Rh7BG150600

transferase activity, transferring hexosyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000558
Physical Location & Seq
Reverse (-)
11160976 .. 11162915
1940 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG150600.1

Sequence Viewer

Length: 1143 bp
ATGACTCGGTCCCTCCCTGCTCTTCGTGACTCGATCAAGGCCCTAGCCGAGTCGACTCGTCTGGTTGCCCTAGTGGTTGATCTTTTTGGCGGGGATGCTTTTGATGTGGCTAAGGAATTCGATATACTTCCCTACATTTTGTACCCTACAAATGCTATGGTATTGTGGTTTCAGTTTGAATTGCCAAAGCTCGACCAGACCATTTCTTGTGAGTACAGGGACTTGCCTGAACCGGTCAAACTCCCGGGATGTGTGCCGATCTACGGTAAAAATTTGTTAGACTCGGTTCAAGATAGGACCAACCAAGCCTACAAAGTGCTTATTGACGTTTCTAAGAGGTACAAGTCGGCTGCTGGGATCATGATCAATAGCTTTGTGGATTTGCAACCGGGTGCTTTCAAGGCTTTCAAAGAACAAGGACAAGGTCTTGGTCTTCCACCAATTTACCCGGTCGGACCGATAACAGAGACTGGTTCGACCAATGAGAATGCTTGTTTGAGCTGGTTAGATATGCAGCCTAATGGATCAGTGTTATTTATTTCATTTGGGAGTGGTGGCACCATCTCAAGTGAGCAAATGAATGAGTTGGCACTAGGGCTTGAAAAGAGCAGGGTGAGATTTATTTGGAATTTCAAGTGTCCAAATGAGACATCAAAAAATGCAGCTTACTTTGGTGTTCAAAGTTCGACCGACCCCTTAAGTTTTCTACCCCAAGGGTTTTTGGAGAGAACGAAAGACGTAGGGTTAGTGGTTACTTCTTGGGCTCCTCAGGTTCCAATTTTGAGTCATGGATCGACCGGCGGGTTTTTGACCCATTGTGGGTGGAACTCTACCCTAGAGAGTATTGTGCATGGTGTGCCTTTGGTTGCTTGGCCACTCTATGCAGAGCAACGAATGAATGCAGTTTTGTTAGCTCAAGATTTGAAGGTGGCGTGGAGGGTTAAGATGAACGATAAGGGCATTGTAGAGAGTCAAGACATTGCCAAATATGCAAAGGGCCTAATTGAAGGAGAAGAAGGGAAAGTGCTCAGAAAGAGGATGATAGAGCTAAAAGAGGCATCCCAAATGGCTTTGAGCCAAGATGGGTCTTCTACAAAATCACTTGCGGAGGTAGCTCAGATATGGAAGGATCACAAGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

380

Amino Acids

41.91

Weight (kDa)

5.93

Isoelectric Point (pI)

39.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 164 - 338 3.9e-22 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64350
fragaria_vesca FvH4_5g04160 FvH4_5g04161 FvH4_5g04200 FvH4_5g04210 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211
malus_domestica MD06G1103300.v1.1 MD06G1103400.v1.1 MD06G1103500.v1.1 MD06G1103600.v1.1 MD06G1103700.v1.1 MD06G1116200.v1.1 MD14G1122800.v1.1 MD14G1133100.v1.1
prunus_persica Prupe.5G116100_v2.0.a1 Prupe.5G116300_v2.0.a1 Prupe.I001100_v2.0.a1
pyrus_communis pycom03g16970 pycom06g09790 pycom06g09810 pycom06g09830 pycom06g09840
