Rw7G030260

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000558
Physical Location & Seq
Reverse (-)
42836906 .. 42838121
1216 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G030260.1

Sequence Viewer

Length: 780 bp
ATGCTAGAACTATCTGTACACCCCGTGGAGTTGAGGTTACAAAGAGAATGTGGGAGGTTTAGGCCACCTGATAGGCTGATACCCCTGCTCGAGCTGGCCAAACGACTCGTTGTCCACCACAACTTCACCGTCACCTTCCTCATCCCCAACGACGGTACGAACCTGACACCGCAAAAGAAAGTCCTGGAAGCTTTGCCGGAGAGCATATCCTCCACCTTCCTCCCTCCAGTCAACTTCGACGACCTCCCACCAGAATCAAAGGTGGAAACCAAGATCGCTCTCACCTTGGCTCGGTCACTCTTCGCTGTCCGCGACTCAGTTAAGGCCCTAGCGGAATCGACTCGACTGGTGGCGCTTGTTGTTGATCTCTTTGGTCCTGAGGCCTTTGATGTGGCCATTGAGTTTAATGTGCTGCCCTACCTTTTCTTCCCTACTTCGGCAATGGATTTGTGGTTTGTGTTTGAGTTGCCAAAGCTTGACGAGACTACTACTTGTGAGTACAGGGATTTGCCTGAACCGGTCCAGTATCCGGGTTGTGTGCCGTTGCATGGCAGAGGCTTAGCAGACCCGGTTCAAGATAGGAGCAATGATGCTTATAAGGCGCTGATCCGCATCAGCAAGAGGTACAAGTCGGCTGCTGGGATCATGGTGAATAGCTTTGCGGATTTGGAACCGGGTGCTTTCAAGGCTTTCAAGGACCAAGGACCAGGTCTTCGTCTTCCACCGGTTTACCCGGTAGGACCGGTTCGGTGGATGAGTTGGTTGAGAATGAGTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

259

Amino Acids

29.09

Weight (kDa)

6.13

Isoelectric Point (pI)

