Rh7BG150500

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000558
Physical Location & Seq
Reverse (-)
11154616 .. 11158025
3410 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG150500.1

Sequence Viewer

Length: 786 bp
ATGGAGAAATCTCTGGTGACGCTCGATAAAGGCACCACCTGCTCCTCTTGGAACTACTCCGGCCAGAGATTAGCCACCGGCTCCCTCGACGGAACTCTCACCATCTTCGACTCGCGCCACCCGTCTTCTTCCTCTTTCTCCTCCACCTCAAAATCCAAGGTGCACCACGCTTCTGCCATTGTCAAAGTTGTCTGGGTTCCTCCGGAGTTCGGTCACGCAGTGGCATGTGTTTGCGGAGATGGAACGTTGTCGTTGTGGGAAGAGATTGTTGAAGATGCACAACCTCTTCAATGGAAGCTGTGCAAAAGCTTTAGAAGTGATTCACCTCAGCTGCTAGATGTTCAATTTGGGGGTTCATCGTCAAGTTTGAAAATGGTTGCTGCATATTCGGACGGCAACGTCAAGCTCTATGAGCTACTTGATCCATTGGAATTGAAAAACTGGCAGCTTCAGGCGGAAATTCAGAATGTTATTGATTCAGTGTCTACACTTGGGAAAGCTGTGTGCTTATCCGCATCTATATCATGGAATCCAAGAGGAGAAGAAAGCCAGGAATCAAGTTTTGTTTTGGGTTTCAATTCAGACACTCTACAACTTAATTCATCCAAGGTAAGCTCGTACTTTCCTATCTTAAATATTGCAGGTTTATCTTCTTCATGTCAATTACATGAGCGTGCTCTTTTTTTTTTGTCTCCCTCCCAATTTTTTTTTCTTTACACACTAGTTAAGCATCTTTCATGTTTGCAGTACGTTTTAGAATTTATAGTATCATATGGAGGTCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

261

Amino Acids

28.62

Weight (kDa)

5.49

Isoelectric Point (pI)

