MD06G1103600.v1.1

transferase activity, transferring hexosyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0000558
Physical Location & Seq
Forward (+)
24173880 .. 24175031
1152 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1103600.v1.1.491

Sequence Viewer

Length: 1152 bp
ATGGCTCGTTCCCTTTCTGCCCTACGAGACTTAGTTAAGGTCCTAGCTGAGTCAACTCGGCTAGTCGCAATTGTTTTTTATGTTTTCGGTTCAGACGCATTTGATATGGCCAAAGAATTCCACGTGGCACCCTACTTGTTCTGGTCTACAACTGCCATGATGTTGAGTTTTGCATTTCATTTGCCAAGGCTTGACGAGACTACTACTTGCGAGTACAGGGACATGCCTGAACCGGTCCAATTCCCAGGTTGTGTACCTCTCCATGGTAGGGATTTTCTTGAACCTGTTCAAGATAGGAGCAATGAGGCCTATGCAGCCGTACTACGTACATCCAAAAAGTTGCTTTTGGTTGCTGGGGTCTTGGTCAACAGTAGTTTGGATTTGGAACCAAATGTTTTCAAGGCTTTGAAGAAAGGAAGAGCACAAGGGTTTCCACTAGTTTATCCAATCAGACCGATAATTAATCTCAGTCCGACCGATGGTGGAATAAATGGGCAACATGAGTGCTTGAGCTGGCTGGACAAGCAGCTACGTGGGTCGGATTTATTTGTTGCATTTGGAAGCGGCGGGACCCTCTCACTGAAGCAGATACAGGAGTTGGCATTAGGGCTTGAAATGAGTAGGCAGAGATTTCTTTGGGTTGTGAAGAGGCCAAATGAGACAGCTAAAAATGGTACTTACTTTGCTCCTAATAGGTTTTTGGATCCATTAGGTTTTCTACCAAATAAGTTTTTGGAGAGGACTAAAGATGTGGGTCTCGTTGTGCCGTCGTGGGTTCCTCAGGTTCAAGTGCTGAGTCACGCGTCACTGGGCGGGTTTATAACCCACTGTGGTTGGAACTCAGTTTTGGAGAGTGTCGTGAATGGTGTGCCTTTAATTGCTTGGCCTCTCTACGCAGAGCAAAGAAGTAATGTAGTATTGCTTGCTGATGATATAAAGATTGCATGGAGAGTGAAAATGAATGAAAAGGGGATAATGGAGAGCCAAGGCATTGCCAAGTATGCAAGGGGTTTAATTGAAGGAGATGAAGGGAAATTGCCAAGGAAGAAGGTGAAGGAGTTGCAAGAGGCTTCCAAAATTGCTTTGAGCCCAGAAGGGTTGTCAACAAAGTCACTTGCTGAGGTGGCTCAGATATGGAAACGCAACAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

384

Amino Acids

42.66

Weight (kDa)

9.01

Isoelectric Point (pI)

40.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 192 - 336 2.6e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64350
fragaria_vesca FvH4_5g04160 FvH4_5g04161 FvH4_5g04200 FvH4_5g04210 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211
malus_domestica MD06G1103300.v1.1 MD06G1103400.v1.1 MD06G1103500.v1.1 MD06G1103600.v1.1 MD06G1103700.v1.1 MD06G1116200.v1.1 MD14G1122800.v1.1 MD14G1133100.v1.1
prunus_persica Prupe.5G116100_v2.0.a1 Prupe.5G116300_v2.0.a1 Prupe.I001100_v2.0.a1
pyrus_communis pycom03g16970 pycom06g09790 pycom06g09810 pycom06g09830 pycom06g09840
