MD08G1016900.v1.1

Galactose oxidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0000556
Physical Location & Seq
Reverse (-)
1293608 .. 1295218
1611 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1016900.v1.1.491

Sequence Viewer

Length: 1611 bp
ATGAAGACAATTAGTCTCATTGATCTTTCACTTCTGTTGTTAATAATCAATTTCTCTGTTCTGTCGGCCCACGCTGCGGGTGGCAAATGGCAAGTGCTGAAAAACGTTGGCATTTCCGCCATGCACATGCAGCTCTTCAAAAACGACCGCATCGTCTTGTTCGACCGCACCGACTTCGGCAAATCCAACTTGTCCTTGCCCAACGGTAACTGCGTCAATAACGACTGCACCGCCCACTCCGCCGAGTTCGTCGTCCAAACCAATGCCGTCCGCCCCCTCACGGTCTTATCCGACGTCTGGTGCTCCTCCGGCTCAATGGACGCCTACGGAAACTTAATCCAAACCGGCGGCAACAACATCGGCGAGCGCCGCGTTAGAGTTTTCACGCCCTGCACGGGTTGTGATTGGAAGGAGATTGTGGACGGCTTAGCTGCTCGCCGTTGGTACGCCACTAATCATATTCTGCCTGATGGACGCGAAATAATCATCGGCGGCAGGGGGCAATTCAACTATGAATTTTATCCGAAGACAGCGTCTACAAGCAATGTCTACAGCTTGCCATTCCTTTCGCAGACCAATGACCCCGGTCAAGAAAACAATCTATACCCTTTTGTTTTTCTCAACCCTGATGGCAACTTATTTGTTTTCGCTAACAATCGAGCTATTTTGTTGGACTACGTGAAGAACGTCGTCGTTAAAACCTACCCGCAAATACCCGGTGGCGACCCGAGGTCGTACCCCAGCACGGGTTCAGCCGTATTGCTACCATTGAAGAACTTGATGGCTCCATCTGTTGAGGCTGAAGTTTTGGTCTGCGGTGGAGCTCCAAAAGGGTCTTTTGTCCAGGCAAATAAGGGTACTTTTGTGGAAGCTCTAAACACATGTGCTCGGATCAAAATAACAGACCCTAATGCACAGTGGATTGTTGAAACTATGCCTCAAGCTAGAGTCATGGGTGACATGTTATTGCTTTCAGACAGCACTGTTTTACTCATTAACGGTGCATCGTCTGGGGTTGCAGGTTGGGAAATCGGGCGTAATCCGGTTTTCAACCCAGTTGTGTACCGACCTGATAATGCAGTCGGGTCACGGTTCGAACAACAAAACCCTACCACCATACCACGGATGTACCATTCCTCAGCATTATTGGTACGTGACGGTAGAGTGATTGTTGGAGGTAGTAACCCACACGATAAATACCAGTTTGGCAGCGATGTGCTTTTCCCAACAGAACTGAGGTTAGAAGCATTTAGTCCTGAGTATCTCGATGCTAAGTACGCGAACTTGCGTCCTACAATCATTGCACCTGGAAACCAAGCCAAAATCCATTATGGAATAAAATTAGCCGTTCAATTCTCTCTTACGGGTACGTTTACAAAGAATTCAGTATCGGTGACGATGGTGGCGCCGCCTTTTAGCACGCATTCATTCTCGATGAATCAAAGGCTGTTGGTTCTTGCTGCGGAGAACGTACAACAGGTAGGGCCAACAACCTATCAAGTTCAAGTGACAACGCCGCCTTCGAAAAATCTTGCGCCTTCCGGATACTACATTCTCTACGTGGTTCACCAGCAAATTCCAAGTGAGGGCATCTTTGTCAAAATTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

537

Amino Acids

58.74

Weight (kDa)

8.52

Isoelectric Point (pI)

31.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 41 - 421 1.1e-173 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 430 - 535 1.2e-27 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000556)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19900 AT1G75620
