Rmu_sc0002881.1_g000005

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002881.1
OG0000558
Physical Location & Seq
Forward (+)
18327 .. 19540
1214 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002881.1_g000005.1.cds

Sequence Viewer

Length: 759 bp
atgctagaactatctgtacaccccgtggagttgaggtttaggccacctgataggctgatacccctgctcgagctggccaaacgactcgttgtccaccacaacttcactgtcaccttcctcatccccaacgaccgtacgaacctgacaccgcaaaagaaagtcctggaagctttgccggagagcatatcctccaccttcctccctccagtcaacttcgacgacctcccaccagaatcaaaggtggaaaccaagatcgctctcaccttggctcggtcactcttcgctgtccgcgactcagttaaggccctagcggaatcgactcgactggtggcgcttgttgttgatctctttggtcctcaggcctttgatgtggccattgagtttaatgtgctgccctaccttttcttccctacttcggcaatggatttgtggtttgtgtttgagttgccaaagcttgacgagactactacttgtgagtacagggatttgcctgaaccggtccagtatccgggttgtgtgccgttgcatggcagagacttagcagacccggttcaagataggagcaatgatgcttataaggcgctgatccgcatcagcaagaggtataagtcggctgctgggatcatggtgaatagctttgcggatttggaaccgggtgctttcaaggctttcaaggaccaaggaccaggtcttggtcttccaccggtttacccggtaggaccggttcggtggatgagttggttgagaatgagtgcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

252

Amino Acids

28.3

Weight (kDa)

5.85

Isoelectric Point (pI)

