Rh7CG154700

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000558
Physical Location & Seq
Reverse (-)
12707704 .. 12708234
531 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG154700.1

Sequence Viewer

Length: 531 bp
ATGGCAGCCGGCCACGTCGCCATTGTCCCAAGTCCAGGTTTTGGCCACCTCATTCCGCTCACCGAGCTGGCCAAACGACTCTTCGTCCACCACAACTTCACCGTCACCTTCTTCATCCCCAACGACGGCACGAACCTGACTCTGCAAAAGAAAATCCTGGAAGCTTTGCCGGAGACCATATCCTCCACCTTCCTCCCTCCCATCAACTTAGACGACGTCCCACCAGAATCGATGATGGAAACCAAGATCGCTCTCACCTTGACTCGGTCACTCTCCGCTATCCGTGACTCAGTTAAGGCCCTAGCGGAGTCGACTCGGCTGGTGGCGCTTGTTGTTGATGTCTTTGGTCTTGAGGCCTTTGATGTGGCCAATGAGCTCAATTTGCTGCCCTATCTTTTCTTTCCTTCTACGGCGATGGGTTTGTGGCTTGTGTTTGAGTTGCCAAAGCTTGACGAGACTACTACTTGTGAGTACAGCCTGAACCGGTCCGGCTTCCGGGTTGTGTGCCGCTACATGGCAGAGATTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

176

Amino Acids

19.51

Weight (kDa)

5.15

Isoelectric Point (pI)

