Rmu_co8481937.1_g000001

transferase activity, transferring hexosyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8481937.1
OG0000558
Physical Location & Seq
Forward (+)
720 .. 2123
1404 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8481937.1_g000001.1.cds

Sequence Viewer

Length: 1404 bp
atgaaacctccccatgtggccattgtcccaagtccaggtataggtcatctcattcccctcgttgagctagccaaacgacttgtcgtccaccaccacttcagcgtcacctttttcatccccagcgatgatggatcaaacttgacaccccaaagaaaagttctggataccttgccccaaaccatatcatccacctttctccctcccgtaaactttgacgacctccctaaggacattaagcacttaaccagaatcgctctcaccatgactcggtccctccctgctcttcgtgactcgatcaaggccctagccgagtcgactcggctggttgccctagtggttgatctttttggttgcgatgcttttgatatggctaaggaatttgatgtgcttccctacattttttaccctacaaatgctatggtattgtggtttcagtttgaattgccaaagctcgaccagaccatttcttgtgagtacagagatttgcttgaaccggtcaaactcccgggatgtgtgccgatgcacggtaaaaatttgttagattcggttcaagataggaccaaccaagcctacaaagtgcttattgacgtttctaagaggtacaagtcggctgttgggatcatgatcaatagctttgtggatttgcaaccgagtgctttcaaggctttcaaagaacaaggacaaggtcttggccttccaccaatttacccagtcggcccgataacagagatcggctcgaccaatgggaatgattgtttgagctggttagataagcagcctaatggatcagtgttgtttatttcatttgggagtggtggcaccatctcaagtgcacaaatgaatgagttggcactaggtcttgaaaagagtagggtgagatttctttggaatttcaagtgtccaaatgagacatcaaagaatgcagcatattttggtgttcaaagttcgaatgatcttttattttttctaccccgagggtttttggagagaaccaaagacgtagggttagtagtgccctcatgggctcctcaggtcccaattttaagtcatggctcgaccggcgggtttttgacccattgtgggtggaactcaacgctagaaagcattgttcatggtgtgcctttggttgcttggccactctatgcagatcaacgaatgaatgcagtgttgctagctcaagatttgaaggtggcgtggagggttaaaatgaatgataagggcattgtggagagtgaagacatcgccaaatatgcaaagggcctaattgaaggagaagaagggaaagtgctcaaaaagaggatgatagagctaaaagaggcatcccaagtggctttgagccaagatgggtcttctacgaaatcacttgcggaggtagctcagatatggaaggatcacaagaactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

467

Amino Acids

51.66

Weight (kDa)

7.16

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64350
fragaria_vesca FvH4_5g04160 FvH4_5g04161 FvH4_5g04200 FvH4_5g04210 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211
malus_domestica MD06G1103300.v1.1 MD06G1103400.v1.1 MD06G1103500.v1.1 MD06G1103600.v1.1 MD06G1103700.v1.1 MD06G1116200.v1.1 MD14G1122800.v1.1 MD14G1133100.v1.1
prunus_persica Prupe.5G116100_v2.0.a1 Prupe.5G116300_v2.0.a1 Prupe.I001100_v2.0.a1
