Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0001241

Physical Location & Seq

Genomic Coordinates Forward (+)

25037756 .. 25041684

Gene Structure 3929 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1172800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGGGATTTGTGAGCAGTTTATTGGGAATTCTTGGTTTTGGAATCGGAATTTCTCTTGGACTCTTGGTGGGGTTTTTCCTTTTTGTTTATTCAAAGCCCGAAGAAGTTGAGGATCCAGTTTGCAGACCACTTTATGATTTAGATGAATTTGCCTTGCAAGATCTTCTTCCTGAAATTCCACTGTGGGTAGACTGGTTGAATAAATTTATTGCAGATTTATGGCCTTACCTTGAGAAGGAAATTGCGGGAACAATAAGAAGCGTTGCTCAACCTATATTTGATGAGTACATTGGGAAGTTTCAGATTGAGTCAATTGACTTTGAGAGAATAGATATGGGAACTCTTCCTCCTATTCTTAACGGTCTTGAAGTCTTCGAGACGAACGATAATGAATTAATCATGGAACCATCAATTAAATGGGCAGGAAATCCCAACATAATTCTGGTGTTAAAAGTTCTGTCTCTACGAATTACAGTTCAGTTAATAGATATACAAGTATTTTTGGCGCCAAGAATAGCTTTCAAACCGCTCGTGCCTTCCTTTCCGTGCTTTGCTAACATTGTGGTGTCTTTGATGGAGAAGCCTCATGTAGATTTTGGAATGAAAATATTGGGAGCCGATATCATGTCCATACCCGGCCTCTATCGTTTTGTTCAGGAGACTATTAAAAAGCAAGTTGCAAGCCTCTACCTCTGGCCTCGGACTCTTGAAATACCTATCCTTGATGTTTCAACAGTGGCTGTAAAGAAGCCGGTCGGAATACTACACGTGAATGTTGTTCACGCGGTTAAACTCTTGAAGAAGGATATCATAGGATCATCCGATCCTTATGTCAAGCTCAGCCTGACTGGAGATGGGTTGCCAGCAAAGAAAACAACTATCAAGAAGAAAAACCTGAACCCCGAGTGGAACGAGAAGTTCAAGCTTCTTGTGAAGGATCCCAAGACCCAACTTCTTCGGTTACAAGTCTTTGACTGGGACAAGGTTGGTGGGCATGATAGGATAGGAATGCAGTTAGTTCCTCTCAAGCAACTTACACCCCATGTGTTGCAAGAGTTTAAACTTGATTTGCTCAAGGACACGAATATTAGCAATTGTACAAACAAGAAGCAAAGAGGGCAGCTTGTGGTGGAACTAACTTTTGTGCCTTTCAAAGAAGACATAAGCAGGTTTAGTGGTGGATTTAGCGGACCTATTGATTCAGCACATAGGAGAAACGAAAGCGGAATCGACATGTCAATGTCATCAGATGAGGGAACCCTAGGTGGAGCAGGTTTACTATCGGTTATTATTCAAGGAGCCGAGAATGTGGAAGGGAAGTCCCACAACAATCCTTATGCCATCCTCCTATTTAGAGGAGAACAGAAGAAAACACATATGCTTCGGAAAACTCGTGATCCCCGATGGAGCAAGGAATTCCCTTTCATGCTAGATGAGCCACCTTTGAGTGAGAAAGTTCATATTGAGGTTGTGAGTAAGAGGACCGGCATTAGTTTCCGTAGGAAGGAATCTTTGGGATATGTAGAAATCAATCTACGAGACGTTGTGCACAACGGTCGGATCAACCAGAAATACCACTTAATCAATTCAAAGAATGGAGTGATACAGGTTGAGATTAGCTGGAAGATCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005515 GO:0005543 GO:0005544 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0008289 GO:0008429 GO:0009898 GO:0012505 GO:0016020 GO:0016021 GO:0019897 GO:0019898 GO:0031210 GO:0031224 GO:0031226 GO:0031227 GO:0031234 GO:0031984 GO:0035091 GO:0042175 GO:0042802 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044232 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046872 GO:0050997 GO:0070405 GO:0071944 GO:0098552 GO:0098562 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 SMP_LBD