fragaria_vesca FvH4_2g08320 FvH4_2g08340 FvH4_2g39130 FvH4_2g39150
malus_domestica MD08G1016600.v1.1 MD08G1016900.v1.1 MD08G1017000.v1.1 MD08G1082100.v1.1 MD13G1087700.v1.1 MD14G1007900.v1.1 MD15G1015700.v1.1 MD15G1015800.v1.1 MD15G1015900.v1.1 MD15G1016000.v1.1 MD15G1068600.v1.1 MD15G1068700.v1.1
prunus_persica Prupe.1G369700_v2.0.a1 Prupe.1G369800_v2.0.a1
pyrus_communis pycom08g01440 pycom08g01450 pycom08g01480 pycom15g01350
rosa_chinensis RchiOBHm_Chr4g0408881 RchiOBHm_Chr6g0263281 RchiOBHm_Chr6g0263301 RchiOBHm_Chr6g0263331 RchiOBHm_Chr6g0302251 RchiOBHm_Chr6g0302271 RchiOBHm_Chr6g0302321 RchiOBHm_Chr6g0302331
rosa_laevigata RLG00000008616 RLG00000011177 RLG00000011178 RLG00000011182 RLG00000014357 RLG00000014362 RLG00000014363 RLG00000014365 RLG00000018749
rosa_multiflora Rmu_co8182314.1_g000001 Rmu_co8224130.1_g000001 Rmu_co8328361.1_g000001 Rmu_co8367879.1_g000001 Rmu_sc0000310.1_g000016 Rmu_sc0000310.1_g000033 Rmu_sc0001855.1_g000020 Rmu_sc0002778.1_g000005 Rmu_sc0003089.1_g000001 Rmu_sc0003089.1_g000012 Rmu_sc0003089.1_g000021 Rmu_sc0003633.1_g000013 Rmu_sc0003633.1_g000022
rosa_roxburghii Rroxscaffold_176G00431040 Rroxscaffold_5G00353250 Rroxscaffold_7G00165850 Rroxscaffold_7G00165920 Rroxscaffold_7G00165930 Rroxscaffold_7G00204510 Rroxscaffold_7G00204560
rosa_rugosa Rorug02G0245300 Rorug04G0088500 Rorug06G0004200 Rorug06G0004300 Rorug06G0313500 Rorug06G0313600 Rorug06G0313700
rosa_samantha Rh4CG160500 Rh6AG123400 Rh6AG123700 Rh6AG124000 Rh6AG426200 Rh6AG426400 Rh6AG426600 Rh7CG259000
rosa_wichuraiana Rw4G012520 Rw6G010610 Rw6G010620 Rw6G010640 Rw6G010780 Rw6G036900 Rw6G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 152
AatII GACGTC 1 cut(s) 297
Acc36I ACCTGC 1 cut(s) 1010
AccB1I GGYRCC 1 cut(s) 1405
AccI GTMKAC 2 cut(s) 536, 549
AccII CGCG 3 cut(s) 372, 477, 1280
AccIII TCCGGA 1 cut(s) 1541
AclI AACGTT 1 cut(s) 105
AclWI GGATC 1 cut(s) 899
AcsI RAATTY 4 cut(s) 515, 1381, 1575, 1602
AcuI CTGAAG 1 cut(s) 822
AcyI GRCGYC 3 cut(s) 294, 321, 1406
AfaI GTAC 9 cut(s) 446, 737, 859, 1064, 1130, 1152, 1277, 1369, 1473
AfiI CCNNNNNNNGG 8 cut(s) 76, 280, 297, 395, 745, 746, 1122, 1586
AflIII ACRYGT 2 cut(s) 881, 960
