Rw7G012750

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000558
Physical Location & Seq
Reverse (-)
12101299 .. 12107247
5949 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G012750.1

Sequence Viewer

Length: 2421 bp
ATGAAACCTCCCCATGTGGCCATTGTCCCAAGTCCAGGTATAGGTCATCTCATTCCCCTCGTTGAGCTAGCCAAACGACTTGTCGTCCACCACCACTTCAGCGTCACCTTTTTCATCCCCAGCGATGATGGATCAAACTTGACACCCCAAAGAAAAGTTCTGGATACCTTGCCCCAAACCATATCATCCACCTTTCTCCCTCCCGTAAACTTTGACGACCTCCCTAAGGACATTAAACACTTAACCAGAATCGCTCTCACCATGACTCGGTCCCTCCCTGCTCTTCGTGACTCGATCAAGGCCCTAGCCGAGTCGACTCGGCTGGTTGCCCTAGTGGTTGATCTTTTTGGTTGCGATGCTTTTGATATGGCTAAGGAATTTGATGTGCTTCCCTACATTTTTTACCCTACAAATGCTATGGTATTGTGGTTTCAGTTTGAATTGCCAAAGCTCGACCAGACCATTTCTTGTGAGTACAGAGATTTGCTTGAACCGGTCAAACTCCCGGGATGTGTGCCGATGCACGGTAAAAATTTGTTAGATTCGGTTCAAGATAGGACCAACCAAGCCTACAAAGTGCTTATTGACGTTTCTAAGAGGTACAAGTCGGCTGTTGGGATCATGATCAATAGCTTTGTGGATTTGCAACCGAGTGCTTTCAAGGCTTTCAAAGAACAAGGACAAGGTCTTGGCCTTCCACCAATTTACCCAGTCGGCCCGATAACAGAGATCGGCTCGACCAATGGGAATGATTGTTTGAGCTGGTTAGATAAGCAGCCTAATGGATCAGTGTTGTTTATTTCATTTGGGAGTGGTGGCACCATCTCAAGTGCACAAATGAATGAGTTGGCACTAGGTCTTGAAAAGAGTAGGGTGAGATTTCTTTGGAATTTCAAGTGTCCAAATGAGACATCAAAGAATGCAGCATATTTTGGTGTTCAAAGTTCGAATGATCTTTTATTTTTTCTACCCCGAGGGTTTTTGGAGAGAACCAAAGACGTAGGGTTAGTAGTGCCCTCATGGGCTCCTCAGGTCCCAATTTTAAGTCATGGCTCGACCGGCGGGTTTTTGACCCATTGTGGGTGGAACTCAACGCTAGAAAGCATTGTTCATGGTGTGCCTTTGGTTGCTTGGCCACTCTATGCAGATCAACGAATGAATGCAGTGTTGCTAGCTCAAGATTTGAAGGTGGCGTGGAGGGTTAAAATGAATGATAAGGGCATTGTGGAGAGTGAAGACATCGCCAAATATGCAAAGGGCCTAATTGAAGGAGAAGAAGGGAAAGTGCTCAAAAAGAGGATGATAGAGCTAAAAGAGGCATCCCAAGTGGCTTTGAGCCAAGATGGGTCTTCTACGAAATCACTTGCGGAGGTAGCTCAGATATGGAAGGATCACAAGAGCTATTTGATCCTCATCAGTACCTCCACGCACTTTACGACGGAGATGGAGAAATCTCTGGTGACGCTCGATAAAGGCACCACCTGCTCCTCTTGGAACTACTCCGGCCAGAGATTAGCCACCGGCTCCTTCGACGGAACTCTCACCATCTTCGACTCGCGCCACCCGTCTTCTTCCTCTTTCTCCTCCACCTCAAAATCCAAGGTGCACCACGCTTCTGCCATTGTCAAAGTTGTCTGGGTTCCTCCGGAGTTCGGTCACGCAGTGGCGTGTGTTTGCGGAGATGGAACGCTGTCGTTGTGGGAAGAGACTGTTGAAGATGCACAACCTCTTCAATGGAAGCTGTGCAAAAGCTTTAGAAGTGATTCAGCTCAGCTGCTAGATGTTCAATTTGGGGGTTCATCATCAAGTTTGAAAATGGTTGCTGCATATTCAGATGGCAATGTCAAGCTCTATGAGCTACTTGATCCATTGGAATTGAAGAACTGGCAGCTTCAGGCGGAAATTCAGAATGTTATTGATTCAGTATCTACACTTGGGAAAGCTGTATGCTTATCCGCATCTATATCATGGAATCCAACAGGAGGAGAAAGCCAGGAATCAAGTTTTGTTTTGGGTTTCAATTCAGACACTCTACAACTTAATTCAGCTAAGATATGGGAATTTGATCAAGCTCATCAAAGATGGCTCCCAGTTGCGGAATTGGCTTCTCCTAATGACAAGGGTGATCAGGTCTATGCGGTTGCCTGGGCACCAAACATTGGCAGGCCCTATGAGGTAATTGCTGTTGCCACTCAGAAGGGAATATCAATATGGCATCTTGGATTAAACCCTGACTCAGATGGAAGGCTCTCTTCAGAGAAGGTTGCACAACTTTCTGGTCACAAAGGCGAGGTCTGGCAACTGGAGTGGGACATGAGTGGAATGACATTGGCATCCACTGGGAACGATGGGGTAGTACGGTTGTGGCAGTCTAATTTGAATGGCACTTGGCATGAAGAAGCTACATTGGAACCCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

806

Amino Acids

88.66

Weight (kDa)

5.77

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 263 - 425 5.7e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Beta-prop_THOC3 PF25174 496 - 568 1.7e-07 THOC3 beta-propeller domain
Beta-prop_THOC3 PF25174 629 - 791 2e-06 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 681 - 790 1e-06 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 708 - 792 1.6e-06 CDC20/Fizzy WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64350
fragaria_vesca FvH4_5g04160 FvH4_5g04161 FvH4_5g04200 FvH4_5g04210 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211
malus_domestica MD06G1103300.v1.1 MD06G1103400.v1.1 MD06G1103500.v1.1 MD06G1103600.v1.1 MD06G1103700.v1.1 MD06G1116200.v1.1 MD14G1122800.v1.1 MD14G1133100.v1.1
prunus_persica Prupe.5G116100_v2.0.a1 Prupe.5G116300_v2.0.a1 Prupe.I001100_v2.0.a1
pyrus_communis pycom03g16970 pycom06g09790 pycom06g09810 pycom06g09830 pycom06g09840
rosa_chinensis RchiOBHm_Chr7g0195271 RchiOBHm_Chr7g0195281 RchiOBHm_Chr7g0195291 RchiOBHm_Chr7g0195301 RchiOBHm_Chr7g0195311 RchiOBHm_Chr7g0222791
rosa_laevigata RLG00000004129 RLG00000004130 RLG00000004133 RLG00000004134 RLG00000004135
rosa_multiflora Rmu_co8481937.1_g000001 Rmu_sc0002381.1_g000002 Rmu_sc0002381.1_g000003 Rmu_sc0002381.1_g000007 Rmu_sc0002881.1_g000005 Rmu_sc0007366.1_g000001 Rmu_sc0011789.1_g000001 Rmu_sc0039338.1_g000002 Rmu_sc0039339.1_g000002
rosa_roxburghii Rroxscaffold_3G00235780 Rroxscaffold_3G00260600 Rroxscaffold_3G00260620 Rroxscaffold_3G00260630
rosa_rugosa Rorug07G0022200 Rorug07G0022300 Rorug07G0022400 Rorug07G0022500 Rorug07G0022600 Rorug07G0216900