46.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64350
fragaria_vesca FvH4_5g04160 FvH4_5g04161 FvH4_5g04200 FvH4_5g04210 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211 FvH4_5g04211
malus_domestica MD06G1103300.v1.1 MD06G1103400.v1.1 MD06G1103500.v1.1 MD06G1103600.v1.1 MD06G1103700.v1.1 MD06G1116200.v1.1 MD14G1122800.v1.1 MD14G1133100.v1.1
prunus_persica Prupe.5G116100_v2.0.a1 Prupe.5G116300_v2.0.a1 Prupe.I001100_v2.0.a1
pyrus_communis pycom03g16970 pycom06g09790 pycom06g09810 pycom06g09830 pycom06g09840
rosa_chinensis RchiOBHm_Chr7g0195271 RchiOBHm_Chr7g0195281 RchiOBHm_Chr7g0195291 RchiOBHm_Chr7g0195301 RchiOBHm_Chr7g0195311 RchiOBHm_Chr7g0222791
rosa_laevigata RLG00000004129 RLG00000004130 RLG00000004133 RLG00000004134 RLG00000004135
rosa_multiflora Rmu_co8481937.1_g000001 Rmu_sc0002381.1_g000002 Rmu_sc0002381.1_g000003 Rmu_sc0002381.1_g000007 Rmu_sc0002881.1_g000005 Rmu_sc0007366.1_g000001 Rmu_sc0011789.1_g000001 Rmu_sc0039338.1_g000002 Rmu_sc0039339.1_g000002
rosa_roxburghii Rroxscaffold_3G00235780 Rroxscaffold_3G00260600 Rroxscaffold_3G00260620 Rroxscaffold_3G00260630
rosa_rugosa Rorug07G0022200 Rorug07G0022300 Rorug07G0022400 Rorug07G0022500 Rorug07G0022600 Rorug07G0216900
rosa_samantha Rh7AG149300 Rh7AG149400 Rh7AG149500 Rh7AG149600 Rh7AG149700 Rh7AG356800 Rh7BG150500 Rh7BG150600 Rh7BG150700 Rh7BG150800 Rh7BG150900 Rh7BG151200 Rh7BG350700 Rh7CG154100 Rh7CG154200 Rh7CG154300 Rh7CG154700 Rh7CG374200 Rh7DG150500 Rh7DG150600 Rh7DG150700 Rh7DG150800 Rh7DG150900
rosa_wichuraiana Rw7G012750 Rw7G012760 Rw7G012770 Rw7G012780 Rw7G030260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 576
AccB7I CCANNNNNTGG 1 cut(s) 692
AccII CGCG 1 cut(s) 291
AciI CCGC 5 cut(s) 149, 289, 311, 589, 641
AclWI GGATC 2 cut(s) 580, 629
AcoI YGGCCR 2 cut(s) 75, 372
AdeI CACNNNGTG 1 cut(s) 25
AfaI GTAC 3 cut(s) 18, 136, 479
AfiI CCNNNNNNNGG 5 cut(s) 270, 415, 508, 527, 692
AgeI ACCGGT 3 cut(s) 496, 703, 721
AgsI TTSAA 3 cut(s) 554, 664, 673
AhdI GACNNNNNGTC 1 cut(s) 89
AjnI CCWGG 2 cut(s) 162, 685
AluBI AGCT 4 cut(s) 73, 170, 454, 636
AluI AGCT 4 cut(s) 73, 170, 454, 636
Alw26I GTCTC 2 cut(s) 455, 528
AlwI GGATC 2 cut(s) 580, 629
Ama87I CYCGRG 1 cut(s) 68
AoxI GGCC 5 cut(s) 41, 75, 303, 360, 372
ApeKI GCWGC 2 cut(s) 391, 614
AsiGI ACCGGT 3 cut(s) 496, 703, 721
AspLEI GCGC 2 cut(s) 334, 583
AspS9I GGNCC 6 cut(s) 304, 353, 499, 676, 683, 719
AsuC2I CCSGG 4 cut(s) 510, 548, 654, 713
AsuHPI GGTGA 3 cut(s) 103, 253, 640
AvaI CYCGRG 1 cut(s) 68
AvaII GGWCC 5 cut(s) 353, 499, 676, 683, 719
AxyI CCTNAGG 1 cut(s) 357
BalI TGGCCA 2 cut(s) 77, 374
BbsI GAAGAC 1 cut(s) 689
BbvI GCAGC 2 cut(s) 378, 601
BceAI ACGGC 1 cut(s) 505
BciT130I CCWGG 2 cut(s) 164, 687