rosa_chinensis RchiOBHm_Chr7g0195271 RchiOBHm_Chr7g0195281 RchiOBHm_Chr7g0195291 RchiOBHm_Chr7g0195301 RchiOBHm_Chr7g0195311 RchiOBHm_Chr7g0222791
rosa_laevigata RLG00000004129 RLG00000004130 RLG00000004133 RLG00000004134 RLG00000004135
rosa_multiflora Rmu_co8481937.1_g000001 Rmu_sc0002381.1_g000002 Rmu_sc0002381.1_g000003 Rmu_sc0002381.1_g000007 Rmu_sc0002881.1_g000005 Rmu_sc0007366.1_g000001 Rmu_sc0011789.1_g000001 Rmu_sc0039338.1_g000002 Rmu_sc0039339.1_g000002
rosa_roxburghii Rroxscaffold_3G00235780 Rroxscaffold_3G00260600 Rroxscaffold_3G00260620 Rroxscaffold_3G00260630
rosa_rugosa Rorug07G0022200 Rorug07G0022300 Rorug07G0022400 Rorug07G0022500 Rorug07G0022600 Rorug07G0216900
rosa_samantha Rh7AG149300 Rh7AG149400 Rh7AG149500 Rh7AG149600 Rh7AG149700 Rh7AG356800 Rh7BG150500 Rh7BG150600 Rh7BG150700 Rh7BG150800 Rh7BG150900 Rh7BG151200 Rh7BG350700 Rh7CG154100 Rh7CG154200 Rh7CG154300 Rh7CG154700 Rh7CG374200 Rh7DG150500 Rh7DG150600 Rh7DG150700 Rh7DG150800 Rh7DG150900
rosa_wichuraiana Rw7G012750 Rw7G012760 Rw7G012770 Rw7G012780 Rw7G030260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 821
AccB1I GGYRCC 1 cut(s) 127
AccI GTMKAC 1 cut(s) 146
AccII CGCG 1 cut(s) 803
AciI CCGC 3 cut(s) 564, 567, 813
AclWI GGATC 2 cut(s) 698, 711
AcoI YGGCCR 1 cut(s) 108
AcsI RAATTY 1 cut(s) 116
AcuI CTGAAG 1 cut(s) 602
AcvI CACGTG 1 cut(s) 124
AfaI GTAC 5 cut(s) 215, 255, 321, 328, 676
AfiI CCNNNNNNNGG 3 cut(s) 263, 268, 479
AflIII ACRYGT 1 cut(s) 801
AgeI ACCGGT 1 cut(s) 232
AgsI TTSAA 7 cut(s) 281, 290, 400, 409, 614, 788, 1019
AhlI ACTAGT 1 cut(s) 436
AjnI CCWGG 1 cut(s) 244
AjuI GAANNNNNNNTTGG 2 cut(s) 830, 862
AluBI AGCT 4 cut(s) 47, 513, 529, 665
AluI AGCT 4 cut(s) 47, 513, 529, 665
Alw21I GWGCWC 1 cut(s) 424
Alw26I GTCTC 4 cut(s) 21, 191, 653, 761
AlwI GGATC 2 cut(s) 698, 711
AoxI GGCC 4 cut(s) 108, 306, 650, 884
ApeKI GCWGC 2 cut(s) 314, 526
ApoI RAATTY 1 cut(s) 116
AseI ATTAAT 1 cut(s) 462
AsiGI ACCGGT 1 cut(s) 232
Asp700I GAANNNNTTC 1 cut(s) 285
AspS9I GGNCC 3 cut(s) 40, 235, 570
AsuHPI GGTGA 1 cut(s) 1063
AvaII GGWCC 3 cut(s) 40, 235, 570
AxyI CCTNAGG 1 cut(s) 780
BaeI ACNNNNGTAYC 2 cut(s) 581, 614
BalI TGGCCA 1 cut(s) 110
BamHI GGATCC 1 cut(s) 703
BanI GGYRCC 1 cut(s) 127