AgsI TTSAA 7 cut(s) 139, 508, 772, 929, 1051, 1352, 1505
AhdI GACNNNNNGTC 2 cut(s) 12, 730
AjnI CCWGG 2 cut(s) 843, 1306
AluBI AGCT 7 cut(s) 133, 431, 555, 662, 824, 872, 944
AluI AGCT 7 cut(s) 133, 431, 555, 662, 824, 872, 944
Alw21I GWGCWC 3 cut(s) 305, 826, 889
Alw26I GTCTC 1 cut(s) 20
AlwI GGATC 1 cut(s) 899
Ama87I CYCGRG 1 cut(s) 727
Aor13HI TCCGGA 1 cut(s) 1541
AoxI GGCC 2 cut(s) 66, 1484
ApeKI GCWGC 5 cut(s) 74, 130, 431, 1209, 1460
ApoI RAATTY 4 cut(s) 515, 1381, 1575, 1602
ArsI GACNNNNNNTTYG 2 cut(s) 518, 550
AspLEI GCGC 3 cut(s) 369, 1408, 1537
AspS9I GGNCC 2 cut(s) 67, 1484
AsuC2I CCSGG 2 cut(s) 585, 717
AsuHPI GGTGA 3 cut(s) 968, 1405, 1559
AsuII TTCGAA 2 cut(s) 1095, 1523
AvaI CYCGRG 1 cut(s) 727
BaeI ACNNNNGTAYC 4 cut(s) 849, 882, 1112, 1145
BanI GGYRCC 1 cut(s) 1405
BanII GRGCYC 1 cut(s) 826
BbsI GAAGAC 2 cut(s) 11, 533
Bbv12I GWGCWC 3 cut(s) 305, 826, 889
BbvCI CCTCAGC 1 cut(s) 1138
BbvI GCAGC 5 cut(s) 61, 142, 418, 1221, 1447
BccI CCATC 5 cut(s) 464, 623, 775, 796, 1393
BceAI ACGGC 5 cut(s) 251, 423, 439, 740, 1331
BcgI CGANNNNNNTGC 4 cut(s) 157, 191, 340, 374
BciT130I CCWGG 2 cut(s) 845, 1308
BciVI GTATCC 1 cut(s) 1538
BcnI CCSGG 2 cut(s) 585, 717
BcoDI GTCTC 1 cut(s) 20
BfaI CTAG 1 cut(s) 945
BfmI CTRYAG 1 cut(s) 550
BfoI RGCGCY 2 cut(s) 370, 1409
BfuAI ACCTGC 1 cut(s) 1010
BfuI GTATCC 1 cut(s) 1538
BlpI GCTNAGC 1 cut(s) 427
Bme1390I CCNGG 4 cut(s) 585, 717, 845, 1308
BmeRI GACNNNNNGTC 2 cut(s) 12, 730
BmeT110I CYCGRG 1 cut(s) 727
BmgT120I GGNCC 2 cut(s) 67, 1484
BmiI GGNNCC 2 cut(s) 786, 1407
BmrFI CCNGG 4 cut(s) 585, 717, 845, 1308
BmrI ACTGGG 1 cut(s) 1049
BmsI GCATC 4 cut(s) 159, 1013, 1258, 1599
BmuI ACTGGG 1 cut(s) 1049
BoxI GACNNNNGTC 1 cut(s) 585
BpiI GAAGAC 2 cut(s) 11, 533
Bpu10I CCTNAGC 1 cut(s) 1138
Bpu1102I GCTNAGC 1 cut(s) 427
Bpu14I TTCGAA 2 cut(s) 1095, 1523
BpuEI CTTGAG 1 cut(s) 924
BpuMI CCSGG 2 cut(s) 585, 717
BsaAI YACGTR 3 cut(s) 679, 1154, 1561
BsaHI GRCGYC 3 cut(s) 294, 321, 1406
BsaJI CCNNGG 3 cut(s) 583, 728, 1121
BsaWI WCCGGW 2 cut(s) 1042, 1541
Bsc4I CCNNNNNNNGG 8 cut(s) 76, 280, 297, 395, 745, 746, 1122, 1586
Bse118I RCCGGY 1 cut(s) 344
Bse1I ACTGG 2 cut(s) 1055, 1201
Bse3DI GCAATG 2 cut(s) 550, 1299
BseAI TCCGGA 1 cut(s) 1541
BseBI CCWGG 2 cut(s) 845, 1308