BciVI GTATCC 1 cut(s) 516
BcnI CCSGG 4 cut(s) 510, 548, 654, 713
BcoDI GTCTC 2 cut(s) 455, 528
BfaI CTAG 2 cut(s) 5, 308
BfoI RGCGCY 2 cut(s) 335, 584
BfuI GTATCC 1 cut(s) 516
BisI GCNGC 2 cut(s) 392, 615
BlsI GCNGC 2 cut(s) 393, 616
Bme1390I CCNGG 6 cut(s) 164, 510, 548, 654, 687, 713
Bme18I GGWCC 5 cut(s) 353, 499, 676, 683, 719
BmeRI GACNNNNNGTC 1 cut(s) 89
BmeT110I CYCGRG 1 cut(s) 68
BmgT120I GGNCC 6 cut(s) 304, 353, 499, 676, 683, 719
BmiI GGNNCC 1 cut(s) 651
BmrFI CCNGG 6 cut(s) 164, 510, 548, 654, 687, 713
BmsI GCATC 2 cut(s) 559, 600
BpiI GAAGAC 1 cut(s) 689
BpmI CTGGAG 1 cut(s) 189
BpuMI CCSGG 4 cut(s) 510, 548, 654, 713
BsaBI GATNNNNATC 1 cut(s) 590
BsaJI CCNNGG 3 cut(s) 24, 264, 679
BsaWI WCCGGW 3 cut(s) 496, 703, 721
BsaXI ACNNNNNCTCC 2 cut(s) 20, 50
Bsc4I CCNNNNNNNGG 5 cut(s) 270, 415, 508, 527, 692
Bse118I RCCGGY 3 cut(s) 496, 703, 721
Bse1I ACTGG 3 cut(s) 206, 330, 502
Bse21I CCTNAGG 1 cut(s) 357
Bse3DI GCAATG 2 cut(s) 426, 571
Bse8I GATNNNNATC 1 cut(s) 590
BseBI CCWGG 2 cut(s) 164, 687
BseDI CCNNGG 3 cut(s) 24, 264, 679
BseGI GGATG 2 cut(s) 120, 738
BseJI GATNNNNATC 1 cut(s) 590
BseLI CCNNNNNNNGG 5 cut(s) 270, 415, 508, 527, 692
BseMI GCAATG 2 cut(s) 426, 571
BseMII CTCAG 2 cut(s) 309, 371
BseNI ACTGG 3 cut(s) 206, 330, 502
BseXI GCAGC 2 cut(s) 378, 601
BseYI CCCAGC 1 cut(s) 617
Bsh1236I CGCG 1 cut(s) 291
Bsh1285I CGRYCG 1 cut(s) 133
BshFI GGCC 5 cut(s) 43, 77, 305, 362, 374
BshTI ACCGGT 3 cut(s) 496, 703, 721
BsiEI CGRYCG 1 cut(s) 133
BsiHKCI CYCGRG 1 cut(s) 68
BsiSI CCGG 8 cut(s) 176, 497, 509, 548, 653, 704, 713, 722
BsiWI CGTACG 1 cut(s) 134
BslI CCNNNNNNNGG 5 cut(s) 270, 415, 508, 527, 692
BsmAI GTCTC 2 cut(s) 455, 528
BsnI GGCC 5 cut(s) 43, 77, 305, 362, 374
BsoBI CYCGRG 1 cut(s) 68
Bsp1407I TGTACA 1 cut(s) 16
Bsp143I GATC 4 cut(s) 252, 343, 585, 621
BspACI CCGC 5 cut(s) 149, 289, 311, 589, 641
BspANI GGCC 5 cut(s) 43, 77, 305, 362, 374
BspCNI CTCAG 2 cut(s) 308, 370
BspFNI CGCG 1 cut(s) 291
BspLI GGNNCC 1 cut(s) 651
BspPI GGATC 2 cut(s) 580, 629
BsrDI GCAATG 2 cut(s) 426, 571
BsrFI RCCGGY 3 cut(s) 496, 703, 721
BsrGI TGTACA 1 cut(s) 16
BsrI ACTGG 3 cut(s) 206, 330, 502
BssAI RCCGGY 3 cut(s) 496, 703, 721
BssECI CCNNGG 3 cut(s) 24, 264, 679
BssMI GATC 4 cut(s) 252, 343, 585, 621
BssT1I CCWWGG 2 cut(s) 264, 679
Bst2UI CCWGG 2 cut(s) 164, 687
Bst4CI ACNGT 2 cut(s) 109, 134
Bst6I CTCTTC 1 cut(s) 284
BstAUI TGTACA 1 cut(s) 16
BstC8I GCNNGC 1 cut(s) 75
BstDEI CTNAG 3 cut(s) 295, 357, 538
BstDSI CCRYGG 1 cut(s) 24
BstF5I GGATG 2 cut(s) 120, 738
BstFNI CGCG 1 cut(s) 291
BstH2I RGCGCY 2 cut(s) 335, 584
BstHHI GCGC 2 cut(s) 334, 583
BstKTI GATC 4 cut(s) 255, 346, 588, 624
BstMAI GTCTC 2 cut(s) 455, 528
