Rh7BG150800

transferase activity, transferring hexosyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000558
Physical Location & Seq
Reverse (-)
11170525 .. 11171928
1404 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG150800.1

Sequence Viewer

Length: 1200 bp
ATGAAACCAGCCCATGTCGCCATTGTCCCAAGTCCAGGTATAGGTCATCTCATTCCCCTCGTTGAGCTAGCCAAACGACTTGTCGTCCACCACCACTTCAGCGTCACCTTCTTCATCCCCAGCGACGACGGATCAAACTTGACACCCCACAGGAAAGTTCTAGATGTCTTGCCCCAATCCATATCCTCCACCTTTCTCCCTCCTGCAAACTTTGACGACCTCCCTAAGGACATTAAGCACTTAACCAGAATCGCTCTCACCATGACTCGGTCCCTCCCTGCTCTTCGTGACTCGATCAAGGCCCTAGCCGAGTCGACTCGTCTGGTTGCCCTAGTGGTTGATCTTTTTGGCGGGGATGCTTTTGATGTGGCTAAGGAATTCGATATACTTCCCTACATTTTGTACCCTACAAATGCTATGGTATTGTGGTTTCAGTTTGAATTGCCAAAGCTCGACCAGACCATTTCTTGTGAGTACAGGGACTTGCCTGAACCGGTCAAACTCCCGGGATGTGTGCCGATCTACGGTAAAAATTTGTTAGACTCGGTTCAAGATAGGACCAACCAAGCCTACAAAGTGCTTATTGACGTTTCTAAGAGGTACAAGTCGGCTGCTGGGATCATGATCAATAGCTTTGTGGATTTGCAACCGGGTGCTTTCAAGGCTTTCAAAGAACAAGGACAAGGTCTTGGTCTTCCACCAATTTACCCGGTCGGACCGATAACAGAGACTGGTTCGACCAATGAGAATGCTTGTTTGAGCTGGTTAGATATGCAGCCTAATGGATCAGTGTTATTTATTTCATTTGGGAGTGGTGGCACCATCTCAAGTGAGCAAATGAATGAGTTGGCACTAGGGCTTGAAAAGAGCAGGGTGAGATTTATTTGGAATTTCAAGTGTCCAAATGAGACATCAAAAAATGCAGCTTACTTTGGTGTTCAAAAGCAACGAATGAATGCAGTTTTGTTAGCTCAAGATTTGAAGGTGGCGTGGAGGGTTAAGATGAACGATAAGGGCATTGTAGAGAGTCAAGACATTGCCAAATATGCAAAGGGCCTAATTGAAGGAGAAGAAGGGAAAGTGCTCAGAAAGAGGATGATAGAGCTAAAAGAGGCATCCCAAATGGCTTTGAGCCAAGATGGGTCTTCTACAAAATCACTTGCGGAGGTAGCTCAGATATGGAAGGATCACAAGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

399

Amino Acids

44.21

Weight (kDa)

8.18

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64350
fragaria_vesca FvH4_5g04160 FvH4_5g04161 FvH4_5g04200 FvH4_5g04210 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211
malus_domestica MD06G1103300.v1.1 MD06G1103400.v1.1 MD06G1103500.v1.1 MD06G1103600.v1.1 MD06G1103700.v1.1 MD06G1116200.v1.1 MD14G1122800.v1.1 MD14G1133100.v1.1
prunus_persica Prupe.5G116100_v2.0.a1 Prupe.5G116300_v2.0.a1 Prupe.I001100_v2.0.a1
pyrus_communis pycom03g16970 pycom06g09790 pycom06g09810 pycom06g09830 pycom06g09840
