pycom03g16970

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0000558
Physical Location & Seq
Forward (+)
18122495 .. 18123219
725 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g16970.2

Sequence Viewer

Length: 447 bp
ATGAAGATCGATCCATTACTATGGCACTTAAAAACGTCAATGAGGGAAAATCAACTTGGCAAATCTAAGAATTTTGTGCTATTTGATGAATTTATTTTGTTTTGCCTAAATCTTACCCATGTACCTTCACCGCCTCCGACCGTCGTGGGCACAGATCGAAGCTCCAGTGACTGTGCGGATTTGGAGAATCGTCAGCTAGCGCTCAGTAAAGGCACCACCTGCTCTTCTTGGAATTACTCCGGCCAGAGATTAGCCACTGGCTCCGTCGAAGGAACTCCCGCCATTTTTAACTTGCGCGACCCTTGCTTGTTGTCCCCCTTTTCCTGCACCTCAAAATCCAAGGTCCCTCACTCCATTCTGCTTGAATTGATGATTTTCCTCCTTTACATATCAACAACAGCAACTGCTCCCCTTCTTCATCGCACATCAGCTGCTCCCCTTATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

149

Amino Acids

16.29

Weight (kDa)

8.33

Isoelectric Point (pI)

42.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64350
fragaria_vesca FvH4_5g04160 FvH4_5g04161 FvH4_5g04200 FvH4_5g04210 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211
malus_domestica MD06G1103300.v1.1 MD06G1103400.v1.1 MD06G1103500.v1.1 MD06G1103600.v1.1 MD06G1103700.v1.1 MD06G1116200.v1.1 MD14G1122800.v1.1 MD14G1133100.v1.1
prunus_persica Prupe.5G116100_v2.0.a1 Prupe.5G116300_v2.0.a1 Prupe.I001100_v2.0.a1
pyrus_communis pycom03g16970 pycom06g09790 pycom06g09810 pycom06g09830 pycom06g09840
rosa_chinensis RchiOBHm_Chr7g0195271 RchiOBHm_Chr7g0195281 RchiOBHm_Chr7g0195291 RchiOBHm_Chr7g0195301 RchiOBHm_Chr7g0195311 RchiOBHm_Chr7g0222791
rosa_laevigata RLG00000004129 RLG00000004130 RLG00000004133 RLG00000004134 RLG00000004135
rosa_multiflora Rmu_co8481937.1_g000001 Rmu_sc0002381.1_g000002 Rmu_sc0002381.1_g000003 Rmu_sc0002381.1_g000007 Rmu_sc0002881.1_g000005 Rmu_sc0007366.1_g000001 Rmu_sc0011789.1_g000001 Rmu_sc0039338.1_g000002 Rmu_sc0039339.1_g000002
rosa_roxburghii Rroxscaffold_3G00235780 Rroxscaffold_3G00260600 Rroxscaffold_3G00260620 Rroxscaffold_3G00260630
rosa_rugosa Rorug07G0022200 Rorug07G0022300 Rorug07G0022400 Rorug07G0022500 Rorug07G0022600 Rorug07G0216900
rosa_samantha Rh7AG149300 Rh7AG149400 Rh7AG149500 Rh7AG149600 Rh7AG149700 Rh7AG356800 Rh7BG150500 Rh7BG150600 Rh7BG150700 Rh7BG150800 Rh7BG150900 Rh7BG151200 Rh7BG350700 Rh7CG154100 Rh7CG154200 Rh7CG154300 Rh7CG154700 Rh7CG374200 Rh7DG150500 Rh7DG150600 Rh7DG150700 Rh7DG150800 Rh7DG150900
