Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001018.1

Orthogroup ID

OG0001152

Physical Location & Seq

Genomic Coordinates Forward (+)

212049 .. 214874

Gene Structure 2826 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001018.1_g000049.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

atggccaatgcaagcaacaccacccaatccatcaaccctgggatatctggtccaccagagttttgtatatcttccccgctagccagtggcttcagaagcatttgggatgaccgttatcacctggaccatccattgacgctgacaatggctaaaatcatgctactcgttgttacctcgcaagctggcattatcttggggccatctgtgatagggaacaacaagcattttagggacaccctatttggagaaaaagtacagtttccggtgtttgacgtaatagctcaaatgggtgttgtatactctctgttcctaactgcagtgaaacttgacctgggcatgctcaaaaggacggcaaagacttcctggaagatttttctagcaagcctcctttgtcctacagtagtcttcttcagcttcgtttacccactagccggcgcagttcctggattcagaggaggaaaagtcatgctcttctggactacgagttctttatctttcacttatttcccagtcatagctcaagcattggatgaactcaaccttttgacctcagagttgggccaacttgccttgtctgcctcaatgctcaacgatgcactgcaatggttcttaacagcattgaacgttgtagttatgcaagaaaaagtaatatattcaattgggattatcttttccttatttgcgttggtaattttcactttgtatgttgcacgcccacttatgctatttacagttaagaatacgccagaaggataccagccgaaggaaatttatgtagttgcaatacaacttggagttctagtcatggcttttatgtctgacgccataggcatgagccatatggctggtcctataatcctggggttggccgtaccagatggacaacttggtgcaacattaatagccaagaccgaatacttggtctccgaagtctttctgccactgttctttttccgaattggcaccagcatagatatgtacaagattagccgttgggtgagttttaccaaacttcaggctatcattacagcgttttatgctgcaaagactatgggaattacaatggctggattattttccaaaattagcttcaaaaacagtctcgtcctcagcatgatgatgaatatcaagggtatactggagcttattctttataatggatggttgtccatgaagcttatagatgaacaattttttgcccaaatggtgttctctctgctggcgatgaccatgcttgtaaccccaatgatacgattctcgtacattcctcctatttgggttggatcaaaaaccaatggtccacaggtcaaacaaattcaatcaatggcaagtaagtcagaaacatttcgcattctctgctgtgtccacaacgaagaaagtgtccacagcatcattacactcctggaagcctcaaatccaccagaagcgagccccatcactgcctatgttgtccacgcactccacgacattggccgtgctgcaccagtactagtcccttacaagaagcataaaaagaaatttaagtggtcagatacagcaagtgatcaaatcgttcaagcctttgagaattactcaaaaaactctggaggaccagtctcaattcaagcctacactatggtcaatccctacaaatacatgcaccagaccatttttcgtctcgctcaggaccagctagtacctctaatcatcattccattccatgaaaatcaccagtctcttgttgactccaatatgactggtccgatacgccaattcaaccttaatgttcaggcatattctccatgcacagtgggaatactagttgatagaggctcgcattctcggatgagcttttcgagtttcttctacaacattgctgtttttttcattggcggaccagatgaccgcgaggcattagcctacacttcacgcatgtgtgacaacccagaagtggaactgacggtgttcaggataattgtgcgaatcaataaatcaaaaggtatagaagaggatacagagttcaagcttgacgagtcattggttcaggagtttaagctacggaaccttgggaatgatcgattgaattggcatgacatcgaggtggatgactgggtacaggttatgactgccattagtagctcgcaaggacactatgaccttgtgatggttgggaagcgacattcagatatatctttgagggatgaagaaatggtagagttcgtgcaaaattcagagctgggagtgattggcgacatgcttgcttcatcagatttctgtggtggaacagtgaatgtattagtgatgcaagagagtagggacttgggaattggagcttttcgttgtgactccttgaaaagttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

779

Amino Acids

86.84

Weight (kDa)

6.36

Isoelectric Point (pI)