48.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_THOC3 PF25174 15 - 87 5.5e-08 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64350
fragaria_vesca FvH4_5g04160 FvH4_5g04161 FvH4_5g04200 FvH4_5g04210 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211
malus_domestica MD06G1103300.v1.1 MD06G1103400.v1.1 MD06G1103500.v1.1 MD06G1103600.v1.1 MD06G1103700.v1.1 MD06G1116200.v1.1 MD14G1122800.v1.1 MD14G1133100.v1.1
prunus_persica Prupe.5G116100_v2.0.a1 Prupe.5G116300_v2.0.a1 Prupe.I001100_v2.0.a1
pyrus_communis pycom03g16970 pycom06g09790 pycom06g09810 pycom06g09830 pycom06g09840
rosa_chinensis RchiOBHm_Chr7g0195271 RchiOBHm_Chr7g0195281 RchiOBHm_Chr7g0195291 RchiOBHm_Chr7g0195301 RchiOBHm_Chr7g0195311 RchiOBHm_Chr7g0222791
rosa_laevigata RLG00000004129 RLG00000004130 RLG00000004133 RLG00000004134 RLG00000004135
rosa_multiflora Rmu_co8481937.1_g000001 Rmu_sc0002381.1_g000002 Rmu_sc0002381.1_g000003 Rmu_sc0002381.1_g000007 Rmu_sc0002881.1_g000005 Rmu_sc0007366.1_g000001 Rmu_sc0011789.1_g000001 Rmu_sc0039338.1_g000002 Rmu_sc0039339.1_g000002
rosa_roxburghii Rroxscaffold_3G00235780 Rroxscaffold_3G00260600 Rroxscaffold_3G00260620 Rroxscaffold_3G00260630
rosa_rugosa Rorug07G0022200 Rorug07G0022300 Rorug07G0022400 Rorug07G0022500 Rorug07G0022600 Rorug07G0216900
rosa_samantha Rh7AG149300 Rh7AG149400 Rh7AG149500 Rh7AG149600 Rh7AG149700 Rh7AG356800 Rh7BG150500 Rh7BG150600 Rh7BG150700 Rh7BG150800 Rh7BG150900 Rh7BG151200 Rh7BG350700 Rh7CG154100 Rh7CG154200 Rh7CG154300 Rh7CG154700 Rh7CG374200 Rh7DG150500 Rh7DG150600 Rh7DG150700 Rh7DG150800 Rh7DG150900
rosa_wichuraiana Rw7G012750 Rw7G012760 Rw7G012770 Rw7G012780 Rw7G030260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 47
AasI GACNNNNNNGTC 1 cut(s) 398
Acc36I ACCTGC 2 cut(s) 47, 632
AccB1I GGYRCC 1 cut(s) 32
AccI GTMKAC 1 cut(s) 485
AccII CGCG 1 cut(s) 115
AccIII TCCGGA 1 cut(s) 202
AciI CCGC 3 cut(s) 234, 455, 513
AclI AACGTT 1 cut(s) 245
AclWI GGATC 1 cut(s) 416
AcoI YGGCCR 1 cut(s) 61
AcsI RAATTY 2 cut(s) 459, 758
AcuI CTGAAG 1 cut(s) 434
AdeI CACNNNGTG 1 cut(s) 220
AfaI GTAC 2 cut(s) 620, 749
AfiI CCNNNNNNNGG 1 cut(s) 209
AgsI TTSAA 6 cut(s) 272, 290, 344, 370, 436, 577
AhlI ACTAGT 1 cut(s) 721
AjnI CCWGG 1 cut(s) 549
AjuI GAANNNNNNNTTGG 2 cut(s) 693, 725
AluBI AGCT 8 cut(s) 298, 309, 331, 406, 415, 448, 500, 615
AluI AGCT 8 cut(s) 298, 309, 331, 406, 415, 448, 500, 615
