Rh7CG374200

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000558
Physical Location & Seq
Reverse (-)
47084913 .. 47086680
1768 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG374200.1

Sequence Viewer

Length: 669 bp
ATGGAACCAGCCGGTCAATTCGCCATTGTCCCAACTCCAGGTTTAGGCCACCTGATCGAGCTGGCCAAACGACTCGTTGTCCACCACAACTTCACCGTCACCTTCCTCATCCCCAACGACGGTACGAACCTGACACCGCAAAAGAAAGTCCTGGAAGCTTTGCCGGAGAGCATATCCTCCACCTTCCTCCCTCCAGTCAACTTCGACGACCTCCCACCAGAATCGAAGGTGGAAACCAAGATCGCTCTCACCTTGGCTCGGTCACTCTTCGCTGTTCGCGACTCAGTTAAGGCCCTAGCGGAATCGACTCGGCTGGTGGCGCTTGTTGTTGATCTCTTTGGTCCGGAGGCCTTTGATGTGGCCATTGAGTTTAATGTGCTGCCCTACCTTTTCTTCCCTACTTCGGCAATGGATTTGTGGTTTGTGTTTGAGTTGCCAAAGCTTGACGAGACTACTACTTGTGAGTACAGGGATTTGCCTGAACCGGTCCAGTATCCGGGTTGTGTGCCGTTGCATGGCAGAGACTTAGCAGACCTGGTTCAAGATAGGAGCAATGATGCTTATAAGGCGCTGATCCGCATCAGTAAGAGGTATAAGTCGGCTGCTGGGATCATGGTGAATAGCTTTGCGGATTTGGAACCGGGTGCTTTCAAGGCTTTCAAGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

222

Amino Acids

24.61

Weight (kDa)

5.07

Isoelectric Point (pI)