pyrus_communis pycom03g16970 pycom06g09790 pycom06g09810 pycom06g09830 pycom06g09840
rosa_chinensis RchiOBHm_Chr7g0195271 RchiOBHm_Chr7g0195281 RchiOBHm_Chr7g0195291 RchiOBHm_Chr7g0195301 RchiOBHm_Chr7g0195311 RchiOBHm_Chr7g0222791
rosa_laevigata RLG00000004129 RLG00000004130 RLG00000004133 RLG00000004134 RLG00000004135
rosa_multiflora Rmu_co8481937.1_g000001 Rmu_sc0002381.1_g000002 Rmu_sc0002381.1_g000003 Rmu_sc0002381.1_g000007 Rmu_sc0002881.1_g000005 Rmu_sc0007366.1_g000001 Rmu_sc0011789.1_g000001 Rmu_sc0039338.1_g000002 Rmu_sc0039339.1_g000002
rosa_roxburghii Rroxscaffold_3G00235780 Rroxscaffold_3G00260600 Rroxscaffold_3G00260620 Rroxscaffold_3G00260630
rosa_rugosa Rorug07G0022200 Rorug07G0022300 Rorug07G0022400 Rorug07G0022500 Rorug07G0022600 Rorug07G0216900
rosa_samantha Rh7AG149300 Rh7AG149400 Rh7AG149500 Rh7AG149600 Rh7AG149700 Rh7AG356800 Rh7BG150500 Rh7BG150600 Rh7BG150700 Rh7BG150800 Rh7BG150900 Rh7BG151200 Rh7BG350700 Rh7CG154100 Rh7CG154200 Rh7CG154300 Rh7CG154700 Rh7CG374200 Rh7DG150500 Rh7DG150600 Rh7DG150700 Rh7DG150800 Rh7DG150900
rosa_wichuraiana Rw7G012750 Rw7G012760 Rw7G012770 Rw7G012780 Rw7G030260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 818
AccI GTMKAC 1 cut(s) 314
AciI CCGC 2 cut(s) 1062, 1367
AclWI GGATC 4 cut(s) 139, 626, 793, 1398
AcoI YGGCCR 2 cut(s) 18, 1133
AcsI RAATTY 3 cut(s) 377, 532, 889
AcuI CTGAAG 1 cut(s) 82
AfaI GTAC 2 cut(s) 476, 602
AfiI CCNNNNNNNGG 6 cut(s) 35, 41, 226, 267, 524, 1080
AgeI ACCGGT 1 cut(s) 493
AhdI GACNNNNNGTC 1 cut(s) 83
AjnI CCWGG 1 cut(s) 34
AjuI GAANNNNNNNTTGG 2 cut(s) 141, 173
AluBI AGCT 7 cut(s) 67, 451, 633, 762, 1175, 1309, 1376
AluI AGCT 7 cut(s) 67, 451, 633, 762, 1175, 1309, 1376
Alw21I GWGCWC 2 cut(s) 835, 1290
Alw26I GTCTC 1 cut(s) 902
Alw44I GTGCAC 1 cut(s) 831
AlwI GGATC 4 cut(s) 139, 626, 793, 1398
Ama87I CYCGRG 2 cut(s) 505, 972
AoxI GGCC 6 cut(s) 18, 300, 691, 715, 1133, 1258
ApaLI GTGCAC 1 cut(s) 831
ApeKI GCWGC 2 cut(s) 775, 923
ApoI RAATTY 3 cut(s) 377, 532, 889
ArsI GACNNNNNNTTYG 2 cut(s) 66, 98
AsiGI ACCGGT 1 cut(s) 493
AspS9I GGNCC 6 cut(s) 270, 301, 558, 716, 1033, 1258
AsuC2I CCSGG 2 cut(s) 506, 507
AsuHPI GGTGA 3 cut(s) 97, 250, 886
AsuII TTCGAA 1 cut(s) 947
AsuNHI GCTAGC 2 cut(s) 67, 1171
AvaI CYCGRG 2 cut(s) 505, 972