rosa_chinensis RchiOBHm_Chr7g0195271 RchiOBHm_Chr7g0195281 RchiOBHm_Chr7g0195291 RchiOBHm_Chr7g0195301 RchiOBHm_Chr7g0195311 RchiOBHm_Chr7g0222791
rosa_laevigata RLG00000004129 RLG00000004130 RLG00000004133 RLG00000004134 RLG00000004135
rosa_multiflora Rmu_co8481937.1_g000001 Rmu_sc0002381.1_g000002 Rmu_sc0002381.1_g000003 Rmu_sc0002381.1_g000007 Rmu_sc0002881.1_g000005 Rmu_sc0007366.1_g000001 Rmu_sc0011789.1_g000001 Rmu_sc0039338.1_g000002 Rmu_sc0039339.1_g000002
rosa_roxburghii Rroxscaffold_3G00235780 Rroxscaffold_3G00260600 Rroxscaffold_3G00260620 Rroxscaffold_3G00260630
rosa_rugosa Rorug07G0022200 Rorug07G0022300 Rorug07G0022400 Rorug07G0022500 Rorug07G0022600 Rorug07G0216900
rosa_samantha Rh7AG149300 Rh7AG149400 Rh7AG149500 Rh7AG149600 Rh7AG149700 Rh7AG356800 Rh7BG150500 Rh7BG150600 Rh7BG150700 Rh7BG150800 Rh7BG150900 Rh7BG151200 Rh7BG350700 Rh7CG154100 Rh7CG154200 Rh7CG154300 Rh7CG154700 Rh7CG374200 Rh7DG150500 Rh7DG150600 Rh7DG150700 Rh7DG150800 Rh7DG150900
rosa_wichuraiana Rw7G012750 Rw7G012760 Rw7G012770 Rw7G012780 Rw7G030260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 818
AccI GTMKAC 1 cut(s) 314
AciI CCGC 2 cut(s) 351, 1163
AclWI GGATC 4 cut(s) 139, 626, 793, 1194
AcsI RAATTY 3 cut(s) 377, 532, 889
AcuI CTGAAG 1 cut(s) 82
AfaI GTAC 3 cut(s) 404, 476, 602
AfiI CCNNNNNNNGG 5 cut(s) 35, 41, 226, 267, 524
AgeI ACCGGT 1 cut(s) 493
AgsI TTSAA 9 cut(s) 440, 551, 661, 670, 863, 895, 941, 982, 1064
AhdI GACNNNNNGTC 1 cut(s) 83
AjnI CCWGG 1 cut(s) 34
AluBI AGCT 8 cut(s) 67, 451, 633, 762, 926, 971, 1105, 1172
AluI AGCT 8 cut(s) 67, 451, 633, 762, 926, 971, 1105, 1172
Alw21I GWGCWC 1 cut(s) 1086
Alw26I GTCTC 2 cut(s) 722, 902
AlwI GGATC 4 cut(s) 139, 626, 793, 1194
AlwNI CAGNNNCTG 1 cut(s) 731
Ama87I CYCGRG 1 cut(s) 505
AoxI GGCC 2 cut(s) 300, 1054
ApeKI GCWGC 3 cut(s) 611, 775, 923
ApoI RAATTY 3 cut(s) 377, 532, 889
ArsI GACNNNNNNTTYG 2 cut(s) 66, 98
AsiGI ACCGGT 1 cut(s) 493
AspS9I GGNCC 5 cut(s) 270, 301, 558, 716, 1054
AsuC2I CCSGG 4 cut(s) 506, 507, 651, 710
AsuHPI GGTGA 3 cut(s) 97, 250, 886
AsuNHI GCTAGC 1 cut(s) 67
AvaI CYCGRG 1 cut(s) 505
AvaII GGWCC 3 cut(s) 270, 558, 716
AxyI CCTNAGG 1 cut(s) 225