38.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64350
fragaria_vesca FvH4_5g04160 FvH4_5g04161 FvH4_5g04200 FvH4_5g04210 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211
malus_domestica MD06G1103300.v1.1 MD06G1103400.v1.1 MD06G1103500.v1.1 MD06G1103600.v1.1 MD06G1103700.v1.1 MD06G1116200.v1.1 MD14G1122800.v1.1 MD14G1133100.v1.1
prunus_persica Prupe.5G116100_v2.0.a1 Prupe.5G116300_v2.0.a1 Prupe.I001100_v2.0.a1
pyrus_communis pycom03g16970 pycom06g09790 pycom06g09810 pycom06g09830 pycom06g09840
rosa_chinensis RchiOBHm_Chr7g0195271 RchiOBHm_Chr7g0195281 RchiOBHm_Chr7g0195291 RchiOBHm_Chr7g0195301 RchiOBHm_Chr7g0195311 RchiOBHm_Chr7g0222791
rosa_laevigata RLG00000004129 RLG00000004130 RLG00000004133 RLG00000004134 RLG00000004135
rosa_multiflora Rmu_co8481937.1_g000001 Rmu_sc0002381.1_g000002 Rmu_sc0002381.1_g000003 Rmu_sc0002381.1_g000007 Rmu_sc0002881.1_g000005 Rmu_sc0007366.1_g000001 Rmu_sc0011789.1_g000001 Rmu_sc0039338.1_g000002 Rmu_sc0039339.1_g000002
rosa_roxburghii Rroxscaffold_3G00235780 Rroxscaffold_3G00260600 Rroxscaffold_3G00260620 Rroxscaffold_3G00260630
rosa_rugosa Rorug07G0022200 Rorug07G0022300 Rorug07G0022400 Rorug07G0022500 Rorug07G0022600 Rorug07G0216900
rosa_samantha Rh7AG149300 Rh7AG149400 Rh7AG149500 Rh7AG149600 Rh7AG149700 Rh7AG356800 Rh7BG150500 Rh7BG150600 Rh7BG150700 Rh7BG150800 Rh7BG150900 Rh7BG151200 Rh7BG350700 Rh7CG154100 Rh7CG154200 Rh7CG154300 Rh7CG154700 Rh7CG374200 Rh7DG150500 Rh7DG150600 Rh7DG150700 Rh7DG150800 Rh7DG150900
rosa_wichuraiana Rw7G012750 Rw7G012760 Rw7G012770 Rw7G012780 Rw7G030260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 564
AccII CGCG 1 cut(s) 279
AccIII TCCGGA 1 cut(s) 343
AciI CCGC 4 cut(s) 137, 299, 577, 629
AclWI GGATC 2 cut(s) 568, 617
AcoI YGGCCR 2 cut(s) 63, 360
AfaI GTAC 2 cut(s) 124, 467
AfiI CCNNNNNNNGG 7 cut(s) 38, 44, 119, 258, 403, 496, 515
AgeI ACCGGT 1 cut(s) 484
AgsI TTSAA 3 cut(s) 542, 652, 661
AhdI GACNNNNNGTC 1 cut(s) 77
AjnI CCWGG 3 cut(s) 37, 150, 534
AluBI AGCT 4 cut(s) 61, 158, 442, 624
AluI AGCT 4 cut(s) 61, 158, 442, 624
Alw26I GTCTC 2 cut(s) 443, 516
AlwI GGATC 2 cut(s) 568, 617
Aor13HI TCCGGA 1 cut(s) 343
AoxI GGCC 5 cut(s) 46, 63, 291, 348, 360
ApeKI GCWGC 2 cut(s) 379, 602
AsiGI ACCGGT 1 cut(s) 484
AspLEI GCGC 2 cut(s) 322, 571
AspS9I GGNCC 3 cut(s) 292, 341, 487
AsuC2I CCSGG 2 cut(s) 498, 642
AsuHPI GGTGA 4 cut(s) 85, 91, 241, 628
AvaII GGWCC 2 cut(s) 341, 487