35.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001152)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43690 FvH4_7g25211 FvH4_7g25250 FvH4_7g25290 FvH4_7g25310
malus_domestica	MD01G1158700.v1.1 MD01G1158800.v1.1 MD07G1227200.v1.1 MD07G1227600.v1.1
prunus_persica	Prupe.2G257000_v2.0.a1 Prupe.2G257100_v2.0.a1
pyrus_communis	pycom01g17540
rosa_chinensis	RchiOBHm_Chr1g0371191 RchiOBHm_Chr1g0371201 RchiOBHm_Chr1g0371211
rosa_laevigata	RLG00000026978 RLG00000026979 RLG00000026980 RLG00000026981 RLG00000026983 RLG00000036771
rosa_multiflora	Rmu_co8222838.1_g000001 Rmu_sc0000631.1_g000023 Rmu_sc0001018.1_g000042 Rmu_sc0001018.1_g000044 Rmu_sc0001018.1_g000049 Rmu_sc0001018.1_g000050 Rmu_sc0001018.1_g000051 Rmu_sc0008081.1_g000003
rosa_roxburghii	Rroxscaffold_4G00285900 Rroxscaffold_4G00285910
rosa_rugosa	Rorug01G0361700 Rorug01G0361900 Rorug01G0362000 Rorug01G0362200 Rorug05G0460600
rosa_samantha	Rh1AG372000 Rh1AG372200 Rh1AG372300 Rh1BG335100 Rh1BG335500 Rh1BG335700 Rh1BG335800 Rh1CG348600 Rh1CG349000 Rh1CG349100 Rh1CG349200 Rh1DG366500 Rh1DG366900 Rh1DG367000 Rh5BG537300 Rh5CG560800 Rh5DG548900
rosa_wichuraiana	Rw1G032720 Rw1G032730 Rw1G032740 Rw5G047750 Rw5G047880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1155
AccB1I	GGYRCC	1 cut(s)	962
AccI	GTMKAC	2 cut(s)	297, 1135
AccII	CGCG	1 cut(s)	1887
AciI	CCGC	3 cut(s)	77, 1872, 1885
AclI	AACGTT	1 cut(s)	624
AclWI	GGATC	1 cut(s)	1291
AcoI	YGGCCR	3 cut(s)	3, 867, 1471
AcsI	RAATTY	4 cut(s)	768, 1314, 1517, 2206
AcuI	CTGAAG	3 cut(s)	76, 394, 998
AcyI	GRCGYC	1 cut(s)	822
AfaI	GTAC	7 cut(s)	255, 873, 980, 1262, 1488, 1677, 2094
AfiI	CCNNNNNNNGG	5 cut(s)	431, 763, 865, 1930, 2143
AhlI	ACTAGT	2 cut(s)	1489, 1798
AjnI	CCWGG	7 cut(s)	37, 120, 330, 362, 442, 858, 1401
AjuI	GAANNNNNNNTTGG	2 cut(s)	1073, 1105
AleI	CACNNNNGTG	1 cut(s)	1912
AloI	GAACNNNNNNTCC	4 cut(s)	469, 501, 1982, 2014
Alw26I	GTCTC	5 cut(s)	928, 1106, 1600, 1661, 1719
AlwI	GGATC	1 cut(s)	1291
AlwNI	CAGNNNCTG	1 cut(s)	443
AoxI	GGCC	5 cut(s)	3, 197, 559, 867, 1471
ApeKI	GCWGC	2 cut(s)	1040, 1478
ApoI	RAATTY	4 cut(s)	768, 1314, 1517, 2206
ArsI	GACNNNNNNTTYG	6 cut(s)	224, 256, 906, 938, 1365, 1397
AseI	ATTAAT	1 cut(s)	899
Asp700I	GAANNNNTTC	2 cut(s)	933, 1344
AspLEI	GCGC	1 cut(s)	437