BseDI CCNNGG 3 cut(s) 583, 728, 1121
BseGI GGATG 1 cut(s) 1131
BseLI CCNNNNNNNGG 8 cut(s) 76, 280, 297, 395, 745, 746, 1122, 1586
BseMI GCAATG 2 cut(s) 550, 1299
BseMII CTCAG 3 cut(s) 1152, 1226, 1248
BseNI ACTGG 2 cut(s) 1055, 1201
BseRI GAGGAG 1 cut(s) 295
BseXI GCAGC 5 cut(s) 61, 142, 418, 1221, 1447
BseYI CCCAGC 1 cut(s) 740
BsgI GTGCAG 2 cut(s) 211, 376
Bsh1236I CGCG 3 cut(s) 372, 477, 1280
Bsh1285I CGRYCG 2 cut(s) 148, 166
BshFI GGCC 2 cut(s) 68, 1486
BshNI GGYRCC 1 cut(s) 1405
BsiEI CGRYCG 2 cut(s) 148, 166
BsiHKAI GWGCWC 3 cut(s) 305, 826, 889
BsiHKCI CYCGRG 1 cut(s) 727
BsiSI CCGG 6 cut(s) 309, 345, 585, 717, 1043, 1542
BslI CCNNNNNNNGG 8 cut(s) 76, 280, 297, 395, 745, 746, 1122, 1586
BsmAI GTCTC 1 cut(s) 20
BsmI GAATGC 1 cut(s) 1423
BsnI GGCC 2 cut(s) 68, 1486
BsoBI CYCGRG 1 cut(s) 727
Bsp119I TTCGAA 2 cut(s) 1095, 1523
Bsp1286I GDGCHC 3 cut(s) 305, 826, 889
Bsp13I TCCGGA 1 cut(s) 1541
Bsp143I GATC 2 cut(s) 22, 891
Bsp1720I GCTNAGC 1 cut(s) 427
BspANI GGCC 2 cut(s) 68, 1486
BspCNI CTCAG 3 cut(s) 1151, 1227, 1249
BspEI TCCGGA 1 cut(s) 1541
BspFNI CGCG 3 cut(s) 372, 477, 1280
BspLI GGNNCC 2 cut(s) 786, 1407
BspMI ACCTGC 1 cut(s) 1010
BspPI GGATC 1 cut(s) 899
BspQI GCTCTTC 1 cut(s) 140
BspT104I TTCGAA 2 cut(s) 1095, 1523
BspT107I GGYRCC 1 cut(s) 1405
BsrDI GCAATG 2 cut(s) 550, 1299
BsrFI RCCGGY 1 cut(s) 344
BsrI ACTGG 2 cut(s) 1055, 1201
BssAI RCCGGY 1 cut(s) 344
BssECI CCNNGG 3 cut(s) 583, 728, 1121
BssMI GATC 2 cut(s) 22, 891
BssNI GRCGYC 3 cut(s) 294, 321, 1406
Bst2UI CCWGG 2 cut(s) 845, 1308
Bst4CI ACNGT 7 cut(s) 206, 283, 918, 985, 1001, 1092, 1160
Bst6I CTCTTC 1 cut(s) 140
BstACI GRCGYC 3 cut(s) 294, 321, 1406
BstBAI YACGTR 3 cut(s) 679, 1154, 1561
BstBI TTCGAA 2 cut(s) 1095, 1523
BstC8I GCNNGC 4 cut(s) 365, 436, 557, 1421
BstDEI CTNAG 5 cut(s) 427, 1138, 1235, 1257, 1272
BstDSI CCRYGG 1 cut(s) 1121
BstF5I GGATG 1 cut(s) 1131
BstFNI CGCG 3 cut(s) 372, 477, 1280
BstH2I RGCGCY 2 cut(s) 370, 1409
BstHHI GCGC 3 cut(s) 369, 1408, 1537
BstKTI GATC 2 cut(s) 25, 894
BstMAI GTCTC 1 cut(s) 20
BstMBI GATC 2 cut(s) 22, 891
BstMCI CGRYCG 2 cut(s) 148, 166
BstMWI GCNNNNNNNGC 6 cut(s) 74, 130, 239, 309, 369, 1277
BstNI CCWGG 2 cut(s) 845, 1308
BstNSI RCATGY 3 cut(s) 130, 885, 964
