNNNGTG 2 cut(s) 5246, 7083
AloI GAACNNNNNNTCC 4 cut(s) 3491, 3523, 6118, 6150
Alw21I GWGCWC 6 cut(s) 69, 99, 2695, 3418, 5355, 9153
AlwNI CAGNNNCTG 2 cut(s) 1367, 5713
Ama87I CYCGRG 7 cut(s) 158, 349, 462, 654, 4562, 6457, 6954
Aor51HI AGCGCT 1 cut(s) 1942
ApaI GGGCCC 3 cut(s) 165, 357, 4189
AseI ATTAAT 1 cut(s) 6087
AsiGI ACCGGT 1 cut(s) 1049
Asp700I GAANNNNTTC 5 cut(s) 188, 2139, 2497, 3146, 8040
AsuC2I CCSGG 6 cut(s) 159, 160, 4263, 5698, 6470, 8395
AsuII TTCGAA 2 cut(s) 2127, 4381
AsuNHI GCTAGC 3 cut(s) 5030, 8795, 8876
AvaI CYCGRG 7 cut(s) 158, 349, 462, 654, 4562, 6457, 6954
AvaII GGWCC 9 cut(s) 1885, 2825, 3238, 4859, 5571, 6655, 7405, 7432, 8026
BaeGI GKGCMC 5 cut(s) 165, 346, 357, 4189, 5274
BaeI ACNNNNGTAYC 2 cut(s) 1847, 1880
BalI TGGCCA 3 cut(s) 2848, 4249, 7730
BamHI GGATCC 1 cut(s) 1370
BanI GGYRCC 1 cut(s) 7310
BauI CACGAG 2 cut(s) 2694, 7368
BbrPI CACGTG 2 cut(s) 341, 3413
BbsI GAAGAC 1 cut(s) 6741
Bbv12I GWGCWC 6 cut(s) 69, 99, 2695, 3418, 5355, 9153
BceAI ACGGC 6 cut(s) 28, 3241, 4329, 5656, 6137, 6332
BciVI GTATCC 1 cut(s) 9139
BclI TGATCA 4 cut(s) 3532, 4537, 7141, 7149
BcnI CCSGG 6 cut(s) 159, 160, 4263, 5698, 6470, 8395
BfoI RGCGCY 4 cut(s) 23, 1944, 5286, 5561
BfrI CTTAAG 6 cut(s) 743, 785, 3070, 4078, 5888, 5897
BfuAI ACCTGC 4 cut(s) 322, 5476, 7507, 7543
BfuI GTATCC 1 cut(s) 9139
BglII AGATCT 2 cut(s) 6139, 6574
BlpI GCTNAGC 1 cut(s) 4555
BmcAI AGTACT 3 cut(s) 3076, 3900, 8687
Bme18I GGWCC 9 cut(s) 1885, 2825, 3238, 4859, 5571, 6655, 7405, 7432, 8026
BmeRI GACNNNNNGTC 2 cut(s) 4896, 7030
BmeT110I CYCGRG 7 cut(s) 158, 349, 462, 654, 4562, 6457, 6954
BmgBI CACGTC 2 cut(s) 1863, 7081
BmrI ACTGGG 6 cut(s) 1764, 5712, 8219, 8417, 8563, 8841
BmtI GCTAGC 3 cut(s) 5034, 8799, 8880
BmuI ACTGGG 6 cut(s) 1764, 5712, 8219, 8417, 8563, 8841
BoxI GACNNNNGTC 1 cut(s) 2676
BpiI GAAGAC 1 cut(s) 6741
BplI GAGNNNNNCTC 2 cut(s) 2677, 2709
BpmI CTGGAG 8 cut(s) 1619, 5312, 5429, 6814, 8311, 8519, 8981, 9093
Bpu10I CCTNAGC 2 cut(s) 837, 6808
Bpu1102I GCTNAGC 1 cut(s) 4555
Bpu14I TTCGAA 2 cut(s) 2127, 4381
BpuMI CCSGG 6 cut(s) 159, 160, 4263, 5698, 6470, 8395
BsaAI YACGTR 3 cut(s) 341, 1701, 3413
BsaBI GATNNNNATC 1 cut(s) 4041
BsaHI GRCGYC 4 cut(s) 331, 5634, 7471, 8899
BsaI GGTCTC 2 cut(s) 5320, 6845
BsaWI WCCGGW 4 cut(s) 875, 1049, 3301, 7759