Protein Analysis

545

Amino Acids

61.49

Weight (kDa)

8.16

Isoelectric Point (pI)

37.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMP_LBD	PF17047	64 - 239	6.7e-14	Synaptotagmin-like mitochondrial-lipid-binding domain
SMP_MUG190-like	PF25669	157 - 239	1.2e-06	MUG190-like SMP domain
C2	PF00168	253 - 350	5.8e-26	C2 domain
C2	PF00168	426 - 527	4.1e-12	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001241)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04220 AT5G04220 AT5G04220
fragaria_vesca	FvH4_6g16032 FvH4_7g19170 FvH4_7g19170 FvH4_7g19180 FvH4_7g19180 FvH4_7g19180
malus_domestica	MD01G1107100.v1.1 MD01G1107200.v1.1 MD07G1172800.v1.1 MD07G1173000.v1.1 MD12G1117500.v1.1
prunus_persica	Prupe.2G211900_v2.0.a1 Prupe.2G212000_v2.0.a1 Prupe.2G212000_v2.0.a1 Prupe.6G235800_v2.0.a1 Prupe.6G235800_v2.0.a1 Prupe.6G235800_v2.0.a1
pyrus_communis	pycom01g13380 pycom01g13390 pycom01g13400 pycom07g16760 pycom12g11620
rosa_chinensis	RchiOBHm_Chr1g0363021 RchiOBHm_Chr1g0363031 RchiOBHm_Chr3g0469781
rosa_laevigata	RLG00000015212 RLG00000024321 RLG00000027600 RLG00000027601
rosa_multiflora	Rmu_co8490065.1_g000001 Rmu_sc0004472.1_g000002 Rmu_sc0004472.1_g000003 Rmu_sc0024252.1_g000005 Rmu_sc0036506.1_g000001
rosa_roxburghii	Rroxscaffold_4G00293530 Rroxscaffold_6G00411490
rosa_rugosa	Rorug01G0303600 Rorug01G0303700 Rorug01G0303800 Rorug01G0303900 Rorug03G0104400
rosa_samantha	Rh1AG312800 Rh1AG312900 Rh1CG292800 Rh1CG292900 Rh3AG153500 Rh3BG177600 Rh3CG168400 Rh3DG197900 Rh3DG198000
rosa_wichuraiana	Rw1G027710 Rw1G027720 Rw3G014470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1158, 1262
AccB1I	GGYRCC	1 cut(s)	505
AccBSI	CCGCTC	1 cut(s)	529
AccI	GTMKAC	1 cut(s)	189
AccII	CGCG	1 cut(s)	785
AciI	CCGC	5 cut(s)	245, 527, 785, 1188, 1224
AclWI	GGATC	8 cut(s)	107, 120, 818, 823, 932, 945, 1391, 1568
AcsI	RAATTY	6 cut(s)	27, 48, 146, 174, 203, 1415
AcvI	CACGTG	1 cut(s)	769
AcyI	GRCGYC	1 cut(s)	506
AfaI	GTAC	2 cut(s)	287, 1099
AfiI	CCNNNNNNNGG	2 cut(s)	235, 1504
AflIII	ACRYGT	2 cut(s)	766, 1233
AjuI	GAANNNNNNNTTGG	2 cut(s)	1496, 1528