BalI TGGCCA 2 cut(s) 65, 362
BbvI GCAGC 2 cut(s) 366, 589
BceAI ACGGC 1 cut(s) 493
BciT130I CCWGG 3 cut(s) 39, 152, 536
BciVI GTATCC 1 cut(s) 504
BcnI CCSGG 2 cut(s) 498, 642
BcoDI GTCTC 2 cut(s) 443, 516
BfaI CTAG 1 cut(s) 296
BfoI RGCGCY 2 cut(s) 323, 572
BfuI GTATCC 1 cut(s) 504
BisI GCNGC 2 cut(s) 380, 603
BlsI GCNGC 2 cut(s) 381, 604
Bme1390I CCNGG 5 cut(s) 39, 152, 498, 536, 642
Bme18I GGWCC 2 cut(s) 341, 487
BmeRI GACNNNNNGTC 1 cut(s) 77
BmgT120I GGNCC 3 cut(s) 292, 341, 487
BmiI GGNNCC 2 cut(s) 6, 639
BmrFI CCNGG 5 cut(s) 39, 152, 498, 536, 642
BmsI GCATC 2 cut(s) 547, 588
BpmI CTGGAG 2 cut(s) 21, 177
BpuMI CCSGG 2 cut(s) 498, 642
BsaBI GATNNNNATC 1 cut(s) 578
BsaJI CCNNGG 1 cut(s) 252
BsaWI WCCGGW 2 cut(s) 343, 484
Bsc4I CCNNNNNNNGG 7 cut(s) 38, 44, 119, 258, 403, 496, 515
Bse118I RCCGGY 2 cut(s) 11, 484
Bse1I ACTGG 2 cut(s) 194, 490
Bse3DI GCAATG 2 cut(s) 414, 559
Bse8I GATNNNNATC 1 cut(s) 578
BseAI TCCGGA 1 cut(s) 343
BseBI CCWGG 3 cut(s) 39, 152, 536
BseDI CCNNGG 1 cut(s) 252
BseGI GGATG 1 cut(s) 108
BseJI GATNNNNATC 1 cut(s) 578
BseLI CCNNNNNNNGG 7 cut(s) 38, 44, 119, 258, 403, 496, 515
BseMI GCAATG 2 cut(s) 414, 559
BseMII CTCAG 1 cut(s) 297
BseNI ACTGG 2 cut(s) 194, 490
BseXI GCAGC 2 cut(s) 366, 589
BseYI CCCAGC 1 cut(s) 605
Bsh1236I CGCG 1 cut(s) 279
BshFI GGCC 5 cut(s) 48, 65, 293, 350, 362
BshTI ACCGGT 1 cut(s) 484
BsiSI CCGG 6 cut(s) 12, 164, 344, 485, 497, 641
BslFI GGGAC 1 cut(s) 14
BslI CCNNNNNNNGG 7 cut(s) 38, 44, 119, 258, 403, 496, 515
BsmAI GTCTC 2 cut(s) 443, 516
BsmFI GGGAC 1 cut(s) 14
BsnI GGCC 5 cut(s) 48, 65, 293, 350, 362
Bsp13I TCCGGA 1 cut(s) 343
Bsp143I GATC 5 cut(s) 54, 240, 331, 573, 609
Bsp68I TCGCGA 1 cut(s) 279
BspACI CCGC 4 cut(s) 137, 299, 577, 629
BspANI GGCC 5 cut(s) 48, 65, 293, 350, 362
BspCNI CTCAG 1 cut(s) 296
BspEI TCCGGA 1 cut(s) 343
BspFNI CGCG 1 cut(s) 279
BspLI GGNNCC 2 cut(s) 6, 639
BspPI GGATC 2 cut(s) 568, 617
BsrDI GCAATG 2 cut(s) 414, 559
BsrFI RCCGGY 2 cut(s) 11, 484
BsrI ACTGG 2 cut(s) 194, 490
BssAI RCCGGY 2 cut(s) 11, 484
BssECI CCNNGG 1 cut(s) 252
BssMI GATC 5 cut(s) 54, 240, 331, 573, 609
BssT1I CCWWGG 1 cut(s) 252
Bst2UI CCWGG 3 cut(s) 39, 152, 536
Bst4CI ACNGT 2 cut(s) 97, 122
Bst6I CTCTTC 1 cut(s) 272
BstC8I GCNNGC 1 cut(s) 63
BstDEI CTNAG 2 cut(s) 283, 526
BstF5I GGATG 1 cut(s) 108
BstFNI CGCG 1 cut(s) 279
BstH2I RGCGCY 2 cut(s) 323, 572
BstHHI GCGC 2 cut(s) 322, 571