BstPAI GACNNNNGTC 1 cut(s) 585
BstSCI CCNGG 4 cut(s) 583, 715, 843, 1306
BstSFI CTRYAG 1 cut(s) 550
BstUI CGCG 3 cut(s) 372, 477, 1280
BstV1I GCAGC 5 cut(s) 61, 142, 418, 1221, 1447
BstV2I GAAGAC 2 cut(s) 11, 533
BsuI GTATCC 1 cut(s) 1538
BsuRI GGCC 2 cut(s) 68, 1486
BtgI CCRYGG 1 cut(s) 1121
BtgZI GCGATG 1 cut(s) 1227
BtsCI GGATG 1 cut(s) 1131
BtsIMutI CAGTG 2 cut(s) 923, 981
BveI ACCTGC 1 cut(s) 1010
Cac8I GCNNGC 4 cut(s) 365, 436, 557, 1421
CfoI GCGC 3 cut(s) 369, 1408, 1537
Cfr10I RCCGGY 1 cut(s) 344
Cfr13I GGNCC 2 cut(s) 67, 1484
CseI GACGC 5 cut(s) 202, 329, 483, 522, 1277
Csp6I GTAC 9 cut(s) 445, 736, 858, 1063, 1129, 1151, 1276, 1368, 1472
CviAII CATG 5 cut(s) 121, 127, 882, 952, 961
CviQI GTAC 9 cut(s) 445, 736, 858, 1063, 1129, 1151, 1276, 1368, 1472
DdeI CTNAG 5 cut(s) 427, 1138, 1235, 1257, 1272
DinI GGCGCC 1 cut(s) 1407
DpnI GATC 2 cut(s) 24, 893
DpnII GATC 2 cut(s) 22, 891
DrdI GACNNNNNNGTC 1 cut(s) 152
DriI GACNNNNNGTC 2 cut(s) 12, 730
DseDI GACNNNNNNGTC 1 cut(s) 152
Eam1104I CTCTTC 1 cut(s) 140
Eam1105I GACNNNNNGTC 2 cut(s) 12, 730
EarI CTCTTC 1 cut(s) 140
EciI GGCGGA 3 cut(s) 106, 229, 260
Ecl136II GAGCTC 1 cut(s) 824
Eco24I GRGCYC 1 cut(s) 826
Eco53kI GAGCTC 1 cut(s) 824
Eco57I CTGAAG 1 cut(s) 822
Eco88I CYCGRG 1 cut(s) 727
EcoICRI GAGCTC 1 cut(s) 824
EcoRI GAATTC 1 cut(s) 1381
EcoRII CCWGG 2 cut(s) 843, 1306
EcoT38I GRGCYC 1 cut(s) 826
EgeI GGCGCC 1 cut(s) 1407
EheI GGCGCC 1 cut(s) 1407
FaeI CATG 5 cut(s) 124, 130, 885, 955, 964
FatI CATG 5 cut(s) 120, 126, 881, 951, 960
FauI CCCGC 2 cut(s) 70, 714
FblI GTMKAC 2 cut(s) 536, 549
FokI GGATG 1 cut(s) 1138
FriOI GRGCYC 1 cut(s) 826
FspBI CTAG 1 cut(s) 945
GlaI GCGC 3 cut(s) 368, 1407, 1536
GsaI CCCAGC 1 cut(s) 744
HaeII RGCGCY 2 cut(s) 370, 1409
HaeIII GGCC 2 cut(s) 68, 1486
HapII CCGG 6 cut(s) 309, 345, 585, 717, 1043, 1542
HgaI GACGC 5 cut(s) 202, 329, 483, 522, 1277
HhaI GCGC 3 cut(s) 369, 1408, 1537
Hin1I GRCGYC 3 cut(s) 294, 321, 1406
Hin1II CATG 5 cut(s) 124, 130, 885, 955, 964
Hin6I GCGC 3 cut(s) 367, 1406, 1535
HinP1I GCGC 3 cut(s) 367, 1406, 1535
HinfI GANTC 2 cut(s) 948, 1438
HpaII CCGG 6 cut(s) 309, 345, 585, 717, 1043, 1542
HphI GGTGA 3 cut(s) 968, 1405, 1559
Hpy166II GTNNAC 6 cut(s) 421, 537, 550, 1063, 1374, 1567
