Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001152

Physical Location & Seq

Genomic Coordinates Forward (+)

82956133 .. 82958122

Gene Structure 1990 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G047880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGTGTTTTTTTCCAGTCATAACTGAGGCATTGTATGAACTTAATCTTATGACTTCAGAGTTGGGCCAACTAGCCATGTCCTCTGCAATGCTTAATGATGCCGCATTATGGTTCCTCATTATACTTAATGTGATTGTTTCAACCAAAGGATATCCAGTATTGCTTTCCACGTTGGGGTTGTTACTCTTCACAATCTATATCATACGCCCACTTATGCAGTTATGCTTAAAGGAAATCTATATAGTTCCGATACTTCTTGGGGTTCTAGTCATGGCCTTTATCACCGACGCCCTAGGCCAAGTATATCAATTGGCTCCTTTTCTTCTAGGTTTAATCATACCAGATGGACCACCACTTGGTGCAACATTAACAGCCAAGACCGAATTCTTGGTCTCAGAACTTCTTCTGCCAGTGTTCTTTTTTCTTATTGGCAACAGCGTAAATGTGTTTTTGATTGACGATTGGACTAAGTTTGCCAAACTTCAGATTATTATTCTTTACGTGGCTGGCTTGTGCTGCAAAATTAGCTTGAAAAATAGTCTCATCCTCAGCATGATCATGAGTATGAAGGGTATAATAGAGCTTATGATTTATCATAAATGGATGACCATGAAGTTTATAGATGAACAATTTTTCACTCAGCTGATCTTGTCTGCACTAGTGATCACAATGACTGTAACACCAATTGTACAATTCTCATACACTCCTCAAAAACAACTCCGAAGATCAACCAAAGATTCACAGGTCAGAAACATCCAATCACAACGAAATAACCTCGGAACTTTTCAGATTCTTTGTTGTGTTCACAATGAAGAAAGTGCCTGCAGCATCATCACCTTCTTAGACGCTTCAAATCCAACAGAAGCAAGCCCCATATGCATGTACATTGTCCACGTAGTTGATTTAATTGGCAGTTCTGCACCACAATTGACACCTTACAAGAAGAAAACGAAATTTAGGCGGTTGGATTCACCTACACATCAAATGATGCGGGCCTTCGAGAATTACTCAGAAAACTCAAGAGGACCAGTGATAATTCATCCATATACTATGGTGGCTCCTTATAAATCCATGCACGAGACCATTTTTCGTCTAGCTCGGGAAAAGCTCGCTCCTCTGATTATCATCTCATTCCCTGATAACCAACACCAGTCTATTGTTGGCACTGCTCCCACTAGCCCCATACGCCAATTGAACCTTAATTTACAACAATTTTCTCAGTGTACAATTGGAATACTAGTTGACAAAGGCTTGCCTTGTCGACCAAGTGTCTCCAACTTCTCTTACATTGTGGCCGTATTTTTCATTGGTGGACCAGATGACCGTGAGACATTAGCATATGCATCACGCATGGCAGACAACCCTGACGTGGGCATCACAGTGTTCAGGATTCTCGTGCGTATCAAGAAGATAGACAGTTCTGAGGAAGAGGAGAGAGAGTTTAAGCTAGACGAGTCACTGTTGGATGAGTTTAAGCTAAGAAACACCGGGAATGATAGGTTGAATTGGCGTGATATTGAGGTGGATGATGGTGTTGAGACTGTTGAGGCTGTGACGGCTATTAAAAATTTTCAGGGTGAGTACGACCCAGTGATGGTGGGGCGGCGACATTTGGATGTGTCGTTGAGGGATGAAGAAATGGCAGACTTATTGCACAATCCAGAGCTGGGAGTGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

559

Amino Acids

63.13

Weight (kDa)

5.6

Isoelectric Point (pI)