rosa_chinensis RchiOBHm_Chr7g0195271 RchiOBHm_Chr7g0195281 RchiOBHm_Chr7g0195291 RchiOBHm_Chr7g0195301 RchiOBHm_Chr7g0195311 RchiOBHm_Chr7g0222791
rosa_laevigata RLG00000004129 RLG00000004130 RLG00000004133 RLG00000004134 RLG00000004135
rosa_multiflora Rmu_co8481937.1_g000001 Rmu_sc0002381.1_g000002 Rmu_sc0002381.1_g000003 Rmu_sc0002381.1_g000007 Rmu_sc0002881.1_g000005 Rmu_sc0007366.1_g000001 Rmu_sc0011789.1_g000001 Rmu_sc0039338.1_g000002 Rmu_sc0039339.1_g000002
rosa_roxburghii Rroxscaffold_3G00235780 Rroxscaffold_3G00260600 Rroxscaffold_3G00260620 Rroxscaffold_3G00260630
rosa_rugosa Rorug07G0022200 Rorug07G0022300 Rorug07G0022400 Rorug07G0022500 Rorug07G0022600 Rorug07G0216900
rosa_samantha Rh7AG149300 Rh7AG149400 Rh7AG149500 Rh7AG149600 Rh7AG149700 Rh7AG356800 Rh7BG150500 Rh7BG150600 Rh7BG150700 Rh7BG150800 Rh7BG150900 Rh7BG151200 Rh7BG350700 Rh7CG154100 Rh7CG154200 Rh7CG154300 Rh7CG154700 Rh7CG374200 Rh7DG150500 Rh7DG150600 Rh7DG150700 Rh7DG150800 Rh7DG150900
rosa_wichuraiana Rw7G012750 Rw7G012760 Rw7G012770 Rw7G012780 Rw7G030260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 557
AccI GTMKAC 1 cut(s) 53
AciI CCGC 3 cut(s) 90, 801, 1106
AclWI GGATC 4 cut(s) 365, 532, 799, 1137
AcoI YGGCCR 1 cut(s) 872
AcsI RAATTY 3 cut(s) 116, 271, 628
AfaI GTAC 3 cut(s) 143, 215, 341
AfiI CCNNNNNNNGG 2 cut(s) 263, 819
AflII CTTAAG 1 cut(s) 697
AgeI ACCGGT 1 cut(s) 232
AgsI TTSAA 9 cut(s) 179, 290, 400, 409, 602, 634, 680, 925, 1007
AluBI AGCT 7 cut(s) 190, 372, 501, 665, 914, 1048, 1115
AluI AGCT 7 cut(s) 190, 372, 501, 665, 914, 1048, 1115
Alw21I GWGCWC 1 cut(s) 1029
Alw26I GTCTC 2 cut(s) 461, 641
AlwI GGATC 4 cut(s) 365, 532, 799, 1137
AlwNI CAGNNNCTG 1 cut(s) 470
Ama87I CYCGRG 1 cut(s) 244
AoxI GGCC 3 cut(s) 39, 872, 997
ApeKI GCWGC 3 cut(s) 350, 514, 662
ApoI RAATTY 3 cut(s) 116, 271, 628
AsiGI ACCGGT 1 cut(s) 232
AspS9I GGNCC 5 cut(s) 9, 40, 297, 455, 997
AsuC2I CCSGG 4 cut(s) 245, 246, 390, 449
AsuHPI GGTGA 1 cut(s) 625
AvaI CYCGRG 1 cut(s) 244
AvaII GGWCC 3 cut(s) 9, 297, 455
AxyI CCTNAGG 1 cut(s) 768
BalI TGGCCA 1 cut(s) 874
BanI GGYRCC 1 cut(s) 557