BstMBI GATC 4 cut(s) 252, 343, 585, 621
BstMCI CGRYCG 1 cut(s) 133
BstMWI GCNNNNNNNGC 2 cut(s) 578, 665
BstNI CCWGG 2 cut(s) 164, 687
BstSCI CCNGG 6 cut(s) 162, 508, 546, 652, 685, 711
BstUI CGCG 1 cut(s) 291
BstV1I GCAGC 2 cut(s) 378, 601
BstV2I GAAGAC 1 cut(s) 689
Bsu36I CCTNAGG 1 cut(s) 357
BsuI GTATCC 1 cut(s) 516
BsuRI GGCC 5 cut(s) 43, 77, 305, 362, 374
BtgI CCRYGG 1 cut(s) 24
BtsCI GGATG 2 cut(s) 120, 738
BtsIMutI CAGTG 1 cut(s) 105
Cac8I GCNNGC 1 cut(s) 75
CfoI GCGC 2 cut(s) 334, 583
Cfr10I RCCGGY 3 cut(s) 496, 703, 721
Cfr13I GGNCC 6 cut(s) 304, 353, 499, 676, 683, 719
CsiI ACCWGGT 1 cut(s) 685
Csp6I GTAC 3 cut(s) 17, 135, 478
CspAI ACCGGT 3 cut(s) 496, 703, 721
CviAII CATG 2 cut(s) 527, 625
CviQI GTAC 3 cut(s) 17, 135, 478
DdeI CTNAG 3 cut(s) 295, 357, 538
DpnI GATC 4 cut(s) 254, 345, 587, 623
DpnII GATC 4 cut(s) 252, 343, 585, 621
DraIII CACNNNGTG 1 cut(s) 25
DriI GACNNNNNGTC 1 cut(s) 89
EaeI YGGCCR 2 cut(s) 75, 372
Eam1104I CTCTTC 1 cut(s) 284
Eam1105I GACNNNNNGTC 1 cut(s) 89
EarI CTCTTC 1 cut(s) 284
Eco130I CCWWGG 2 cut(s) 264, 679
Eco147I AGGCCT 1 cut(s) 362
Eco47I GGWCC 5 cut(s) 353, 499, 676, 683, 719
Eco81I CCTNAGG 1 cut(s) 357
Eco88I CYCGRG 1 cut(s) 68
EcoO109I RGGNCCY 1 cut(s) 304
EcoRII CCWGG 2 cut(s) 162, 685
EcoT14I CCWWGG 2 cut(s) 264, 679
ErhI CCWWGG 2 cut(s) 264, 679
FaeI CATG 2 cut(s) 530, 628
FaiI YATR 5 cut(s) 185, 528, 576, 606, 626
FatI CATG 2 cut(s) 526, 624
Fnu4HI GCNGC 2 cut(s) 392, 615
FokI GGATG 2 cut(s) 107, 745
Fsp4HI GCNGC 2 cut(s) 392, 615
FspBI CTAG 2 cut(s) 5, 308
GlaI GCGC 2 cut(s) 333, 582
GluI GCNGC 2 cut(s) 392, 615
GsaI CCCAGC 1 cut(s) 621
GsuI CTGGAG 1 cut(s) 189
HaeII RGCGCY 2 cut(s) 335, 584
HaeIII GGCC 5 cut(s) 43, 77, 305, 362, 374
HapII CCGG 8 cut(s) 176, 497, 509, 548, 653, 704, 713, 722
HhaI GCGC 2 cut(s) 334, 583
Hin1II CATG 2 cut(s) 530, 628
Hin6I GCGC 2 cut(s) 332, 581
HinP1I GCGC 2 cut(s) 332, 581
HincII GTYRAC 1 cut(s) 211
HindII GTYRAC 1 cut(s) 211
HindIII AAGCTT 2 cut(s) 168, 452
HinfI GANTC 5 cut(s) 84, 233, 293, 314, 319
HpaII CCGG 8 cut(s) 176, 497, 509, 548, 653, 704, 713, 722
HphI GGTGA 3 cut(s) 103, 253, 640
Hpy166II GTNNAC 4 cut(s) 19, 94, 211, 709
Hpy188III TCNNGA 1 cut(s) 554
Hpy8I GTNNAC 4 cut(s) 19, 94, 211, 709
Hpy99I CGWCG 1 cut(s) 221
HpyAV CCTTC 2 cut(s) 124, 205
HpyCH4III ACNGT 2 cut(s) 109, 134
HpyCH4V TGCA 1 cut(s) 526
HpyF10VI GCNNNNNNNGC 2 cut(s) 578, 665
HpyF3I CTNAG 3 cut(s) 295, 357, 538
Hsp92II CATG 2 cut(s) 530, 628
HspAI GCGC 2 cut(s) 332, 581
Kzo9I GATC 4 cut(s) 252, 343, 585, 621
LmnI GCTCC 1 cut(s) 561
Lsp1109I GCAGC 2 cut(s) 378, 601
LweI GCATC 2 cut(s) 559, 600
MabI ACCWGGT 1 cut(s) 685
MaeI CTAG 2 cut(s) 5, 308
MaeIII GTNAC 2 cut(s) 109, 273