Alw21I GWGCWC 2 cut(s) 165, 679
Alw26I GTCTC 1 cut(s) 696
Alw44I GTGCAC 1 cut(s) 161
AlwI GGATC 1 cut(s) 416
Aor13HI TCCGGA 1 cut(s) 202
AoxI GGCC 1 cut(s) 61
ApaLI GTGCAC 1 cut(s) 161
ApeKI GCWGC 3 cut(s) 331, 380, 445
ApoI RAATTY 2 cut(s) 459, 758
Asp700I GAANNNNTTC 1 cut(s) 319
AspLEI GCGC 1 cut(s) 117
AsuHPI GGTGA 3 cut(s) 28, 91, 315
BaeGI GKGCMC 1 cut(s) 165
BanI GGYRCC 1 cut(s) 32
BbsI GAAGAC 1 cut(s) 117
Bbv12I GWGCWC 2 cut(s) 165, 679
BbvCI CCTCAGC 1 cut(s) 327
BbvI GCAGC 3 cut(s) 318, 367, 457
BccI CCATC 2 cut(s) 110, 233
BceAI ACGGC 1 cut(s) 409
BciT130I CCWGG 1 cut(s) 551
BcoDI GTCTC 1 cut(s) 696
BcuI ACTAGT 1 cut(s) 721
BfaI CTAG 2 cut(s) 335, 722
BfmI CTRYAG 1 cut(s) 782
BfuAI ACCTGC 2 cut(s) 47, 632
BisI GCNGC 3 cut(s) 332, 381, 446
BlsI GCNGC 3 cut(s) 333, 382, 447
Bme1390I CCNGG 1 cut(s) 551
BmiI GGNNCC 3 cut(s) 34, 82, 198
BmrFI CCNGG 1 cut(s) 551
BmsI GCATC 3 cut(s) 265, 524, 739
BpiI GAAGAC 1 cut(s) 117
Bpu10I CCTNAGC 1 cut(s) 327
BsaJI CCNNGG 2 cut(s) 156, 606
BsaWI WCCGGW 1 cut(s) 202
Bsc4I CCNNNNNNNGG 1 cut(s) 209
Bse118I RCCGGY 1 cut(s) 77
Bse1I ACTGG 1 cut(s) 446
BseAI TCCGGA 1 cut(s) 202
BseBI CCWGG 1 cut(s) 551
BseDI CCNNGG 2 cut(s) 156, 606
BseGI GGATG 1 cut(s) 602
BseLI CCNNNNNNNGG 1 cut(s) 209
BseMII CTCAG 1 cut(s) 341
BseNI ACTGG 1 cut(s) 446
BseRI GAGGAG 3 cut(s) 34, 130, 552
BseSI GKGCMC 1 cut(s) 165
BseXI GCAGC 3 cut(s) 318, 367, 457
Bsh1236I CGCG 1 cut(s) 115
BshFI GGCC 1 cut(s) 63
BshNI GGYRCC 1 cut(s) 32
BsiHKAI GWGCWC 2 cut(s) 165, 679
BsiSI CCGG 3 cut(s) 60, 78, 203
BslI CCNNNNNNNGG 1 cut(s) 209
BsmAI GTCTC 1 cut(s) 696
BsnI GGCC 1 cut(s) 63
Bsp1286I GDGCHC 2 cut(s) 165, 679
Bsp13I TCCGGA 1 cut(s) 202
Bsp143I GATC 1 cut(s) 421
BspACI CCGC 3 cut(s) 234, 455, 513
BspANI GGCC 1 cut(s) 63
BspCNI CTCAG 1 cut(s) 340
BspEI TCCGGA 1 cut(s) 202
BspFNI CGCG 1 cut(s) 115
BspLI GGNNCC 3 cut(s) 34, 82, 198
BspMI ACCTGC 2 cut(s) 47, 632
BspPI GGATC 1 cut(s) 416
BspT107I GGYRCC 1 cut(s) 32
BsrFI RCCGGY 1 cut(s) 77
BsrI ACTGG 1 cut(s) 446
BssAI RCCGGY 1 cut(s) 77
BssECI CCNNGG 2 cut(s) 156, 606
BssMI GATC 1 cut(s) 421
BssT1I CCWWGG 2 cut(s) 156, 606
Bst2UI CCWGG 1 cut(s) 551
Bst6I CTCTTC 2 cut(s) 255, 291
BstAPI GCANNNNNTGC 1 cut(s) 39
BstC8I GCNNGC 1 cut(s) 675
BstDEI CTNAG 1 cut(s) 327
BstF5I GGATG 1 cut(s) 602
BstFNI CGCG 1 cut(s) 115
BstHHI GCGC 1 cut(s) 117