BanII GRGCYC 1 cut(s) 766
BbsI GAAGAC 2 cut(s) 425, 1080
Bbv12I GWGCWC 1 cut(s) 1029
BbvI GCAGC 3 cut(s) 337, 526, 674
BccI CCATC 2 cut(s) 569, 1076
BclI TGATCA 1 cut(s) 363
BcnI CCSGG 4 cut(s) 245, 246, 390, 449
BcoDI GTCTC 2 cut(s) 461, 641
BfaI CTAG 4 cut(s) 44, 71, 593, 836
BfrI CTTAAG 1 cut(s) 697
BisI GCNGC 3 cut(s) 351, 515, 663
BlsI GCNGC 3 cut(s) 352, 516, 664
Bme1390I CCNGG 4 cut(s) 245, 246, 390, 449
Bme18I GGWCC 3 cut(s) 9, 297, 455
BmeT110I CYCGRG 1 cut(s) 244
BmgT120I GGNCC 5 cut(s) 9, 40, 297, 455, 997
BmiI GGNNCC 4 cut(s) 11, 559, 765, 774
BmrFI CCNGG 4 cut(s) 245, 246, 390, 449
BmsI GCATC 2 cut(s) 85, 1067
BpiI GAAGAC 2 cut(s) 425, 1080
Bpu10I CCTNAGC 1 cut(s) 111
BpuEI CTTGAG 2 cut(s) 550, 900
BpuMI CCSGG 4 cut(s) 245, 246, 390, 449
BsaBI GATNNNNATC 1 cut(s) 362
BsaJI CCNNGG 2 cut(s) 244, 712
BsaWI WCCGGW 1 cut(s) 232
Bsc4I CCNNNNNNNGG 2 cut(s) 263, 819
Bse118I RCCGGY 2 cut(s) 232, 797
Bse1I ACTGG 1 cut(s) 475
Bse21I CCTNAGG 1 cut(s) 768
Bse3DI GCAATG 1 cut(s) 978
Bse8I GATNNNNATC 1 cut(s) 362
BseDI CCNNGG 2 cut(s) 244, 712
BseGI GGATG 4 cut(s) 100, 254, 1044, 1058
BseJI GATNNNNATC 1 cut(s) 362
BseLI CCNNNNNNNGG 2 cut(s) 263, 819
BseMI GCAATG 1 cut(s) 978
BseMII CTCAG 3 cut(s) 782, 1042, 1130
BseNI ACTGG 1 cut(s) 475
BseRI GAGGAG 1 cut(s) 756
BseXI GCAGC 3 cut(s) 337, 526, 674
BseYI CCCAGC 1 cut(s) 353
Bsh1285I CGRYCG 3 cut(s) 453, 690, 798
BshFI GGCC 3 cut(s) 41, 874, 999
BshNI GGYRCC 1 cut(s) 557
BshTI ACCGGT 1 cut(s) 232
BsiEI CGRYCG 3 cut(s) 453, 690, 798
BsiHKAI GWGCWC 1 cut(s) 1029
BsiHKCI CYCGRG 1 cut(s) 244
BsiSI CCGG 5 cut(s) 233, 245, 389, 449, 798
BslFI GGGAC 1 cut(s) 233
BslI CCNNNNNNNGG 2 cut(s) 263, 819
BsmAI GTCTC 2 cut(s) 461, 641
BsmFI GGGAC 1 cut(s) 233
BsmI GAATGC 2 cut(s) 493, 904
BsnI GGCC 3 cut(s) 41, 874, 999
BsoBI CYCGRG 1 cut(s) 244
Bsp1286I GDGCHC 2 cut(s) 766, 1029
Bsp143I GATC 8 cut(s) 33, 79, 258, 357, 363, 524, 791, 1129
BspACI CCGC 3 cut(s) 90, 801, 1106
BspANI GGCC 3 cut(s) 41, 874, 999
BspCNI CTCAG 3 cut(s) 781, 1041, 1129
BspHI TCATGA 1 cut(s) 360
BspLI GGNNCC 4 cut(s) 11, 559, 765, 774