rosa_samantha Rh7AG149300 Rh7AG149400 Rh7AG149500 Rh7AG149600 Rh7AG149700 Rh7AG356800 Rh7BG150500 Rh7BG150600 Rh7BG150700 Rh7BG150800 Rh7BG150900 Rh7BG151200 Rh7BG350700 Rh7CG154100 Rh7CG154200 Rh7CG154300 Rh7CG154700 Rh7CG374200 Rh7DG150500 Rh7DG150600 Rh7DG150700 Rh7DG150800 Rh7DG150900
rosa_wichuraiana Rw7G012750 Rw7G012760 Rw7G012770 Rw7G012780 Rw7G030260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1490
Acc36I ACCTGC 1 cut(s) 1490
AccB1I GGYRCC 3 cut(s) 818, 1475, 2149
AccB7I CCANNNNNTGG 1 cut(s) 2159
AccI GTMKAC 1 cut(s) 314
AccII CGCG 1 cut(s) 1558
AccIII TCCGGA 1 cut(s) 1645
AciI CCGC 7 cut(s) 1062, 1367, 1677, 1898, 1956, 2096, 2138
AclWI GGATC 6 cut(s) 139, 626, 793, 1398, 1402, 1859
AcoI YGGCCR 3 cut(s) 18, 1133, 1504
AcsI RAATTY 5 cut(s) 377, 532, 889, 1902, 2060
AcuI CTGAAG 3 cut(s) 82, 1877, 2238
AdeI CACNNNGTG 1 cut(s) 1663
AfaI GTAC 4 cut(s) 476, 602, 1420, 2358
AgeI ACCGGT 1 cut(s) 493
AhdI GACNNNNNGTC 1 cut(s) 83
AjnI CCWGG 3 cut(s) 34, 1992, 2144
AjuI GAANNNNNNNTTGG 2 cut(s) 141, 173
Alw21I GWGCWC 3 cut(s) 835, 1290, 1608
Alw26I GTCTC 2 cut(s) 902, 1700
Alw44I GTGCAC 2 cut(s) 831, 1604
AlwI GGATC 6 cut(s) 139, 626, 793, 1398, 1402, 1859
Ama87I CYCGRG 2 cut(s) 505, 972
Aor13HI TCCGGA 1 cut(s) 1645
AoxI GGCC 8 cut(s) 18, 300, 691, 715, 1133, 1258, 1504, 2165
ApaLI GTGCAC 2 cut(s) 831, 1604
ApeKI GCWGC 5 cut(s) 775, 923, 1774, 1823, 1888
ApoI RAATTY 5 cut(s) 377, 532, 889, 1902, 2060
ArsI GACNNNNNNTTYG 4 cut(s) 66, 98, 2277, 2309
AsiGI ACCGGT 1 cut(s) 493
Asp700I GAANNNNTTC 1 cut(s) 1762
AspLEI GCGC 1 cut(s) 1560
AspS9I GGNCC 7 cut(s) 270, 301, 558, 716, 1033, 1258, 2166
AsuC2I CCSGG 2 cut(s) 506, 507
AsuHPI GGTGA 6 cut(s) 97, 250, 886, 1471, 1534, 2135
AsuII TTCGAA 1 cut(s) 947
AsuNHI GCTAGC 2 cut(s) 67, 1171
AvaI CYCGRG 2 cut(s) 505, 972
AvaII GGWCC 3 cut(s) 270, 558, 1033
AxyI CCTNAGG 2 cut(s) 225, 1029
BaeGI GKGCMC 4 cut(s) 835, 1017, 1608, 2152
BalI TGGCCA 2 cut(s) 20, 1135
BanI GGYRCC 3 cut(s) 818, 1475, 2149
BanII GRGCYC 1 cut(s) 1027
BbsI GAAGAC 3 cut(s) 1242, 1341, 1560
Bbv12I GWGCWC 3 cut(s) 835, 1290, 1608
BbvI GCAGC 5 cut(s) 787, 935, 1761, 1810, 1900
BciT130I CCWGG 3 cut(s) 36, 1994, 2146
BciVI GTATCC 1 cut(s) 157
BclI TGATCA 3 cut(s) 624, 2065, 2125
BcnI CCSGG 2 cut(s) 506, 507