AloI	GAACNNNNNNTCC	2 cut(s)	331, 363
AluBI	AGCT	5 cut(s)	518, 838, 925, 1123, 1620
AluI	AGCT	5 cut(s)	518, 838, 925, 1123, 1620
Alw21I	GWGCWC	1 cut(s)	1551
Alw26I	GTCTC	4 cut(s)	371, 465, 653, 1533
Alw44I	GTGCAC	1 cut(s)	1547
AlwI	GGATC	8 cut(s)	107, 120, 818, 823, 932, 945, 1391, 1568
AlwNI	CAGNNNCTG	1 cut(s)	740
Ama87I	CYCGRG	1 cut(s)	902
AoxI	GGCC	3 cut(s)	221, 637, 695
ApaLI	GTGCAC	1 cut(s)	1547
ApeKI	GCWGC	1 cut(s)	1120
ApoI	RAATTY	6 cut(s)	27, 48, 146, 174, 203, 1415
AseI	ATTAAT	1 cut(s)	395
AspA2I	CCTAGG	1 cut(s)	1261
AspLEI	GCGC	1 cut(s)	508
AspS9I	GGNCC	2 cut(s)	1190, 1482
AsuC2I	CCSGG	1 cut(s)	636
AvaI	CYCGRG	1 cut(s)	902
AvaII	GGWCC	2 cut(s)	1190, 1482
AvrII	CCTAGG	1 cut(s)	1261
BaeGI	GKGCMC	1 cut(s)	1551
BamHI	GGATCC	2 cut(s)	112, 937
BanI	GGYRCC	1 cut(s)	505
BauI	CACGAG	2 cut(s)	530, 1392
BbrPI	CACGTG	1 cut(s)	769
BbsI	GAAGAC	2 cut(s)	364, 1164
Bbv12I	GWGCWC	1 cut(s)	1551
BbvI	GCAGC	1 cut(s)	1132
BccI	CCATC	5 cut(s)	415, 568, 848, 1349, 1398
BcgI	CGANNNNNNTGC	2 cut(s)	1538, 1572
BcnI	CCSGG	1 cut(s)	636
BcoDI	GTCTC	4 cut(s)	371, 465, 653, 1533
BfaI	CTAG	2 cut(s)	1262, 1430
BfoI	RGCGCY	1 cut(s)	509
BfuAI	ACCTGC	2 cut(s)	1158, 1262
BglII	AGATCT	1 cut(s)	160
BisI	GCNGC	1 cut(s)	1121
BlnI	CCTAGG	1 cut(s)	1261
BlpI	GCTNAGC	1 cut(s)	839
BlsI	GCNGC	1 cut(s)	1122
Bme1390I	CCNGG	1 cut(s)	636
Bme18I	GGWCC	2 cut(s)	1190, 1482
BmeT110I	CYCGRG	1 cut(s)	902
BmgT120I	GGNCC	2 cut(s)	1190, 1482
BmiI	GGNNCC	7 cut(s)	114, 405, 507, 616, 939, 1258, 1300
BmrFI	CCNGG	1 cut(s)	636
BmrI	ACTGGG	1 cut(s)	985
BmuI	ACTGGG	1 cut(s)	985
BpiI	GAAGAC	2 cut(s)	364, 1164
BpmI	CTGGAG	1 cut(s)	870
Bpu1102I	GCTNAGC	1 cut(s)	839
BpuEI	CTTGAG	3 cut(s)	251, 1010, 1058
BpuMI	CCSGG	1 cut(s)	636
BsaAI	YACGTR	1 cut(s)	769
BsaHI	GRCGYC	1 cut(s)	506
BsaJI	CCNNGG	2 cut(s)	698, 1261
BsaXI	ACNNNNNCTCC	2 cut(s)	331, 361
Bsc4I	CCNNNNNNNGG	2 cut(s)	235, 1504
Bse118I	RCCGGY	2 cut(s)	751, 1484
Bse1I	ACTGG	4 cut(s)	116, 197, 853, 980
BseDI	CCNNGG	2 cut(s)	698, 1261
BseGI	GGATG	2 cut(s)	818, 1341
BseLI	CCNNNNNNNGG	2 cut(s)	235, 1504