AvaII GGWCC 3 cut(s) 270, 558, 1033
AxyI CCTNAGG 2 cut(s) 225, 1029
BaeGI GKGCMC 2 cut(s) 835, 1017
BalI TGGCCA 2 cut(s) 20, 1135
BanI GGYRCC 1 cut(s) 818
BanII GRGCYC 1 cut(s) 1027
BbsI GAAGAC 2 cut(s) 1242, 1341
Bbv12I GWGCWC 2 cut(s) 835, 1290
BbvI GCAGC 2 cut(s) 787, 935
BccI CCATC 3 cut(s) 122, 830, 1337
BciT130I CCWGG 1 cut(s) 36
BciVI GTATCC 1 cut(s) 157
BclI TGATCA 1 cut(s) 624
BcnI CCSGG 2 cut(s) 506, 507
BcoDI GTCTC 1 cut(s) 902
BfaI CTAG 7 cut(s) 68, 305, 332, 854, 1097, 1172, 1402
BfuI GTATCC 1 cut(s) 157
BisI GCNGC 2 cut(s) 776, 924
BlsI GCNGC 2 cut(s) 777, 925
Bme1390I CCNGG 3 cut(s) 36, 506, 507
Bme18I GGWCC 3 cut(s) 270, 558, 1033
BmeRI GACNNNNNGTC 1 cut(s) 83
BmeT110I CYCGRG 2 cut(s) 505, 972
BmgT120I GGNCC 6 cut(s) 270, 301, 558, 716, 1033, 1258
BmiI GGNNCC 4 cut(s) 272, 820, 1026, 1035
BmrFI CCNGG 3 cut(s) 36, 506, 507
BmrI ACTGGG 1 cut(s) 704
BmsI GCATC 3 cut(s) 346, 510, 1328
BmtI GCTAGC 2 cut(s) 71, 1175
BmuI ACTGGG 1 cut(s) 704
BpiI GAAGAC 2 cut(s) 1242, 1341
BplI GAGNNNNNCTC 2 cut(s) 719, 751
Bpu10I CCTNAGC 1 cut(s) 372
Bpu14I TTCGAA 1 cut(s) 947
BpuEI CTTGAG 2 cut(s) 811, 1161
BpuMI CCSGG 2 cut(s) 506, 507
BsaBI GATNNNNATC 1 cut(s) 623
BsaJI CCNNGG 2 cut(s) 505, 973
BsaWI WCCGGW 1 cut(s) 493
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 41, 226, 267, 524, 1080
Bse118I RCCGGY 2 cut(s) 493, 1058
Bse1I ACTGG 1 cut(s) 710
Bse21I CCTNAGG 2 cut(s) 225, 1029
Bse8I GATNNNNATC 1 cut(s) 623
BseBI CCWGG 1 cut(s) 36
BseDI CCNNGG 2 cut(s) 505, 973
BseGI GGATG 5 cut(s) 114, 185, 515, 1305, 1319
BseJI GATNNNNATC 1 cut(s) 623
BseLI CCNNNNNNNGG 6 cut(s) 35, 41, 226, 267, 524, 1080
BseMII CTCAG 2 cut(s) 1043, 1391
BseNI ACTGG 1 cut(s) 710
BseRI GAGGAG 1 cut(s) 1017
BseSI GKGCMC 2 cut(s) 835, 1017
BseXI GCAGC 2 cut(s) 787, 935
BseYI CCCAGC 1 cut(s) 119
Bsh1285I CGRYCG 1 cut(s) 1059
BshFI GGCC 6 cut(s) 20, 302, 693, 717, 1135, 1260
BshNI GGYRCC 1 cut(s) 818
BshTI ACCGGT 1 cut(s) 493
BsiEI CGRYCG 1 cut(s) 1059
BsiHKAI GWGCWC 2 cut(s) 835, 1290
BsiHKCI CYCGRG 2 cut(s) 505, 972
BsiSI CCGG 3 cut(s) 494, 506, 1059
BslFI GGGAC 3 cut(s) 11, 256, 1019
BslI CCNNNNNNNGG 6 cut(s) 35, 41, 226, 267, 524, 1080
BsmAI GTCTC 1 cut(s) 902
BsmFI GGGAC 3 cut(s) 11, 256, 1019
BsmI GAATGC 2 cut(s) 925, 1165
