Rh7AG149600

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000558
Physical Location & Seq
Reverse (-)
12111624 .. 12113382
1759 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG149600.1

Sequence Viewer

Length: 708 bp
ATGGCAGCCGGCCACGTCGCCATTGTCCCAAGTCCAGGTTTAGGCCACCTCATTCCGCTCACCGAGCTGGCCAAACGACTCTTCGTCCACCACAACTTCACCGTCACCTTCTTCATCCCCAACGACGGCACGAACCTGACTCTGCAAAAGAAACTCCTGGAAGCTTTGCCGGAGACCATATCCTCCACCTTCCTCCCTCCCATCAACTTAGACGACGTCCCACCAGAATCGATGATGGAAACCAAGATCGCTCTCACCTTGACTCGGTCACTCTCCGCTATCCGCGACTCAGTTAAGGCCCTAGCGGAGTCGACTCGGCTGGTGGCGCTTGTTGTTGATGTCTTTGGTCTTGAGGCCTTTGATGTGGCCAATGAGCTCAATTTGCTGCCCTATCTTTTCTTTCCTTCTACGGCGATGGGTTTGTGGCTTGTGTTTGAGTTGCCAAAGCTTGACGAGACTACTACTTGTGAGTACAGGGATCTGCCTGAACCGGTCCGGCTTCCGGGTTGTGTGCCGCTACATGGCAGAGATTTTGTAGAAATTCTGAAAGATAGGAGCAATGTGGCGTATAAAGCCTTTCTTCGCATCGGCAAGAGGTACAAGTCCGCAGCTGGGATCATGATCAATAGCTTTGCGGATGTGGAACCAGGCGCTTTCAAGGCTTTCAAGGAACACAGACAAAGTCATGGTCTTCCATCGGACCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

235

Amino Acids

26.04

Weight (kDa)

6.17

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64350
fragaria_vesca FvH4_5g04160 FvH4_5g04161 FvH4_5g04200 FvH4_5g04210 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211
malus_domestica MD06G1103300.v1.1 MD06G1103400.v1.1 MD06G1103500.v1.1 MD06G1103600.v1.1 MD06G1103700.v1.1 MD06G1116200.v1.1 MD14G1122800.v1.1 MD14G1133100.v1.1
prunus_persica Prupe.5G116100_v2.0.a1 Prupe.5G116300_v2.0.a1 Prupe.I001100_v2.0.a1
pyrus_communis pycom03g16970 pycom06g09790 pycom06g09810 pycom06g09830 pycom06g09840
rosa_chinensis RchiOBHm_Chr7g0195271 RchiOBHm_Chr7g0195281 RchiOBHm_Chr7g0195291 RchiOBHm_Chr7g0195301 RchiOBHm_Chr7g0195311 RchiOBHm_Chr7g0222791
rosa_laevigata RLG00000004129 RLG00000004130 RLG00000004133 RLG00000004134 RLG00000004135
rosa_multiflora Rmu_co8481937.1_g000001 Rmu_sc0002381.1_g000002 Rmu_sc0002381.1_g000003 Rmu_sc0002381.1_g000007 Rmu_sc0002881.1_g000005 Rmu_sc0007366.1_g000001 Rmu_sc0011789.1_g000001 Rmu_sc0039338.1_g000002 Rmu_sc0039339.1_g000002