46.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64350
fragaria_vesca FvH4_5g04160 FvH4_5g04161 FvH4_5g04200 FvH4_5g04210 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211
malus_domestica MD06G1103300.v1.1 MD06G1103400.v1.1 MD06G1103500.v1.1 MD06G1103600.v1.1 MD06G1103700.v1.1 MD06G1116200.v1.1 MD14G1122800.v1.1 MD14G1133100.v1.1
prunus_persica Prupe.5G116100_v2.0.a1 Prupe.5G116300_v2.0.a1 Prupe.I001100_v2.0.a1
pyrus_communis pycom03g16970 pycom06g09790 pycom06g09810 pycom06g09830 pycom06g09840
rosa_chinensis RchiOBHm_Chr7g0195271 RchiOBHm_Chr7g0195281 RchiOBHm_Chr7g0195291 RchiOBHm_Chr7g0195301 RchiOBHm_Chr7g0195311 RchiOBHm_Chr7g0222791
rosa_laevigata RLG00000004129 RLG00000004130 RLG00000004133 RLG00000004134 RLG00000004135
rosa_multiflora Rmu_co8481937.1_g000001 Rmu_sc0002381.1_g000002 Rmu_sc0002381.1_g000003 Rmu_sc0002381.1_g000007 Rmu_sc0002881.1_g000005 Rmu_sc0007366.1_g000001 Rmu_sc0011789.1_g000001 Rmu_sc0039338.1_g000002 Rmu_sc0039339.1_g000002
rosa_roxburghii Rroxscaffold_3G00235780 Rroxscaffold_3G00260600 Rroxscaffold_3G00260620 Rroxscaffold_3G00260630
rosa_rugosa Rorug07G0022200 Rorug07G0022300 Rorug07G0022400 Rorug07G0022500 Rorug07G0022600 Rorug07G0216900
rosa_samantha Rh7AG149300 Rh7AG149400 Rh7AG149500 Rh7AG149600 Rh7AG149700 Rh7AG356800 Rh7BG150500 Rh7BG150600 Rh7BG150700 Rh7BG150800 Rh7BG150900 Rh7BG151200 Rh7BG350700 Rh7CG154100 Rh7CG154200 Rh7CG154300 Rh7CG154700 Rh7CG374200 Rh7DG150500 Rh7DG150600 Rh7DG150700 Rh7DG150800 Rh7DG150900
rosa_wichuraiana Rw7G012750 Rw7G012760 Rw7G012770 Rw7G012780 Rw7G030260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 219
AccB7I CCANNNNNTGG 1 cut(s) 41
AccBSI CCGCTC 1 cut(s) 58
AccI GTMKAC 1 cut(s) 311
AciI CCGC 4 cut(s) 56, 276, 305, 508
AcoI YGGCCR 4 cut(s) 10, 43, 69, 366
AcyI GRCGYC 1 cut(s) 216
AfaI GTAC 1 cut(s) 473
AfiI CCNNNNNNNGG 6 cut(s) 35, 41, 125, 264, 495, 514
AgeI ACCGGT 1 cut(s) 483
AhdI GACNNNNNGTC 1 cut(s) 83
AjiI CACGTC 1 cut(s) 16
AjnI CCWGG 2 cut(s) 34, 156
AjuI GAANNNNNNNTTGG 2 cut(s) 65, 97
AluBI AGCT 4 cut(s) 67, 164, 376, 448
AluI AGCT 4 cut(s) 67, 164, 376, 448
Alw21I GWGCWC 1 cut(s) 378
Alw26I GTCTC 2 cut(s) 167, 449
AoxI GGCC 6 cut(s) 10, 43, 69, 297, 354, 366
ApeKI GCWGC 2 cut(s) 5, 385
AsiGI ACCGGT 1 cut(s) 483
AspLEI GCGC 1 cut(s) 328
AspS9I GGNCC 2 cut(s) 298, 486
AsuC2I CCSGG 1 cut(s) 497
AsuHPI GGTGA 4 cut(s) 52, 91, 97, 247