BanII GRGCYC 1 cut(s) 1091
BbrPI CACGTG 1 cut(s) 124
Bbv12I GWGCWC 1 cut(s) 424
BbvCI CCTCAGC 1 cut(s) 1119
BbvI GCAGC 2 cut(s) 326, 538
BccI CCATC 1 cut(s) 473
BceAI ACGGC 2 cut(s) 302, 751
BciT130I CCWGG 1 cut(s) 246
BcoDI GTCTC 4 cut(s) 21, 191, 653, 761
BcuI ACTAGT 1 cut(s) 436
BfaI CTAG 3 cut(s) 44, 62, 437
BisI GCNGC 3 cut(s) 315, 527, 565
BlsI GCNGC 3 cut(s) 316, 528, 566
Bme1390I CCNGG 1 cut(s) 246
Bme18I GGWCC 3 cut(s) 40, 235, 570
BmgT120I GGNCC 3 cut(s) 40, 235, 570
BmiI GGNNCC 6 cut(s) 129, 387, 571, 572, 705, 777
BmrFI CCNGG 1 cut(s) 246
BmrI ACTGGG 1 cut(s) 818
BmuI ACTGGG 1 cut(s) 818
Bpu10I CCTNAGC 1 cut(s) 1119
BpuEI CTTGAG 1 cut(s) 529
BsaAI YACGTR 3 cut(s) 124, 326, 533
BsaI GGTCTC 1 cut(s) 761
BsaJI CCNNGG 5 cut(s) 185, 244, 262, 985, 1040
BsaWI WCCGGW 1 cut(s) 232
Bsc4I CCNNNNNNNGG 3 cut(s) 263, 268, 479
Bse118I RCCGGY 1 cut(s) 232
Bse1I ACTGG 1 cut(s) 813
Bse21I CCTNAGG 1 cut(s) 780
Bse3DI GCAATG 2 cut(s) 307, 990
BseBI CCWGG 1 cut(s) 246
BseDI CCNNGG 5 cut(s) 185, 244, 262, 985, 1040
BseGI GGATG 1 cut(s) 329
BseLI CCNNNNNNNGG 3 cut(s) 263, 268, 479
BseMI GCAATG 2 cut(s) 307, 990
BseMII CTCAG 7 cut(s) 39, 481, 785, 794, 855, 1110, 1142
BseNI ACTGG 1 cut(s) 813
BseXI GCAGC 2 cut(s) 326, 538
BseYI CCCAGC 1 cut(s) 353
Bsh1236I CGCG 1 cut(s) 803
Bsh1285I CGRYCG 1 cut(s) 477
BshFI GGCC 4 cut(s) 110, 308, 652, 886
BshNI GGYRCC 1 cut(s) 127
BshTI ACCGGT 1 cut(s) 232
BsiEI CGRYCG 1 cut(s) 477
BsiHKAI GWGCWC 1 cut(s) 424
BsiSI CCGG 1 cut(s) 233
BslFI GGGAC 2 cut(s) 233, 583
BslI CCNNNNNNNGG 3 cut(s) 263, 268, 479
BsmAI GTCTC 4 cut(s) 21, 191, 653, 761
BsmFI GGGAC 2 cut(s) 233, 583
BsnI GGCC 4 cut(s) 110, 308, 652, 886
Bso31I GGTCTC 1 cut(s) 761
Bsp1286I GDGCHC 2 cut(s) 424, 1091
Bsp143I GATC 1 cut(s) 703
Bsp19I CCATGG 1 cut(s) 262
BspACI CCGC 3 cut(s) 564, 567, 813
BspANI GGCC 4 cut(s) 110, 308, 652, 886
BspCNI CTCAG 7 cut(s) 40, 480, 786, 793, 854, 1111, 1141
BspFNI CGCG 1 cut(s) 803
BspLI GGNNCC 6 cut(s) 129, 387, 571, 572, 705, 777
BspPI GGATC 2 cut(s) 698, 711
BspQI GCTCTTC 1 cut(s) 412
BspT107I GGYRCC 1 cut(s) 127
BspTNI GGTCTC 1 cut(s) 761
BsrDI GCAATG 2 cut(s) 307, 990
BsrFI RCCGGY 1 cut(s) 232
BsrI ACTGG 1 cut(s) 813