BsnI GGCC 6 cut(s) 20, 302, 693, 717, 1135, 1260
BsoBI CYCGRG 2 cut(s) 505, 972
Bsp119I TTCGAA 1 cut(s) 947
Bsp1286I GDGCHC 4 cut(s) 835, 1017, 1027, 1290
BspACI CCGC 2 cut(s) 1062, 1367
BspANI GGCC 6 cut(s) 20, 302, 693, 717, 1135, 1260
BspCNI CTCAG 2 cut(s) 1042, 1390
BspHI TCATGA 1 cut(s) 621
BspLI GGNNCC 4 cut(s) 272, 820, 1026, 1035
BspOI GCTAGC 2 cut(s) 71, 1175
BspPI GGATC 4 cut(s) 139, 626, 793, 1398
BspQI GCTCTTC 1 cut(s) 288
BspT104I TTCGAA 1 cut(s) 947
BspT107I GGYRCC 1 cut(s) 818
BsrFI RCCGGY 2 cut(s) 493, 1058
BsrI ACTGG 1 cut(s) 710
BssAI RCCGGY 2 cut(s) 493, 1058
BssECI CCNNGG 2 cut(s) 505, 973
Bst2UI CCWGG 1 cut(s) 36
Bst4CI ACNGT 1 cut(s) 527
Bst6I CTCTTC 1 cut(s) 288
BstBI TTCGAA 1 cut(s) 947
BstC8I GCNNGC 2 cut(s) 69, 1173
BstDEI CTNAG 5 cut(s) 225, 372, 594, 1029, 1377
BstENI CCTNNNNNAGG 1 cut(s) 224
BstF5I GGATG 5 cut(s) 114, 185, 515, 1305, 1319
BstMAI GTCTC 1 cut(s) 902
BstMCI CGRYCG 1 cut(s) 1059
BstMWI GCNNNNNNNGC 4 cut(s) 662, 1059, 1250, 1373
BstNI CCWGG 1 cut(s) 36
BstSCI CCNGG 3 cut(s) 34, 504, 505
BstSLI GKGCMC 2 cut(s) 835, 1017
BstV1I GCAGC 2 cut(s) 787, 935
BstV2I GAAGAC 2 cut(s) 1242, 1341
Bsu36I CCTNAGG 2 cut(s) 225, 1029
BsuI GTATCC 1 cut(s) 157
BsuRI GGCC 6 cut(s) 20, 302, 693, 717, 1135, 1260
BtgZI GCGATG 3 cut(s) 138, 369, 1225
BtsCI GGATG 5 cut(s) 114, 185, 515, 1305, 1319
BtsI GCAGTG 1 cut(s) 1170
BtsIMutI CAGTG 2 cut(s) 795, 1170
Cac8I GCNNGC 2 cut(s) 69, 1173
CciI TCATGA 1 cut(s) 621
Cfr10I RCCGGY 2 cut(s) 493, 1058
Cfr13I GGNCC 6 cut(s) 270, 301, 558, 716, 1033, 1258
Cfr9I CCCGGG 1 cut(s) 505
CseI GACGC 1 cut(s) 91
Csp6I GTAC 2 cut(s) 475, 601
CspAI ACCGGT 1 cut(s) 493
CviAII CATG 6 cut(s) 14, 262, 622, 1020, 1049, 1112
CviQI GTAC 2 cut(s) 475, 601
DdeI CTNAG 5 cut(s) 225, 372, 594, 1029, 1377
DriI GACNNNNNGTC 1 cut(s) 83
EaeI YGGCCR 2 cut(s) 18, 1133
Eam1104I CTCTTC 1 cut(s) 288
Eam1105I GACNNNNNGTC 1 cut(s) 83
EarI CTCTTC 1 cut(s) 288
Eco24I GRGCYC 1 cut(s) 1027
Eco47I GGWCC 3 cut(s) 270, 558, 1033
Eco57I CTGAAG 1 cut(s) 82
Eco81I CCTNAGG 2 cut(s) 225, 1029
Eco88I CYCGRG 2 cut(s) 505, 972
EcoNI CCTNNNNNAGG 1 cut(s) 224
EcoO109I RGGNCCY 3 cut(s) 301, 1033, 1258
EcoRII CCWGG 1 cut(s) 34
EcoT38I GRGCYC 1 cut(s) 1027
FaeI CATG 6 cut(s) 17, 265, 625, 1023, 1052, 1115