BcoDI GTCTC 2 cut(s) 902, 1700
BfaI CTAG 7 cut(s) 68, 305, 332, 854, 1097, 1172, 1778
BfuAI ACCTGC 1 cut(s) 1490
BfuI GTATCC 1 cut(s) 157
BisI GCNGC 5 cut(s) 776, 924, 1775, 1824, 1889
BlpI GCTNAGC 1 cut(s) 1770
BlsI GCNGC 5 cut(s) 777, 925, 1776, 1825, 1890
Bme1390I CCNGG 5 cut(s) 36, 506, 507, 1994, 2146
Bme18I GGWCC 3 cut(s) 270, 558, 1033
BmeRI GACNNNNNGTC 1 cut(s) 83
BmeT110I CYCGRG 2 cut(s) 505, 972
BmgT120I GGNCC 7 cut(s) 270, 301, 558, 716, 1033, 1258, 2166
BmrFI CCNGG 5 cut(s) 36, 506, 507, 1994, 2146
BmrI ACTGGG 3 cut(s) 704, 2084, 2349
BmsI GCATC 7 cut(s) 346, 510, 1328, 1708, 1967, 2224, 2342
BmtI GCTAGC 2 cut(s) 71, 1175
BmuI ACTGGG 3 cut(s) 704, 2084, 2349
BpiI GAAGAC 3 cut(s) 1242, 1341, 1560
BplI GAGNNNNNCTC 2 cut(s) 719, 751
BpmI CTGGAG 1 cut(s) 2324
Bpu10I CCTNAGC 1 cut(s) 372
Bpu1102I GCTNAGC 1 cut(s) 1770
Bpu14I TTCGAA 1 cut(s) 947
BpuEI CTTGAG 2 cut(s) 811, 1161
BpuMI CCSGG 2 cut(s) 506, 507
BsaBI GATNNNNATC 2 cut(s) 623, 1412
BsaJI CCNNGG 4 cut(s) 505, 973, 1599, 2145
BsaWI WCCGGW 2 cut(s) 493, 1645
Bse118I RCCGGY 3 cut(s) 493, 1058, 1520
Bse1I ACTGG 5 cut(s) 710, 1889, 2090, 2307, 2344
Bse21I CCTNAGG 2 cut(s) 225, 1029
Bse3DI GCAATG 1 cut(s) 1846
Bse8I GATNNNNATC 2 cut(s) 623, 1412
BseAI TCCGGA 1 cut(s) 1645
BseBI CCWGG 3 cut(s) 36, 1994, 2146
BseDI CCNNGG 4 cut(s) 505, 973, 1599, 2145
BseGI GGATG 6 cut(s) 114, 185, 515, 1305, 1319, 2333
BseJI GATNNNNATC 2 cut(s) 623, 1412
BseMI GCAATG 1 cut(s) 1846
BseMII CTCAG 5 cut(s) 1043, 1391, 1784, 2207, 2250
BseNI ACTGG 5 cut(s) 710, 1889, 2090, 2307, 2344
BseRI GAGGAG 4 cut(s) 1017, 1477, 1573, 1998
BseSI GKGCMC 4 cut(s) 835, 1017, 1608, 2152
BseXI GCAGC 5 cut(s) 787, 935, 1761, 1810, 1900
BseYI CCCAGC 1 cut(s) 119
Bsh1236I CGCG 1 cut(s) 1558
Bsh1285I CGRYCG 1 cut(s) 1059
BshFI GGCC 8 cut(s) 20, 302, 693, 717, 1135, 1260, 1506, 2167
BshNI GGYRCC 3 cut(s) 818, 1475, 2149
BshTI ACCGGT 1 cut(s) 493
BsiEI CGRYCG 1 cut(s) 1059
BsiHKAI GWGCWC 3 cut(s) 835, 1290, 1608
BsiHKCI CYCGRG 2 cut(s) 505, 972
BsiSI CCGG 6 cut(s) 494, 506, 1059, 1503, 1521, 1646
BslFI GGGAC 4 cut(s) 11, 256, 1019, 2324
BsmAI GTCTC 2 cut(s) 902, 1700
BsmFI GGGAC 4 cut(s) 11, 256, 1019, 2324
BsmI GAATGC 2 cut(s) 925, 1165