MalI GATC 4 cut(s) 254, 345, 587, 623
MboI GATC 4 cut(s) 252, 343, 585, 621
MboII GAAGA 3 cut(s) 271, 397, 689
MlsI TGGCCA 2 cut(s) 77, 374
MluNI TGGCCA 2 cut(s) 77, 374
MlyI GAGTC 3 cut(s) 78, 287, 313
MnlI CCTC 8 cut(s) 27, 128, 199, 209, 213, 233, 366, 594
Mox20I TGGCCA 2 cut(s) 77, 374
MscI TGGCCA 2 cut(s) 77, 374
MseI TTAA 2 cut(s) 300, 384
Msp20I TGGCCA 2 cut(s) 77, 374
MspI CCGG 8 cut(s) 176, 497, 509, 548, 653, 704, 713, 722
MspR9I CCNGG 6 cut(s) 164, 510, 548, 654, 687, 713
MvaI CCWGG 2 cut(s) 164, 687
MvnI CGCG 1 cut(s) 291
MwoI GCNNNNNNNGC 2 cut(s) 578, 665
NciI CCSGG 4 cut(s) 510, 548, 654, 713
NdeII GATC 4 cut(s) 252, 343, 585, 621
NlaIII CATG 2 cut(s) 530, 628
NlaIV GGNNCC 1 cut(s) 651
NmuCI GTSAC 2 cut(s) 109, 273
PaeR7I CTCGAG 1 cut(s) 68
PceI AGGCCT 1 cut(s) 362
PcsI WCGNNNNNNNCGW 1 cut(s) 288
PfeI GAWTC 2 cut(s) 233, 314
Pfl23II CGTACG 1 cut(s) 134
PflFI GACNNNGTC 1 cut(s) 687
PflMI CCANNNNNTGG 1 cut(s) 692
PfoI TCCNGGA 1 cut(s) 162
PinAI ACCGGT 3 cut(s) 496, 703, 721
PkrI GCNGC 2 cut(s) 393, 616
PleI GAGTC 3 cut(s) 78, 287, 313
PpsI GAGTC 3 cut(s) 78, 287, 313
PsiI TTATAA 1 cut(s) 576
Psp6I CCWGG 2 cut(s) 162, 685
PspFI CCCAGC 1 cut(s) 617
PspGI CCWGG 2 cut(s) 162, 685
PspLI CGTACG 1 cut(s) 134
PspN4I GGNNCC 1 cut(s) 651
PspPI GGNCC 6 cut(s) 304, 353, 499, 676, 683, 719
PspXI VCTCGAGB 1 cut(s) 68
PsrI GAACNNNNNNTAC 3 cut(s) 32, 708, 740
PsyI GACNNNGTC 1 cut(s) 687
RsaI GTAC 3 cut(s) 18, 136, 479
RsaNI GTAC 3 cut(s) 17, 135, 478
SaqAI TTAA 2 cut(s) 300, 384
SatI GCNGC 2 cut(s) 392, 615
Sau3AI GATC 4 cut(s) 252, 343, 585, 621
Sau96I GGNCC 6 cut(s) 304, 353, 499, 676, 683, 719
SchI GAGTC 3 cut(s) 78, 287, 313
ScrFI CCNGG 6 cut(s) 164, 510, 548, 654, 687, 713
SexAI ACCWGGT 1 cut(s) 685
SfaNI GCATC 2 cut(s) 559, 600
Sfr274I CTCGAG 1 cut(s) 68
SinI GGWCC 5 cut(s) 353, 499, 676, 683, 719
SlaI CTCGAG 1 cut(s) 68
SmlI CTYRAG 1 cut(s) 68
SmoI CTYRAG 1 cut(s) 68
SseBI AGGCCT 1 cut(s) 362
SsiI CCGC 5 cut(s) 149, 289, 311, 589, 641
SspMI CTAG 2 cut(s) 5, 308
StuI AGGCCT 1 cut(s) 362
StyD4I CCNGG 6 cut(s) 162, 508, 546, 652, 685, 711
StyI CCWWGG 2 cut(s) 264, 679
TaaI ACNGT 2 cut(s) 109, 134
TaqI TCGA 4 cut(s) 69, 216, 317, 322
TaqII GACCGA 1 cut(s) 261
TatI WGTACW 2 cut(s) 16, 477
TfiI GAWTC 2 cut(s) 233, 314
Tru1I TTAA 2 cut(s) 300, 384
Tru9I TTAA 2 cut(s) 300, 384
TscAI CASTG 1 cut(s) 112
TseFI GTSAC 2 cut(s) 109, 273
TseI GCWGC 2 cut(s) 391, 614
Tsp45I GTSAC 2 cut(s) 109, 273
TspRI CASTG 1 cut(s) 112
Tth111I GACNNNGTC 1 cut(s) 687
Van91I CCANNNNNTGG 1 cut(s) 692
VpaK11BI GGWCC 5 cut(s) 353, 499, 676, 683, 719
XhoI CTCGAG 1 cut(s) 68
XspI CTAG 2 cut(s) 5, 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.