BstKTI GATC 5 cut(s) 57, 243, 334, 576, 612
BstMAI GTCTC 2 cut(s) 443, 516
BstMBI GATC 5 cut(s) 54, 240, 331, 573, 609
BstMWI GCNNNNNNNGC 3 cut(s) 319, 566, 653
BstNI CCWGG 3 cut(s) 39, 152, 536
BstSCI CCNGG 5 cut(s) 37, 150, 496, 534, 640
BstUI CGCG 1 cut(s) 279
BstV1I GCAGC 2 cut(s) 366, 589
BsuI GTATCC 1 cut(s) 504
BsuRI GGCC 5 cut(s) 48, 65, 293, 350, 362
BtsCI GGATG 1 cut(s) 108
BtuMI TCGCGA 1 cut(s) 279
Cac8I GCNNGC 1 cut(s) 63
CfoI GCGC 2 cut(s) 322, 571
Cfr10I RCCGGY 2 cut(s) 11, 484
Cfr13I GGNCC 3 cut(s) 292, 341, 487
CsiI ACCWGGT 1 cut(s) 534
Csp6I GTAC 2 cut(s) 123, 466
CspAI ACCGGT 1 cut(s) 484
CviAII CATG 2 cut(s) 515, 613
CviQI GTAC 2 cut(s) 123, 466
DdeI CTNAG 2 cut(s) 283, 526
DpnI GATC 5 cut(s) 56, 242, 333, 575, 611
DpnII GATC 5 cut(s) 54, 240, 331, 573, 609
DriI GACNNNNNGTC 1 cut(s) 77
EaeI YGGCCR 2 cut(s) 63, 360
Eam1104I CTCTTC 1 cut(s) 272
Eam1105I GACNNNNNGTC 1 cut(s) 77
EarI CTCTTC 1 cut(s) 272
Eco130I CCWWGG 1 cut(s) 252
Eco147I AGGCCT 1 cut(s) 350
Eco47I GGWCC 2 cut(s) 341, 487
EcoO109I RGGNCCY 1 cut(s) 292
EcoRII CCWGG 3 cut(s) 37, 150, 534
EcoT14I CCWWGG 1 cut(s) 252
ErhI CCWWGG 1 cut(s) 252
FaeI CATG 2 cut(s) 518, 616
FaiI YATR 5 cut(s) 173, 516, 564, 594, 614
FaqI GGGAC 1 cut(s) 14
FatI CATG 2 cut(s) 514, 612
Fnu4HI GCNGC 2 cut(s) 380, 603
FokI GGATG 1 cut(s) 95
Fsp4HI GCNGC 2 cut(s) 380, 603
FspBI CTAG 1 cut(s) 296
GlaI GCGC 2 cut(s) 321, 570
GluI GCNGC 2 cut(s) 380, 603
GsaI CCCAGC 1 cut(s) 609
GsuI CTGGAG 2 cut(s) 21, 177
HaeII RGCGCY 2 cut(s) 323, 572
HaeIII GGCC 5 cut(s) 48, 65, 293, 350, 362
HapII CCGG 6 cut(s) 12, 164, 344, 485, 497, 641
HhaI GCGC 2 cut(s) 322, 571
Hin1II CATG 2 cut(s) 518, 616
Hin6I GCGC 2 cut(s) 320, 569
HinP1I GCGC 2 cut(s) 320, 569
HincII GTYRAC 1 cut(s) 199
HindII GTYRAC 1 cut(s) 199
HindIII AAGCTT 2 cut(s) 156, 440
HinfI GANTC 5 cut(s) 72, 221, 281, 302, 307
HpaII CCGG 6 cut(s) 12, 164, 344, 485, 497, 641
HphI GGTGA 4 cut(s) 85, 91, 241, 628
Hpy166II GTNNAC 2 cut(s) 82, 199
Hpy188III TCNNGA 3 cut(s) 278, 344, 542
Hpy8I GTNNAC 2 cut(s) 82, 199
Hpy99I CGWCG 2 cut(s) 122, 209
HpyAV CCTTC 3 cut(s) 112, 193, 220
HpyCH4III ACNGT 2 cut(s) 97, 122
HpyCH4V TGCA 1 cut(s) 514
HpyF10VI GCNNNNNNNGC 3 cut(s) 319, 566, 653
HpyF3I CTNAG 2 cut(s) 283, 526
Hsp92II CATG 2 cut(s) 518, 616
HspAI GCGC 2 cut(s) 320, 569
Kpn2I TCCGGA 1 cut(s) 343
Kzo9I GATC 5 cut(s) 54, 240, 331, 573, 609
LmnI GCTCC 1 cut(s) 549