43.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	6 - 230	4.9e-13	Sodium/hydrogen exchanger, transmembrane
CHX17_C	PF23259	430 - 535	2.4e-07	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001152)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43690 FvH4_7g25211 FvH4_7g25250 FvH4_7g25290 FvH4_7g25310
malus_domestica	MD01G1158700.v1.1 MD01G1158800.v1.1 MD07G1227200.v1.1 MD07G1227600.v1.1
prunus_persica	Prupe.2G257000_v2.0.a1 Prupe.2G257100_v2.0.a1
pyrus_communis	pycom01g17540
rosa_chinensis	RchiOBHm_Chr1g0371191 RchiOBHm_Chr1g0371201 RchiOBHm_Chr1g0371211
rosa_laevigata	RLG00000026978 RLG00000026979 RLG00000026980 RLG00000026981 RLG00000026983 RLG00000036771
rosa_multiflora	Rmu_co8222838.1_g000001 Rmu_sc0000631.1_g000023 Rmu_sc0001018.1_g000042 Rmu_sc0001018.1_g000044 Rmu_sc0001018.1_g000049 Rmu_sc0001018.1_g000050 Rmu_sc0001018.1_g000051 Rmu_sc0008081.1_g000003
rosa_roxburghii	Rroxscaffold_4G00285900 Rroxscaffold_4G00285910
rosa_rugosa	Rorug01G0361700 Rorug01G0361900 Rorug01G0362000 Rorug01G0362200 Rorug05G0460600
rosa_samantha	Rh1AG372000 Rh1AG372200 Rh1AG372300 Rh1BG335100 Rh1BG335500 Rh1BG335700 Rh1BG335800 Rh1CG348600 Rh1CG349000 Rh1CG349100 Rh1CG349200 Rh1DG366500 Rh1DG366900 Rh1DG367000 Rh5BG537300 Rh5CG560800 Rh5DG548900
rosa_wichuraiana	Rw1G032720 Rw1G032730 Rw1G032740 Rw5G047750 Rw5G047880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1065
AccB7I	CCANNNNNTGG	1 cut(s)	356
AccI	GTMKAC	1 cut(s)	1261
AciI	CCGC	4 cut(s)	102, 961, 991, 1603
AcoI	YGGCCR	1 cut(s)	1293
AcsI	RAATTY	3 cut(s)	383, 953, 1567
AcuI	CTGAAG	2 cut(s)	39, 467
AcyI	GRCGYC	1 cut(s)	288
AdeI	CACNNNGTG	1 cut(s)	359
AfaI	GTAC	4 cut(s)	690, 884, 1225, 1583
AfiI	CCNNNNNNNGG	7 cut(s)	108, 174, 356, 1369, 1370, 1594, 1667
AgsI	TTSAA	5 cut(s)	141, 532, 852, 1195, 1504
AhdI	GACNNNNNGTC	1 cut(s)	1268
AhlI	ACTAGT	2 cut(s)	658, 1237
AjiI	CACGTC	1 cut(s)	1369
AjuI	GAANNNNNNNTTGG	2 cut(s)	368, 400
AluBI	AGCT	8 cut(s)	528, 583, 643, 1097, 1108, 1447, 1477, 1666
AluI	AGCT	8 cut(s)	528, 583, 643, 1097, 1108, 1447, 1477, 1666
Alw26I	GTCTC	6 cut(s)	397, 545, 1073, 1276, 1322, 1532
Ama87I	CYCGRG	1 cut(s)	1098
AoxI	GGCC	5 cut(s)	64, 273, 295, 993, 1293
ApeKI	GCWGC	2 cut(s)	516, 825
ApoI	RAATTY	3 cut(s)	383, 953, 1567
ArsI	GACNNNNNNTTYG	2 cut(s)	375, 407
Asp700I	GAANNNNTTC	1 cut(s)	402
AspA2I	CCTAGG	1 cut(s)	292
AspS9I	GGNCC	5 cut(s)	64, 347, 993, 1025, 1313