BssAI RCCGGY 1 cut(s) 232
BssECI CCNNGG 5 cut(s) 185, 244, 262, 985, 1040
BssMI GATC 1 cut(s) 703
BssT1I CCWWGG 4 cut(s) 185, 262, 985, 1040
Bst2UI CCWGG 1 cut(s) 246
Bst4CI ACNGT 2 cut(s) 371, 830
Bst6I CTCTTC 2 cut(s) 412, 641
BstBAI YACGTR 3 cut(s) 124, 326, 533
BstC8I GCNNGC 2 cut(s) 515, 924
BstDEI CTNAG 8 cut(s) 31, 48, 467, 780, 794, 841, 1119, 1128
BstDSI CCRYGG 1 cut(s) 262
BstF5I GGATG 1 cut(s) 329
BstFNI CGCG 1 cut(s) 803
BstKTI GATC 1 cut(s) 706
BstMAI GTCTC 4 cut(s) 21, 191, 653, 761
BstMBI GATC 1 cut(s) 703
BstMCI CGRYCG 1 cut(s) 477
BstMWI GCNNNNNNNGC 4 cut(s) 314, 523, 1001, 1124
BstNI CCWGG 1 cut(s) 246
BstNSI RCATGY 1 cut(s) 226
BstSCI CCNGG 1 cut(s) 244
BstSNI TACGTA 1 cut(s) 326
BstUI CGCG 1 cut(s) 803
BstV1I GCAGC 2 cut(s) 326, 538
BstX2I RGATCY 1 cut(s) 703
BstYI RGATCY 1 cut(s) 703
Bsu36I CCTNAGG 1 cut(s) 780
BsuRI GGCC 4 cut(s) 110, 308, 652, 886
BtgI CCRYGG 1 cut(s) 262
BtsCI GGATG 1 cut(s) 329
BtsIMutI CAGTG 3 cut(s) 578, 806, 826
Cac8I GCNNGC 2 cut(s) 515, 924
Cfr10I RCCGGY 1 cut(s) 232
Cfr13I GGNCC 3 cut(s) 40, 235, 570
CseI GACGC 2 cut(s) 104, 792
Csp6I GTAC 5 cut(s) 214, 254, 320, 327, 675
CspAI ACCGGT 1 cut(s) 232
CspCI CAANNNNNGTGG 2 cut(s) 815, 850
CviAII CATG 5 cut(s) 157, 223, 263, 500, 945
CviQI GTAC 5 cut(s) 214, 254, 320, 327, 675
DdeI CTNAG 8 cut(s) 31, 48, 467, 780, 794, 841, 1119, 1128
DpnI GATC 1 cut(s) 705
DpnII GATC 1 cut(s) 703
EaeI YGGCCR 1 cut(s) 108
Eam1104I CTCTTC 2 cut(s) 412, 641
EarI CTCTTC 2 cut(s) 412, 641
Eco105I TACGTA 1 cut(s) 326
Eco130I CCWWGG 4 cut(s) 185, 262, 985, 1040
Eco147I AGGCCT 1 cut(s) 308
Eco24I GRGCYC 1 cut(s) 1091
Eco31I GGTCTC 1 cut(s) 761
Eco47I GGWCC 3 cut(s) 40, 235, 570
Eco57I CTGAAG 1 cut(s) 602
Eco72I CACGTG 1 cut(s) 124
Eco81I CCTNAGG 1 cut(s) 780
EcoO109I RGGNCCY 2 cut(s) 40, 570
EcoRI GAATTC 1 cut(s) 116
EcoRII CCWGG 1 cut(s) 244
EcoT14I CCWWGG 4 cut(s) 185, 262, 985, 1040
EcoT38I GRGCYC 1 cut(s) 1091
ErhI CCWWGG 4 cut(s) 185, 262, 985, 1040
FaeI CATG 5 cut(s) 160, 226, 266, 503, 948
FaqI GGGAC 2 cut(s) 233, 583
FatI CATG 5 cut(s) 156, 222, 262, 499, 944
FauI CCCGC 2 cut(s) 560, 806
FblI GTMKAC 1 cut(s) 146
Fnu4HI GCNGC 3 cut(s) 315, 527, 565
FokI GGATG 1 cut(s) 316