rosa_roxburghii Rroxscaffold_3G00235780 Rroxscaffold_3G00260600 Rroxscaffold_3G00260620 Rroxscaffold_3G00260630
rosa_rugosa Rorug07G0022200 Rorug07G0022300 Rorug07G0022400 Rorug07G0022500 Rorug07G0022600 Rorug07G0216900
rosa_samantha Rh7AG149300 Rh7AG149400 Rh7AG149500 Rh7AG149600 Rh7AG149700 Rh7AG356800 Rh7BG150500 Rh7BG150600 Rh7BG150700 Rh7BG150800 Rh7BG150900 Rh7BG151200 Rh7BG350700 Rh7CG154100 Rh7CG154200 Rh7CG154300 Rh7CG154700 Rh7CG374200 Rh7DG150500 Rh7DG150600 Rh7DG150700 Rh7DG150800 Rh7DG150900
rosa_wichuraiana Rw7G012750 Rw7G012760 Rw7G012770 Rw7G012780 Rw7G030260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 219
AccBSI CCGCTC 1 cut(s) 58
AccI GTMKAC 1 cut(s) 311
AccII CGCG 1 cut(s) 285
AciI CCGC 7 cut(s) 56, 276, 283, 305, 515, 606, 635
AclWI GGATC 2 cut(s) 486, 623
AcoI YGGCCR 3 cut(s) 10, 69, 366
AcsI RAATTY 1 cut(s) 540
AcyI GRCGYC 1 cut(s) 216
AfaI GTAC 2 cut(s) 473, 599
AfiI CCNNNNNNNGG 7 cut(s) 35, 41, 125, 264, 502, 521, 612
AgeI ACCGGT 2 cut(s) 490, 702
AgsI TTSAA 2 cut(s) 658, 667
AhdI GACNNNNNGTC 1 cut(s) 83
AjiI CACGTC 1 cut(s) 16
AjnI CCWGG 3 cut(s) 34, 156, 646
AjuI GAANNNNNNNTTGG 2 cut(s) 65, 97
AluBI AGCT 6 cut(s) 67, 164, 376, 448, 611, 630
AluI AGCT 6 cut(s) 67, 164, 376, 448, 611, 630
Alw21I GWGCWC 1 cut(s) 378
Alw26I GTCTC 2 cut(s) 167, 449
AlwI GGATC 2 cut(s) 486, 623
AoxI GGCC 6 cut(s) 10, 43, 69, 297, 354, 366
ApeKI GCWGC 3 cut(s) 5, 385, 608
ApoI RAATTY 1 cut(s) 540
ArsI GACNNNNNNTTYG 2 cut(s) 673, 705
AsiGI ACCGGT 2 cut(s) 490, 702
AspLEI GCGC 2 cut(s) 328, 653
AspS9I GGNCC 3 cut(s) 298, 493, 700
AsuC2I CCSGG 1 cut(s) 504
AsuHPI GGTGA 4 cut(s) 52, 91, 97, 247
AvaII GGWCC 2 cut(s) 493, 700
BalI TGGCCA 2 cut(s) 71, 368
BanII GRGCYC 1 cut(s) 378
BbsI GAAGAC 1 cut(s) 683
Bbv12I GWGCWC 1 cut(s) 378
BbvI GCAGC 3 cut(s) 17, 372, 620
BccI CCATC 4 cut(s) 209, 229, 409, 703
BceAI ACGGC 2 cut(s) 142, 426
BciT130I CCWGG 3 cut(s) 36, 158, 648
BclI TGATCA 1 cut(s) 621
BcnI CCSGG 1 cut(s) 504
BcoDI GTCTC 2 cut(s) 167, 449
BfaI CTAG 1 cut(s) 302
BfoI RGCGCY 2 cut(s) 329, 654
BisI GCNGC 4 cut(s) 6, 386, 515, 609
BlsI GCNGC 4 cut(s) 7, 387, 516, 610