AvaII GGWCC 1 cut(s) 486
BalI TGGCCA 3 cut(s) 45, 71, 368
BanII GRGCYC 1 cut(s) 378
Bbv12I GWGCWC 1 cut(s) 378
BbvI GCAGC 2 cut(s) 17, 372
BccI CCATC 3 cut(s) 209, 229, 409
BceAI ACGGC 2 cut(s) 142, 426
BciT130I CCWGG 2 cut(s) 36, 158
BcnI CCSGG 1 cut(s) 497
BcoDI GTCTC 2 cut(s) 167, 449
BfaI CTAG 1 cut(s) 302
BfoI RGCGCY 1 cut(s) 329
BisI GCNGC 3 cut(s) 6, 386, 508
BlsI GCNGC 3 cut(s) 7, 387, 509
Bme1390I CCNGG 3 cut(s) 36, 158, 497
Bme18I GGWCC 1 cut(s) 486
BmeRI GACNNNNNGTC 1 cut(s) 83
BmgBI CACGTC 1 cut(s) 16
BmgT120I GGNCC 2 cut(s) 298, 486
BmrFI CCNGG 3 cut(s) 36, 158, 497
BpuEI CTTGAG 1 cut(s) 371
BpuMI CCSGG 1 cut(s) 497
Bsa29I ATCGAT 1 cut(s) 230
BsaHI GRCGYC 1 cut(s) 216
BsaI GGTCTC 1 cut(s) 167
BsaWI WCCGGW 1 cut(s) 483
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 41, 125, 264, 495, 514
Bse118I RCCGGY 2 cut(s) 8, 483
BseBI CCWGG 2 cut(s) 36, 158
BseCI ATCGAT 1 cut(s) 230
BseGI GGATG 1 cut(s) 114
BseLI CCNNNNNNNGG 6 cut(s) 35, 41, 125, 264, 495, 514
BseMII CTCAG 1 cut(s) 303
BseXI GCAGC 2 cut(s) 17, 372
BshFI GGCC 6 cut(s) 12, 45, 71, 299, 356, 368
BshTI ACCGGT 1 cut(s) 483
BshVI ATCGAT 1 cut(s) 230
BsiHKAI GWGCWC 1 cut(s) 378
BsiSI CCGG 5 cut(s) 9, 170, 484, 489, 496
BslFI GGGAC 2 cut(s) 11, 203
BslI CCNNNNNNNGG 6 cut(s) 35, 41, 125, 264, 495, 514
BsmAI GTCTC 2 cut(s) 167, 449
BsmFI GGGAC 2 cut(s) 11, 203
BsnI GGCC 6 cut(s) 12, 45, 71, 299, 356, 368
Bso31I GGTCTC 1 cut(s) 167
Bsp1286I GDGCHC 1 cut(s) 378
Bsp143I GATC 1 cut(s) 246
BspACI CCGC 4 cut(s) 56, 276, 305, 508
BspANI GGCC 6 cut(s) 12, 45, 71, 299, 356, 368
BspCNI CTCAG 1 cut(s) 302
BspDI ATCGAT 1 cut(s) 230
BspTNI GGTCTC 1 cut(s) 167
BsrBI CCGCTC 1 cut(s) 58
BsrFI RCCGGY 2 cut(s) 8, 483
BssAI RCCGGY 2 cut(s) 8, 483
BssMI GATC 1 cut(s) 246
BssNI GRCGYC 1 cut(s) 216
Bst2UI CCWGG 2 cut(s) 36, 158
Bst4CI ACNGT 1 cut(s) 103
Bst6I CTCTTC 1 cut(s) 86
BstACI GRCGYC 1 cut(s) 216
BstC8I GCNNGC 2 cut(s) 10, 69
BstDEI CTNAG 2 cut(s) 208, 289
BstF5I GGATG 1 cut(s) 114
BstH2I RGCGCY 1 cut(s) 329
BstHHI GCGC 1 cut(s) 328
BstKTI GATC 1 cut(s) 249
BstMAI GTCTC 2 cut(s) 167, 449
BstMBI GATC 1 cut(s) 246
BstMWI GCNNNNNNNGC 3 cut(s) 64, 325, 382
BstNI CCWGG 2 cut(s) 36, 158
BstSCI CCNGG 3 cut(s) 34, 156, 495
BstV1I GCAGC 2 cut(s) 17, 372
Bsu15I ATCGAT 1 cut(s) 230
BsuRI GGCC 6 cut(s) 12, 45, 71, 299, 356, 368
BsuTUI ATCGAT 1 cut(s) 230
BtgZI GCGATG 1 cut(s) 428