Lsp1109I GCAGC 2 cut(s) 366, 589
LweI GCATC 2 cut(s) 547, 588
MabI ACCWGGT 1 cut(s) 534
MaeI CTAG 1 cut(s) 296
MaeIII GTNAC 2 cut(s) 97, 261
MalI GATC 5 cut(s) 56, 242, 333, 575, 611
MboI GATC 5 cut(s) 54, 240, 331, 573, 609
MboII GAAGA 2 cut(s) 259, 385
MlsI TGGCCA 2 cut(s) 65, 362
MluCI AATT 1 cut(s) 17
MluNI TGGCCA 2 cut(s) 65, 362
MlyI GAGTC 3 cut(s) 66, 275, 301
MnlI CCTC 7 cut(s) 116, 187, 197, 201, 221, 340, 582
Mox20I TGGCCA 2 cut(s) 65, 362
MroI TCCGGA 1 cut(s) 343
MscI TGGCCA 2 cut(s) 65, 362
MseI TTAA 2 cut(s) 288, 372
Msp20I TGGCCA 2 cut(s) 65, 362
MspI CCGG 6 cut(s) 12, 164, 344, 485, 497, 641
MspR9I CCNGG 5 cut(s) 39, 152, 498, 536, 642
MvaI CCWGG 3 cut(s) 39, 152, 536
MvnI CGCG 1 cut(s) 279
MwoI GCNNNNNNNGC 3 cut(s) 319, 566, 653
NciI CCSGG 2 cut(s) 498, 642
NdeII GATC 5 cut(s) 54, 240, 331, 573, 609
NlaIII CATG 2 cut(s) 518, 616
NlaIV GGNNCC 2 cut(s) 6, 639
NmeAIII GCCGAG 1 cut(s) 289
NmuCI GTSAC 2 cut(s) 97, 261
NruI TCGCGA 1 cut(s) 279
PceI AGGCCT 1 cut(s) 350
PcsI WCGNNNNNNNCGW 1 cut(s) 276
PfeI GAWTC 2 cut(s) 221, 302
PfoI TCCNGGA 1 cut(s) 150
PinAI ACCGGT 1 cut(s) 484
PkrI GCNGC 2 cut(s) 381, 604
PleI GAGTC 3 cut(s) 66, 275, 301
PpsI GAGTC 3 cut(s) 66, 275, 301
PsiI TTATAA 1 cut(s) 564
Psp6I CCWGG 3 cut(s) 37, 150, 534
PspFI CCCAGC 1 cut(s) 605
PspGI CCWGG 3 cut(s) 37, 150, 534
PspN4I GGNNCC 2 cut(s) 6, 639
PspPI GGNCC 3 cut(s) 292, 341, 487
RruI TCGCGA 1 cut(s) 279
RsaI GTAC 2 cut(s) 124, 467
RsaNI GTAC 2 cut(s) 123, 466
SaqAI TTAA 2 cut(s) 288, 372
SatI GCNGC 2 cut(s) 380, 603
Sau3AI GATC 5 cut(s) 54, 240, 331, 573, 609
Sau96I GGNCC 3 cut(s) 292, 341, 487
SchI GAGTC 3 cut(s) 66, 275, 301
ScrFI CCNGG 5 cut(s) 39, 152, 498, 536, 642
SexAI ACCWGGT 1 cut(s) 534
SfaNI GCATC 2 cut(s) 547, 588
SinI GGWCC 2 cut(s) 341, 487
Sse9I AATT 1 cut(s) 17
SseBI AGGCCT 1 cut(s) 350
SsiI CCGC 4 cut(s) 137, 299, 577, 629
SspMI CTAG 1 cut(s) 296
StuI AGGCCT 1 cut(s) 350
StyD4I CCNGG 5 cut(s) 37, 150, 496, 534, 640
StyI CCWWGG 1 cut(s) 252
TaaI ACNGT 2 cut(s) 97, 122
TaqI TCGA 4 cut(s) 57, 204, 224, 305
TaqII GACCGA 1 cut(s) 249
TasI AATT 1 cut(s) 17
TatI WGTACW 1 cut(s) 465
TfiI GAWTC 2 cut(s) 221, 302
Tru1I TTAA 2 cut(s) 288, 372
Tru9I TTAA 2 cut(s) 288, 372
TseFI GTSAC 2 cut(s) 97, 261
TseI GCWGC 2 cut(s) 379, 602
Tsp45I GTSAC 2 cut(s) 97, 261
VpaK11BI GGWCC 2 cut(s) 341, 487
XspI CTAG 1 cut(s) 296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.