FaqI GGGAC 3 cut(s) 11, 256, 1019
FatI CATG 6 cut(s) 13, 261, 621, 1019, 1048, 1111
FauI CCCGC 1 cut(s) 1055
FbaI TGATCA 1 cut(s) 624
FblI GTMKAC 1 cut(s) 314
Fnu4HI GCNGC 2 cut(s) 776, 924
FokI GGATG 5 cut(s) 101, 172, 522, 1306, 1312
FriOI GRGCYC 1 cut(s) 1027
Fsp4HI GCNGC 2 cut(s) 776, 924
FspBI CTAG 7 cut(s) 68, 305, 332, 854, 1097, 1172, 1402
GluI GCNGC 2 cut(s) 776, 924
GsaI CCCAGC 1 cut(s) 123
HaeIII GGCC 6 cut(s) 20, 302, 693, 717, 1135, 1260
HapII CCGG 3 cut(s) 494, 506, 1059
HgaI GACGC 1 cut(s) 91
Hin1II CATG 6 cut(s) 17, 265, 625, 1023, 1052, 1115
HincII GTYRAC 1 cut(s) 315
HindII GTYRAC 1 cut(s) 315
HinfI GANTC 6 cut(s) 249, 265, 290, 311, 316, 542
HpaII CCGG 3 cut(s) 494, 506, 1059
HphI GGTGA 3 cut(s) 97, 250, 886
Hpy166II GTNNAC 4 cut(s) 88, 208, 315, 833
Hpy188I TCNGA 1 cut(s) 1380
Hpy188III TCNNGA 6 cut(s) 161, 287, 551, 622, 860, 1178
Hpy8I GTNNAC 4 cut(s) 88, 208, 315, 833
HpyAV CCTTC 5 cut(s) 704, 1180, 1262, 1271, 1381
HpyCH4III ACNGT 1 cut(s) 527
HpyCH4IV ACGT 2 cut(s) 588, 999
HpyCH4V TGCA 7 cut(s) 523, 646, 833, 923, 1145, 1163, 1253
HpyF10VI GCNNNNNNNGC 4 cut(s) 662, 1059, 1250, 1373
HpyF3I CTNAG 5 cut(s) 225, 372, 594, 1029, 1377
HpySE526I ACGT 2 cut(s) 588, 999
Hsp92II CATG 6 cut(s) 17, 265, 625, 1023, 1052, 1115
Ksp22I TGATCA 1 cut(s) 624
LguI GCTCTTC 1 cut(s) 288
LmnI GCTCC 1 cut(s) 1030
Lsp1109I GCAGC 2 cut(s) 787, 935
LweI GCATC 3 cut(s) 346, 510, 1328
MaeI CTAG 7 cut(s) 68, 305, 332, 854, 1097, 1172, 1402
MaeII ACGT 2 cut(s) 588, 999
MaeIII GTNAC 2 cut(s) 103, 287
MboII GAAGA 4 cut(s) 275, 1247, 1286, 1341
MhlI GDGCHC 4 cut(s) 835, 1017, 1027, 1290
MlsI TGGCCA 2 cut(s) 20, 1135
MluCI AATT 7 cut(s) 377, 440, 532, 702, 889, 1038, 1263
MluNI TGGCCA 2 cut(s) 20, 1135
MlyI GAGTC 4 cut(s) 259, 284, 310, 320
Mox20I TGGCCA 2 cut(s) 20, 1135
MscI TGGCCA 2 cut(s) 20, 1135
MseI TTAA 4 cut(s) 234, 242, 1043, 1203
Msp20I TGGCCA 2 cut(s) 20, 1135
MspI CCGG 3 cut(s) 494, 506, 1059
MspR9I CCNGG 3 cut(s) 36, 506, 507
Mva1269I GAATGC 2 cut(s) 925, 1165
MvaI CCWGG 1 cut(s) 36
MwoI GCNNNNNNNGC 4 cut(s) 662, 1059, 1250, 1373
NciI CCSGG 2 cut(s) 506, 507
NheI GCTAGC 2 cut(s) 67, 1171
NlaIII CATG 6 cut(s) 17, 265, 625, 1023, 1052, 1115
NlaIV GGNNCC 4 cut(s) 272, 820, 1026, 1035