AsuC2I	CCSGG	1 cut(s)	1489
AsuHPI	GGTGA	4 cut(s)	274, 826, 963, 1589
AvaI	CYCGRG	1 cut(s)	1098
AvaII	GGWCC	3 cut(s)	347, 1025, 1313
AvrII	CCTAGG	1 cut(s)	292
BauI	CACGAG	2 cut(s)	1076, 1394
BbvCI	CCTCAGC	1 cut(s)	548
BbvI	GCAGC	2 cut(s)	503, 837
BccI	CCATC	3 cut(s)	338, 1523, 1588
BceAI	ACGGC	2 cut(s)	1280, 1572
BclI	TGATCA	2 cut(s)	555, 663
BcnI	CCSGG	1 cut(s)	1489
BcoDI	GTCTC	6 cut(s)	397, 545, 1073, 1276, 1322, 1532
BcuI	ACTAGT	2 cut(s)	658, 1237
BfaI	CTAG	9 cut(s)	71, 266, 293, 326, 659, 1094, 1176, 1238, 1448
BfmI	CTRYAG	1 cut(s)	823
BisI	GCNGC	4 cut(s)	102, 517, 826, 1604
BlnI	CCTAGG	1 cut(s)	292
BlsI	GCNGC	4 cut(s)	103, 518, 827, 1605
Bme1390I	CCNGG	1 cut(s)	1489
Bme18I	GGWCC	3 cut(s)	347, 1025, 1313
BmeRI	GACNNNNNGTC	1 cut(s)	1268
BmeT110I	CYCGRG	1 cut(s)	1098
BmgBI	CACGTC	1 cut(s)	1369
BmgT120I	GGNCC	5 cut(s)	64, 347, 993, 1025, 1313
BmiI	GGNNCC	3 cut(s)	113, 315, 1059
BmrFI	CCNGG	1 cut(s)	1489
BmrI	ACTGGG	1 cut(s)	1583
BmsI	GCATC	5 cut(s)	88, 837, 978, 1352, 1383
BmuI	ACTGGG	1 cut(s)	1583
BplI	GAGNNNNNCTC	2 cut(s)	992, 1024
Bpu10I	CCTNAGC	1 cut(s)	548
BpuEI	CTTGAG	1 cut(s)	1003
BpuMI	CCSGG	1 cut(s)	1489
BsaAI	YACGTR	2 cut(s)	502, 895
BsaBI	GATNNNNATC	1 cut(s)	1124
BsaHI	GRCGYC	1 cut(s)	288
BsaI	GGTCTC	2 cut(s)	397, 1073
BsaJI	CCNNGG	2 cut(s)	292, 775
BsaXI	ACNNNNNCTCC	2 cut(s)	1424, 1454
Bsc4I	CCNNNNNNNGG	7 cut(s)	108, 174, 356, 1369, 1370, 1594, 1667
Bse1I	ACTGG	6 cut(s)	14, 155, 410, 1028, 1150, 1589
Bse3DI	GCAATG	1 cut(s)	93
Bse8I	GATNNNNATC	1 cut(s)	1124
BseDI	CCNNGG	2 cut(s)	292, 775
BseGI	GGATG	8 cut(s)	543, 609, 753, 1039, 1471, 1531, 1621, 1636
BseJI	GATNNNNATC	1 cut(s)	1124
BseLI	CCNNNNNNNGG	7 cut(s)	108, 174, 356, 1369, 1370, 1594, 1667
BseMI	GCAATG	1 cut(s)	93
BseMII	CTCAG	7 cut(s)	15, 408, 562, 653, 1023, 1232, 1413
BseNI	ACTGG	6 cut(s)	14, 155, 410, 1028, 1150, 1589
BseRI	GAGGAG	3 cut(s)	696, 1104, 1445
BseXI	GCAGC	2 cut(s)	503, 837
BseYI	CCCAGC	1 cut(s)	1666
BsgI	GTGCAG	2 cut(s)	639, 903
BshFI	GGCC	5 cut(s)	66, 275, 297, 995, 1295
BsiHKCI	CYCGRG	1 cut(s)	1098
BsiSI	CCGG	1 cut(s)	1488
BslI	CCNNNNNNNGG	7 cut(s)	108, 174, 356, 1369, 1370, 1594, 1667
BsmAI	GTCTC	6 cut(s)	397, 545, 1073, 1276, 1322, 1532
BsnI	GGCC	5 cut(s)	66, 275, 297, 995, 1295
Bso31I	GGTCTC	2 cut(s)	397, 1073
BsoBI	CYCGRG	1 cut(s)	1098
Bsp1407I	TGTACA	3 cut(s)	688, 882, 1223
Bsp143I	GATC	4 cut(s)	555, 645, 663, 725