AsuHPI	GGTGA	3 cut(s)	110, 1009, 1700
AsuNHI	GCTAGC	1 cut(s)	79
AvaII	GGWCC	8 cut(s)	50, 124, 848, 1298, 1589, 1666, 1739, 1874
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	962
BanII	GRGCYC	1 cut(s)	1433
BbsI	GAAGAC	1 cut(s)	397
BbvCI	CCTCAGC	1 cut(s)	1109
BbvI	GCAGC	2 cut(s)	1027, 1465
BccI	CCATC	7 cut(s)	38, 135, 208, 872, 1155, 1442, 2137
BceAI	ACGGC	4 cut(s)	366, 854, 975, 1458
BcgI	CGANNNNNNTGC	4 cut(s)	1213, 1247, 2219, 2253
BciT130I	CCWGG	7 cut(s)	39, 122, 332, 364, 444, 860, 1403
BciVI	GTATCC	2 cut(s)	746, 1984
BclI	TGATCA	1 cut(s)	1543
BcoDI	GTCTC	5 cut(s)	928, 1106, 1600, 1661, 1719
BcuI	ACTAGT	2 cut(s)	1489, 1798
BfaI	CTAG	7 cut(s)	80, 377, 428, 800, 1490, 1673, 1799
BfmI	CTRYAG	2 cut(s)	315, 396
BfuI	GTATCC	2 cut(s)	746, 1984
BisI	GCNGC	2 cut(s)	1041, 1479
BlsI	GCNGC	2 cut(s)	1042, 1480
BmcAI	AGTACT	1 cut(s)	1488
Bme1390I	CCNGG	7 cut(s)	39, 122, 332, 364, 444, 860, 1403
Bme18I	GGWCC	8 cut(s)	50, 124, 848, 1298, 1589, 1666, 1739, 1874
BmiI	GGNNCC	3 cut(s)	198, 964, 2042
BmrFI	CCNGG	7 cut(s)	39, 122, 332, 364, 444, 860, 1403
BmrI	ACTGGG	2 cut(s)	503, 2098
BmsI	GCATC	3 cut(s)	583, 1398, 2271
BmtI	GCTAGC	1 cut(s)	83
BmuI	ACTGGG	2 cut(s)	503, 2098
BpiI	GAAGAC	1 cut(s)	397
BplI	GAGNNNNNCTC	2 cut(s)	1556, 1588
BpmI	CTGGAG	2 cut(s)	1160, 1605
Bpu10I	CCTNAGC	2 cut(s)	1109, 1662
BpuEI	CTTGAG	1 cut(s)	504
Bsa29I	ATCGAT	1 cut(s)	2056
BsaBI	GATNNNNATC	1 cut(s)	1124
BsaHI	GRCGYC	1 cut(s)	822
BsaI	GGTCTC	1 cut(s)	928
BsaJI	CCNNGG	5 cut(s)	37, 38, 331, 859, 2044
BsaWI	WCCGGW	1 cut(s)	262
Bsc4I	CCNNNNNNNGG	5 cut(s)	431, 763, 865, 1930, 2143
Bse118I	RCCGGY	1 cut(s)	431
Bse1I	ACTGG	8 cut(s)	84, 509, 1143, 1484, 1592, 1711, 1741, 2093
Bse3DI	GCAATG	2 cut(s)	608, 1851
Bse8I	GATNNNNATC	1 cut(s)	1124
BseBI	CCWGG	7 cut(s)	39, 122, 332, 364, 444, 860, 1403
BseCI	ATCGAT	1 cut(s)	2056
BseDI	CCNNGG	5 cut(s)	37, 38, 331, 859, 2044
BseGI	GGATG	7 cut(s)	112, 127, 535, 1166, 1830, 2089, 2185
BseJI	GATNNNNATC	1 cut(s)	1124
BseLI	CCNNNNNNNGG	5 cut(s)	431, 763, 865, 1930, 2143
BseMI	GCAATG	2 cut(s)	608, 1851
BseMII	CTCAG	3 cut(s)	564, 1123, 1676
BseNI	ACTGG	8 cut(s)	84, 509, 1143, 1484, 1592, 1711, 1741, 2093
BseRI	GAGGAG	1 cut(s)	468
BseXI	GCAGC	2 cut(s)	1027, 1465
BseYI	CCCAGC	1 cut(s)	2215
BsgI	GTGCAG	1 cut(s)	1464