48.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64350
fragaria_vesca FvH4_5g04160 FvH4_5g04161 FvH4_5g04200 FvH4_5g04210 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211
malus_domestica MD06G1103300.v1.1 MD06G1103400.v1.1 MD06G1103500.v1.1 MD06G1103600.v1.1 MD06G1103700.v1.1 MD06G1116200.v1.1 MD14G1122800.v1.1 MD14G1133100.v1.1
prunus_persica Prupe.5G116100_v2.0.a1 Prupe.5G116300_v2.0.a1 Prupe.I001100_v2.0.a1
pyrus_communis pycom03g16970 pycom06g09790 pycom06g09810 pycom06g09830 pycom06g09840
rosa_chinensis RchiOBHm_Chr7g0195271 RchiOBHm_Chr7g0195281 RchiOBHm_Chr7g0195291 RchiOBHm_Chr7g0195301 RchiOBHm_Chr7g0195311 RchiOBHm_Chr7g0222791
rosa_laevigata RLG00000004129 RLG00000004130 RLG00000004133 RLG00000004134 RLG00000004135
rosa_multiflora Rmu_co8481937.1_g000001 Rmu_sc0002381.1_g000002 Rmu_sc0002381.1_g000003 Rmu_sc0002381.1_g000007 Rmu_sc0002881.1_g000005 Rmu_sc0007366.1_g000001 Rmu_sc0011789.1_g000001 Rmu_sc0039338.1_g000002 Rmu_sc0039339.1_g000002
rosa_roxburghii Rroxscaffold_3G00235780 Rroxscaffold_3G00260600 Rroxscaffold_3G00260620 Rroxscaffold_3G00260630
rosa_rugosa Rorug07G0022200 Rorug07G0022300 Rorug07G0022400 Rorug07G0022500 Rorug07G0022600 Rorug07G0216900
rosa_samantha Rh7AG149300 Rh7AG149400 Rh7AG149500 Rh7AG149600 Rh7AG149700 Rh7AG356800 Rh7BG150500 Rh7BG150600 Rh7BG150700 Rh7BG150800 Rh7BG150900 Rh7BG151200 Rh7BG350700 Rh7CG154100 Rh7CG154200 Rh7CG154300 Rh7CG154700 Rh7CG374200 Rh7DG150500 Rh7DG150600 Rh7DG150700 Rh7DG150800 Rh7DG150900
rosa_wichuraiana Rw7G012750 Rw7G012760 Rw7G012770 Rw7G012780 Rw7G030260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 597
AccII CGCG 1 cut(s) 312
AciI CCGC 5 cut(s) 170, 310, 332, 610, 662
AclWI GGATC 2 cut(s) 601, 650
AcoI YGGCCR 2 cut(s) 96, 393
AdeI CACNNNGTG 1 cut(s) 25
AfaI GTAC 4 cut(s) 18, 157, 500, 626
AfiI CCNNNNNNNGG 5 cut(s) 152, 291, 436, 529, 548
AgeI ACCGGT 3 cut(s) 517, 724, 742
AgsI TTSAA 3 cut(s) 575, 685, 694
AhdI GACNNNNNGTC 1 cut(s) 110
AjnI CCWGG 2 cut(s) 183, 706
AluBI AGCT 4 cut(s) 94, 191, 475, 657
AluI AGCT 4 cut(s) 94, 191, 475, 657
Alw26I GTCTC 1 cut(s) 476
AlwI GGATC 2 cut(s) 601, 650
Ama87I CYCGRG 1 cut(s) 89
AoxI GGCC 5 cut(s) 62, 96, 324, 381, 393
ApeKI GCWGC 2 cut(s) 412, 635
ArsI GACNNNNNNTTYG 2 cut(s) 696, 728
AsiGI ACCGGT 3 cut(s) 517, 724, 742
AspLEI GCGC 2 cut(s) 355, 604
AspS9I GGNCC 6 cut(s) 325, 374, 520, 697, 704, 740
AsuC2I CCSGG 4 cut(s) 531, 569, 675, 734
AsuHPI GGTGA 4 cut(s) 118, 124, 274, 661
AvaI CYCGRG 1 cut(s) 89
AvaII GGWCC 5 cut(s) 374, 520, 697, 704, 740
AxyI CCTNAGG 1 cut(s) 378
BalI TGGCCA 2 cut(s) 98, 395
BbsI GAAGAC 2 cut(s) 704, 710