BsnI GGCC 8 cut(s) 20, 302, 693, 717, 1135, 1260, 1506, 2167
BsoBI CYCGRG 2 cut(s) 505, 972
Bsp119I TTCGAA 1 cut(s) 947
Bsp1286I GDGCHC 6 cut(s) 835, 1017, 1027, 1290, 1608, 2152
Bsp13I TCCGGA 1 cut(s) 1645
Bsp1720I GCTNAGC 1 cut(s) 1770
BspACI CCGC 7 cut(s) 1062, 1367, 1677, 1898, 1956, 2096, 2138
BspANI GGCC 8 cut(s) 20, 302, 693, 717, 1135, 1260, 1506, 2167
BspCNI CTCAG 5 cut(s) 1042, 1390, 1783, 2206, 2249
BspEI TCCGGA 1 cut(s) 1645
BspFNI CGCG 1 cut(s) 1558
BspHI TCATGA 1 cut(s) 621
BspMI ACCTGC 1 cut(s) 1490
BspOI GCTAGC 2 cut(s) 71, 1175
BspPI GGATC 6 cut(s) 139, 626, 793, 1398, 1402, 1859
BspQI GCTCTTC 1 cut(s) 288
BspT104I TTCGAA 1 cut(s) 947
BspT107I GGYRCC 3 cut(s) 818, 1475, 2149
BsrDI GCAATG 1 cut(s) 1846
BsrFI RCCGGY 3 cut(s) 493, 1058, 1520
BsrI ACTGG 5 cut(s) 710, 1889, 2090, 2307, 2344
BssAI RCCGGY 3 cut(s) 493, 1058, 1520
BssECI CCNNGG 4 cut(s) 505, 973, 1599, 2145
BssT1I CCWWGG 1 cut(s) 1599
Bst2UI CCWGG 3 cut(s) 36, 1994, 2146
Bst4CI ACNGT 3 cut(s) 527, 1711, 2361
Bst6I CTCTTC 4 cut(s) 288, 1698, 1734, 2257
BstAPI GCANNNNNTGC 1 cut(s) 1482
BstBI TTCGAA 1 cut(s) 947
BstC8I GCNNGC 3 cut(s) 69, 1173, 2165
BstENI CCTNNNNNAGG 1 cut(s) 224
BstF5I GGATG 6 cut(s) 114, 185, 515, 1305, 1319, 2333
BstFNI CGCG 1 cut(s) 1558
BstHHI GCGC 1 cut(s) 1560
BstMAI GTCTC 2 cut(s) 902, 1700
BstMCI CGRYCG 1 cut(s) 1059
BstMWI GCNNNNNNNGC 7 cut(s) 662, 1059, 1250, 1373, 1482, 1855, 2102
BstNI CCWGG 3 cut(s) 36, 1994, 2146
BstSCI CCNGG 5 cut(s) 34, 504, 505, 1992, 2144
BstSLI GKGCMC 4 cut(s) 835, 1017, 1608, 2152
BstUI CGCG 1 cut(s) 1558
BstV1I GCAGC 5 cut(s) 787, 935, 1761, 1810, 1900
BstV2I GAAGAC 3 cut(s) 1242, 1341, 1560
Bsu36I CCTNAGG 2 cut(s) 225, 1029
BsuI GTATCC 1 cut(s) 157
BsuRI GGCC 8 cut(s) 20, 302, 693, 717, 1135, 1260, 1506, 2167
BtgZI GCGATG 3 cut(s) 138, 369, 1225
BtsCI GGATG 6 cut(s) 114, 185, 515, 1305, 1319, 2333
BtsI GCAGTG 2 cut(s) 1170, 1668
BtsIMutI CAGTG 4 cut(s) 795, 1170, 1668, 2337
BveI ACCTGC 1 cut(s) 1490
Cac8I GCNNGC 3 cut(s) 69, 1173, 2165
CciI TCATGA 1 cut(s) 621
CfoI GCGC 1 cut(s) 1560
Cfr10I RCCGGY 3 cut(s) 493, 1058, 1520
Cfr13I GGNCC 7 cut(s) 270, 301, 558, 716, 1033, 1258, 2166
Cfr9I CCCGGG 1 cut(s) 505
CseI GACGC 2 cut(s) 91, 1471