Bme1390I CCNGG 4 cut(s) 36, 158, 504, 648
Bme18I GGWCC 2 cut(s) 493, 700
BmeRI GACNNNNNGTC 1 cut(s) 83
BmgBI CACGTC 1 cut(s) 16
BmgT120I GGNCC 3 cut(s) 298, 493, 700
BmiI GGNNCC 1 cut(s) 645
BmrFI CCNGG 4 cut(s) 36, 158, 504, 648
BmsI GCATC 1 cut(s) 594
BpiI GAAGAC 1 cut(s) 683
BpuEI CTTGAG 1 cut(s) 371
BpuMI CCSGG 1 cut(s) 504
Bsa29I ATCGAT 1 cut(s) 230
BsaBI GATNNNNATC 1 cut(s) 620
BsaHI GRCGYC 1 cut(s) 216
BsaI GGTCTC 1 cut(s) 167
BsaWI WCCGGW 2 cut(s) 490, 702
Bsc4I CCNNNNNNNGG 7 cut(s) 35, 41, 125, 264, 502, 521, 612
Bse118I RCCGGY 3 cut(s) 8, 490, 702
Bse3DI GCAATG 1 cut(s) 565
Bse8I GATNNNNATC 1 cut(s) 620
BseBI CCWGG 3 cut(s) 36, 158, 648
BseCI ATCGAT 1 cut(s) 230
BseGI GGATG 2 cut(s) 114, 643
BseJI GATNNNNATC 1 cut(s) 620
BseLI CCNNNNNNNGG 7 cut(s) 35, 41, 125, 264, 502, 521, 612
BseMI GCAATG 1 cut(s) 565
BseMII CTCAG 1 cut(s) 303
BseXI GCAGC 3 cut(s) 17, 372, 620
BseYI CCCAGC 1 cut(s) 611
Bsh1236I CGCG 1 cut(s) 285
BshFI GGCC 6 cut(s) 12, 45, 71, 299, 356, 368
BshTI ACCGGT 2 cut(s) 490, 702
BshVI ATCGAT 1 cut(s) 230
BsiHKAI GWGCWC 1 cut(s) 378
BsiSI CCGG 6 cut(s) 9, 170, 491, 496, 503, 703
BslFI GGGAC 2 cut(s) 11, 203
BslI CCNNNNNNNGG 7 cut(s) 35, 41, 125, 264, 502, 521, 612
BsmAI GTCTC 2 cut(s) 167, 449
BsmFI GGGAC 2 cut(s) 11, 203
BsnI GGCC 6 cut(s) 12, 45, 71, 299, 356, 368
Bso31I GGTCTC 1 cut(s) 167
Bsp1286I GDGCHC 1 cut(s) 378
Bsp143I GATC 4 cut(s) 246, 478, 615, 621
BspACI CCGC 7 cut(s) 56, 276, 283, 305, 515, 606, 635
BspANI GGCC 6 cut(s) 12, 45, 71, 299, 356, 368
BspCNI CTCAG 1 cut(s) 302
BspDI ATCGAT 1 cut(s) 230
BspFNI CGCG 1 cut(s) 285
BspHI TCATGA 1 cut(s) 618
BspLI GGNNCC 1 cut(s) 645
BspPI GGATC 2 cut(s) 486, 623
BspTNI GGTCTC 1 cut(s) 167
BsrBI CCGCTC 1 cut(s) 58
BsrDI GCAATG 1 cut(s) 565
BsrFI RCCGGY 3 cut(s) 8, 490, 702
BssAI RCCGGY 3 cut(s) 8, 490, 702
BssMI GATC 4 cut(s) 246, 478, 615, 621
BssNI GRCGYC 1 cut(s) 216
Bst2UI CCWGG 3 cut(s) 36, 158, 648
Bst4CI ACNGT 1 cut(s) 103
Bst6I CTCTTC 1 cut(s) 86
BstACI GRCGYC 1 cut(s) 216
BstC8I GCNNGC 2 cut(s) 10, 69
BstDEI CTNAG 2 cut(s) 208, 289
BstF5I GGATG 2 cut(s) 114, 643