Hpy188I TCNGA 4 cut(s) 292, 525, 891, 976
Hpy188III TCNNGA 5 cut(s) 590, 1256, 1265, 1432, 1542
Hpy8I GTNNAC 6 cut(s) 421, 537, 550, 1063, 1374, 1567
Hpy99I CGWCG 4 cut(s) 254, 296, 692, 695
HpyAV CCTTC 3 cut(s) 403, 1530, 1548
HpyCH4III ACNGT 7 cut(s) 206, 283, 918, 985, 1001, 1092, 1160
HpyCH4IV ACGT 8 cut(s) 105, 294, 678, 687, 1153, 1370, 1470, 1560
HpyCH4V TGCA 9 cut(s) 124, 130, 228, 393, 914, 1004, 1019, 1079, 1304
HpyF10VI GCNNNNNNNGC 6 cut(s) 74, 130, 239, 309, 369, 1277
HpyF3I CTNAG 5 cut(s) 427, 1138, 1235, 1257, 1272
HpySE526I ACGT 8 cut(s) 105, 294, 678, 687, 1153, 1370, 1470, 1560
Hsp92I GRCGYC 3 cut(s) 294, 321, 1406
Hsp92II CATG 5 cut(s) 124, 130, 885, 955, 964
HspAI GCGC 3 cut(s) 367, 1406, 1535
KasI GGCGCC 1 cut(s) 1405
Kpn2I TCCGGA 1 cut(s) 1541
Kzo9I GATC 2 cut(s) 22, 891
LguI GCTCTTC 1 cut(s) 140
LmnI GCTCC 4 cut(s) 308, 790, 821, 829
Lsp1109I GCAGC 5 cut(s) 61, 142, 418, 1221, 1447
LweI GCATC 4 cut(s) 159, 1013, 1258, 1599
MaeI CTAG 1 cut(s) 945
MaeII ACGT 8 cut(s) 105, 294, 678, 687, 1153, 1370, 1470, 1560
MaeIII GTNAC 7 cut(s) 206, 956, 1086, 1154, 1181, 1393, 1507
MalI GATC 2 cut(s) 24, 893
MboI GATC 2 cut(s) 22, 891
MboII GAAGA 5 cut(s) 16, 127, 538, 694, 784
MhlI GDGCHC 3 cut(s) 305, 826, 889
MluCI AATT 9 cut(s) 9, 49, 503, 515, 1340, 1352, 1381, 1575, 1602
Mly113I GGCGCC 1 cut(s) 1406
MlyI GAGTC 1 cut(s) 957
MmeI TCCRAC 4 cut(s) 210, 315, 651, 1153
MnlI CCTC 9 cut(s) 287, 316, 723, 790, 948, 1147, 1169, 1230, 1579
MroI TCCGGA 1 cut(s) 1541
MseI TTAA 4 cut(s) 41, 335, 696, 996
MslI CAYNNNNRTG 1 cut(s) 125
MspI CCGG 6 cut(s) 309, 345, 585, 717, 1043, 1542
MspR9I CCNGG 4 cut(s) 585, 717, 845, 1308
Mva1269I GAATGC 1 cut(s) 1423
MvaI CCWGG 2 cut(s) 845, 1308
MvnI CGCG 3 cut(s) 372, 477, 1280
MwoI GCNNNNNNNGC 6 cut(s) 74, 130, 239, 309, 369, 1277
NarI GGCGCC 1 cut(s) 1406
NciI CCSGG 2 cut(s) 585, 717
NdeII GATC 2 cut(s) 22, 891
NlaIII CATG 5 cut(s) 124, 130, 885, 955, 964
NlaIV GGNNCC 2 cut(s) 786, 1407
NmeAIII GCCGAG 1 cut(s) 268
NmuCI GTSAC 5 cut(s) 956, 1086, 1154, 1393, 1507
NspI RCATGY 3 cut(s) 130, 885, 964
NspV TTCGAA 2 cut(s) 1095, 1523
PciI ACATGT 2 cut(s) 881, 960
PciSI GCTCTTC 1 cut(s) 140
PcsI WCGNNNNNNNCGW 6 cut(s) 150, 159, 168, 210, 684, 1520