Csp6I GTAC 4 cut(s) 475, 601, 1419, 2357
CspAI ACCGGT 1 cut(s) 493
CspCI CAANNNNNGTGG 2 cut(s) 2288, 2323
CviAII CATG 9 cut(s) 14, 262, 622, 1020, 1049, 1112, 1968, 2314, 2393
CviQI GTAC 4 cut(s) 475, 601, 1419, 2357
DraIII CACNNNGTG 1 cut(s) 1663
DriI GACNNNNNGTC 1 cut(s) 83
EaeI YGGCCR 3 cut(s) 18, 1133, 1504
Eam1104I CTCTTC 4 cut(s) 288, 1698, 1734, 2257
Eam1105I GACNNNNNGTC 1 cut(s) 83
EarI CTCTTC 4 cut(s) 288, 1698, 1734, 2257
EciI GGCGGA 1 cut(s) 1913
Eco130I CCWWGG 1 cut(s) 1599
Eco24I GRGCYC 1 cut(s) 1027
Eco47I GGWCC 3 cut(s) 270, 558, 1033
Eco57I CTGAAG 3 cut(s) 82, 1877, 2238
Eco81I CCTNAGG 2 cut(s) 225, 1029
Eco88I CYCGRG 2 cut(s) 505, 972
EcoNI CCTNNNNNAGG 1 cut(s) 224
EcoO109I RGGNCCY 4 cut(s) 301, 1033, 1258, 2166
EcoRII CCWGG 3 cut(s) 34, 1992, 2144
EcoT14I CCWWGG 1 cut(s) 1599
EcoT38I GRGCYC 1 cut(s) 1027
ErhI CCWWGG 1 cut(s) 1599
FaeI CATG 9 cut(s) 17, 265, 625, 1023, 1052, 1115, 1971, 2317, 2396
FalI AAGNNNNNCTT 2 cut(s) 2236, 2268
FaqI GGGAC 4 cut(s) 11, 256, 1019, 2324
FatI CATG 9 cut(s) 13, 261, 621, 1019, 1048, 1111, 1967, 2313, 2392
FauI CCCGC 1 cut(s) 1055
FbaI TGATCA 3 cut(s) 624, 2065, 2125
FblI GTMKAC 1 cut(s) 314
Fnu4HI GCNGC 5 cut(s) 776, 924, 1775, 1824, 1889
FokI GGATG 6 cut(s) 101, 172, 522, 1306, 1312, 2320
FriOI GRGCYC 1 cut(s) 1027
Fsp4HI GCNGC 5 cut(s) 776, 924, 1775, 1824, 1889
FspBI CTAG 7 cut(s) 68, 305, 332, 854, 1097, 1172, 1778
GlaI GCGC 1 cut(s) 1559
GluI GCNGC 5 cut(s) 776, 924, 1775, 1824, 1889
GsaI CCCAGC 1 cut(s) 123
GsuI CTGGAG 1 cut(s) 2324
HaeIII GGCC 8 cut(s) 20, 302, 693, 717, 1135, 1260, 1506, 2167
HapII CCGG 6 cut(s) 494, 506, 1059, 1503, 1521, 1646
HgaI GACGC 2 cut(s) 91, 1471
HhaI GCGC 1 cut(s) 1560
Hin1II CATG 9 cut(s) 17, 265, 625, 1023, 1052, 1115, 1971, 2317, 2396
Hin6I GCGC 1 cut(s) 1558
HinP1I GCGC 1 cut(s) 1558
HincII GTYRAC 1 cut(s) 315
HindII GTYRAC 1 cut(s) 315
HindIII AAGCTT 1 cut(s) 1750
HpaII CCGG 6 cut(s) 494, 506, 1059, 1503, 1521, 1646
HphI GGTGA 6 cut(s) 97, 250, 886, 1471, 1534, 2135
Hpy166II GTNNAC 5 cut(s) 88, 208, 315, 833, 1606
Hpy188I TCNGA 7 cut(s) 1380, 1834, 1908, 2026, 2196, 2239, 2257
Hpy188III TCNNGA 7 cut(s) 161, 287, 551, 622, 860, 1178, 1646
Hpy8I GTNNAC 5 cut(s) 88, 208, 315, 833, 1606