BspPI GGATC 4 cut(s) 365, 532, 799, 1137
BspQI GCTCTTC 1 cut(s) 27
BspT107I GGYRCC 1 cut(s) 557
BspTI CTTAAG 1 cut(s) 697
BsrDI GCAATG 1 cut(s) 978
BsrFI RCCGGY 2 cut(s) 232, 797
BsrI ACTGG 1 cut(s) 475
BssAI RCCGGY 2 cut(s) 232, 797
BssECI CCNNGG 2 cut(s) 244, 712
BssMI GATC 8 cut(s) 33, 79, 258, 357, 363, 524, 791, 1129
BssT1I CCWWGG 1 cut(s) 712
Bst4CI ACNGT 1 cut(s) 266
Bst6I CTCTTC 1 cut(s) 27
BstAFI CTTAAG 1 cut(s) 697
BstAPI GCANNNNNTGC 1 cut(s) 856
BstDEI CTNAG 5 cut(s) 111, 333, 768, 1028, 1116
BstF5I GGATG 4 cut(s) 100, 254, 1044, 1058
BstKTI GATC 8 cut(s) 36, 82, 261, 360, 366, 527, 794, 1132
BstMAI GTCTC 2 cut(s) 461, 641
BstMBI GATC 8 cut(s) 33, 79, 258, 357, 363, 524, 791, 1129
BstMCI CGRYCG 3 cut(s) 453, 690, 798
BstMWI GCNNNNNNNGC 4 cut(s) 401, 856, 989, 1112
BstSCI CCNGG 4 cut(s) 243, 244, 388, 447
BstV1I GCAGC 3 cut(s) 337, 526, 674
BstV2I GAAGAC 2 cut(s) 425, 1080
Bsu36I CCTNAGG 1 cut(s) 768
BsuRI GGCC 3 cut(s) 41, 874, 999
BtsCI GGATG 4 cut(s) 100, 254, 1044, 1058
BtsIMutI CAGTG 1 cut(s) 534
CaiI CAGNNNCTG 1 cut(s) 470
CciI TCATGA 1 cut(s) 360
Cfr10I RCCGGY 2 cut(s) 232, 797
Cfr13I GGNCC 5 cut(s) 9, 40, 297, 455, 997
Cfr9I CCCGGG 1 cut(s) 244
CpoI CGGWCCG 1 cut(s) 455
Csp6I GTAC 3 cut(s) 142, 214, 340
CspAI ACCGGT 1 cut(s) 232
CspI CGGWCCG 1 cut(s) 455
CviAII CATG 3 cut(s) 361, 788, 851
CviQI GTAC 3 cut(s) 142, 214, 340
DdeI CTNAG 5 cut(s) 111, 333, 768, 1028, 1116
DpnI GATC 8 cut(s) 35, 81, 260, 359, 365, 526, 793, 1131
DpnII GATC 8 cut(s) 33, 79, 258, 357, 363, 524, 791, 1129
EaeI YGGCCR 1 cut(s) 872
Eam1104I CTCTTC 1 cut(s) 27
EarI CTCTTC 1 cut(s) 27
Eco130I CCWWGG 1 cut(s) 712
Eco24I GRGCYC 1 cut(s) 766
Eco47I GGWCC 3 cut(s) 9, 297, 455
Eco81I CCTNAGG 1 cut(s) 768
Eco88I CYCGRG 1 cut(s) 244
EcoO109I RGGNCCY 2 cut(s) 40, 997
EcoRI GAATTC 1 cut(s) 116
EcoT14I CCWWGG 1 cut(s) 712
EcoT38I GRGCYC 1 cut(s) 766
ErhI CCWWGG 1 cut(s) 712
FaeI CATG 3 cut(s) 364, 791, 854
FaiI YATR 9 cut(s) 125, 158, 362, 512, 789, 852, 882, 990, 1123
FaqI GGGAC 1 cut(s) 233
FatI CATG 3 cut(s) 360, 787, 850
FauI CCCGC 2 cut(s) 83, 794
FbaI TGATCA 1 cut(s) 363
FblI GTMKAC 1 cut(s) 53