BbvI GCAGC 2 cut(s) 399, 622
BceAI ACGGC 1 cut(s) 526
BciT130I CCWGG 2 cut(s) 185, 708
BciVI GTATCC 1 cut(s) 537
BcnI CCSGG 4 cut(s) 531, 569, 675, 734
BcoDI GTCTC 1 cut(s) 476
BfaI CTAG 2 cut(s) 5, 329
BfoI RGCGCY 2 cut(s) 356, 605
BfuI GTATCC 1 cut(s) 537
BisI GCNGC 2 cut(s) 413, 636
BlpI GCTNAGC 1 cut(s) 559
BlsI GCNGC 2 cut(s) 414, 637
Bme1390I CCNGG 6 cut(s) 185, 531, 569, 675, 708, 734
Bme18I GGWCC 5 cut(s) 374, 520, 697, 704, 740
BmeRI GACNNNNNGTC 1 cut(s) 110
BmeT110I CYCGRG 1 cut(s) 89
BmgT120I GGNCC 6 cut(s) 325, 374, 520, 697, 704, 740
BmiI GGNNCC 1 cut(s) 672
BmrFI CCNGG 6 cut(s) 185, 531, 569, 675, 708, 734
BmsI GCATC 2 cut(s) 580, 621
BpiI GAAGAC 2 cut(s) 704, 710
BpmI CTGGAG 1 cut(s) 210
Bpu1102I GCTNAGC 1 cut(s) 559
BpuMI CCSGG 4 cut(s) 531, 569, 675, 734
BsaBI GATNNNNATC 1 cut(s) 611
BsaJI CCNNGG 3 cut(s) 24, 285, 700
BsaWI WCCGGW 3 cut(s) 517, 724, 742
BsaXI ACNNNNNCTCC 2 cut(s) 20, 50
Bsc4I CCNNNNNNNGG 5 cut(s) 152, 291, 436, 529, 548
Bse118I RCCGGY 3 cut(s) 517, 724, 742
Bse1I ACTGG 3 cut(s) 227, 351, 523
Bse21I CCTNAGG 1 cut(s) 378
Bse3DI GCAATG 2 cut(s) 447, 592
Bse8I GATNNNNATC 1 cut(s) 611
BseBI CCWGG 2 cut(s) 185, 708
BseDI CCNNGG 3 cut(s) 24, 285, 700
BseGI GGATG 2 cut(s) 141, 759
BseJI GATNNNNATC 1 cut(s) 611
BseLI CCNNNNNNNGG 5 cut(s) 152, 291, 436, 529, 548
BseMI GCAATG 2 cut(s) 447, 592
BseMII CTCAG 2 cut(s) 330, 369
BseNI ACTGG 3 cut(s) 227, 351, 523
BseXI GCAGC 2 cut(s) 399, 622
BseYI CCCAGC 1 cut(s) 638
Bsh1236I CGCG 1 cut(s) 312
BshFI GGCC 5 cut(s) 64, 98, 326, 383, 395
BshTI ACCGGT 3 cut(s) 517, 724, 742
BsiHKCI CYCGRG 1 cut(s) 89
BsiSI CCGG 8 cut(s) 197, 518, 530, 569, 674, 725, 734, 743
BslI CCNNNNNNNGG 5 cut(s) 152, 291, 436, 529, 548
BsmAI GTCTC 1 cut(s) 476
BsnI GGCC 5 cut(s) 64, 98, 326, 383, 395
BsoBI CYCGRG 1 cut(s) 89
Bsp1407I TGTACA 1 cut(s) 16
Bsp143I GATC 4 cut(s) 273, 364, 606, 642
Bsp1720I GCTNAGC 1 cut(s) 559
BspACI CCGC 5 cut(s) 170, 310, 332, 610, 662
BspANI GGCC 5 cut(s) 64, 98, 326, 383, 395
BspCNI CTCAG 2 cut(s) 329, 370
BspFNI CGCG 1 cut(s) 312
BspLI GGNNCC 1 cut(s) 672
BspPI GGATC 2 cut(s) 601, 650
BsrDI GCAATG 2 cut(s) 447, 592
BsrFI RCCGGY 3 cut(s) 517, 724, 742
BsrGI TGTACA 1 cut(s) 16
BsrI ACTGG 3 cut(s) 227, 351, 523
BssAI RCCGGY 3 cut(s) 517, 724, 742
BssECI CCNNGG 3 cut(s) 24, 285, 700
BssMI GATC 4 cut(s) 273, 364, 606, 642
BssT1I CCWWGG 2 cut(s) 285, 700
Bst2UI CCWGG 2 cut(s) 185, 708
Bst4CI ACNGT 2 cut(s) 130, 155
Bst6I CTCTTC 1 cut(s) 305
BstAUI TGTACA 1 cut(s) 16
BstC8I GCNNGC 1 cut(s) 96
BstDEI CTNAG 3 cut(s) 316, 378, 559
BstDSI CCRYGG 1 cut(s) 24
BstF5I GGATG 2 cut(s) 141, 759
BstFNI CGCG 1 cut(s) 312