Bsh1236I	CGCG	1 cut(s)	1887
BshFI	GGCC	5 cut(s)	5, 199, 561, 869, 1473
BshNI	GGYRCC	1 cut(s)	962
BshVI	ATCGAT	1 cut(s)	2056
BsiSI	CCGG	2 cut(s)	263, 432
BslFI	GGGAC	3 cut(s)	245, 1478, 2309
BslI	CCNNNNNNNGG	5 cut(s)	431, 763, 865, 1930, 2143
BsmAI	GTCTC	5 cut(s)	928, 1106, 1600, 1661, 1719
BsmBI	CGTCTC	1 cut(s)	1661
BsmFI	GGGAC	3 cut(s)	245, 1478, 2309
BsmI	GAATGC	2 cut(s)	1350, 1816
BsnI	GGCC	5 cut(s)	5, 199, 561, 869, 1473
Bso31I	GGTCTC	1 cut(s)	928
Bsp1286I	GDGCHC	1 cut(s)	1433
Bsp1407I	TGTACA	1 cut(s)	978
Bsp143I	GATC	3 cut(s)	1283, 1543, 2053
BspACI	CCGC	3 cut(s)	77, 1872, 1885
BspANI	GGCC	5 cut(s)	5, 199, 561, 869, 1473
BspCNI	CTCAG	3 cut(s)	563, 1122, 1675
BspDI	ATCGAT	1 cut(s)	2056
BspFNI	CGCG	1 cut(s)	1887
BspLI	GGNNCC	3 cut(s)	198, 964, 2042
BspMAI	CTGCAG	1 cut(s)	319
BspOI	GCTAGC	1 cut(s)	83
BspPI	GGATC	1 cut(s)	1291
BspQI	GCTCTTC	1 cut(s)	476
BspT107I	GGYRCC	1 cut(s)	962
BspTNI	GGTCTC	1 cut(s)	928
BsrDI	GCAATG	2 cut(s)	608, 1851
BsrFI	RCCGGY	1 cut(s)	431
BsrGI	TGTACA	1 cut(s)	978
BsrI	ACTGG	8 cut(s)	84, 509, 1143, 1484, 1592, 1711, 1741, 2093
BssAI	RCCGGY	1 cut(s)	431
BssECI	CCNNGG	5 cut(s)	37, 38, 331, 859, 2044
BssMI	GATC	3 cut(s)	1283, 1543, 2053
BssNAI	GTATAC	2 cut(s)	298, 1136
BssNI	GRCGYC	1 cut(s)	822
BssT1I	CCWWGG	1 cut(s)	2044
Bst1107I	GTATAC	2 cut(s)	298, 1136
Bst2UI	CCWGG	7 cut(s)	39, 122, 332, 364, 444, 860, 1403
Bst4CI	ACNGT	9 cut(s)	113, 258, 400, 733, 945, 1100, 1789, 1942, 2266
Bst6I	CTCTTC	2 cut(s)	476, 1980
BstACI	GRCGYC	1 cut(s)	822
BstAPI	GCANNNNNTGC	1 cut(s)	1356
BstAUI	TGTACA	1 cut(s)	978
BstDEI	CTNAG	3 cut(s)	550, 1109, 1662
BstF5I	GGATG	7 cut(s)	112, 127, 535, 1166, 1830, 2089, 2185
BstFNI	CGCG	1 cut(s)	1887
BstHHI	GCGC	1 cut(s)	437
BstKTI	GATC	3 cut(s)	1286, 1546, 2056
BstMAI	GTCTC	5 cut(s)	928, 1106, 1600, 1661, 1719
BstMBI	GATC	3 cut(s)	1283, 1543, 2053
BstMWI	GCNNNNNNNGC	4 cut(s)	96, 575, 1037, 1356
BstNI	CCWGG	7 cut(s)	39, 122, 332, 364, 444, 860, 1403
BstNSI	RCATGY	4 cut(s)	340, 1639, 1915, 2236
BstSCI	CCNGG	7 cut(s)	37, 120, 330, 362, 442, 858, 1401
BstSFI	CTRYAG	2 cut(s)	315, 396
BstUI	CGCG	1 cut(s)	1887
BstV1I	GCAGC	2 cut(s)	1027, 1465
BstV2I	GAAGAC	1 cut(s)	397
BstXI	CCANNNNNNTGG	2 cut(s)	845, 1469
BstZ17I	GTATAC	2 cut(s)	298, 1136
Bsu15I	ATCGAT	1 cut(s)	2056