rosa_wichuraiana Rw7G012750 Rw7G012760 Rw7G012770 Rw7G012780 Rw7G030260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 227
Acc36I ACCTGC 1 cut(s) 227
AccB1I GGYRCC 1 cut(s) 212
AccII CGCG 1 cut(s) 297
AciI CCGC 3 cut(s) 131, 176, 279
AclWI GGATC 1 cut(s) 5
AcoI YGGCCR 1 cut(s) 241
AcsI RAATTY 2 cut(s) 70, 89
AfaI GTAC 1 cut(s) 123
AfeI AGCGCT 1 cut(s) 201
AgsI TTSAA 1 cut(s) 365
AjuI GAANNNNNNNTTGG 2 cut(s) 39, 71
AluBI AGCT 3 cut(s) 162, 196, 431
AluI AGCT 3 cut(s) 162, 196, 431
AlwI GGATC 1 cut(s) 5
AlwNI CAGNNNCTG 2 cut(s) 171, 404
Aor51HI AGCGCT 1 cut(s) 201
AoxI GGCC 1 cut(s) 241
ApeKI GCWGC 1 cut(s) 431
ApoI RAATTY 2 cut(s) 70, 89
AspLEI GCGC 2 cut(s) 202, 297
AspS9I GGNCC 1 cut(s) 343
AsuHPI GGTGA 1 cut(s) 120
AsuNHI GCTAGC 1 cut(s) 196
AvaII GGWCC 1 cut(s) 343
BaeGI GKGCMC 1 cut(s) 152
BaeI ACNNNNGTAYC 2 cut(s) 105, 138
BanI GGYRCC 1 cut(s) 212
BbvI GCAGC 1 cut(s) 418
BfaI CTAG 2 cut(s) 197, 445
BfoI RGCGCY 1 cut(s) 203
BfuAI ACCTGC 1 cut(s) 227
BisI GCNGC 1 cut(s) 432
BlsI GCNGC 1 cut(s) 433
Bme18I GGWCC 1 cut(s) 343
BmgT120I GGNCC 1 cut(s) 343
BmiI GGNNCC 3 cut(s) 214, 262, 345
BmtI GCTAGC 1 cut(s) 200
BpmI CTGGAG 1 cut(s) 148
Bsa29I ATCGAT 1 cut(s) 9
BsaJI CCNNGG 1 cut(s) 339
Bse1I ACTGG 2 cut(s) 165, 262
BseCI ATCGAT 1 cut(s) 9
BseDI CCNNGG 1 cut(s) 339
BseMII CTCAG 1 cut(s) 217
BseNI ACTGG 2 cut(s) 165, 262
BseSI GKGCMC 1 cut(s) 152
BseXI GCAGC 1 cut(s) 418
BsgI GTGCAG 1 cut(s) 310
Bsh1236I CGCG 1 cut(s) 297
Bsh1285I CGRYCG 1 cut(s) 141
BshFI GGCC 1 cut(s) 243
BshNI GGYRCC 1 cut(s) 212
BshVI ATCGAT 1 cut(s) 9
BsiEI CGRYCG 1 cut(s) 141
BsiSI CCGG 1 cut(s) 240
BslFI GGGAC 2 cut(s) 298, 329
BsmFI GGGAC 2 cut(s) 298, 329
BsnI GGCC 1 cut(s) 243
Bsp1286I GDGCHC 1 cut(s) 152
Bsp143I GATC 3 cut(s) 6, 10, 154
BspACI CCGC 3 cut(s) 131, 176, 279
BspANI GGCC 1 cut(s) 243
BspCNI CTCAG 1 cut(s) 216
BspDI ATCGAT 1 cut(s) 9
BspFNI CGCG 1 cut(s) 297
BspLI GGNNCC 3 cut(s) 214, 262, 345
BspMI ACCTGC 1 cut(s) 227
BspOI GCTAGC 1 cut(s) 200
BspPI GGATC 1 cut(s) 5
BspQI GCTCTTC 1 cut(s) 229
BspT107I GGYRCC 1 cut(s) 212