Fnu4HI GCNGC 3 cut(s) 351, 515, 663
FokI GGATG 4 cut(s) 107, 261, 1045, 1051
FriOI GRGCYC 1 cut(s) 766
Fsp4HI GCNGC 3 cut(s) 351, 515, 663
FspBI CTAG 4 cut(s) 44, 71, 593, 836
GluI GCNGC 3 cut(s) 351, 515, 663
GsaI CCCAGC 1 cut(s) 357
HaeIII GGCC 3 cut(s) 41, 874, 999
HapII CCGG 5 cut(s) 233, 245, 389, 449, 798
Hin1II CATG 3 cut(s) 364, 791, 854
HincII GTYRAC 1 cut(s) 54
HindII GTYRAC 1 cut(s) 54
HinfI GANTC 7 cut(s) 4, 29, 50, 55, 281, 784, 970
HpaII CCGG 5 cut(s) 233, 245, 389, 449, 798
HphI GGTGA 1 cut(s) 625
Hpy166II GTNNAC 1 cut(s) 54
Hpy188I TCNGA 3 cut(s) 455, 1031, 1119
Hpy188III TCNNGA 5 cut(s) 26, 290, 361, 917, 974
Hpy8I GTNNAC 1 cut(s) 54
HpyAV CCTTC 4 cut(s) 919, 1001, 1010, 1120
HpyCH4III ACNGT 1 cut(s) 266
HpyCH4IV ACGT 2 cut(s) 327, 738
HpyCH4V TGCA 7 cut(s) 385, 514, 662, 850, 884, 902, 992
HpyF10VI GCNNNNNNNGC 4 cut(s) 401, 856, 989, 1112
HpyF3I CTNAG 5 cut(s) 111, 333, 768, 1028, 1116
HpySE526I ACGT 2 cut(s) 327, 738
Hsp92II CATG 3 cut(s) 364, 791, 854
Ksp22I TGATCA 1 cut(s) 363
Kzo9I GATC 8 cut(s) 33, 79, 258, 357, 363, 524, 791, 1129
LguI GCTCTTC 1 cut(s) 27
LmnI GCTCC 1 cut(s) 769
Lsp1109I GCAGC 3 cut(s) 337, 526, 674
LweI GCATC 2 cut(s) 85, 1067
MaeI CTAG 4 cut(s) 44, 71, 593, 836
MaeII ACGT 2 cut(s) 327, 738
MaeIII GTNAC 2 cut(s) 26, 751
MalI GATC 8 cut(s) 35, 81, 260, 359, 365, 526, 793, 1131
MboI GATC 8 cut(s) 33, 79, 258, 357, 363, 524, 791, 1129
MboII GAAGA 4 cut(s) 14, 425, 1025, 1080
MhlI GDGCHC 2 cut(s) 766, 1029
MlsI TGGCCA 1 cut(s) 874
MluCI AATT 7 cut(s) 116, 179, 271, 441, 628, 777, 1002
MluNI TGGCCA 1 cut(s) 874
MlyI GAGTC 6 cut(s) 23, 49, 59, 275, 793, 979
MmeI TCCRAC 1 cut(s) 433
MnlI CCTC 7 cut(s) 23, 330, 777, 930, 1029, 1048, 1102
Mox20I TGGCCA 1 cut(s) 874
MscI TGGCCA 1 cut(s) 874
MseI TTAA 2 cut(s) 698, 942
Msp20I TGGCCA 1 cut(s) 874
MspCI CTTAAG 1 cut(s) 697
MspI CCGG 5 cut(s) 233, 245, 389, 449, 798
MspR9I CCNGG 4 cut(s) 245, 246, 390, 449
Mva1269I GAATGC 2 cut(s) 493, 904
MwoI GCNNNNNNNGC 4 cut(s) 401, 856, 989, 1112
NciI CCSGG 4 cut(s) 245, 246, 390, 449
NdeII GATC 8 cut(s) 33, 79, 258, 357, 363, 524, 791, 1129