BsuI	GTATCC	2 cut(s)	746, 1984
BsuRI	GGCC	5 cut(s)	5, 199, 561, 869, 1473
BsuTUI	ATCGAT	1 cut(s)	2056
BtgZI	GCGATG	1 cut(s)	1238
BtsCI	GGATG	7 cut(s)	112, 127, 535, 1166, 1830, 2089, 2185
BtsI	GCAGTG	3 cut(s)	324, 596, 1437
BtsIMutI	CAGTG	7 cut(s)	91, 324, 596, 941, 1437, 1794, 2271
CaiI	CAGNNNCTG	1 cut(s)	443
CfoI	GCGC	1 cut(s)	437
Cfr10I	RCCGGY	1 cut(s)	431
ClaI	ATCGAT	1 cut(s)	2056
CseI	GACGC	2 cut(s)	145, 830
Csp6I	GTAC	7 cut(s)	254, 872, 979, 1261, 1487, 1676, 2093
CviQI	GTAC	7 cut(s)	254, 872, 979, 1261, 1487, 1676, 2093
DdeI	CTNAG	3 cut(s)	550, 1109, 1662
DpnI	GATC	3 cut(s)	1285, 1545, 2055
DpnII	GATC	3 cut(s)	1283, 1543, 2053
EaeI	YGGCCR	3 cut(s)	3, 867, 1471
Eam1104I	CTCTTC	2 cut(s)	476, 1980
EarI	CTCTTC	2 cut(s)	476, 1980
EciI	GGCGGA	1 cut(s)	1887
Eco130I	CCWWGG	1 cut(s)	2044
Eco24I	GRGCYC	1 cut(s)	1433
Eco31I	GGTCTC	1 cut(s)	928
Eco32I	GATATC	1 cut(s)	45
Eco47I	GGWCC	8 cut(s)	50, 124, 848, 1298, 1589, 1666, 1739, 1874
Eco57I	CTGAAG	3 cut(s)	76, 394, 998
EcoRII	CCWGG	7 cut(s)	37, 120, 330, 362, 442, 858, 1401
EcoRV	GATATC	1 cut(s)	45
EcoT14I	CCWWGG	1 cut(s)	2044
EcoT38I	GRGCYC	1 cut(s)	1433
ErhI	CCWWGG	1 cut(s)	2044
Esp3I	CGTCTC	1 cut(s)	1661
FaqI	GGGAC	3 cut(s)	245, 1478, 2309
FauI	CCCGC	1 cut(s)	84
FauNDI	CATATG	1 cut(s)	840
FbaI	TGATCA	1 cut(s)	1543
FblI	GTMKAC	2 cut(s)	297, 1135
Fnu4HI	GCNGC	2 cut(s)	1041, 1479
FokI	GGATG	7 cut(s)	114, 119, 542, 1173, 1837, 2096, 2192
FriOI	GRGCYC	1 cut(s)	1433
Fsp4HI	GCNGC	2 cut(s)	1041, 1479
FspBI	CTAG	7 cut(s)	80, 377, 428, 800, 1490, 1673, 1799
GlaI	GCGC	1 cut(s)	436
GluI	GCNGC	2 cut(s)	1041, 1479
GsaI	CCCAGC	1 cut(s)	2219
GsuI	CTGGAG	2 cut(s)	1160, 1605
HaeIII	GGCC	5 cut(s)	5, 199, 561, 869, 1473
HapII	CCGG	2 cut(s)	263, 432
HgaI	GACGC	2 cut(s)	145, 830
HhaI	GCGC	1 cut(s)	437
Hin1I	GRCGYC	1 cut(s)	822
Hin6I	GCGC	1 cut(s)	435
HinP1I	GCGC	1 cut(s)	435
HincII	GTYRAC	1 cut(s)	1723
HindII	GTYRAC	1 cut(s)	1723
HindIII	AAGCTT	2 cut(s)	1175, 2003
HinfI	GANTC	6 cut(s)	447, 1254, 1724, 1962, 2012, 2324
HpaII	CCGG	2 cut(s)	263, 432
HphI	GGTGA	3 cut(s)	110, 1009, 1700
Hpy166II	GTNNAC	9 cut(s)	53, 298, 421, 1136, 1301, 1366, 1384, 1453, 1723
Hpy188III	TCNNGA	5 cut(s)	475, 1584, 1664, 1948, 2024
Hpy8I	GTNNAC	9 cut(s)	53, 298, 421, 1136, 1301, 1366, 1384, 1453, 1723