BseMII	CTCAG	1 cut(s)	853
BseNI	ACTGG	4 cut(s)	116, 197, 853, 980
BseRI	GAGGAG	1 cut(s)	1371
BseSI	GKGCMC	1 cut(s)	1551
BseXI	GCAGC	1 cut(s)	1132
Bsh1236I	CGCG	1 cut(s)	785
Bsh1285I	CGRYCG	2 cut(s)	756, 1558
BshFI	GGCC	3 cut(s)	223, 639, 697
BshNI	GGYRCC	1 cut(s)	505
BsiEI	CGRYCG	2 cut(s)	756, 1558
BsiHKAI	GWGCWC	1 cut(s)	1551
BsiHKCI	CYCGRG	1 cut(s)	902
BsiSI	CCGG	3 cut(s)	636, 752, 1485
BslFI	GGGAC	2 cut(s)	992, 1306
BslI	CCNNNNNNNGG	2 cut(s)	235, 1504
BsmAI	GTCTC	4 cut(s)	371, 465, 653, 1533
BsmBI	CGTCTC	2 cut(s)	371, 1533
BsmFI	GGGAC	2 cut(s)	992, 1306
BsmI	GAATGC	1 cut(s)	1014
BsnI	GGCC	3 cut(s)	223, 639, 697
BsoBI	CYCGRG	1 cut(s)	902
Bsp1286I	GDGCHC	1 cut(s)	1551
Bsp1407I	TGTACA	1 cut(s)	1097
Bsp143I	GATC	8 cut(s)	112, 160, 815, 823, 937, 1396, 1560, 1626
Bsp1720I	GCTNAGC	1 cut(s)	839
BspACI	CCGC	5 cut(s)	245, 527, 785, 1188, 1224
BspANI	GGCC	3 cut(s)	223, 639, 697
BspCNI	CTCAG	1 cut(s)	852
BspFNI	CGCG	1 cut(s)	785
BspLI	GGNNCC	7 cut(s)	114, 405, 507, 616, 939, 1258, 1300
BspMI	ACCTGC	2 cut(s)	1158, 1262
BspPI	GGATC	8 cut(s)	107, 120, 818, 823, 932, 945, 1391, 1568
BspT107I	GGYRCC	1 cut(s)	505
BsrBI	CCGCTC	1 cut(s)	529
BsrFI	RCCGGY	2 cut(s)	751, 1484
BsrGI	TGTACA	1 cut(s)	1097
BsrI	ACTGG	4 cut(s)	116, 197, 853, 980
BssAI	RCCGGY	2 cut(s)	751, 1484
BssECI	CCNNGG	2 cut(s)	698, 1261
BssMI	GATC	8 cut(s)	112, 160, 815, 823, 937, 1396, 1560, 1626
BssNI	GRCGYC	1 cut(s)	506
BssSI	CACGAG	2 cut(s)	530, 1392
BssT1I	CCWWGG	1 cut(s)	1261
Bst2BI	CACGAG	2 cut(s)	530, 1392
Bst4CI	ACNGT	5 cut(s)	183, 362, 475, 736, 1556
Bst6I	CTCTTC	1 cut(s)	348
BstACI	GRCGYC	1 cut(s)	506
BstAUI	TGTACA	1 cut(s)	1097
BstBAI	YACGTR	1 cut(s)	769
BstC8I	GCNNGC	2 cut(s)	682, 864
BstDEI	CTNAG	1 cut(s)	839
BstENI	CCTNNNNNAGG	1 cut(s)	233
BstF5I	GGATG	2 cut(s)	818, 1341
BstFNI	CGCG	1 cut(s)	785
BstH2I	RGCGCY	1 cut(s)	509
BstHHI	GCGC	1 cut(s)	508
BstKTI	GATC	8 cut(s)	115, 163, 818, 826, 940, 1399, 1563, 1629
BstMAI	GTCTC	4 cut(s)	371, 465, 653, 1533
BstMBI	GATC	8 cut(s)	112, 160, 815, 823, 937, 1396, 1560, 1626
BstMCI	CGRYCG	2 cut(s)	756, 1558