NlaIII CATG 3 cut(s) 364, 791, 854
NlaIV GGNNCC 4 cut(s) 11, 559, 765, 774
NmeAIII GCCGAG 1 cut(s) 73
NmuCI GTSAC 1 cut(s) 26
PagI TCATGA 1 cut(s) 360
PciSI GCTCTTC 1 cut(s) 27
PctI GAATGC 2 cut(s) 493, 904
PflFI GACNNNGTC 2 cut(s) 7, 423
PinAI ACCGGT 1 cut(s) 232
PkrI GCNGC 3 cut(s) 352, 516, 664
PleI GAGTC 6 cut(s) 23, 49, 58, 275, 792, 978
PpsI GAGTC 6 cut(s) 23, 49, 58, 275, 792, 978
PspFI CCCAGC 1 cut(s) 353
PspN4I GGNNCC 4 cut(s) 11, 559, 765, 774
PspPI GGNCC 5 cut(s) 9, 40, 297, 455, 997
PstNI CAGNNNCTG 1 cut(s) 470
PsyI GACNNNGTC 2 cut(s) 7, 423
RsaI GTAC 3 cut(s) 143, 215, 341
RsaNI GTAC 3 cut(s) 142, 214, 340
Rsr2I CGGWCCG 1 cut(s) 455
RsrII CGGWCCG 1 cut(s) 455
SalI GTCGAC 1 cut(s) 52
SapI GCTCTTC 1 cut(s) 27
SaqAI TTAA 2 cut(s) 698, 942
SatI GCNGC 3 cut(s) 351, 515, 663
Sau3AI GATC 8 cut(s) 33, 79, 258, 357, 363, 524, 791, 1129
Sau96I GGNCC 5 cut(s) 9, 40, 297, 455, 997
SchI GAGTC 6 cut(s) 23, 49, 59, 275, 793, 979
ScrFI CCNGG 4 cut(s) 245, 246, 390, 449
SduI GDGCHC 2 cut(s) 766, 1029
SfaNI GCATC 2 cut(s) 85, 1067
SinI GGWCC 3 cut(s) 9, 297, 455
SmaI CCCGGG 1 cut(s) 246
SmlI CTYRAG 3 cut(s) 565, 697, 915
SmoI CTYRAG 3 cut(s) 565, 697, 915
Sse9I AATT 7 cut(s) 116, 179, 271, 441, 628, 777, 1002
SsiI CCGC 3 cut(s) 90, 801, 1106
SspMI CTAG 4 cut(s) 44, 71, 593, 836
StyD4I CCNGG 4 cut(s) 243, 244, 388, 447
StyI CCWWGG 1 cut(s) 712
TaaI ACNGT 1 cut(s) 266
TaiI ACGT 2 cut(s) 330, 741
TaqI TCGA 7 cut(s) 32, 53, 120, 192, 476, 686, 794
TaqII GACCGA 2 cut(s) 472, 704
TasI AATT 7 cut(s) 116, 179, 271, 441, 628, 777, 1002
TatI WGTACW 1 cut(s) 213
Tru1I TTAA 2 cut(s) 698, 942
Tru9I TTAA 2 cut(s) 698, 942
TscAI CASTG 1 cut(s) 534
TseFI GTSAC 1 cut(s) 26
TseI GCWGC 3 cut(s) 350, 514, 662
Tsp45I GTSAC 1 cut(s) 26
TspDTI ATGAA 4 cut(s) 531, 593, 911, 962
TspMI CCCGGG 1 cut(s) 244
TspRI CASTG 1 cut(s) 534
Tth111I GACNNNGTC 2 cut(s) 7, 423
Vha464I CTTAAG 1 cut(s) 697
VpaK11BI GGWCC 3 cut(s) 9, 297, 455
XapI RAATTY 3 cut(s) 116, 271, 628
XmaI CCCGGG 1 cut(s) 244
XmiI GTMKAC 1 cut(s) 53
XspI CTAG 4 cut(s) 44, 71, 593, 836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.