BstFNI CGCG 1 cut(s) 285
BstH2I RGCGCY 2 cut(s) 329, 654
BstHHI GCGC 2 cut(s) 328, 653
BstKTI GATC 4 cut(s) 249, 481, 618, 624
BstMAI GTCTC 2 cut(s) 167, 449
BstMBI GATC 4 cut(s) 246, 478, 615, 621
BstMWI GCNNNNNNNGC 5 cut(s) 64, 325, 382, 572, 659
BstNI CCWGG 3 cut(s) 36, 158, 648
BstSCI CCNGG 4 cut(s) 34, 156, 502, 646
BstUI CGCG 1 cut(s) 285
BstV1I GCAGC 3 cut(s) 17, 372, 620
BstV2I GAAGAC 1 cut(s) 683
BstX2I RGATCY 1 cut(s) 478
BstYI RGATCY 1 cut(s) 478
Bsu15I ATCGAT 1 cut(s) 230
BsuRI GGCC 6 cut(s) 12, 45, 71, 299, 356, 368
BsuTUI ATCGAT 1 cut(s) 230
BtgZI GCGATG 1 cut(s) 428
BtrI CACGTC 1 cut(s) 16
BtsCI GGATG 2 cut(s) 114, 643
Cac8I GCNNGC 2 cut(s) 10, 69
CciI TCATGA 1 cut(s) 618
CfoI GCGC 2 cut(s) 328, 653
Cfr10I RCCGGY 3 cut(s) 8, 490, 702
Cfr13I GGNCC 3 cut(s) 298, 493, 700
ClaI ATCGAT 1 cut(s) 230
CpoI CGGWCCG 2 cut(s) 493, 700
Csp6I GTAC 2 cut(s) 472, 598
CspAI ACCGGT 2 cut(s) 490, 702
CspI CGGWCCG 2 cut(s) 493, 700
CviAII CATG 3 cut(s) 521, 619, 686
CviQI GTAC 2 cut(s) 472, 598
DdeI CTNAG 2 cut(s) 208, 289
DpnI GATC 4 cut(s) 248, 480, 617, 623
DpnII GATC 4 cut(s) 246, 478, 615, 621
DriI GACNNNNNGTC 1 cut(s) 83
EaeI YGGCCR 3 cut(s) 10, 69, 366
Eam1104I CTCTTC 1 cut(s) 86
Eam1105I GACNNNNNGTC 1 cut(s) 83
EarI CTCTTC 1 cut(s) 86
Ecl136II GAGCTC 1 cut(s) 376
Eco147I AGGCCT 1 cut(s) 356
Eco24I GRGCYC 1 cut(s) 378
Eco31I GGTCTC 1 cut(s) 167
Eco47I GGWCC 2 cut(s) 493, 700
Eco53kI GAGCTC 1 cut(s) 376
EcoICRI GAGCTC 1 cut(s) 376
EcoO109I RGGNCCY 1 cut(s) 298
EcoRII CCWGG 3 cut(s) 34, 156, 646
EcoT38I GRGCYC 1 cut(s) 378
FaeI CATG 3 cut(s) 524, 622, 689
FaiI YATR 5 cut(s) 179, 522, 570, 620, 687
FalI AAGNNNNNCTT 2 cut(s) 564, 596
FaqI GGGAC 2 cut(s) 11, 203
FatI CATG 3 cut(s) 520, 618, 685
FbaI TGATCA 1 cut(s) 621
FblI GTMKAC 1 cut(s) 311
Fnu4HI GCNGC 4 cut(s) 6, 386, 515, 609
FokI GGATG 2 cut(s) 101, 650
FriOI GRGCYC 1 cut(s) 378
Fsp4HI GCNGC 4 cut(s) 6, 386, 515, 609
FspBI CTAG 1 cut(s) 302
GlaI GCGC 2 cut(s) 327, 652
GluI GCNGC 4 cut(s) 6, 386, 515, 609
GsaI CCCAGC 1 cut(s) 615
HaeII RGCGCY 2 cut(s) 329, 654