BsaXI ACNNNNNCTCC 8 cut(s) 139, 169, 2458, 2488, 3112, 3142, 7014, 7044
Bse118I RCCGGY 2 cut(s) 1049, 1882
Bse3DI GCAATG 6 cut(s) 292, 1029, 3794, 4603, 5820, 7429
Bse8I GATNNNNATC 1 cut(s) 4041
BseJI GATNNNNATC 1 cut(s) 4041
BseMI GCAATG 6 cut(s) 292, 1029, 3794, 4603, 5820, 7429
BseRI GAGGAG 4 cut(s) 2466, 5395, 5428, 8957
BseSI GKGCMC 5 cut(s) 165, 346, 357, 4189, 5274
BseX3I CGGCCG 1 cut(s) 3226
BseYI CCCAGC 2 cut(s) 795, 1018
BsgI GTGCAG 8 cut(s) 830, 948, 2762, 5736, 7061, 7803, 8655, 8892
Bsh1236I CGCG 4 cut(s) 41, 1282, 5483, 5832
Bsh1285I CGRYCG 1 cut(s) 3229
BshNI GGYRCC 1 cut(s) 7310
BshTI ACCGGT 1 cut(s) 1049
BsiEI CGRYCG 1 cut(s) 3229
BsiHKAI GWGCWC 6 cut(s) 69, 99, 2695, 3418, 5355, 9153
BsiHKCI CYCGRG 7 cut(s) 158, 349, 462, 654, 4562, 6457, 6954
BsmBI CGTCTC 3 cut(s) 2407, 7371, 7610
Bso31I GGTCTC 2 cut(s) 5320, 6845
BsoBI CYCGRG 7 cut(s) 158, 349, 462, 654, 4562, 6457, 6954
Bsp119I TTCGAA 2 cut(s) 2127, 4381
Bsp120I GGGCCC 3 cut(s) 161, 353, 4185
Bsp1720I GCTNAGC 1 cut(s) 4555
Bsp19I CCATGG 3 cut(s) 196, 2757, 6685
BspFNI CGCG 4 cut(s) 41, 1282, 5483, 5832
BspHI TCATGA 2 cut(s) 3829, 8437
BspMAI CTGCAG 9 cut(s) 3906, 4458, 5104, 6288, 7112, 7540, 8112, 8149, 9066
BspMI ACCTGC 4 cut(s) 322, 5476, 7507, 7543
BspOI GCTAGC 3 cut(s) 5034, 8799, 8880
BspQI GCTCTTC 4 cut(s) 275, 1686, 3402, 5343
BspT104I TTCGAA 2 cut(s) 2127, 4381
BspT107I GGYRCC 1 cut(s) 7310
BspTI CTTAAG 6 cut(s) 743, 785, 3070, 4078, 5888, 5897
BspTNI GGTCTC 2 cut(s) 5320, 6845
BsrDI GCAATG 6 cut(s) 292, 1029, 3794, 4603, 5820, 7429
BsrFI RCCGGY 2 cut(s) 1049, 1882
BssAI RCCGGY 2 cut(s) 1049, 1882
BssNI GRCGYC 4 cut(s) 331, 5634, 7471, 8899
BssSI CACGAG 2 cut(s) 2694, 7368
BssT1I CCWWGG 7 cut(s) 196, 2757, 2897, 6685, 6739, 6998, 7686
Bst2BI CACGAG 2 cut(s) 2694, 7368
BstACI GRCGYC 4 cut(s) 331, 5634, 7471, 8899
BstAFI CTTAAG 6 cut(s) 743, 785, 3070, 4078, 5888, 5897
BstAPI GCANNNNNTGC 3 cut(s) 7107, 7183, 8891
BstBAI YACGTR 3 cut(s) 341, 1701, 3413
BstBI TTCGAA 2 cut(s) 2127, 4381
BstDSI CCRYGG 5 cut(s) 39, 196, 604, 2757, 6685
BstEII GGTNACC 3 cut(s) 1418, 2567, 3595
BstENI CCTNNNNNAGG 1 cut(s) 3338
BstFNI CGCG 4 cut(s) 41, 1282, 5483, 5832
BstH2I RGCGCY 4 cut(s) 23, 1944, 5286, 5561
BstMCI CGRYCG 1 cut(s) 3229
BstPAI GACNNNNGTC 1 cut(s) 2676
BstPI GGTNACC 3 cut(s) 1418, 2567, 3595
BstSLI GKGCMC 5 cut(s) 165, 346, 357, 4189, 5274