BanI GGYRCC 1 cut(s) 818
BbsI GAAGAC 2 cut(s) 686, 1137
Bbv12I GWGCWC 1 cut(s) 1086
BbvI GCAGC 3 cut(s) 598, 787, 935
BccI CCATC 2 cut(s) 830, 1133
BciT130I CCWGG 1 cut(s) 36
BclI TGATCA 1 cut(s) 624
BcnI CCSGG 4 cut(s) 506, 507, 651, 710
BcoDI GTCTC 2 cut(s) 722, 902
BfaI CTAG 5 cut(s) 68, 161, 305, 332, 854
BisI GCNGC 3 cut(s) 612, 776, 924
BlsI GCNGC 3 cut(s) 613, 777, 925
Bme1390I CCNGG 5 cut(s) 36, 506, 507, 651, 710
Bme18I GGWCC 3 cut(s) 270, 558, 716
BmeRI GACNNNNNGTC 1 cut(s) 83
BmeT110I CYCGRG 1 cut(s) 505
BmgT120I GGNCC 5 cut(s) 270, 301, 558, 716, 1054
BmiI GGNNCC 2 cut(s) 272, 820
BmrFI CCNGG 5 cut(s) 36, 506, 507, 651, 710
BmsI GCATC 2 cut(s) 346, 1124
BmtI GCTAGC 1 cut(s) 71
BpiI GAAGAC 2 cut(s) 686, 1137
Bpu10I CCTNAGC 1 cut(s) 372
BpuEI CTTGAG 2 cut(s) 811, 957
BpuMI CCSGG 4 cut(s) 506, 507, 651, 710
BsaBI GATNNNNATC 1 cut(s) 623
BsaJI CCNNGG 1 cut(s) 505
BsaWI WCCGGW 1 cut(s) 493
Bsc4I CCNNNNNNNGG 5 cut(s) 35, 41, 226, 267, 524
Bse118I RCCGGY 1 cut(s) 493
Bse1I ACTGG 1 cut(s) 736
Bse21I CCTNAGG 1 cut(s) 225
Bse3DI GCAATG 1 cut(s) 1035
Bse8I GATNNNNATC 1 cut(s) 623
BseBI CCWGG 1 cut(s) 36
BseDI CCNNGG 1 cut(s) 505
BseGI GGATG 5 cut(s) 114, 361, 515, 1101, 1115
BseJI GATNNNNATC 1 cut(s) 623
BseLI CCNNNNNNNGG 5 cut(s) 35, 41, 226, 267, 524
BseMI GCAATG 1 cut(s) 1035
BseMII CTCAG 2 cut(s) 1099, 1187
BseNI ACTGG 1 cut(s) 736
BseXI GCAGC 3 cut(s) 598, 787, 935
BseYI CCCAGC 2 cut(s) 119, 614
Bsh1285I CGRYCG 1 cut(s) 714
BshFI GGCC 2 cut(s) 302, 1056
BshNI GGYRCC 1 cut(s) 818
BshTI ACCGGT 1 cut(s) 493
BsiEI CGRYCG 1 cut(s) 714
BsiHKAI GWGCWC 1 cut(s) 1086
BsiHKCI CYCGRG 1 cut(s) 505
BsiSI CCGG 4 cut(s) 494, 506, 650, 710
BslFI GGGAC 3 cut(s) 11, 256, 494
BslI CCNNNNNNNGG 5 cut(s) 35, 41, 226, 267, 524
BsmAI GTCTC 2 cut(s) 722, 902
BsmFI GGGAC 3 cut(s) 11, 256, 494
BsmI GAATGC 2 cut(s) 754, 961
BsnI GGCC 2 cut(s) 302, 1056
BsoBI CYCGRG 1 cut(s) 505
Bsp1286I GDGCHC 1 cut(s) 1086
Bsp143I GATC 8 cut(s) 131, 294, 340, 519, 618, 624, 785, 1186
BspACI CCGC 2 cut(s) 351, 1163
BspANI GGCC 2 cut(s) 302, 1056
BspCNI CTCAG 2 cut(s) 1098, 1186
BspHI TCATGA 1 cut(s) 621
BspLI GGNNCC 2 cut(s) 272, 820