HaeIII GGCC 6 cut(s) 12, 45, 71, 299, 356, 368
HapII CCGG 6 cut(s) 9, 170, 491, 496, 503, 703
HhaI GCGC 2 cut(s) 328, 653
Hin1I GRCGYC 1 cut(s) 216
Hin1II CATG 3 cut(s) 524, 622, 689
Hin6I GCGC 2 cut(s) 326, 651
HinP1I GCGC 2 cut(s) 326, 651
HincII GTYRAC 1 cut(s) 312
HindII GTYRAC 1 cut(s) 312
HindIII AAGCTT 2 cut(s) 162, 446
HinfI GANTC 7 cut(s) 78, 139, 227, 262, 287, 308, 313
HpaII CCGG 6 cut(s) 9, 170, 491, 496, 503, 703
HphI GGTGA 4 cut(s) 52, 91, 97, 247
Hpy166II GTNNAC 2 cut(s) 88, 312
Hpy188I TCNGA 2 cut(s) 546, 700
Hpy188III TCNNGA 2 cut(s) 350, 619
Hpy8I GTNNAC 2 cut(s) 88, 312
Hpy99I CGWCG 3 cut(s) 20, 128, 218
HpyAV CCTTC 3 cut(s) 118, 199, 414
HpyCH4III ACNGT 1 cut(s) 103
HpyCH4IV ACGT 2 cut(s) 15, 216
HpyCH4V TGCA 1 cut(s) 145
HpyF10VI GCNNNNNNNGC 5 cut(s) 64, 325, 382, 572, 659
HpyF3I CTNAG 2 cut(s) 208, 289
HpySE526I ACGT 2 cut(s) 15, 216
Hsp92I GRCGYC 1 cut(s) 216
Hsp92II CATG 3 cut(s) 524, 622, 689
HspAI GCGC 2 cut(s) 326, 651
KroI GCCGGC 1 cut(s) 8
KroNI GCCGGC 1 cut(s) 10
Ksp22I TGATCA 1 cut(s) 621
Kzo9I GATC 4 cut(s) 246, 478, 615, 621
LmnI GCTCC 1 cut(s) 555
Lsp1109I GCAGC 3 cut(s) 17, 372, 620
LweI GCATC 1 cut(s) 594
MaeI CTAG 1 cut(s) 302
MaeII ACGT 2 cut(s) 15, 216
MaeIII GTNAC 2 cut(s) 103, 267
MalI GATC 4 cut(s) 248, 480, 617, 623
MbiI CCGCTC 1 cut(s) 58
MboI GATC 4 cut(s) 246, 478, 615, 621
MboII GAAGA 4 cut(s) 73, 103, 572, 683
MflI RGATCY 1 cut(s) 478
MhlI GDGCHC 1 cut(s) 378
MlsI TGGCCA 2 cut(s) 71, 368
MluCI AATT 2 cut(s) 379, 540
MluNI TGGCCA 2 cut(s) 71, 368
MlyI GAGTC 6 cut(s) 72, 133, 256, 281, 307, 317
MnlI CCTC 6 cut(s) 59, 193, 203, 207, 346, 588
Mox20I TGGCCA 2 cut(s) 71, 368
MroNI GCCGGC 1 cut(s) 8
MscI TGGCCA 2 cut(s) 71, 368
MseI TTAA 1 cut(s) 294
Msp20I TGGCCA 2 cut(s) 71, 368
MspA1I CMGCKG 1 cut(s) 611
MspI CCGG 6 cut(s) 9, 170, 491, 496, 503, 703
MspR9I CCNGG 4 cut(s) 36, 158, 504, 648
MvaI CCWGG 3 cut(s) 36, 158, 648
MvnI CGCG 1 cut(s) 285
MwoI GCNNNNNNNGC 5 cut(s) 64, 325, 382, 572, 659
NaeI GCCGGC 1 cut(s) 10
NciI CCSGG 1 cut(s) 504
NdeII GATC 4 cut(s) 246, 478, 615, 621
NgoMIV GCCGGC 1 cut(s) 8