FriOI GRGCYC 1 cut(s) 1091
Fsp4HI GCNGC 3 cut(s) 315, 527, 565
FspBI CTAG 3 cut(s) 44, 62, 437
GluI GCNGC 3 cut(s) 315, 527, 565
GsaI CCCAGC 1 cut(s) 357
HaeIII GGCC 4 cut(s) 110, 308, 652, 886
HapII CCGG 1 cut(s) 233
HgaI GACGC 2 cut(s) 104, 792
Hin1II CATG 5 cut(s) 160, 226, 266, 503, 948
HincII GTYRAC 3 cut(s) 54, 367, 1104
HindII GTYRAC 3 cut(s) 54, 367, 1104
HinfI GANTC 2 cut(s) 50, 796
HpaII CCGG 1 cut(s) 233
HphI GGTGA 1 cut(s) 1063
Hpy166II GTNNAC 5 cut(s) 54, 147, 254, 367, 1104
Hpy188I TCNGA 5 cut(s) 94, 452, 474, 541, 1131
Hpy188III TCNNGA 3 cut(s) 278, 290, 859
Hpy8I GTNNAC 5 cut(s) 54, 147, 254, 367, 1104
Hpy99I CGWCG 1 cut(s) 772
HpyAV CCTTC 5 cut(s) 1013, 1022, 1042, 1048, 1088
HpyCH4III ACNGT 2 cut(s) 371, 830
HpyCH4IV ACGT 3 cut(s) 123, 325, 532
HpyCH4V TGCA 6 cut(s) 173, 314, 554, 944, 1004, 1063
HpyF10VI GCNNNNNNNGC 4 cut(s) 314, 523, 1001, 1124
HpyF3I CTNAG 8 cut(s) 31, 48, 467, 780, 794, 841, 1119, 1128
HpySE526I ACGT 3 cut(s) 123, 325, 532
Hsp92II CATG 5 cut(s) 160, 226, 266, 503, 948
KflI GGGWCCC 1 cut(s) 570
Kzo9I GATC 1 cut(s) 703
LguI GCTCTTC 1 cut(s) 412
LmnI GCTCC 2 cut(s) 297, 691
Lsp1109I GCAGC 2 cut(s) 326, 538
MaeI CTAG 3 cut(s) 44, 62, 437
MaeII ACGT 3 cut(s) 123, 325, 532
MaeIII GTNAC 3 cut(s) 797, 804, 1110
MalI GATC 1 cut(s) 705
MboI GATC 1 cut(s) 703
MboII GAAGA 4 cut(s) 421, 429, 658, 1057
MfeI CAATTG 1 cut(s) 69
MflI RGATCY 1 cut(s) 703
MhlI GDGCHC 2 cut(s) 424, 1091
MlsI TGGCCA 1 cut(s) 110
MluCI AATT 8 cut(s) 69, 116, 239, 459, 876, 1014, 1034, 1077
MluI ACGCGT 1 cut(s) 801
MluNI TGGCCA 1 cut(s) 110
MlyI GAGTC 2 cut(s) 59, 805
MmeI TCCRAC 3 cut(s) 497, 519, 815
MnlI CCTC 9 cut(s) 267, 298, 584, 642, 732, 789, 897, 1060, 1114
Mox20I TGGCCA 1 cut(s) 110
MroXI GAANNNNTTC 1 cut(s) 285
MscI TGGCCA 1 cut(s) 110
MseI TTAA 4 cut(s) 36, 462, 875, 1013
Msp20I TGGCCA 1 cut(s) 110
MspI CCGG 1 cut(s) 233
MspR9I CCNGG 1 cut(s) 246
MunI CAATTG 1 cut(s) 69
MvaI CCWGG 1 cut(s) 246
MvnI CGCG 1 cut(s) 803
MwoI GCNNNNNNNGC 4 cut(s) 314, 523, 1001, 1124
NcoI CCATGG 1 cut(s) 262
NdeII GATC 1 cut(s) 703
NlaIII CATG 5 cut(s) 160, 226, 266, 503, 948
NlaIV GGNNCC 6 cut(s) 129, 387, 571, 572, 705, 777