BstUI CGCG 4 cut(s) 41, 1282, 5483, 5832
BstV2I GAAGAC 1 cut(s) 6741
BstX2I RGATCY 7 cut(s) 650, 1120, 1370, 1947, 2484, 6139, 6574
BstXI CCANNNNNNTGG 1 cut(s) 1214
BstYI RGATCY 7 cut(s) 650, 1120, 1370, 1947, 2484, 6139, 6574
BstZI CGGCCG 1 cut(s) 3226
BsuI GTATCC 1 cut(s) 9139
BtgI CCRYGG 5 cut(s) 39, 196, 604, 2757, 6685
BtrI CACGTC 2 cut(s) 1863, 7081
BtsI GCAGTG 5 cut(s) 2008, 2340, 6281, 7905, 8287
BveI ACCTGC 4 cut(s) 322, 5476, 7507, 7543
CaiI CAGNNNCTG 2 cut(s) 1367, 5713
CciI TCATGA 2 cut(s) 3829, 8437
Cfr10I RCCGGY 2 cut(s) 1049, 1882
Cfr42I CCGCGG 1 cut(s) 42
Cfr9I CCCGGG 1 cut(s) 158
CseI GACGC 9 cut(s) 320, 1076, 1288, 2021, 5623, 6594, 7460, 7627, 8888
CspAI ACCGGT 1 cut(s) 1049
DraIII CACNNNGTG 1 cut(s) 6728
DriI GACNNNNNGTC 2 cut(s) 4896, 7030
EaeI YGGCCR 6 cut(s) 1354, 2846, 3226, 4247, 6310, 7728
EagI CGGCCG 1 cut(s) 3226
Eam1105I GACNNNNNGTC 2 cut(s) 4896, 7030
EciI GGCGGA 4 cut(s) 59, 5064, 5356, 5398
Ecl136II GAGCTC 4 cut(s) 67, 97, 2693, 5353
EclXI CGGCCG 1 cut(s) 3226
Eco130I CCWWGG 7 cut(s) 196, 2757, 2897, 6685, 6739, 6998, 7686
Eco147I AGGCCT 1 cut(s) 5583
Eco31I GGTCTC 2 cut(s) 5320, 6845
Eco32I GATATC 1 cut(s) 4502
Eco47I GGWCC 9 cut(s) 1885, 2825, 3238, 4859, 5571, 6655, 7405, 7432, 8026
Eco47III AGCGCT 1 cut(s) 1942
Eco52I CGGCCG 1 cut(s) 3226
Eco53kI GAGCTC 4 cut(s) 67, 97, 2693, 5353
Eco57I CTGAAG 6 cut(s) 429, 779, 800, 4992, 7932, 8201
Eco72I CACGTG 2 cut(s) 341, 3413
Eco88I CYCGRG 7 cut(s) 158, 349, 462, 654, 4562, 6457, 6954
Eco91I GGTNACC 3 cut(s) 1418, 2567, 3595
EcoICRI GAGCTC 4 cut(s) 67, 97, 2693, 5353
EcoNI CCTNNNNNAGG 1 cut(s) 3338
EcoO109I RGGNCCY 6 cut(s) 353, 841, 3238, 4185, 8026, 8125
EcoO65I GGTNACC 3 cut(s) 1418, 2567, 3595
EcoRI GAATTC 6 cut(s) 2521, 4266, 6340, 6493, 8014, 8036
EcoRV GATATC 1 cut(s) 4502
EcoT14I CCWWGG 7 cut(s) 196, 2757, 2897, 6685, 6739, 6998, 7686
EcoT22I ATGCAT 5 cut(s) 3713, 4277, 4624, 7388, 7429
ErhI CCWWGG 7 cut(s) 196, 2757, 2897, 6685, 6739, 6998, 7686
Esp3I CGTCTC 3 cut(s) 2407, 7371, 7610
FauI CCCGC 3 cut(s) 202, 5488, 6562
FauNDI CATATG 5 cut(s) 3100, 5786, 6335, 7298, 9096
FbaI TGATCA 4 cut(s) 3532, 4537, 7141, 7149
FblI GTMKAC 4 cut(s) 2169, 2261, 2763, 5637
GsaI CCCAGC 2 cut(s) 799, 1022
GsuI CTGGAG 8 cut(s) 1619, 5312, 5429, 6814, 8311, 8519, 8981, 9093
HaeII RGCGCY 4 cut(s) 23, 1944, 5286, 5561