NlaIII CATG 3 cut(s) 524, 622, 689
NlaIV GGNNCC 1 cut(s) 645
NmeAIII GCCGAG 1 cut(s) 295
NmuCI GTSAC 2 cut(s) 103, 267
PagI TCATGA 1 cut(s) 618
PceI AGGCCT 1 cut(s) 356
PdiI GCCGGC 1 cut(s) 10
PfeI GAWTC 1 cut(s) 227
PflFI GACNNNGTC 3 cut(s) 215, 265, 681
PfoI TCCNGGA 1 cut(s) 156
PinAI ACCGGT 2 cut(s) 490, 702
PkrI GCNGC 4 cut(s) 7, 387, 516, 610
PleI GAGTC 6 cut(s) 72, 133, 256, 281, 307, 316
PpsI GAGTC 6 cut(s) 72, 133, 256, 281, 307, 316
Psp124BI GAGCTC 1 cut(s) 378
Psp6I CCWGG 3 cut(s) 34, 156, 646
PspFI CCCAGC 1 cut(s) 611
PspGI CCWGG 3 cut(s) 34, 156, 646
PspN4I GGNNCC 1 cut(s) 645
PspPI GGNCC 3 cut(s) 298, 493, 700
PsuI RGATCY 1 cut(s) 478
PsyI GACNNNGTC 3 cut(s) 215, 265, 681
PvuII CAGCTG 1 cut(s) 611
RsaI GTAC 2 cut(s) 473, 599
RsaNI GTAC 2 cut(s) 472, 598
Rsr2I CGGWCCG 2 cut(s) 493, 700
RsrII CGGWCCG 2 cut(s) 493, 700
SacI GAGCTC 1 cut(s) 378
SalI GTCGAC 1 cut(s) 310
SaqAI TTAA 1 cut(s) 294
SatI GCNGC 4 cut(s) 6, 386, 515, 609
Sau3AI GATC 4 cut(s) 246, 478, 615, 621
Sau96I GGNCC 3 cut(s) 298, 493, 700
SchI GAGTC 6 cut(s) 72, 133, 256, 281, 307, 317
ScrFI CCNGG 4 cut(s) 36, 158, 504, 648
SduI GDGCHC 1 cut(s) 378
SfaNI GCATC 1 cut(s) 594
SinI GGWCC 2 cut(s) 493, 700
SmlI CTYRAG 1 cut(s) 350
SmoI CTYRAG 1 cut(s) 350
Sse9I AATT 2 cut(s) 379, 540
SseBI AGGCCT 1 cut(s) 356
SsiI CCGC 7 cut(s) 56, 276, 283, 305, 515, 606, 635
SspMI CTAG 1 cut(s) 302
SstI GAGCTC 1 cut(s) 378
StuI AGGCCT 1 cut(s) 356
StyD4I CCNGG 4 cut(s) 34, 156, 502, 646
TaaI ACNGT 1 cut(s) 103
TaiI ACGT 2 cut(s) 18, 219
TaqI TCGA 2 cut(s) 230, 311
TaqII GACCGA 1 cut(s) 255
TasI AATT 2 cut(s) 379, 540
TatI WGTACW 1 cut(s) 471
TauI GCSGC 1 cut(s) 517
TfiI GAWTC 1 cut(s) 227
Tru1I TTAA 1 cut(s) 294
Tru9I TTAA 1 cut(s) 294
TseFI GTSAC 2 cut(s) 103, 267
TseI GCWGC 3 cut(s) 5, 385, 608
Tsp45I GTSAC 2 cut(s) 103, 267
TspDTI ATGAA 1 cut(s) 103
Tth111I GACNNNGTC 3 cut(s) 215, 265, 681
VpaK11BI GGWCC 2 cut(s) 493, 700
XapI RAATTY 1 cut(s) 540
XmiI GTMKAC 1 cut(s) 311
XspI CTAG 1 cut(s) 302
ZraI GACGTC 1 cut(s) 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.