Hpy99I CGWCG 2 cut(s) 1441, 1535
HpyAV CCTTC 9 cut(s) 704, 1180, 1262, 1271, 1381, 1537, 2191, 2238, 2254
HpyCH4III ACNGT 3 cut(s) 527, 1711, 2361
HpyCH4IV ACGT 2 cut(s) 588, 999
HpyF10VI GCNNNNNNNGC 7 cut(s) 662, 1059, 1250, 1373, 1482, 1855, 2102
HpySE526I ACGT 2 cut(s) 588, 999
Hsp92II CATG 9 cut(s) 17, 265, 625, 1023, 1052, 1115, 1971, 2317, 2396
HspAI GCGC 1 cut(s) 1558
Kpn2I TCCGGA 1 cut(s) 1645
Ksp22I TGATCA 3 cut(s) 624, 2065, 2125
LguI GCTCTTC 1 cut(s) 288
LmnI GCTCC 4 cut(s) 1030, 1490, 1529, 2091
Lsp1109I GCAGC 5 cut(s) 787, 935, 1761, 1810, 1900
LweI GCATC 7 cut(s) 346, 510, 1328, 1708, 1967, 2224, 2342
MaeI CTAG 7 cut(s) 68, 305, 332, 854, 1097, 1172, 1778
MaeII ACGT 2 cut(s) 588, 999
MaeIII GTNAC 5 cut(s) 103, 287, 1459, 1655, 2279
MhlI GDGCHC 6 cut(s) 835, 1017, 1027, 1290, 1608, 2152
MlsI TGGCCA 2 cut(s) 20, 1135
MluNI TGGCCA 2 cut(s) 20, 1135
MlyI GAGTC 6 cut(s) 259, 284, 310, 320, 1547, 2228
MmeI TCCRAC 1 cut(s) 2000
Mox20I TGGCCA 2 cut(s) 20, 1135
MroI TCCGGA 1 cut(s) 1645
MroXI GAANNNNTTC 1 cut(s) 1762
MscI TGGCCA 2 cut(s) 20, 1135
MseI TTAA 6 cut(s) 234, 242, 1043, 1203, 2040, 2225
Msp20I TGGCCA 2 cut(s) 20, 1135
MspA1I CMGCKG 1 cut(s) 1774
MspI CCGG 6 cut(s) 494, 506, 1059, 1503, 1521, 1646
MspR9I CCNGG 5 cut(s) 36, 506, 507, 1994, 2146
Mva1269I GAATGC 2 cut(s) 925, 1165
MvaI CCWGG 3 cut(s) 36, 1994, 2146
MvnI CGCG 1 cut(s) 1558
MwoI GCNNNNNNNGC 7 cut(s) 662, 1059, 1250, 1373, 1482, 1855, 2102
NciI CCSGG 2 cut(s) 506, 507
NheI GCTAGC 2 cut(s) 67, 1171
NlaIII CATG 9 cut(s) 17, 265, 625, 1023, 1052, 1115, 1971, 2317, 2396
NmeAIII GCCGAG 2 cut(s) 298, 334
NmuCI GTSAC 5 cut(s) 103, 287, 1459, 1655, 2279
NspV TTCGAA 1 cut(s) 947
PagI TCATGA 1 cut(s) 621
PaqCI CACCTGC 1 cut(s) 1490
PciSI GCTCTTC 1 cut(s) 288
PcsI WCGNNNNNNNCGW 2 cut(s) 1433, 1562
PctI GAATGC 2 cut(s) 925, 1165
PdmI GAANNNNTTC 1 cut(s) 1762
PfeI GAWTC 6 cut(s) 249, 542, 1763, 1919, 1972, 1997
PflFI GACNNNGTC 2 cut(s) 268, 684
PflMI CCANNNNNTGG 1 cut(s) 2159
PinAI ACCGGT 1 cut(s) 493
PkrI GCNGC 5 cut(s) 777, 925, 1776, 1825, 1890
PleI GAGTC 6 cut(s) 259, 284, 310, 319, 1547, 2228
PpsI GAGTC 6 cut(s) 259, 284, 310, 319, 1547, 2228
PpuMI RGGWCCY 1 cut(s) 1033
Psp5II RGGWCCY 1 cut(s) 1033