HgaI GACGC 9 cut(s) 320, 1076, 1288, 2021, 5623, 6594, 7460, 7627, 8888
Hin1I GRCGYC 4 cut(s) 331, 5634, 7471, 8899
HincII GTYRAC 6 cut(s) 1936, 2681, 3523, 5638, 6291, 7501
HindII GTYRAC 6 cut(s) 1936, 2681, 3523, 5638, 6291, 7501
HindIII AAGCTT 7 cut(s) 376, 435, 782, 1656, 2250, 3309, 8562
HpaI GTTAAC 2 cut(s) 1936, 6291
Hpy99I CGWCG 5 cut(s) 14, 5630, 5639, 5642, 6251
Hsp92I GRCGYC 4 cut(s) 331, 5634, 7471, 8899
Ksp22I TGATCA 4 cut(s) 3532, 4537, 7141, 7149
KspAI GTTAAC 2 cut(s) 1936, 6291
KspI CCGCGG 1 cut(s) 42
LguI GCTCTTC 4 cut(s) 275, 1686, 3402, 5343
MfeI CAATTG 1 cut(s) 1040
MflI RGATCY 7 cut(s) 650, 1120, 1370, 1947, 2484, 6139, 6574
MlsI TGGCCA 3 cut(s) 2848, 4249, 7730
MluNI TGGCCA 3 cut(s) 2848, 4249, 7730
Mox20I TGGCCA 3 cut(s) 2848, 4249, 7730
Mph1103I ATGCAT 5 cut(s) 3713, 4277, 4624, 7388, 7429
MroXI GAANNNNTTC 5 cut(s) 188, 2139, 2497, 3146, 8040
MscI TGGCCA 3 cut(s) 2848, 4249, 7730
Msp20I TGGCCA 3 cut(s) 2848, 4249, 7730
MspA1I CMGCKG 7 cut(s) 41, 939, 4786, 6002, 7349, 7535, 8221
MspCI CTTAAG 6 cut(s) 743, 785, 3070, 4078, 5888, 5897
MteI GCGCNGCGC 1 cut(s) 18
MunI CAATTG 1 cut(s) 1040
MvnI CGCG 4 cut(s) 41, 1282, 5483, 5832
NciI CCSGG 6 cut(s) 159, 160, 4263, 5698, 6470, 8395
NcoI CCATGG 3 cut(s) 196, 2757, 6685
NdeI CATATG 5 cut(s) 3100, 5786, 6335, 7298, 9096
NheI GCTAGC 3 cut(s) 5030, 8795, 8876
NmeAIII GCCGAG 1 cut(s) 5539
NmuCI GTSAC 9 cut(s) 1418, 2567, 3408, 3584, 4073, 5488, 5851, 6397, 7808
NsiI ATGCAT 5 cut(s) 3713, 4277, 4624, 7388, 7429
NspV TTCGAA 2 cut(s) 2127, 4381
OliI CACNNNNGTG 2 cut(s) 5246, 7083
PaeI GCATGC 2 cut(s) 3662, 4622
PaeR7I CTCGAG 4 cut(s) 462, 654, 4562, 6457
PagI TCATGA 2 cut(s) 3829, 8437
PaqCI CACCTGC 1 cut(s) 7507
PceI AGGCCT 1 cut(s) 5583
PciI ACATGT 3 cut(s) 1135, 3504, 6293
PciSI GCTCTTC 4 cut(s) 275, 1686, 3402, 5343
PcsI WCGNNNNNNNCGW 4 cut(s) 3231, 5631, 5634, 5643
PdmI GAANNNNTTC 5 cut(s) 188, 2139, 2497, 3146, 8040
PflFI GACNNNGTC 1 cut(s) 6179
PflMI CCANNNNNTGG 2 cut(s) 1367, 5826
PfoI TCCNGGA 2 cut(s) 6468, 8997
PinAI ACCGGT 1 cut(s) 1049
PmaCI CACGTG 2 cut(s) 341, 3413
PmlI CACGTG 2 cut(s) 341, 3413
Ppu21I YACGTR 3 cut(s) 341, 1701, 3413
PpuMI RGGWCCY 2 cut(s) 3238, 8026
PscI ACATGT 3 cut(s) 1135, 3504, 6293
PshAI GACNNNNGTC 1 cut(s) 2676
PshBI ATTAAT 1 cut(s) 6087
PsiI TTATAA 2 cut(s) 5154, 7292