HpyAV	CCTTC	2 cut(s)	743, 757
HpyCH4III	ACNGT	9 cut(s)	113, 258, 400, 733, 945, 1100, 1789, 1942, 2266
HpyCH4IV	ACGT	2 cut(s)	273, 624
HpyF10VI	GCNNNNNNNGC	4 cut(s)	96, 575, 1037, 1356
HpyF3I	CTNAG	3 cut(s)	550, 1109, 1662
HpySE526I	ACGT	2 cut(s)	273, 624
Hsp92I	GRCGYC	1 cut(s)	822
HspAI	GCGC	1 cut(s)	435
KroI	GCCGGC	1 cut(s)	431
KroNI	GCCGGC	1 cut(s)	433
Ksp22I	TGATCA	1 cut(s)	1543
Kzo9I	GATC	3 cut(s)	1283, 1543, 2053
LguI	GCTCTTC	1 cut(s)	476
LmnI	GCTCC	2 cut(s)	1141, 2309
Lsp1109I	GCAGC	2 cut(s)	1027, 1465
LweI	GCATC	3 cut(s)	583, 1398, 2271
MaeI	CTAG	7 cut(s)	80, 377, 428, 800, 1490, 1673, 1799
MaeII	ACGT	2 cut(s)	273, 624
MaeIII	GTNAC	4 cut(s)	169, 1237, 1916, 2321
MalI	GATC	3 cut(s)	1285, 1545, 2055
MboI	GATC	3 cut(s)	1283, 1543, 2053
MboII	GAAGA	9 cut(s)	63, 379, 397, 400, 463, 1385, 1834, 1997, 2195
MfeI	CAATTG	1 cut(s)	657
MhlI	GDGCHC	1 cut(s)	1433
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	1718, 2021, 2318
MmeI	TCCRAC	1 cut(s)	1261
Mox20I	TGGCCA	1 cut(s)	5
MroNI	GCCGGC	1 cut(s)	431
MroXI	GAANNNNTTC	2 cut(s)	933, 1344
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	7 cut(s)	611, 735, 899, 1521, 1761, 2031, 2338
MslI	CAYNNNNRTG	6 cut(s)	601, 830, 974, 1118, 1912, 2078
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	2 cut(s)	263, 432
MspR9I	CCNGG	7 cut(s)	39, 122, 332, 364, 444, 860, 1403
MunI	CAATTG	1 cut(s)	657
Mva1269I	GAATGC	2 cut(s)	1350, 1816
MvaI	CCWGG	7 cut(s)	39, 122, 332, 364, 444, 860, 1403
MvnI	CGCG	1 cut(s)	1887
MwoI	GCNNNNNNNGC	4 cut(s)	96, 575, 1037, 1356
NaeI	GCCGGC	1 cut(s)	433
NdeI	CATATG	1 cut(s)	840
NdeII	GATC	3 cut(s)	1283, 1543, 2053
NgoMIV	GCCGGC	1 cut(s)	431
NheI	GCTAGC	1 cut(s)	79
NlaIV	GGNNCC	3 cut(s)	198, 964, 2042
NmuCI	GTSAC	2 cut(s)	1916, 2321
NspI	RCATGY	4 cut(s)	340, 1639, 1915, 2236
OliI	CACNNNNGTG	1 cut(s)	1912
PaeI	GCATGC	1 cut(s)	340
PasI	CCCWGGG	1 cut(s)	38
PciSI	GCTCTTC	1 cut(s)	476
PcsI	WCGNNNNNNNCGW	1 cut(s)	1461
PctI	GAATGC	2 cut(s)	1350, 1816
PdiI	GCCGGC	1 cut(s)	433
PdmI	GAANNNNTTC	2 cut(s)	933, 1344
PfeI	GAWTC	3 cut(s)	447, 1254, 1962
PfoI	TCCNGGA	3 cut(s)	362, 442, 1401
PkrI	GCNGC	2 cut(s)	1042, 1480
PleI	GAGTC	3 cut(s)	1718, 2020, 2318
PpsI	GAGTC	3 cut(s)	1718, 2020, 2318
PshBI	ATTAAT	1 cut(s)	899