BstMWI	GCNNNNNNNGC	2 cut(s)	1117, 1435
BstNSI	RCATGY	1 cut(s)	1237
BstSCI	CCNGG	1 cut(s)	634
BstSLI	GKGCMC	1 cut(s)	1551
BstUI	CGCG	1 cut(s)	785
BstV1I	GCAGC	1 cut(s)	1132
BstV2I	GAAGAC	2 cut(s)	364, 1164
BstX2I	RGATCY	3 cut(s)	112, 160, 937
BstYI	RGATCY	3 cut(s)	112, 160, 937
BsuRI	GGCC	3 cut(s)	223, 639, 697
BtsCI	GGATG	2 cut(s)	818, 1341
BtsIMutI	CAGTG	2 cut(s)	179, 741
BveI	ACCTGC	2 cut(s)	1158, 1262
Cac8I	GCNNGC	2 cut(s)	682, 864
CaiI	CAGNNNCTG	1 cut(s)	740
CfoI	GCGC	1 cut(s)	508
Cfr10I	RCCGGY	2 cut(s)	751, 1484
Cfr13I	GGNCC	2 cut(s)	1190, 1482
Csp6I	GTAC	2 cut(s)	286, 1098
CspCI	CAANNNNNGTGG	2 cut(s)	970, 1005
CviAII	CATG	7 cut(s)	400, 587, 625, 995, 1043, 1234, 1426
CviQI	GTAC	2 cut(s)	286, 1098
DdeI	CTNAG	1 cut(s)	839
DinI	GGCGCC	1 cut(s)	507
DpnI	GATC	8 cut(s)	114, 162, 817, 825, 939, 1398, 1562, 1628
DpnII	GATC	8 cut(s)	112, 160, 815, 823, 937, 1396, 1560, 1626
DraI	TTTAAA	1 cut(s)	1060
Eam1104I	CTCTTC	1 cut(s)	348
EarI	CTCTTC	1 cut(s)	348
Eco130I	CCWWGG	1 cut(s)	1261
Eco32I	GATATC	2 cut(s)	622, 808
Eco47I	GGWCC	2 cut(s)	1190, 1482
Eco72I	CACGTG	1 cut(s)	769
Eco88I	CYCGRG	1 cut(s)	902
EcoNI	CCTNNNNNAGG	1 cut(s)	233
EcoRI	GAATTC	2 cut(s)	27, 1415
EcoRV	GATATC	2 cut(s)	622, 808
EcoT14I	CCWWGG	1 cut(s)	1261
EgeI	GGCGCC	1 cut(s)	507
EheI	GGCGCC	1 cut(s)	507
ErhI	CCWWGG	1 cut(s)	1261
Esp3I	CGTCTC	2 cut(s)	371, 1533
FaeI	CATG	7 cut(s)	403, 590, 628, 998, 1046, 1237, 1429
FalI	AAGNNNNNCTT	4 cut(s)	150, 182, 502, 534
FaqI	GGGAC	2 cut(s)	992, 1306
FatI	CATG	7 cut(s)	399, 586, 624, 994, 1042, 1233, 1425
FauI	CCCGC	1 cut(s)	238
FauNDI	CATATG	1 cut(s)	1377
FblI	GTMKAC	1 cut(s)	189
Fnu4HI	GCNGC	1 cut(s)	1121
FokI	GGATG	2 cut(s)	805, 1328
Fsp4HI	GCNGC	1 cut(s)	1121
FspBI	CTAG	2 cut(s)	1262, 1430
GlaI	GCGC	1 cut(s)	507
GluI	GCNGC	1 cut(s)	1121
GsuI	CTGGAG	1 cut(s)	870
HaeII	RGCGCY	1 cut(s)	509
HaeIII	GGCC	3 cut(s)	223, 639, 697
HapII	CCGG	3 cut(s)	636, 752, 1485
HhaI	GCGC	1 cut(s)	508
Hin1I	GRCGYC	1 cut(s)	506
Hin1II	CATG	7 cut(s)	403, 590, 628, 998, 1046, 1237, 1429
Hin6I	GCGC	1 cut(s)	506
HinP1I	GCGC	1 cut(s)	506
HindIII	AAGCTT	1 cut(s)	923