BstKTI GATC 1 cut(s) 424
BstMAI GTCTC 1 cut(s) 696
BstMBI GATC 1 cut(s) 421
BstMWI GCNNNNNNNGC 2 cut(s) 39, 412
BstNI CCWGG 1 cut(s) 551
BstNSI RCATGY 1 cut(s) 228
BstSCI CCNGG 1 cut(s) 549
BstSFI CTRYAG 1 cut(s) 782
BstSLI GKGCMC 1 cut(s) 165
BstUI CGCG 1 cut(s) 115
BstV1I GCAGC 3 cut(s) 318, 367, 457
BstV2I GAAGAC 1 cut(s) 117
BsuRI GGCC 1 cut(s) 63
BtsCI GGATG 1 cut(s) 602
BtsI GCAGTG 1 cut(s) 225
BtsIMutI CAGTG 2 cut(s) 225, 486
BveI ACCTGC 2 cut(s) 47, 632
Cac8I GCNNGC 1 cut(s) 675
CfoI GCGC 1 cut(s) 117
Cfr10I RCCGGY 1 cut(s) 77
CseI GACGC 1 cut(s) 28
Csp6I GTAC 2 cut(s) 619, 748
CviAII CATG 5 cut(s) 225, 525, 657, 668, 738
CviQI GTAC 2 cut(s) 619, 748
DdeI CTNAG 1 cut(s) 327
DpnI GATC 1 cut(s) 423
DpnII GATC 1 cut(s) 421
DraIII CACNNNGTG 1 cut(s) 220
DrdI GACNNNNNNGTC 1 cut(s) 398
DseDI GACNNNNNNGTC 1 cut(s) 398
EaeI YGGCCR 1 cut(s) 61
Eam1104I CTCTTC 2 cut(s) 255, 291
EarI CTCTTC 2 cut(s) 255, 291
EciI GGCGGA 1 cut(s) 470
Eco130I CCWWGG 2 cut(s) 156, 606
Eco57I CTGAAG 1 cut(s) 434
EcoRII CCWGG 1 cut(s) 549
EcoT14I CCWWGG 2 cut(s) 156, 606
ErhI CCWWGG 2 cut(s) 156, 606
FaeI CATG 5 cut(s) 228, 528, 660, 671, 741
FatI CATG 5 cut(s) 224, 524, 656, 667, 737
FauNDI CATATG 1 cut(s) 772
FblI GTMKAC 1 cut(s) 485
Fnu4HI GCNGC 3 cut(s) 332, 381, 446
FokI GGATG 1 cut(s) 589
Fsp4HI GCNGC 3 cut(s) 332, 381, 446
FspBI CTAG 2 cut(s) 335, 722
GlaI GCGC 1 cut(s) 116
GluI GCNGC 3 cut(s) 332, 381, 446
HaeIII GGCC 1 cut(s) 63
HapII CCGG 3 cut(s) 60, 78, 203
HgaI GACGC 1 cut(s) 28
HhaI GCGC 1 cut(s) 117
Hin1II CATG 5 cut(s) 228, 528, 660, 671, 741
Hin6I GCGC 1 cut(s) 115
HinP1I GCGC 1 cut(s) 115
HindIII AAGCTT 1 cut(s) 307
HinfI GANTC 5 cut(s) 110, 320, 476, 529, 554
HpaII CCGG 3 cut(s) 60, 78, 203
HphI GGTGA 3 cut(s) 28, 91, 315
Hpy166II GTNNAC 2 cut(s) 163, 486
Hpy188I TCNGA 3 cut(s) 391, 465, 583
Hpy188III TCNNGA 1 cut(s) 203
Hpy8I GTNNAC 2 cut(s) 163, 486
Hpy99I CGWCG 1 cut(s) 92
HpyCH4IV ACGT 3 cut(s) 245, 399, 750
HpyCH4V TGCA 6 cut(s) 163, 278, 303, 383, 641, 745
HpyF10VI GCNNNNNNNGC 2 cut(s) 39, 412
HpyF3I CTNAG 1 cut(s) 327
HpySE526I ACGT 3 cut(s) 245, 399, 750
Hsp92II CATG 5 cut(s) 228, 528, 660, 671, 741
HspAI GCGC 1 cut(s) 115
Kpn2I TCCGGA 1 cut(s) 202
Kzo9I GATC 1 cut(s) 421
LmnI GCTCC 2 cut(s) 47, 86
Lsp1109I GCAGC 3 cut(s) 318, 367, 457
LweI GCATC 3 cut(s) 265, 524, 739
MaeI CTAG 2 cut(s) 335, 722