BspOI GCTAGC 1 cut(s) 71
BspPI GGATC 4 cut(s) 139, 626, 793, 1194
BspQI GCTCTTC 1 cut(s) 288
BspT107I GGYRCC 1 cut(s) 818
BsrDI GCAATG 1 cut(s) 1035
BsrFI RCCGGY 1 cut(s) 493
BsrI ACTGG 1 cut(s) 736
BssAI RCCGGY 1 cut(s) 493
BssECI CCNNGG 1 cut(s) 505
BssMI GATC 8 cut(s) 131, 294, 340, 519, 618, 624, 785, 1186
Bst2UI CCWGG 1 cut(s) 36
Bst4CI ACNGT 1 cut(s) 527
Bst6I CTCTTC 1 cut(s) 288
BstC8I GCNNGC 1 cut(s) 69
BstDEI CTNAG 5 cut(s) 225, 372, 594, 1085, 1173
BstENI CCTNNNNNAGG 1 cut(s) 224
BstF5I GGATG 5 cut(s) 114, 361, 515, 1101, 1115
BstKTI GATC 8 cut(s) 134, 297, 343, 522, 621, 627, 788, 1189
BstMAI GTCTC 2 cut(s) 722, 902
BstMBI GATC 8 cut(s) 131, 294, 340, 519, 618, 624, 785, 1186
BstMCI CGRYCG 1 cut(s) 714
BstMWI GCNNNNNNNGC 4 cut(s) 17, 662, 1046, 1169
BstNI CCWGG 1 cut(s) 36
BstSCI CCNGG 5 cut(s) 34, 504, 505, 649, 708
BstV1I GCAGC 3 cut(s) 598, 787, 935
BstV2I GAAGAC 2 cut(s) 686, 1137
Bsu36I CCTNAGG 1 cut(s) 225
BsuRI GGCC 2 cut(s) 302, 1056
BtsCI GGATG 5 cut(s) 114, 361, 515, 1101, 1115
BtsIMutI CAGTG 1 cut(s) 795
Cac8I GCNNGC 1 cut(s) 69
CaiI CAGNNNCTG 1 cut(s) 731
CciI TCATGA 1 cut(s) 621
Cfr10I RCCGGY 1 cut(s) 493
Cfr13I GGNCC 5 cut(s) 270, 301, 558, 716, 1054
Cfr9I CCCGGG 1 cut(s) 505
CpoI CGGWCCG 1 cut(s) 716
CseI GACGC 1 cut(s) 91
Csp6I GTAC 3 cut(s) 403, 475, 601
CspAI ACCGGT 1 cut(s) 493
CspI CGGWCCG 1 cut(s) 716
CviAII CATG 3 cut(s) 14, 262, 622
CviQI GTAC 3 cut(s) 403, 475, 601
DdeI CTNAG 5 cut(s) 225, 372, 594, 1085, 1173
DpnI GATC 8 cut(s) 133, 296, 342, 521, 620, 626, 787, 1188
DpnII GATC 8 cut(s) 131, 294, 340, 519, 618, 624, 785, 1186
DriI GACNNNNNGTC 1 cut(s) 83
Eam1104I CTCTTC 1 cut(s) 288
Eam1105I GACNNNNNGTC 1 cut(s) 83
EarI CTCTTC 1 cut(s) 288
Eco47I GGWCC 3 cut(s) 270, 558, 716
Eco57I CTGAAG 1 cut(s) 82
Eco81I CCTNAGG 1 cut(s) 225
Eco88I CYCGRG 1 cut(s) 505
EcoNI CCTNNNNNAGG 1 cut(s) 224
EcoO109I RGGNCCY 2 cut(s) 301, 1054
EcoRI GAATTC 1 cut(s) 377
EcoRII CCWGG 1 cut(s) 34
FaeI CATG 3 cut(s) 17, 265, 625
FaqI GGGAC 3 cut(s) 11, 256, 494
FatI CATG 3 cut(s) 13, 261, 621
FauI CCCGC 1 cut(s) 344
FbaI TGATCA 1 cut(s) 624
FblI GTMKAC 1 cut(s) 314