BsrI ACTGG 2 cut(s) 165, 262
BssECI CCNNGG 1 cut(s) 339
BssMI GATC 3 cut(s) 6, 10, 154
BssT1I CCWWGG 1 cut(s) 339
Bst4CI ACNGT 2 cut(s) 142, 173
Bst6I CTCTTC 1 cut(s) 229
BstAPI GCANNNNNTGC 1 cut(s) 219
BstC8I GCNNGC 1 cut(s) 198
BstDEI CTNAG 2 cut(s) 66, 203
BstFNI CGCG 1 cut(s) 297
BstH2I RGCGCY 1 cut(s) 203
BstHHI GCGC 2 cut(s) 202, 297
BstKTI GATC 3 cut(s) 9, 13, 157
BstMBI GATC 3 cut(s) 6, 10, 154
BstMCI CGRYCG 1 cut(s) 141
BstMWI GCNNNNNNNGC 2 cut(s) 219, 303
BstSLI GKGCMC 1 cut(s) 152
BstUI CGCG 1 cut(s) 297
BstV1I GCAGC 1 cut(s) 418
BstXI CCANNNNNNTGG 1 cut(s) 21
Bsu15I ATCGAT 1 cut(s) 9
BsuRI GGCC 1 cut(s) 243
BsuTUI ATCGAT 1 cut(s) 9
BtgZI GCGATG 1 cut(s) 404
BtsIMutI CAGTG 2 cut(s) 172, 255
BveI ACCTGC 1 cut(s) 227
Cac8I GCNNGC 1 cut(s) 198
CaiI CAGNNNCTG 2 cut(s) 171, 404
CfoI GCGC 2 cut(s) 202, 297
Cfr13I GGNCC 1 cut(s) 343
ClaI ATCGAT 1 cut(s) 9
Csp6I GTAC 1 cut(s) 122
CviAII CATG 1 cut(s) 119
CviJI RGCY 6 cut(s) 162, 196, 243, 254, 261, 431
CviKI_1 RGCY 6 cut(s) 162, 196, 243, 254, 261, 431
CviQI GTAC 1 cut(s) 122
DdeI CTNAG 2 cut(s) 66, 203
DpnI GATC 3 cut(s) 8, 12, 156
DpnII GATC 3 cut(s) 6, 10, 154
EaeI YGGCCR 1 cut(s) 241
Eam1104I CTCTTC 1 cut(s) 229
EarI CTCTTC 1 cut(s) 229
Eco130I CCWWGG 1 cut(s) 339
Eco47I GGWCC 1 cut(s) 343
Eco47III AGCGCT 1 cut(s) 201
EcoO109I RGGNCCY 1 cut(s) 343
EcoT14I CCWWGG 1 cut(s) 339
ErhI CCWWGG 1 cut(s) 339
FaeI CATG 1 cut(s) 122
FaiI YATR 3 cut(s) 22, 120, 389
FaqI GGGAC 2 cut(s) 298, 329
FatI CATG 1 cut(s) 118
FauI CCCGC 1 cut(s) 286
Fnu4HI GCNGC 1 cut(s) 432
Fsp4HI GCNGC 1 cut(s) 432
FspBI CTAG 2 cut(s) 197, 445
GlaI GCGC 2 cut(s) 201, 296
GluI GCNGC 1 cut(s) 432
GsuI CTGGAG 1 cut(s) 148
HaeII RGCGCY 1 cut(s) 203
HaeIII GGCC 1 cut(s) 243
HapII CCGG 1 cut(s) 240
HhaI GCGC 2 cut(s) 202, 297
Hin1II CATG 1 cut(s) 122
Hin6I GCGC 2 cut(s) 200, 295
HinP1I GCGC 2 cut(s) 200, 295
HinfI GANTC 1 cut(s) 187
HpaII CCGG 1 cut(s) 240
HphI GGTGA 1 cut(s) 120
Hpy188I TCNGA 1 cut(s) 138
Hpy99I CGWCG 2 cut(s) 146, 269
HpyAV CCTTC 3 cut(s) 135, 263, 422
HpyCH4III ACNGT 2 cut(s) 142, 173
HpyCH4IV ACGT 1 cut(s) 35
HpyCH4V TGCA 1 cut(s) 327
HpyF10VI GCNNNNNNNGC 2 cut(s) 219, 303
HpyF3I CTNAG 2 cut(s) 66, 203