PsiI	TTATAA	1 cut(s)	1155
Psp1406I	AACGTT	1 cut(s)	624
Psp6I	CCWGG	7 cut(s)	37, 120, 330, 362, 442, 858, 1401
PspFI	CCCAGC	1 cut(s)	2215
PspGI	CCWGG	7 cut(s)	37, 120, 330, 362, 442, 858, 1401
PspN4I	GGNNCC	3 cut(s)	198, 964, 2042
PstI	CTGCAG	1 cut(s)	319
PstNI	CAGNNNCTG	1 cut(s)	443
RsaI	GTAC	7 cut(s)	255, 873, 980, 1262, 1488, 1677, 2094
RsaNI	GTAC	7 cut(s)	254, 872, 979, 1261, 1487, 1676, 2093
RseI	CAYNNNNRTG	6 cut(s)	601, 830, 974, 1118, 1912, 2078
SapI	GCTCTTC	1 cut(s)	476
SaqAI	TTAA	7 cut(s)	611, 735, 899, 1521, 1761, 2031, 2338
SatI	GCNGC	2 cut(s)	1041, 1479
Sau3AI	GATC	3 cut(s)	1283, 1543, 2053
ScaI	AGTACT	1 cut(s)	1488
SchI	GAGTC	3 cut(s)	1718, 2021, 2318
ScrFI	CCNGG	7 cut(s)	39, 122, 332, 364, 444, 860, 1403
SduI	GDGCHC	1 cut(s)	1433
SfaNI	GCATC	3 cut(s)	583, 1398, 2271
SfcI	CTRYAG	2 cut(s)	315, 396
SinI	GGWCC	8 cut(s)	50, 124, 848, 1298, 1589, 1666, 1739, 1874
SmiMI	CAYNNNNRTG	6 cut(s)	601, 830, 974, 1118, 1912, 2078
SmlI	CTYRAG	1 cut(s)	519
SmoI	CTYRAG	1 cut(s)	519
SpeI	ACTAGT	2 cut(s)	1489, 1798
SphI	GCATGC	1 cut(s)	340
SsiI	CCGC	3 cut(s)	77, 1872, 1885
SspMI	CTAG	7 cut(s)	80, 377, 428, 800, 1490, 1673, 1799
StyD4I	CCNGG	7 cut(s)	37, 120, 330, 362, 442, 858, 1401
StyI	CCWWGG	1 cut(s)	2044
TaaI	ACNGT	9 cut(s)	113, 258, 400, 733, 945, 1100, 1789, 1942, 2266
TaiI	ACGT	2 cut(s)	276, 627
TaqI	TCGA	3 cut(s)	1835, 2056, 2076
TaqII	GACCGA	1 cut(s)	926
TatI	WGTACW	3 cut(s)	253, 978, 1486
TfiI	GAWTC	3 cut(s)	447, 1254, 1962
Tru1I	TTAA	7 cut(s)	611, 735, 899, 1521, 1761, 2031, 2338
Tru9I	TTAA	7 cut(s)	611, 735, 899, 1521, 1761, 2031, 2338
TscAI	CASTG	7 cut(s)	91, 324, 603, 948, 1444, 1794, 2271
TseFI	GTSAC	2 cut(s)	1916, 2321
TseI	GCWGC	2 cut(s)	1040, 1478
Tsp45I	GTSAC	2 cut(s)	1916, 2321
TspDTI	ATGAA	8 cut(s)	546, 1136, 1187, 1200, 1716, 1855, 2196, 2232
TspGWI	ACGGA	1 cut(s)	2053
TspRI	CASTG	7 cut(s)	91, 324, 603, 948, 1444, 1794, 2271
VpaK11BI	GGWCC	8 cut(s)	50, 124, 848, 1298, 1589, 1666, 1739, 1874
VspI	ATTAAT	1 cut(s)	899
XapI	RAATTY	4 cut(s)	768, 1314, 1517, 2206
XceI	RCATGY	4 cut(s)	340, 1639, 1915, 2236
XmiI	GTMKAC	2 cut(s)	297, 1135
XmnI	GAANNNNTTC	2 cut(s)	933, 1344
XspI	CTAG	7 cut(s)	80, 377, 428, 800, 1490, 1673, 1799
ZrmI	AGTACT	1 cut(s)	1488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.