NmeAIII GCCGAG 1 cut(s) 37
NmuCI GTSAC 3 cut(s) 797, 804, 1110
NspI RCATGY 1 cut(s) 226
PceI AGGCCT 1 cut(s) 308
PciSI GCTCTTC 1 cut(s) 412
PdmI GAANNNNTTC 1 cut(s) 285
PinAI ACCGGT 1 cut(s) 232
PkrI GCNGC 3 cut(s) 316, 528, 566
PleI GAGTC 2 cut(s) 58, 804
PmaCI CACGTG 1 cut(s) 124
PmlI CACGTG 1 cut(s) 124
PpsI GAGTC 2 cut(s) 58, 804
Ppu21I YACGTR 3 cut(s) 124, 326, 533
PpuMI RGGWCCY 2 cut(s) 40, 570
PshBI ATTAAT 1 cut(s) 462
PsiI TTATAA 1 cut(s) 821
Psp5II RGGWCCY 2 cut(s) 40, 570
Psp6I CCWGG 1 cut(s) 244
PspCI CACGTG 1 cut(s) 124
PspFI CCCAGC 1 cut(s) 353
PspGI CCWGG 1 cut(s) 244
PspN4I GGNNCC 6 cut(s) 129, 387, 571, 572, 705, 777
PspPI GGNCC 3 cut(s) 40, 235, 570
PspPPI RGGWCCY 2 cut(s) 40, 570
PsuI RGATCY 1 cut(s) 703
RsaI GTAC 5 cut(s) 215, 255, 321, 328, 676
RsaNI GTAC 5 cut(s) 214, 254, 320, 327, 675
SapI GCTCTTC 1 cut(s) 412
SaqAI TTAA 4 cut(s) 36, 462, 875, 1013
SatI GCNGC 3 cut(s) 315, 527, 565
Sau3AI GATC 1 cut(s) 703
Sau96I GGNCC 3 cut(s) 40, 235, 570
SchI GAGTC 2 cut(s) 59, 805
ScrFI CCNGG 1 cut(s) 246
SduI GDGCHC 2 cut(s) 424, 1091
SinI GGWCC 3 cut(s) 40, 235, 570
SmlI CTYRAG 1 cut(s) 508
SmoI CTYRAG 1 cut(s) 508
SnaBI TACGTA 1 cut(s) 326
SpeI ACTAGT 1 cut(s) 436
Sse9I AATT 8 cut(s) 69, 116, 239, 459, 876, 1014, 1034, 1077
SseBI AGGCCT 1 cut(s) 308
SsiI CCGC 3 cut(s) 564, 567, 813
SspMI CTAG 3 cut(s) 44, 62, 437
StuI AGGCCT 1 cut(s) 308
StyD4I CCNGG 1 cut(s) 244
StyI CCWWGG 4 cut(s) 185, 262, 985, 1040
TaaI ACNGT 2 cut(s) 371, 830
TaiI ACGT 3 cut(s) 126, 328, 535
TaqII GACCGA 2 cut(s) 469, 491
TasI AATT 8 cut(s) 69, 116, 239, 459, 876, 1014, 1034, 1077
TatI WGTACW 1 cut(s) 213
TauI GCSGC 1 cut(s) 567
Tru1I TTAA 4 cut(s) 36, 462, 875, 1013
Tru9I TTAA 4 cut(s) 36, 462, 875, 1013
TscAI CASTG 3 cut(s) 585, 813, 833
TseFI GTSAC 3 cut(s) 797, 804, 1110
TseI GCWGC 2 cut(s) 314, 526
Tsp45I GTSAC 3 cut(s) 797, 804, 1110
TspDTI ATGAA 4 cut(s) 167, 974, 978, 1041
TspRI CASTG 3 cut(s) 585, 813, 833
VpaK11BI GGWCC 3 cut(s) 40, 235, 570
VspI ATTAAT 1 cut(s) 462
XapI RAATTY 1 cut(s) 116
XceI RCATGY 1 cut(s) 226
XmiI GTMKAC 1 cut(s) 146
XmnI GAANNNNTTC 1 cut(s) 285
XspI CTAG 3 cut(s) 44, 62, 437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.