BspACI	CCGC	4 cut(s)	102, 961, 991, 1603
BspANI	GGCC	5 cut(s)	66, 275, 297, 995, 1295
BspCNI	CTCAG	7 cut(s)	16, 407, 561, 652, 1022, 1231, 1414
BspHI	TCATGA	1 cut(s)	558
BspLI	GGNNCC	3 cut(s)	113, 315, 1059
BspMAI	CTGCAG	1 cut(s)	827
BspTNI	GGTCTC	2 cut(s)	397, 1073
BsrDI	GCAATG	1 cut(s)	93
BsrGI	TGTACA	3 cut(s)	688, 882, 1223
BsrI	ACTGG	6 cut(s)	14, 155, 410, 1028, 1150, 1589
BssECI	CCNNGG	2 cut(s)	292, 775
BssMI	GATC	4 cut(s)	555, 645, 663, 725
BssNI	GRCGYC	1 cut(s)	288
BssSI	CACGAG	2 cut(s)	1076, 1394
BssT1I	CCWWGG	1 cut(s)	292
Bst2BI	CACGAG	2 cut(s)	1076, 1394
Bst4CI	ACNGT	6 cut(s)	676, 1325, 1381, 1418, 1461, 1543
Bst6I	CTCTTC	2 cut(s)	191, 1422
BstACI	GRCGYC	1 cut(s)	288
BstAUI	TGTACA	3 cut(s)	688, 882, 1223
BstBAI	YACGTR	2 cut(s)	502, 895
BstC8I	GCNNGC	6 cut(s)	508, 823, 868, 993, 1110, 1253
BstF5I	GGATG	8 cut(s)	543, 609, 753, 1039, 1471, 1531, 1621, 1636
BstKTI	GATC	4 cut(s)	558, 648, 666, 728
BstMAI	GTCTC	6 cut(s)	397, 545, 1073, 1276, 1322, 1532
BstMBI	GATC	4 cut(s)	555, 645, 663, 725
BstMWI	GCNNNNNNNGC	5 cut(s)	516, 525, 876, 1185, 1556
BstNSI	RCATGY	1 cut(s)	883
BstSCI	CCNGG	1 cut(s)	1487
BstSFI	CTRYAG	1 cut(s)	823
BstV1I	GCAGC	2 cut(s)	503, 837
BsuRI	GGCC	5 cut(s)	66, 275, 297, 995, 1295
BtrI	CACGTC	1 cut(s)	1369
BtsCI	GGATG	8 cut(s)	543, 609, 753, 1039, 1471, 1531, 1621, 1636
BtsI	GCAGTG	1 cut(s)	1164
BtsIMutI	CAGTG	7 cut(s)	417, 1035, 1164, 1226, 1386, 1457, 1596
Cac8I	GCNNGC	6 cut(s)	508, 823, 868, 993, 1110, 1253
CciI	TCATGA	1 cut(s)	558
Cfr13I	GGNCC	5 cut(s)	64, 347, 993, 1025, 1313
CseI	GACGC	2 cut(s)	296, 854
Csp6I	GTAC	4 cut(s)	689, 883, 1224, 1582
CviAII	CATG	9 cut(s)	76, 271, 553, 559, 610, 880, 1072, 1351, 1677
CviQI	GTAC	4 cut(s)	689, 883, 1224, 1582
DpnI	GATC	4 cut(s)	557, 647, 665, 727
DpnII	GATC	4 cut(s)	555, 645, 663, 725
DraIII	CACNNNGTG	1 cut(s)	359
DriI	GACNNNNNGTC	1 cut(s)	1268
EaeI	YGGCCR	1 cut(s)	1293
Eam1104I	CTCTTC	2 cut(s)	191, 1422
Eam1105I	GACNNNNNGTC	1 cut(s)	1268
EarI	CTCTTC	2 cut(s)	191, 1422
Eco130I	CCWWGG	1 cut(s)	292
Eco31I	GGTCTC	2 cut(s)	397, 1073
Eco32I	GATATC	1 cut(s)	152
Eco47I	GGWCC	3 cut(s)	347, 1025, 1313
Eco57I	CTGAAG	2 cut(s)	39, 467
Eco88I	CYCGRG	1 cut(s)	1098
EcoRI	GAATTC	1 cut(s)	383
EcoRV	GATATC	1 cut(s)	152
EcoT14I	CCWWGG	1 cut(s)	292
EcoT22I	ATGCAT	2 cut(s)	881, 1345
ErhI	CCWWGG	1 cut(s)	292
FaeI	CATG	9 cut(s)	79, 274, 556, 562, 613, 883, 1075, 1354, 1680