Psp6I CCWGG 3 cut(s) 34, 1992, 2144
PspFI CCCAGC 1 cut(s) 119
PspGI CCWGG 3 cut(s) 34, 1992, 2144
PspPI GGNCC 7 cut(s) 270, 301, 558, 716, 1033, 1258, 2166
PspPPI RGGWCCY 1 cut(s) 1033
PsyI GACNNNGTC 2 cut(s) 268, 684
PvuII CAGCTG 1 cut(s) 1774
RsaI GTAC 4 cut(s) 476, 602, 1420, 2358
RsaNI GTAC 4 cut(s) 475, 601, 1419, 2357
SalI GTCGAC 1 cut(s) 313
SapI GCTCTTC 1 cut(s) 288
SaqAI TTAA 6 cut(s) 234, 242, 1043, 1203, 2040, 2225
SatI GCNGC 5 cut(s) 776, 924, 1775, 1824, 1889
Sau96I GGNCC 7 cut(s) 270, 301, 558, 716, 1033, 1258, 2166
SchI GAGTC 6 cut(s) 259, 284, 310, 320, 1547, 2228
ScrFI CCNGG 5 cut(s) 36, 506, 507, 1994, 2146
SduI GDGCHC 6 cut(s) 835, 1017, 1027, 1290, 1608, 2152
SfaNI GCATC 7 cut(s) 346, 510, 1328, 1708, 1967, 2224, 2342
SfuI TTCGAA 1 cut(s) 947
SinI GGWCC 3 cut(s) 270, 558, 1033
SmaI CCCGGG 1 cut(s) 507
SmlI CTYRAG 2 cut(s) 826, 1176
SmoI CTYRAG 2 cut(s) 826, 1176
SsiI CCGC 7 cut(s) 1062, 1367, 1677, 1898, 1956, 2096, 2138
SspMI CTAG 7 cut(s) 68, 305, 332, 854, 1097, 1172, 1778
StyD4I CCNGG 5 cut(s) 34, 504, 505, 1992, 2144
StyI CCWWGG 1 cut(s) 1599
TaaI ACNGT 3 cut(s) 527, 1711, 2361
TaiI ACGT 2 cut(s) 591, 1002
TaqI TCGA 9 cut(s) 293, 314, 453, 737, 947, 1055, 1467, 1530, 1551
TaqII GACCGA 2 cut(s) 258, 1643
TatI WGTACW 1 cut(s) 474
TfiI GAWTC 6 cut(s) 249, 542, 1763, 1919, 1972, 1997
Tru1I TTAA 6 cut(s) 234, 242, 1043, 1203, 2040, 2225
Tru9I TTAA 6 cut(s) 234, 242, 1043, 1203, 2040, 2225
TscAI CASTG 4 cut(s) 795, 1170, 1668, 2344
TseFI GTSAC 5 cut(s) 103, 287, 1459, 1655, 2279
TseI GCWGC 5 cut(s) 775, 923, 1774, 1823, 1888
Tsp45I GTSAC 5 cut(s) 103, 287, 1459, 1655, 2279
TspDTI ATGAA 9 cut(s) 17, 103, 792, 854, 1100, 1172, 1223, 1788, 2409
TspGWI ACGGA 2 cut(s) 1454, 1548
TspMI CCCGGG 1 cut(s) 505
TspRI CASTG 4 cut(s) 795, 1170, 1668, 2344
Tth111I GACNNNGTC 2 cut(s) 268, 684
Van91I CCANNNNNTGG 1 cut(s) 2159
VneI GTGCAC 2 cut(s) 831, 1604
VpaK11BI GGWCC 3 cut(s) 270, 558, 1033
XagI CCTNNNNNAGG 1 cut(s) 224
XapI RAATTY 5 cut(s) 377, 532, 889, 1902, 2060
XmaI CCCGGG 1 cut(s) 505
XmiI GTMKAC 1 cut(s) 314
XmnI GAANNNNTTC 1 cut(s) 1762
XspI CTAG 7 cut(s) 68, 305, 332, 854, 1097, 1172, 1778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.