Psp124BI GAGCTC 4 cut(s) 69, 99, 2695, 5355
Psp1406I AACGTT 3 cut(s) 1530, 2987, 4696
Psp5II RGGWCCY 2 cut(s) 3238, 8026
PspCI CACGTG 2 cut(s) 341, 3413
PspEI GGTNACC 3 cut(s) 1418, 2567, 3595
PspFI CCCAGC 2 cut(s) 795, 1018
PspOMI GGGCCC 3 cut(s) 161, 353, 4185
PspPPI RGGWCCY 2 cut(s) 3238, 8026
PspXI VCTCGAGB 1 cut(s) 462
PsrI GAACNNNNNNTAC 2 cut(s) 4824, 4856
PstI CTGCAG 9 cut(s) 3906, 4458, 5104, 6288, 7112, 7540, 8112, 8149, 9066
PstNI CAGNNNCTG 2 cut(s) 1367, 5713
PsuI RGATCY 7 cut(s) 650, 1120, 1370, 1947, 2484, 6139, 6574
PsyI GACNNNGTC 1 cut(s) 6179
PvuII CAGCTG 4 cut(s) 4786, 6002, 7535, 8221
SacI GAGCTC 4 cut(s) 69, 99, 2695, 5355
SacII CCGCGG 1 cut(s) 42
SalI GTCGAC 1 cut(s) 5636
SapI GCTCTTC 4 cut(s) 275, 1686, 3402, 5343
ScaI AGTACT 3 cut(s) 3076, 3900, 8687
Sfr274I CTCGAG 4 cut(s) 462, 654, 4562, 6457
Sfr303I CCGCGG 1 cut(s) 42
SfuI TTCGAA 2 cut(s) 2127, 4381
SgrBI CCGCGG 1 cut(s) 42
SgrDI CGTCGACG 1 cut(s) 5636
SinI GGWCC 9 cut(s) 1885, 2825, 3238, 4859, 5571, 6655, 7405, 7432, 8026
SlaI CTCGAG 4 cut(s) 462, 654, 4562, 6457
SmaI CCCGGG 1 cut(s) 160
SphI GCATGC 2 cut(s) 3662, 4622
SseBI AGGCCT 1 cut(s) 5583
SspI AATATT 5 cut(s) 2707, 3775, 4595, 5799, 5809
SstI GAGCTC 4 cut(s) 69, 99, 2695, 5355
StuI AGGCCT 1 cut(s) 5583
StyI CCWWGG 7 cut(s) 196, 2757, 2897, 6685, 6739, 6998, 7686
TaqII GACCGA 1 cut(s) 3603
TatI WGTACW 5 cut(s) 867, 2018, 3074, 3898, 8685
TseFI GTSAC 9 cut(s) 1418, 2567, 3408, 3584, 4073, 5488, 5851, 6397, 7808
Tsp45I GTSAC 9 cut(s) 1418, 2567, 3408, 3584, 4073, 5488, 5851, 6397, 7808
TspGWI ACGGA 8 cut(s) 593, 1736, 3133, 3427, 5289, 6264, 7844, 8912
TspMI CCCGGG 1 cut(s) 158
Tth111I GACNNNGTC 1 cut(s) 6179
Van91I CCANNNNNTGG 2 cut(s) 1367, 5826
Vha464I CTTAAG 6 cut(s) 743, 785, 3070, 4078, 5888, 5897
VpaK11BI GGWCC 9 cut(s) 1885, 2825, 3238, 4859, 5571, 6655, 7405, 7432, 8026
VspI ATTAAT 1 cut(s) 6087
XagI CCTNNNNNAGG 1 cut(s) 3338
XbaI TCTAGA 4 cut(s) 617, 6577, 6844, 7378
XcmI CCANNNNNNNNNTGG 4 cut(s) 1364, 1970, 5085, 8494
XhoI CTCGAG 4 cut(s) 462, 654, 4562, 6457
XmaI CCCGGG 1 cut(s) 158
XmiI GTMKAC 4 cut(s) 2169, 2261, 2763, 5637
XmnI GAANNNNTTC 5 cut(s) 188, 2139, 2497, 3146, 8040
ZrmI AGTACT 3 cut(s) 3076, 3900, 8687
Zsp2I ATGCAT 5 cut(s) 3713, 4277, 4624, 7388, 7429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.