Fnu4HI GCNGC 3 cut(s) 612, 776, 924
FokI GGATG 5 cut(s) 101, 368, 522, 1102, 1108
Fsp4HI GCNGC 3 cut(s) 612, 776, 924
FspBI CTAG 5 cut(s) 68, 161, 305, 332, 854
GluI GCNGC 3 cut(s) 612, 776, 924
GsaI CCCAGC 2 cut(s) 123, 618
HaeIII GGCC 2 cut(s) 302, 1056
HapII CCGG 4 cut(s) 494, 506, 650, 710
HgaI GACGC 1 cut(s) 91
Hin1II CATG 3 cut(s) 17, 265, 625
HincII GTYRAC 1 cut(s) 315
HindII GTYRAC 1 cut(s) 315
HinfI GANTC 7 cut(s) 249, 265, 290, 311, 316, 542, 1027
HpaII CCGG 4 cut(s) 494, 506, 650, 710
HphI GGTGA 3 cut(s) 97, 250, 886
Hpy166II GTNNAC 2 cut(s) 88, 315
Hpy188I TCNGA 3 cut(s) 716, 1088, 1176
Hpy188III TCNNGA 6 cut(s) 161, 287, 551, 622, 974, 1031
Hpy8I GTNNAC 2 cut(s) 88, 315
Hpy99I CGWCG 2 cut(s) 128, 131
HpyAV CCTTC 5 cut(s) 118, 976, 1058, 1067, 1177
HpyCH4III ACNGT 1 cut(s) 527
HpyCH4IV ACGT 1 cut(s) 588
HpyCH4V TGCA 6 cut(s) 206, 646, 775, 923, 959, 1049
HpyF10VI GCNNNNNNNGC 4 cut(s) 17, 662, 1046, 1169
HpyF3I CTNAG 5 cut(s) 225, 372, 594, 1085, 1173
HpySE526I ACGT 1 cut(s) 588
Hsp92II CATG 3 cut(s) 17, 265, 625
Ksp22I TGATCA 1 cut(s) 624
Kzo9I GATC 8 cut(s) 131, 294, 340, 519, 618, 624, 785, 1186
LguI GCTCTTC 1 cut(s) 288
Lsp1109I GCAGC 3 cut(s) 598, 787, 935
LweI GCATC 2 cut(s) 346, 1124
MaeI CTAG 5 cut(s) 68, 161, 305, 332, 854
MaeII ACGT 1 cut(s) 588
MaeIII GTNAC 2 cut(s) 103, 287
MalI GATC 8 cut(s) 133, 296, 342, 521, 620, 626, 787, 1188
MboI GATC 8 cut(s) 131, 294, 340, 519, 618, 624, 785, 1186
MboII GAAGA 5 cut(s) 103, 275, 686, 1082, 1137
MhlI GDGCHC 1 cut(s) 1086
MluCI AATT 6 cut(s) 377, 440, 532, 702, 889, 1059
MlyI GAGTC 6 cut(s) 259, 284, 310, 320, 536, 1036
MmeI TCCRAC 1 cut(s) 694
MseI TTAA 3 cut(s) 234, 242, 999
MspI CCGG 4 cut(s) 494, 506, 650, 710
MspR9I CCNGG 5 cut(s) 36, 506, 507, 651, 710
Mva1269I GAATGC 2 cut(s) 754, 961
MvaI CCWGG 1 cut(s) 36
MwoI GCNNNNNNNGC 4 cut(s) 17, 662, 1046, 1169
NciI CCSGG 4 cut(s) 506, 507, 651, 710
NdeII GATC 8 cut(s) 131, 294, 340, 519, 618, 624, 785, 1186
NheI GCTAGC 1 cut(s) 67
NlaIII CATG 3 cut(s) 17, 265, 625
NlaIV GGNNCC 2 cut(s) 272, 820
NmeAIII GCCGAG 1 cut(s) 334
NmuCI GTSAC 2 cut(s) 103, 287
PagI TCATGA 1 cut(s) 621