BtrI CACGTC 1 cut(s) 16
BtsCI GGATG 1 cut(s) 114
Cac8I GCNNGC 2 cut(s) 10, 69
CfoI GCGC 1 cut(s) 328
Cfr10I RCCGGY 2 cut(s) 8, 483
Cfr13I GGNCC 2 cut(s) 298, 486
ClaI ATCGAT 1 cut(s) 230
CpoI CGGWCCG 1 cut(s) 486
Csp6I GTAC 1 cut(s) 472
CspAI ACCGGT 1 cut(s) 483
CspI CGGWCCG 1 cut(s) 486
CviAII CATG 1 cut(s) 514
CviQI GTAC 1 cut(s) 472
DdeI CTNAG 2 cut(s) 208, 289
DpnI GATC 1 cut(s) 248
DpnII GATC 1 cut(s) 246
DriI GACNNNNNGTC 1 cut(s) 83
EaeI YGGCCR 4 cut(s) 10, 43, 69, 366
Eam1104I CTCTTC 1 cut(s) 86
Eam1105I GACNNNNNGTC 1 cut(s) 83
EarI CTCTTC 1 cut(s) 86
Ecl136II GAGCTC 1 cut(s) 376
Eco147I AGGCCT 1 cut(s) 356
Eco24I GRGCYC 1 cut(s) 378
Eco31I GGTCTC 1 cut(s) 167
Eco47I GGWCC 1 cut(s) 486
Eco53kI GAGCTC 1 cut(s) 376
EcoICRI GAGCTC 1 cut(s) 376
EcoO109I RGGNCCY 1 cut(s) 298
EcoRII CCWGG 2 cut(s) 34, 156
EcoT38I GRGCYC 1 cut(s) 378
FaeI CATG 1 cut(s) 517
FaiI YATR 2 cut(s) 179, 515
FaqI GGGAC 2 cut(s) 11, 203
FatI CATG 1 cut(s) 513
FblI GTMKAC 1 cut(s) 311
Fnu4HI GCNGC 3 cut(s) 6, 386, 508
FokI GGATG 1 cut(s) 101
FriOI GRGCYC 1 cut(s) 378
Fsp4HI GCNGC 3 cut(s) 6, 386, 508
FspBI CTAG 1 cut(s) 302
GlaI GCGC 1 cut(s) 327
GluI GCNGC 3 cut(s) 6, 386, 508
HaeII RGCGCY 1 cut(s) 329
HaeIII GGCC 6 cut(s) 12, 45, 71, 299, 356, 368
HapII CCGG 5 cut(s) 9, 170, 484, 489, 496
HhaI GCGC 1 cut(s) 328
Hin1I GRCGYC 1 cut(s) 216
Hin1II CATG 1 cut(s) 517
Hin6I GCGC 1 cut(s) 326
HinP1I GCGC 1 cut(s) 326
HincII GTYRAC 1 cut(s) 312
HindII GTYRAC 1 cut(s) 312
HindIII AAGCTT 2 cut(s) 162, 446
HinfI GANTC 7 cut(s) 78, 139, 227, 262, 287, 308, 313
HpaII CCGG 5 cut(s) 9, 170, 484, 489, 496
HphI GGTGA 4 cut(s) 52, 91, 97, 247
Hpy166II GTNNAC 2 cut(s) 88, 312
Hpy188III TCNNGA 1 cut(s) 350
Hpy8I GTNNAC 2 cut(s) 88, 312
Hpy99I CGWCG 3 cut(s) 20, 128, 218
HpyAV CCTTC 3 cut(s) 118, 199, 414
HpyCH4III ACNGT 1 cut(s) 103
HpyCH4IV ACGT 2 cut(s) 15, 216
HpyCH4V TGCA 1 cut(s) 145
HpyF10VI GCNNNNNNNGC 3 cut(s) 64, 325, 382
HpyF3I CTNAG 2 cut(s) 208, 289
HpySE526I ACGT 2 cut(s) 15, 216
Hsp92I GRCGYC 1 cut(s) 216
Hsp92II CATG 1 cut(s) 517
HspAI GCGC 1 cut(s) 326
KroI GCCGGC 1 cut(s) 8
KroNI GCCGGC 1 cut(s) 10
Kzo9I GATC 1 cut(s) 246
Lsp1109I GCAGC 2 cut(s) 17, 372
MaeI CTAG 1 cut(s) 302
MaeII ACGT 2 cut(s) 15, 216
MaeIII GTNAC 3 cut(s) 103, 267, 284
MalI GATC 1 cut(s) 248
MbiI CCGCTC 1 cut(s) 58
MboI GATC 1 cut(s) 246
MboII GAAGA 2 cut(s) 73, 103
MhlI GDGCHC 1 cut(s) 378