HinfI	GANTC	7 cut(s)	42, 60, 308, 703, 1199, 1227, 1508
HpaII	CCGG	3 cut(s)	636, 752, 1485
Hpy166II	GTNNAC	4 cut(s)	190, 781, 1277, 1549
Hpy188I	TCNGA	8 cut(s)	47, 303, 702, 758, 823, 1249, 1386, 1560
Hpy188III	TCNNGA	8 cut(s)	170, 365, 376, 656, 707, 796, 883, 1394
Hpy8I	GTNNAC	4 cut(s)	190, 781, 1277, 1549
HpyAV	CCTTC	6 cut(s)	229, 546, 796, 928, 1307, 1498
HpyCH4III	ACNGT	5 cut(s)	183, 362, 475, 736, 1556
HpyCH4IV	ACGT	2 cut(s)	768, 1542
HpyCH4V	TGCA	7 cut(s)	123, 157, 212, 680, 1012, 1051, 1549
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1117, 1435
HpyF3I	CTNAG	1 cut(s)	839
HpySE526I	ACGT	2 cut(s)	768, 1542
Hsp92I	GRCGYC	1 cut(s)	506
Hsp92II	CATG	7 cut(s)	403, 590, 628, 998, 1046, 1237, 1429
HspAI	GCGC	1 cut(s)	506
KasI	GGCGCC	1 cut(s)	505
Kzo9I	GATC	8 cut(s)	112, 160, 815, 823, 937, 1396, 1560, 1626
LmnI	GCTCC	4 cut(s)	614, 1268, 1298, 1407
Lsp1109I	GCAGC	1 cut(s)	1132
MaeI	CTAG	2 cut(s)	1262, 1430
MaeII	ACGT	2 cut(s)	768, 1542
MaeIII	GTNAC	1 cut(s)	960
MalI	GATC	8 cut(s)	114, 162, 817, 825, 939, 1398, 1562, 1628
MbiI	CCGCTC	1 cut(s)	529
MboI	GATC	8 cut(s)	112, 160, 815, 823, 937, 1396, 1560, 1626
MfeI	CAATTG	2 cut(s)	312, 1093
MflI	RGATCY	3 cut(s)	112, 160, 937
MhlI	GDGCHC	1 cut(s)	1551
Mly113I	GGCGCC	1 cut(s)	506
MlyI	GAGTC	3 cut(s)	54, 317, 697
MmeI	TCCRAC	2 cut(s)	736, 1538
MseI	TTAA	9 cut(s)	357, 395, 414, 449, 482, 666, 789, 1059, 1580
MslI	CAYNNNNRTG	3 cut(s)	563, 771, 1238
MspI	CCGG	3 cut(s)	636, 752, 1485
MspR9I	CCNGG	1 cut(s)	636
MssI	GTTTAAAC	1 cut(s)	1060
MunI	CAATTG	2 cut(s)	312, 1093
Mva1269I	GAATGC	1 cut(s)	1014
MvnI	CGCG	1 cut(s)	785
MwoI	GCNNNNNNNGC	2 cut(s)	1117, 1435
NarI	GGCGCC	1 cut(s)	506
NciI	CCSGG	1 cut(s)	636
NdeI	CATATG	1 cut(s)	1377
NdeII	GATC	8 cut(s)	112, 160, 815, 823, 937, 1396, 1560, 1626
NlaIII	CATG	7 cut(s)	403, 590, 628, 998, 1046, 1237, 1429
NlaIV	GGNNCC	7 cut(s)	114, 405, 507, 616, 939, 1258, 1300
NmeAIII	GCCGAG	1 cut(s)	1327
NspI	RCATGY	1 cut(s)	1237
PciI	ACATGT	1 cut(s)	1233
PcsI	WCGNNNNNNNCGW	3 cut(s)	381, 1390, 1399
PctI	GAATGC	1 cut(s)	1014