PctI GAATGC 1 cut(s) 1423
PfeI GAWTC 1 cut(s) 1438
PflFI GACNNNGTC 1 cut(s) 532
PleI GAGTC 1 cut(s) 956
PluTI GGCGCC 1 cut(s) 1409
PpsI GAGTC 1 cut(s) 956
Ppu21I YACGTR 3 cut(s) 679, 1154, 1561
PscI ACATGT 2 cut(s) 881, 960
PshAI GACNNNNGTC 1 cut(s) 585
Psp124BI GAGCTC 1 cut(s) 826
Psp1406I AACGTT 1 cut(s) 105
Psp6I CCWGG 2 cut(s) 843, 1306
PspFI CCCAGC 1 cut(s) 740
PspGI CCWGG 2 cut(s) 843, 1306
PspN4I GGNNCC 2 cut(s) 786, 1407
PspPI GGNCC 2 cut(s) 67, 1484
PsyI GACNNNGTC 1 cut(s) 532
RsaI GTAC 9 cut(s) 446, 737, 859, 1064, 1130, 1152, 1277, 1369, 1473
RsaNI GTAC 9 cut(s) 445, 736, 858, 1063, 1129, 1151, 1276, 1368, 1472
RseI CAYNNNNRTG 1 cut(s) 125
SacI GAGCTC 1 cut(s) 826
SapI GCTCTTC 1 cut(s) 140
SaqAI TTAA 4 cut(s) 41, 335, 696, 996
Sau3AI GATC 2 cut(s) 22, 891
Sau96I GGNCC 2 cut(s) 67, 1484
SchI GAGTC 1 cut(s) 957
ScrFI CCNGG 4 cut(s) 585, 717, 845, 1308
SduI GDGCHC 3 cut(s) 305, 826, 889
SfaNI GCATC 4 cut(s) 159, 1013, 1258, 1599
SfcI CTRYAG 1 cut(s) 550
SfoI GGCGCC 1 cut(s) 1407
SfuI TTCGAA 2 cut(s) 1095, 1523
SmiMI CAYNNNNRTG 1 cut(s) 125
SmlI CTYRAG 1 cut(s) 939
SmoI CTYRAG 1 cut(s) 939
Sse9I AATT 9 cut(s) 9, 49, 503, 515, 1340, 1352, 1381, 1575, 1602
SspDI GGCGCC 1 cut(s) 1405
SspMI CTAG 1 cut(s) 945
SstI GAGCTC 1 cut(s) 826
StyD4I CCNGG 4 cut(s) 583, 715, 843, 1306
TaaI ACNGT 7 cut(s) 206, 283, 918, 985, 1001, 1092, 1160
TaiI ACGT 8 cut(s) 108, 297, 681, 690, 1156, 1373, 1473, 1563
TaqI TCGA 6 cut(s) 162, 658, 1095, 1266, 1433, 1523
TasI AATT 9 cut(s) 9, 49, 503, 515, 1340, 1352, 1381, 1575, 1602
TauI GCSGC 5 cut(s) 351, 372, 495, 1411, 1519
TfiI GAWTC 1 cut(s) 1438
Tru1I TTAA 4 cut(s) 41, 335, 696, 996
Tru9I TTAA 4 cut(s) 41, 335, 696, 996
TscAI CASTG 2 cut(s) 923, 988
TseFI GTSAC 5 cut(s) 956, 1086, 1154, 1393, 1507
TseI GCWGC 5 cut(s) 74, 130, 431, 1209, 1460
Tsp45I GTSAC 5 cut(s) 956, 1086, 1154, 1393, 1507
TspDTI ATGAA 4 cut(s) 17, 528, 1416, 1451
TspGWI ACGGA 2 cut(s) 342, 1138
TspRI CASTG 2 cut(s) 923, 988
Tth111I GACNNNGTC 1 cut(s) 532
XapI RAATTY 4 cut(s) 515, 1381, 1575, 1602
XceI RCATGY 3 cut(s) 130, 885, 964
XcmI CCANNNNNNNNNTGG 1 cut(s) 77
XmiI GTMKAC 2 cut(s) 536, 549
XspI CTAG 1 cut(s) 945
ZraI GACGTC 1 cut(s) 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.