NmeAIII GCCGAG 2 cut(s) 298, 334
NmuCI GTSAC 2 cut(s) 103, 287
NspV TTCGAA 1 cut(s) 947
PagI TCATGA 1 cut(s) 621
PciSI GCTCTTC 1 cut(s) 288
PctI GAATGC 2 cut(s) 925, 1165
PfeI GAWTC 2 cut(s) 249, 542
PflFI GACNNNGTC 2 cut(s) 268, 684
PinAI ACCGGT 1 cut(s) 493
PkrI GCNGC 2 cut(s) 777, 925
PleI GAGTC 4 cut(s) 259, 284, 310, 319
PpsI GAGTC 4 cut(s) 259, 284, 310, 319
PpuMI RGGWCCY 1 cut(s) 1033
Psp5II RGGWCCY 1 cut(s) 1033
Psp6I CCWGG 1 cut(s) 34
PspFI CCCAGC 1 cut(s) 119
PspGI CCWGG 1 cut(s) 34
PspN4I GGNNCC 4 cut(s) 272, 820, 1026, 1035
PspPI GGNCC 6 cut(s) 270, 301, 558, 716, 1033, 1258
PspPPI RGGWCCY 1 cut(s) 1033
PsyI GACNNNGTC 2 cut(s) 268, 684
RsaI GTAC 2 cut(s) 476, 602
RsaNI GTAC 2 cut(s) 475, 601
SalI GTCGAC 1 cut(s) 313
SapI GCTCTTC 1 cut(s) 288
SaqAI TTAA 4 cut(s) 234, 242, 1043, 1203
SatI GCNGC 2 cut(s) 776, 924
Sau96I GGNCC 6 cut(s) 270, 301, 558, 716, 1033, 1258
SchI GAGTC 4 cut(s) 259, 284, 310, 320
ScrFI CCNGG 3 cut(s) 36, 506, 507
SduI GDGCHC 4 cut(s) 835, 1017, 1027, 1290
SfaNI GCATC 3 cut(s) 346, 510, 1328
SfuI TTCGAA 1 cut(s) 947
SinI GGWCC 3 cut(s) 270, 558, 1033
SmaI CCCGGG 1 cut(s) 507
SmlI CTYRAG 2 cut(s) 826, 1176
SmoI CTYRAG 2 cut(s) 826, 1176
Sse9I AATT 7 cut(s) 377, 440, 532, 702, 889, 1038, 1263
SsiI CCGC 2 cut(s) 1062, 1367
SspMI CTAG 7 cut(s) 68, 305, 332, 854, 1097, 1172, 1402
StyD4I CCNGG 3 cut(s) 34, 504, 505
TaaI ACNGT 1 cut(s) 527
TaiI ACGT 2 cut(s) 591, 1002
TaqI TCGA 6 cut(s) 293, 314, 453, 737, 947, 1055
TaqII GACCGA 1 cut(s) 258
TasI AATT 7 cut(s) 377, 440, 532, 702, 889, 1038, 1263
TatI WGTACW 1 cut(s) 474
TfiI GAWTC 2 cut(s) 249, 542
Tru1I TTAA 4 cut(s) 234, 242, 1043, 1203
Tru9I TTAA 4 cut(s) 234, 242, 1043, 1203
TscAI CASTG 2 cut(s) 795, 1170
TseFI GTSAC 2 cut(s) 103, 287
TseI GCWGC 2 cut(s) 775, 923
Tsp45I GTSAC 2 cut(s) 103, 287
TspDTI ATGAA 7 cut(s) 17, 103, 792, 854, 1100, 1172, 1223
TspMI CCCGGG 1 cut(s) 505
TspRI CASTG 2 cut(s) 795, 1170
Tth111I GACNNNGTC 2 cut(s) 268, 684
VneI GTGCAC 1 cut(s) 831
VpaK11BI GGWCC 3 cut(s) 270, 558, 1033
XagI CCTNNNNNAGG 1 cut(s) 224
XapI RAATTY 3 cut(s) 377, 532, 889
XmaI CCCGGG 1 cut(s) 505
XmiI GTMKAC 1 cut(s) 314
XspI CTAG 7 cut(s) 68, 305, 332, 854, 1097, 1172, 1402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.