MlsI TGGCCA 3 cut(s) 45, 71, 368
MluCI AATT 1 cut(s) 379
MluNI TGGCCA 3 cut(s) 45, 71, 368
MlyI GAGTC 6 cut(s) 72, 133, 256, 281, 307, 317
MnlI CCTC 5 cut(s) 59, 193, 203, 207, 346
Mox20I TGGCCA 3 cut(s) 45, 71, 368
MroNI GCCGGC 1 cut(s) 8
MscI TGGCCA 3 cut(s) 45, 71, 368
MseI TTAA 1 cut(s) 294
Msp20I TGGCCA 3 cut(s) 45, 71, 368
MspI CCGG 5 cut(s) 9, 170, 484, 489, 496
MspR9I CCNGG 3 cut(s) 36, 158, 497
MvaI CCWGG 2 cut(s) 36, 158
MwoI GCNNNNNNNGC 3 cut(s) 64, 325, 382
NaeI GCCGGC 1 cut(s) 10
NciI CCSGG 1 cut(s) 497
NdeII GATC 1 cut(s) 246
NgoMIV GCCGGC 1 cut(s) 8
NlaIII CATG 1 cut(s) 517
NmeAIII GCCGAG 1 cut(s) 295
NmuCI GTSAC 3 cut(s) 103, 267, 284
PceI AGGCCT 1 cut(s) 356
PdiI GCCGGC 1 cut(s) 10
PfeI GAWTC 1 cut(s) 227
PflFI GACNNNGTC 2 cut(s) 215, 265
PflMI CCANNNNNTGG 1 cut(s) 41
PfoI TCCNGGA 1 cut(s) 156
PinAI ACCGGT 1 cut(s) 483
PkrI GCNGC 3 cut(s) 7, 387, 509
PleI GAGTC 6 cut(s) 72, 133, 256, 281, 307, 316
PpsI GAGTC 6 cut(s) 72, 133, 256, 281, 307, 316
Psp124BI GAGCTC 1 cut(s) 378
Psp6I CCWGG 2 cut(s) 34, 156
PspGI CCWGG 2 cut(s) 34, 156
PspPI GGNCC 2 cut(s) 298, 486
PsyI GACNNNGTC 2 cut(s) 215, 265
RsaI GTAC 1 cut(s) 473
RsaNI GTAC 1 cut(s) 472
Rsr2I CGGWCCG 1 cut(s) 486
RsrII CGGWCCG 1 cut(s) 486
SacI GAGCTC 1 cut(s) 378
SalI GTCGAC 1 cut(s) 310
SaqAI TTAA 1 cut(s) 294
SatI GCNGC 3 cut(s) 6, 386, 508
Sau3AI GATC 1 cut(s) 246
Sau96I GGNCC 2 cut(s) 298, 486
SchI GAGTC 6 cut(s) 72, 133, 256, 281, 307, 317
ScrFI CCNGG 3 cut(s) 36, 158, 497
SduI GDGCHC 1 cut(s) 378
SinI GGWCC 1 cut(s) 486
SmlI CTYRAG 1 cut(s) 350
SmoI CTYRAG 1 cut(s) 350
Sse9I AATT 1 cut(s) 379
SseBI AGGCCT 1 cut(s) 356
SsiI CCGC 4 cut(s) 56, 276, 305, 508
SspMI CTAG 1 cut(s) 302
SstI GAGCTC 1 cut(s) 378
StuI AGGCCT 1 cut(s) 356
StyD4I CCNGG 3 cut(s) 34, 156, 495
TaaI ACNGT 1 cut(s) 103
TaiI ACGT 2 cut(s) 18, 219
TaqI TCGA 2 cut(s) 230, 311
TaqII GACCGA 1 cut(s) 255
TasI AATT 1 cut(s) 379
TatI WGTACW 1 cut(s) 471
TauI GCSGC 1 cut(s) 510
TfiI GAWTC 1 cut(s) 227
Tru1I TTAA 1 cut(s) 294
Tru9I TTAA 1 cut(s) 294
TseFI GTSAC 3 cut(s) 103, 267, 284
TseI GCWGC 2 cut(s) 5, 385
Tsp45I GTSAC 3 cut(s) 103, 267, 284
TspDTI ATGAA 1 cut(s) 103
TspGWI ACGGA 1 cut(s) 272
Tth111I GACNNNGTC 2 cut(s) 215, 265
Van91I CCANNNNNTGG 1 cut(s) 41
VpaK11BI GGWCC 1 cut(s) 486
XmiI GTMKAC 1 cut(s) 311
XspI CTAG 1 cut(s) 302
ZraI GACGTC 1 cut(s) 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.