PciSI GCTCTTC 1 cut(s) 288
PctI GAATGC 2 cut(s) 754, 961
PfeI GAWTC 1 cut(s) 249
PflFI GACNNNGTC 2 cut(s) 268, 684
PinAI ACCGGT 1 cut(s) 493
PkrI GCNGC 3 cut(s) 613, 777, 925
PleI GAGTC 6 cut(s) 259, 284, 310, 319, 536, 1035
PpsI GAGTC 6 cut(s) 259, 284, 310, 319, 536, 1035
Psp6I CCWGG 1 cut(s) 34
PspFI CCCAGC 2 cut(s) 119, 614
PspGI CCWGG 1 cut(s) 34
PspN4I GGNNCC 2 cut(s) 272, 820
PspPI GGNCC 5 cut(s) 270, 301, 558, 716, 1054
PstNI CAGNNNCTG 1 cut(s) 731
PsyI GACNNNGTC 2 cut(s) 268, 684
RsaI GTAC 3 cut(s) 404, 476, 602
RsaNI GTAC 3 cut(s) 403, 475, 601
Rsr2I CGGWCCG 1 cut(s) 716
RsrII CGGWCCG 1 cut(s) 716
SalI GTCGAC 1 cut(s) 313
SapI GCTCTTC 1 cut(s) 288
SaqAI TTAA 3 cut(s) 234, 242, 999
SatI GCNGC 3 cut(s) 612, 776, 924
Sau3AI GATC 8 cut(s) 131, 294, 340, 519, 618, 624, 785, 1186
Sau96I GGNCC 5 cut(s) 270, 301, 558, 716, 1054
SchI GAGTC 6 cut(s) 259, 284, 310, 320, 536, 1036
ScrFI CCNGG 5 cut(s) 36, 506, 507, 651, 710
SduI GDGCHC 1 cut(s) 1086
SfaNI GCATC 2 cut(s) 346, 1124
SinI GGWCC 3 cut(s) 270, 558, 716
SmaI CCCGGG 1 cut(s) 507
SmlI CTYRAG 2 cut(s) 826, 972
SmoI CTYRAG 2 cut(s) 826, 972
Sse9I AATT 6 cut(s) 377, 440, 532, 702, 889, 1059
SsiI CCGC 2 cut(s) 351, 1163
SspMI CTAG 5 cut(s) 68, 161, 305, 332, 854
StyD4I CCNGG 5 cut(s) 34, 504, 505, 649, 708
TaaI ACNGT 1 cut(s) 527
TaiI ACGT 1 cut(s) 591
TaqI TCGA 5 cut(s) 293, 314, 381, 453, 737
TaqII GACCGA 2 cut(s) 258, 733
TasI AATT 6 cut(s) 377, 440, 532, 702, 889, 1059
TatI WGTACW 1 cut(s) 474
TfiI GAWTC 1 cut(s) 249
Tru1I TTAA 3 cut(s) 234, 242, 999
Tru9I TTAA 3 cut(s) 234, 242, 999
TscAI CASTG 1 cut(s) 795
TseFI GTSAC 2 cut(s) 103, 287
TseI GCWGC 3 cut(s) 611, 775, 923
Tsp45I GTSAC 2 cut(s) 103, 287
TspDTI ATGAA 6 cut(s) 17, 103, 792, 854, 968, 1019
TspGWI ACGGA 1 cut(s) 144
TspMI CCCGGG 1 cut(s) 505
TspRI CASTG 1 cut(s) 795
Tth111I GACNNNGTC 2 cut(s) 268, 684
VpaK11BI GGWCC 3 cut(s) 270, 558, 716
XagI CCTNNNNNAGG 1 cut(s) 224
XapI RAATTY 3 cut(s) 377, 532, 889
XbaI TCTAGA 1 cut(s) 160
XmaI CCCGGG 1 cut(s) 505
XmiI GTMKAC 1 cut(s) 314
XspI CTAG 5 cut(s) 68, 161, 305, 332, 854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.