FatI	CATG	9 cut(s)	75, 270, 552, 558, 609, 879, 1071, 1350, 1676
FauI	CCCGC	1 cut(s)	984
FauNDI	CATATG	2 cut(s)	875, 1339
FbaI	TGATCA	2 cut(s)	555, 663
FblI	GTMKAC	1 cut(s)	1261
Fnu4HI	GCNGC	4 cut(s)	102, 517, 826, 1604
FokI	GGATG	8 cut(s)	530, 616, 740, 1026, 1478, 1538, 1628, 1643
Fsp4HI	GCNGC	4 cut(s)	102, 517, 826, 1604
FspBI	CTAG	9 cut(s)	71, 266, 293, 326, 659, 1094, 1176, 1238, 1448
GluI	GCNGC	4 cut(s)	102, 517, 826, 1604
GsaI	CCCAGC	1 cut(s)	1670
HaeIII	GGCC	5 cut(s)	66, 275, 297, 995, 1295
HapII	CCGG	1 cut(s)	1488
HgaI	GACGC	2 cut(s)	296, 854
Hin1I	GRCGYC	1 cut(s)	288
Hin1II	CATG	9 cut(s)	79, 274, 556, 562, 613, 883, 1075, 1354, 1680
HincII	GTYRAC	2 cut(s)	1243, 1262
HindII	GTYRAC	2 cut(s)	1243, 1262
HinfI	GANTC	5 cut(s)	737, 790, 968, 1390, 1454
HpaII	CCGG	1 cut(s)	1488
HphI	GGTGA	4 cut(s)	274, 826, 963, 1589
Hpy166II	GTNNAC	6 cut(s)	805, 892, 1224, 1243, 1262, 1313
Hpy188III	TCNNGA	7 cut(s)	559, 1000, 1020, 1100, 1387, 1405, 1661
Hpy8I	GTNNAC	6 cut(s)	805, 892, 1224, 1243, 1262, 1313
Hpy99I	CGWCG	1 cut(s)	290
HpyAV	CCTTC	3 cut(s)	562, 847, 1006
HpyCH4III	ACNGT	6 cut(s)	676, 1325, 1381, 1418, 1461, 1543
HpyCH4IV	ACGT	4 cut(s)	170, 501, 894, 1368
HpyF10VI	GCNNNNNNNGC	5 cut(s)	516, 525, 876, 1185, 1556
HpySE526I	ACGT	4 cut(s)	170, 501, 894, 1368
Hsp92I	GRCGYC	1 cut(s)	288
Hsp92II	CATG	9 cut(s)	79, 274, 556, 562, 613, 883, 1075, 1354, 1680
Ksp22I	TGATCA	2 cut(s)	555, 663
Kzo9I	GATC	4 cut(s)	555, 645, 663, 725
LmnI	GCTCC	4 cut(s)	319, 1063, 1117, 1174
Lsp1109I	GCAGC	2 cut(s)	503, 837
LweI	GCATC	5 cut(s)	88, 837, 978, 1352, 1383
MaeI	CTAG	9 cut(s)	71, 266, 293, 326, 659, 1094, 1176, 1238, 1448
MaeII	ACGT	4 cut(s)	170, 501, 894, 1368
MaeIII	GTNAC	5 cut(s)	180, 676, 1455, 1552, 1672
MalI	GATC	4 cut(s)	557, 647, 665, 727
MboI	GATC	4 cut(s)	555, 645, 663, 725
MboII	GAAGA	9 cut(s)	178, 314, 395, 735, 824, 955, 1420, 1439, 1646
MfeI	CAATTG	5 cut(s)	308, 684, 926, 1190, 1227
MlyI	GAGTC	1 cut(s)	1463
MmeI	TCCRAC	4 cut(s)	881, 945, 1299, 1443
Mph1103I	ATGCAT	2 cut(s)	881, 1345
MroXI	GAANNNNTTC	1 cut(s)	402
MslI	CAYNNNNRTG	5 cut(s)	557, 563, 878, 1379, 1614
MspA1I	CMGCKG	1 cut(s)	643
MspI	CCGG	1 cut(s)	1488
MspR9I	CCNGG	1 cut(s)	1489
MunI	CAATTG	5 cut(s)	308, 684, 926, 1190, 1227
MwoI	GCNNNNNNNGC	5 cut(s)	516, 525, 876, 1185, 1556
NciI	CCSGG	1 cut(s)	1489
NdeI	CATATG	2 cut(s)	875, 1339
NdeII	GATC	4 cut(s)	555, 645, 663, 725