BstH2I RGCGCY 2 cut(s) 356, 605
BstHHI GCGC 2 cut(s) 355, 604
BstKTI GATC 4 cut(s) 276, 367, 609, 645
BstMAI GTCTC 1 cut(s) 476
BstMBI GATC 4 cut(s) 273, 364, 606, 642
BstMWI GCNNNNNNNGC 2 cut(s) 599, 686
BstNI CCWGG 2 cut(s) 185, 708
BstSCI CCNGG 6 cut(s) 183, 529, 567, 673, 706, 732
BstUI CGCG 1 cut(s) 312
BstV1I GCAGC 2 cut(s) 399, 622
BstV2I GAAGAC 2 cut(s) 704, 710
Bsu36I CCTNAGG 1 cut(s) 378
BsuI GTATCC 1 cut(s) 537
BsuRI GGCC 5 cut(s) 64, 98, 326, 383, 395
BtgI CCRYGG 1 cut(s) 24
BtsCI GGATG 2 cut(s) 141, 759
Cac8I GCNNGC 1 cut(s) 96
CfoI GCGC 2 cut(s) 355, 604
Cfr10I RCCGGY 3 cut(s) 517, 724, 742
Cfr13I GGNCC 6 cut(s) 325, 374, 520, 697, 704, 740
CsiI ACCWGGT 1 cut(s) 706
Csp6I GTAC 4 cut(s) 17, 156, 499, 625
CspAI ACCGGT 3 cut(s) 517, 724, 742
CviAII CATG 2 cut(s) 548, 646
CviQI GTAC 4 cut(s) 17, 156, 499, 625
DdeI CTNAG 3 cut(s) 316, 378, 559
DpnI GATC 4 cut(s) 275, 366, 608, 644
DpnII GATC 4 cut(s) 273, 364, 606, 642
DraIII CACNNNGTG 1 cut(s) 25
DriI GACNNNNNGTC 1 cut(s) 110
EaeI YGGCCR 2 cut(s) 96, 393
Eam1104I CTCTTC 1 cut(s) 305
Eam1105I GACNNNNNGTC 1 cut(s) 110
EarI CTCTTC 1 cut(s) 305
Eco130I CCWWGG 2 cut(s) 285, 700
Eco147I AGGCCT 1 cut(s) 383
Eco47I GGWCC 5 cut(s) 374, 520, 697, 704, 740
Eco81I CCTNAGG 1 cut(s) 378
Eco88I CYCGRG 1 cut(s) 89
EcoO109I RGGNCCY 1 cut(s) 325
EcoRII CCWGG 2 cut(s) 183, 706
EcoT14I CCWWGG 2 cut(s) 285, 700
ErhI CCWWGG 2 cut(s) 285, 700
FaeI CATG 2 cut(s) 551, 649
FaiI YATR 4 cut(s) 206, 549, 597, 647
FatI CATG 2 cut(s) 547, 645
Fnu4HI GCNGC 2 cut(s) 413, 636
FokI GGATG 2 cut(s) 128, 766
Fsp4HI GCNGC 2 cut(s) 413, 636
FspBI CTAG 2 cut(s) 5, 329
GlaI GCGC 2 cut(s) 354, 603
GluI GCNGC 2 cut(s) 413, 636
GsaI CCCAGC 1 cut(s) 642
GsuI CTGGAG 1 cut(s) 210
HaeII RGCGCY 2 cut(s) 356, 605
HaeIII GGCC 5 cut(s) 64, 98, 326, 383, 395
HapII CCGG 8 cut(s) 197, 518, 530, 569, 674, 725, 734, 743
HhaI GCGC 2 cut(s) 355, 604
Hin1II CATG 2 cut(s) 551, 649
Hin6I GCGC 2 cut(s) 353, 602
HinP1I GCGC 2 cut(s) 353, 602
HincII GTYRAC 1 cut(s) 232
HindII GTYRAC 1 cut(s) 232
HindIII AAGCTT 2 cut(s) 189, 473
HinfI GANTC 5 cut(s) 105, 254, 314, 335, 340
HpaII CCGG 8 cut(s) 197, 518, 530, 569, 674, 725, 734, 743
HphI GGTGA 4 cut(s) 118, 124, 274, 661
Hpy166II GTNNAC 4 cut(s) 19, 115, 232, 730
Hpy188III TCNNGA 2 cut(s) 377, 575
Hpy8I GTNNAC 4 cut(s) 19, 115, 232, 730
Hpy99I CGWCG 2 cut(s) 155, 242
HpyAV CCTTC 2 cut(s) 145, 226
HpyCH4III ACNGT 2 cut(s) 130, 155
HpyCH4V TGCA 1 cut(s) 547
HpyF10VI GCNNNNNNNGC 2 cut(s) 599, 686
HpyF3I CTNAG 3 cut(s) 316, 378, 559
Hsp92II CATG 2 cut(s) 551, 649
HspAI GCGC 2 cut(s) 353, 602
Kzo9I GATC 4 cut(s) 273, 364, 606, 642