HpySE526I ACGT 1 cut(s) 35
Hsp92II CATG 1 cut(s) 122
HspAI GCGC 2 cut(s) 200, 295
Kzo9I GATC 3 cut(s) 6, 10, 154
LguI GCTCTTC 1 cut(s) 229
LmnI GCTCC 4 cut(s) 167, 266, 412, 439
LpnPI CCDG 6 cut(s) 178, 232, 243, 253, 257, 337
Lsp1109I GCAGC 1 cut(s) 418
MaeI CTAG 2 cut(s) 197, 445
MaeII ACGT 1 cut(s) 35
MaeIII GTNAC 1 cut(s) 167
MalI GATC 3 cut(s) 8, 12, 156
MboI GATC 3 cut(s) 6, 10, 154
MboII GAAGA 3 cut(s) 16, 216, 407
MhlI GDGCHC 1 cut(s) 152
MluCI AATT 4 cut(s) 70, 89, 232, 365
MmeI TCCRAC 1 cut(s) 161
MnlI CCTC 5 cut(s) 36, 144, 340, 357, 389
MseI TTAA 2 cut(s) 29, 288
MslI CAYNNNNRTG 1 cut(s) 19
MspA1I CMGCKG 1 cut(s) 431
MspI CCGG 1 cut(s) 240
MvnI CGCG 1 cut(s) 297
MwoI GCNNNNNNNGC 2 cut(s) 219, 303
NdeII GATC 3 cut(s) 6, 10, 154
NheI GCTAGC 1 cut(s) 196
NlaIII CATG 1 cut(s) 122
NlaIV GGNNCC 3 cut(s) 214, 262, 345
NmuCI GTSAC 1 cut(s) 167
PaqCI CACCTGC 1 cut(s) 227
PciSI GCTCTTC 1 cut(s) 229
PfeI GAWTC 1 cut(s) 187
PkrI GCNGC 1 cut(s) 433
PpuMI RGGWCCY 1 cut(s) 343
Psp5II RGGWCCY 1 cut(s) 343
PspN4I GGNNCC 3 cut(s) 214, 262, 345
PspPI GGNCC 1 cut(s) 343
PspPPI RGGWCCY 1 cut(s) 343
PstNI CAGNNNCTG 2 cut(s) 171, 404
PvuII CAGCTG 1 cut(s) 431
RsaI GTAC 1 cut(s) 123
RsaNI GTAC 1 cut(s) 122
RseI CAYNNNNRTG 1 cut(s) 19
SapI GCTCTTC 1 cut(s) 229
SaqAI TTAA 2 cut(s) 29, 288
SatI GCNGC 1 cut(s) 432
Sau3AI GATC 3 cut(s) 6, 10, 154
Sau96I GGNCC 1 cut(s) 343
SduI GDGCHC 1 cut(s) 152
SetI ASST 8 cut(s) 38, 127, 164, 198, 221, 332, 345, 433
SinI GGWCC 1 cut(s) 343
SmiMI CAYNNNNRTG 1 cut(s) 19
Sse9I AATT 4 cut(s) 70, 89, 232, 365
SsiI CCGC 3 cut(s) 131, 176, 279
SspMI CTAG 2 cut(s) 197, 445
StyI CCWWGG 1 cut(s) 339
TaaI ACNGT 2 cut(s) 142, 173
TaiI ACGT 1 cut(s) 38
TaqI TCGA 3 cut(s) 9, 157, 267
TasI AATT 4 cut(s) 70, 89, 232, 365
TfiI GAWTC 1 cut(s) 187
Tru1I TTAA 2 cut(s) 29, 288
Tru9I TTAA 2 cut(s) 29, 288
TscAI CASTG 2 cut(s) 172, 262
TseFI GTSAC 1 cut(s) 167
TseI GCWGC 1 cut(s) 431
Tsp45I GTSAC 1 cut(s) 167
TspDTI ATGAA 3 cut(s) 17, 102, 407
TspGWI ACGGA 1 cut(s) 253
TspRI CASTG 2 cut(s) 172, 262
VpaK11BI GGWCC 1 cut(s) 343
XapI RAATTY 2 cut(s) 70, 89
XspI CTAG 2 cut(s) 197, 445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.