NlaIII	CATG	9 cut(s)	79, 274, 556, 562, 613, 883, 1075, 1354, 1680
NlaIV	GGNNCC	3 cut(s)	113, 315, 1059
NmuCI	GTSAC	3 cut(s)	1455, 1552, 1672
NsiI	ATGCAT	2 cut(s)	881, 1345
NspI	RCATGY	1 cut(s)	883
PagI	TCATGA	1 cut(s)	558
PdmI	GAANNNNTTC	1 cut(s)	402
PfeI	GAWTC	4 cut(s)	737, 790, 968, 1390
PflMI	CCANNNNNTGG	1 cut(s)	356
PkrI	GCNGC	4 cut(s)	103, 518, 827, 1605
PleI	GAGTC	1 cut(s)	1462
PpsI	GAGTC	1 cut(s)	1462
Ppu21I	YACGTR	2 cut(s)	502, 895
PsiI	TTATAA	1 cut(s)	1065
PspFI	CCCAGC	1 cut(s)	1666
PspN4I	GGNNCC	3 cut(s)	113, 315, 1059
PspPI	GGNCC	5 cut(s)	64, 347, 993, 1025, 1313
PstI	CTGCAG	1 cut(s)	827
PvuII	CAGCTG	1 cut(s)	643
RsaI	GTAC	4 cut(s)	690, 884, 1225, 1583
RsaNI	GTAC	4 cut(s)	689, 883, 1224, 1582
RseI	CAYNNNNRTG	5 cut(s)	557, 563, 878, 1379, 1614
SalI	GTCGAC	1 cut(s)	1260
SatI	GCNGC	4 cut(s)	102, 517, 826, 1604
Sau3AI	GATC	4 cut(s)	555, 645, 663, 725
Sau96I	GGNCC	5 cut(s)	64, 347, 993, 1025, 1313
SchI	GAGTC	1 cut(s)	1463
ScrFI	CCNGG	1 cut(s)	1489
SfaNI	GCATC	5 cut(s)	88, 837, 978, 1352, 1383
SfcI	CTRYAG	1 cut(s)	823
SinI	GGWCC	3 cut(s)	347, 1025, 1313
SmiMI	CAYNNNNRTG	5 cut(s)	557, 563, 878, 1379, 1614
SmlI	CTYRAG	1 cut(s)	1018
SmoI	CTYRAG	1 cut(s)	1018
SpeI	ACTAGT	2 cut(s)	658, 1237
SsiI	CCGC	4 cut(s)	102, 961, 991, 1603
SspMI	CTAG	9 cut(s)	71, 266, 293, 326, 659, 1094, 1176, 1238, 1448
StyD4I	CCNGG	1 cut(s)	1487
StyI	CCWWGG	1 cut(s)	292
TaaI	ACNGT	6 cut(s)	676, 1325, 1381, 1418, 1461, 1543
TaiI	ACGT	4 cut(s)	173, 504, 897, 1371
TaqI	TCGA	2 cut(s)	999, 1261
TaqII	GACCGA	1 cut(s)	395
TatI	WGTACW	3 cut(s)	688, 882, 1223
TauI	GCSGC	2 cut(s)	104, 1606
TfiI	GAWTC	4 cut(s)	737, 790, 968, 1390
TscAI	CASTG	7 cut(s)	417, 1035, 1171, 1226, 1386, 1464, 1596
TseFI	GTSAC	3 cut(s)	1455, 1552, 1672
TseI	GCWGC	2 cut(s)	516, 825
Tsp45I	GTSAC	3 cut(s)	1455, 1552, 1672
TspDTI	ATGAA	8 cut(s)	51, 581, 626, 639, 825, 1028, 1294, 1647
TspRI	CASTG	7 cut(s)	417, 1035, 1171, 1226, 1386, 1464, 1596
Van91I	CCANNNNNTGG	1 cut(s)	356
VpaK11BI	GGWCC	3 cut(s)	347, 1025, 1313
XapI	RAATTY	3 cut(s)	383, 953, 1567
XceI	RCATGY	1 cut(s)	883
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1157
XmaJI	CCTAGG	1 cut(s)	292
XmiI	GTMKAC	1 cut(s)	1261
XmnI	GAANNNNTTC	1 cut(s)	402
XspI	CTAG	9 cut(s)	71, 266, 293, 326, 659, 1094, 1176, 1238, 1448
Zsp2I	ATGCAT	2 cut(s)	881, 1345

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.