PfeI	GAWTC	4 cut(s)	42, 1199, 1227, 1508
PkrI	GCNGC	1 cut(s)	1122
PleI	GAGTC	3 cut(s)	54, 316, 697
PluTI	GGCGCC	1 cut(s)	509
PmaCI	CACGTG	1 cut(s)	769
PmeI	GTTTAAAC	1 cut(s)	1060
PmlI	CACGTG	1 cut(s)	769
PpsI	GAGTC	3 cut(s)	54, 316, 697
Ppu21I	YACGTR	1 cut(s)	769
PscI	ACATGT	1 cut(s)	1233
PshBI	ATTAAT	1 cut(s)	395
PspCI	CACGTG	1 cut(s)	769
PspN4I	GGNNCC	7 cut(s)	114, 405, 507, 616, 939, 1258, 1300
PspPI	GGNCC	2 cut(s)	1190, 1482
PstNI	CAGNNNCTG	1 cut(s)	740
PsuI	RGATCY	3 cut(s)	112, 160, 937
RsaI	GTAC	2 cut(s)	287, 1099
RsaNI	GTAC	2 cut(s)	286, 1098
RseI	CAYNNNNRTG	3 cut(s)	563, 771, 1238
SaqAI	TTAA	9 cut(s)	357, 395, 414, 449, 482, 666, 789, 1059, 1580
SatI	GCNGC	1 cut(s)	1121
Sau3AI	GATC	8 cut(s)	112, 160, 815, 823, 937, 1396, 1560, 1626
Sau96I	GGNCC	2 cut(s)	1190, 1482
SchI	GAGTC	3 cut(s)	54, 317, 697
ScrFI	CCNGG	1 cut(s)	636
SduI	GDGCHC	1 cut(s)	1551
SfoI	GGCGCC	1 cut(s)	507
SinI	GGWCC	2 cut(s)	1190, 1482
SmiMI	CAYNNNNRTG	3 cut(s)	563, 771, 1238
SmlI	CTYRAG	3 cut(s)	230, 1025, 1073
SmoI	CTYRAG	3 cut(s)	230, 1025, 1073
SsiI	CCGC	5 cut(s)	245, 527, 785, 1188, 1224
SspDI	GGCGCC	1 cut(s)	505
SspI	AATATT	2 cut(s)	609, 1087
SspMI	CTAG	2 cut(s)	1262, 1430
StyD4I	CCNGG	1 cut(s)	634
StyI	CCWWGG	1 cut(s)	1261
TaaI	ACNGT	5 cut(s)	183, 362, 475, 736, 1556
TaiI	ACGT	2 cut(s)	771, 1545
TaqI	TCGA	2 cut(s)	375, 1230
TatI	WGTACW	2 cut(s)	285, 1097
TfiI	GAWTC	4 cut(s)	42, 1199, 1227, 1508
Tru1I	TTAA	9 cut(s)	357, 395, 414, 449, 482, 666, 789, 1059, 1580
Tru9I	TTAA	9 cut(s)	357, 395, 414, 449, 482, 666, 789, 1059, 1580
TscAI	CASTG	2 cut(s)	186, 741
TseI	GCWGC	1 cut(s)	1120
TspDTI	ATGAA	5 cut(s)	159, 405, 617, 1414, 1448
TspGWI	ACGGA	2 cut(s)	534, 1487
TspRI	CASTG	2 cut(s)	186, 741
VneI	GTGCAC	1 cut(s)	1547
VpaK11BI	GGWCC	2 cut(s)	1190, 1482
VspI	ATTAAT	1 cut(s)	395
XagI	CCTNNNNNAGG	1 cut(s)	233
XapI	RAATTY	6 cut(s)	27, 48, 146, 174, 203, 1415
XceI	RCATGY	1 cut(s)	1237
XcmI	CCANNNNNNNNNTGG	2 cut(s)	414, 439
XmaJI	CCTAGG	1 cut(s)	1261
XmiI	GTMKAC	1 cut(s)	189
XspI	CTAG	2 cut(s)	1262, 1430

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.