MaeII ACGT 3 cut(s) 245, 399, 750
MaeIII GTNAC 2 cut(s) 16, 212
MalI GATC 1 cut(s) 423
MboI GATC 1 cut(s) 421
MboII GAAGA 9 cut(s) 97, 117, 120, 272, 278, 284, 554, 642, 645
MhlI GDGCHC 2 cut(s) 165, 679
MluCI AATT 8 cut(s) 344, 431, 459, 577, 598, 662, 701, 758
MlyI GAGTC 1 cut(s) 104
MroI TCCGGA 1 cut(s) 202
MroXI GAANNNNTTC 1 cut(s) 319
MseI TTAA 3 cut(s) 597, 632, 726
MslI CAYNNNNRTG 1 cut(s) 672
MspA1I CMGCKG 1 cut(s) 331
MspI CCGG 3 cut(s) 60, 78, 203
MspR9I CCNGG 1 cut(s) 551
MvaI CCWGG 1 cut(s) 551
MvnI CGCG 1 cut(s) 115
MwoI GCNNNNNNNGC 2 cut(s) 39, 412
NdeI CATATG 1 cut(s) 772
NdeII GATC 1 cut(s) 421
NlaIII CATG 5 cut(s) 228, 528, 660, 671, 741
NlaIV GGNNCC 3 cut(s) 34, 82, 198
NmuCI GTSAC 2 cut(s) 16, 212
NspI RCATGY 1 cut(s) 228
PaqCI CACCTGC 1 cut(s) 47
PcsI WCGNNNNNNNCGW 1 cut(s) 119
PdmI GAANNNNTTC 1 cut(s) 319
PfeI GAWTC 4 cut(s) 320, 476, 529, 554
PkrI GCNGC 3 cut(s) 333, 382, 447
PleI GAGTC 1 cut(s) 104
PpsI GAGTC 1 cut(s) 104
Psp1406I AACGTT 1 cut(s) 245
Psp6I CCWGG 1 cut(s) 549
PspGI CCWGG 1 cut(s) 549
PspN4I GGNNCC 3 cut(s) 34, 82, 198
PvuII CAGCTG 1 cut(s) 331
RsaI GTAC 2 cut(s) 620, 749
RsaNI GTAC 2 cut(s) 619, 748
RseI CAYNNNNRTG 1 cut(s) 672
SaqAI TTAA 3 cut(s) 597, 632, 726
SatI GCNGC 3 cut(s) 332, 381, 446
Sau3AI GATC 1 cut(s) 421
SchI GAGTC 1 cut(s) 104
ScrFI CCNGG 1 cut(s) 551
SduI GDGCHC 2 cut(s) 165, 679
SfaNI GCATC 3 cut(s) 265, 524, 739
SfcI CTRYAG 1 cut(s) 782
SmiMI CAYNNNNRTG 1 cut(s) 672
SpeI ACTAGT 1 cut(s) 721
Sse9I AATT 8 cut(s) 344, 431, 459, 577, 598, 662, 701, 758
SsiI CCGC 3 cut(s) 234, 455, 513
SspI AATATT 1 cut(s) 637
SspMI CTAG 2 cut(s) 335, 722
StyD4I CCNGG 1 cut(s) 549
StyI CCWWGG 2 cut(s) 156, 606
TaiI ACGT 3 cut(s) 248, 402, 753
TaqI TCGA 3 cut(s) 24, 87, 108
TaqII GACCGA 1 cut(s) 200
TasI AATT 8 cut(s) 344, 431, 459, 577, 598, 662, 701, 758
TfiI GAWTC 4 cut(s) 320, 476, 529, 554
Tru1I TTAA 3 cut(s) 597, 632, 726
Tru9I TTAA 3 cut(s) 597, 632, 726
TscAI CASTG 2 cut(s) 225, 486
TseFI GTSAC 2 cut(s) 16, 212
TseI GCWGC 3 cut(s) 331, 380, 445
Tsp45I GTSAC 2 cut(s) 16, 212
TspDTI ATGAA 4 cut(s) 345, 591, 645, 726
TspGWI ACGGA 1 cut(s) 105
TspRI CASTG 2 cut(s) 225, 486
VneI GTGCAC 1 cut(s) 161
XapI RAATTY 2 cut(s) 459, 758
XceI RCATGY 1 cut(s) 228
XmiI GTMKAC 1 cut(s) 485
XmnI GAANNNNTTC 1 cut(s) 319
XspI CTAG 2 cut(s) 335, 722
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.