LmnI GCTCC 1 cut(s) 582
Lsp1109I GCAGC 2 cut(s) 399, 622
LweI GCATC 2 cut(s) 580, 621
MabI ACCWGGT 1 cut(s) 706
MaeI CTAG 2 cut(s) 5, 329
MaeIII GTNAC 3 cut(s) 36, 130, 294
MalI GATC 4 cut(s) 275, 366, 608, 644
MboI GATC 4 cut(s) 273, 364, 606, 642
MboII GAAGA 4 cut(s) 292, 418, 704, 710
MlsI TGGCCA 2 cut(s) 98, 395
MluNI TGGCCA 2 cut(s) 98, 395
MlyI GAGTC 3 cut(s) 99, 308, 334
Mox20I TGGCCA 2 cut(s) 98, 395
MscI TGGCCA 2 cut(s) 98, 395
MseI TTAA 2 cut(s) 321, 405
Msp20I TGGCCA 2 cut(s) 98, 395
MspI CCGG 8 cut(s) 197, 518, 530, 569, 674, 725, 734, 743
MspR9I CCNGG 6 cut(s) 185, 531, 569, 675, 708, 734
MvaI CCWGG 2 cut(s) 185, 708
MvnI CGCG 1 cut(s) 312
MwoI GCNNNNNNNGC 2 cut(s) 599, 686
NciI CCSGG 4 cut(s) 531, 569, 675, 734
NdeII GATC 4 cut(s) 273, 364, 606, 642
NlaIII CATG 2 cut(s) 551, 649
NlaIV GGNNCC 1 cut(s) 672
NmuCI GTSAC 2 cut(s) 130, 294
PaeR7I CTCGAG 1 cut(s) 89
PceI AGGCCT 1 cut(s) 383
PcsI WCGNNNNNNNCGW 1 cut(s) 309
PfeI GAWTC 2 cut(s) 254, 335
PflFI GACNNNGTC 1 cut(s) 708
PfoI TCCNGGA 1 cut(s) 183
PinAI ACCGGT 3 cut(s) 517, 724, 742
PkrI GCNGC 2 cut(s) 414, 637
PleI GAGTC 3 cut(s) 99, 308, 334
PpsI GAGTC 3 cut(s) 99, 308, 334
PsiI TTATAA 1 cut(s) 597
Psp6I CCWGG 2 cut(s) 183, 706
PspFI CCCAGC 1 cut(s) 638
PspGI CCWGG 2 cut(s) 183, 706
PspN4I GGNNCC 1 cut(s) 672
PspPI GGNCC 6 cut(s) 325, 374, 520, 697, 704, 740
PspXI VCTCGAGB 1 cut(s) 89
PsrI GAACNNNNNNTAC 3 cut(s) 32, 729, 761
PsyI GACNNNGTC 1 cut(s) 708
RsaI GTAC 4 cut(s) 18, 157, 500, 626
RsaNI GTAC 4 cut(s) 17, 156, 499, 625
SaqAI TTAA 2 cut(s) 321, 405
SatI GCNGC 2 cut(s) 413, 636
Sau3AI GATC 4 cut(s) 273, 364, 606, 642
Sau96I GGNCC 6 cut(s) 325, 374, 520, 697, 704, 740
SchI GAGTC 3 cut(s) 99, 308, 334
ScrFI CCNGG 6 cut(s) 185, 531, 569, 675, 708, 734
SexAI ACCWGGT 1 cut(s) 706
SfaNI GCATC 2 cut(s) 580, 621
Sfr274I CTCGAG 1 cut(s) 89
SinI GGWCC 5 cut(s) 374, 520, 697, 704, 740
SlaI CTCGAG 1 cut(s) 89
SmlI CTYRAG 1 cut(s) 89
SmoI CTYRAG 1 cut(s) 89
SseBI AGGCCT 1 cut(s) 383
SsiI CCGC 5 cut(s) 170, 310, 332, 610, 662
SspMI CTAG 2 cut(s) 5, 329
StuI AGGCCT 1 cut(s) 383
StyD4I CCNGG 6 cut(s) 183, 529, 567, 673, 706, 732
StyI CCWWGG 2 cut(s) 285, 700
TaaI ACNGT 2 cut(s) 130, 155
TaqI TCGA 4 cut(s) 90, 237, 338, 343
TaqII GACCGA 1 cut(s) 282
TatI WGTACW 2 cut(s) 16, 498
TfiI GAWTC 2 cut(s) 254, 335
Tru1I TTAA 2 cut(s) 321, 405
Tru9I TTAA 2 cut(s) 321, 405
TseFI GTSAC 2 cut(s) 130, 294
TseI GCWGC 2 cut(s) 412, 635
Tsp45I GTSAC 2 cut(s) 130, 294
Tth111I GACNNNGTC 1 cut(s) 708
VpaK11BI GGWCC 5 cut(s) 374, 520, 697, 704, 740
XhoI CTCGAG 1 cut(s) 89
XspI CTAG 2 cut(s) 5, 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.