Rroxscaffold_7G00204560

Galactose oxidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000556
Physical Location & Seq
Reverse (-)
54014039 .. 54015972
1934 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00204560.1

Sequence Viewer

Length: 1515 bp
ATGCACATGCAGCTCCTTCACAACGACCGCGTCATCATGTTCGACCGCACCGACTTCGGAAAATCCAACCTCTCCCTTCCCAACGGCGTCTGCCGCAACAATCCCAACGACACGGCGCTTAAAGTCGACTGCACGGCTCACTCGGCAGAGTACGACGTGGCGTCTAACAATATCCGTCCCCTGTTCGTGTACTCGGACACGTGGTGCTCCTCAGGATCAGTAAACTCCAAAGGACGTCTGGTCCAGACGGGAGGTTTCAACGACGGAGATAGAAGGGTTAGGGTTTTTGATCCGTGTCCTACTTGTGACTGGAAAGAGATCGAGTTCGGGTTAGTCAACCGGAGATGGTACGCCACCAATCATATTCTGCCAGATGGACGGCAGATAATCATCGGCGGAACGCAGCAGTTCAACTACGAGTTTTACCCCAAAAGTGAAGGCTCAATGAACGCTCTCAGTTTGCCTTTTCTTGCTGAGACAAATGACGGCAAAGCCGTAGACAACAATCTCTACCCCTTTGTTTTTCTCAACGTTGACGGCAACCTTTTCATATTCGCCAACAACAGAGCTATATTGTTCGATTATGTTGCCGCTAAAATCGTGATGACGTACCCAACAATACCCGGTGGAGACCCGAGGTCGTATCCGAGCACCGGTTCAGCGGTGCTGTTACCTCTCAAGAGTTCAAAAGGTCAGGCTGTGGCAGCTGAGGTTTTAGTCTGCGGTGGAGCTCCCAAAGGCTCTTATGTTAATGCCCAAAGGGGAACTTTCGTGGAAGCATTGAAGACATGCGCTCGGATCAAAATAACCGACCCGAACCCGCAGTGGCTTGTGGAAGACATGCCTGTAGCTAGAGTCATGGGTGACATGACGTTACTTCCCAACGGTGATGTTTTAATTATCAACGGTGCCAGACTAGGTGCCGCGGGGATGGAGATCGGGCGGAATCCGGTACTCAACCCGGTTGTTTACAAGCCCGAAAATGCCGTCGGGTCACGGTTCGAGCAACAAAACCCTAGTACCATACCACGTATGTACCACTCTACTGCAGTACTGCTACGTGATGGAAGGGTACTCGTTGGAGGTAGTAACCCTCATTATCGTTACGAATTCTCAAACGTGCTTTTCCCAACCGAACTTGCCTTAGAAGCATTCTCTCCTAATTACTTGGACTCGCAATTCGCAAGTATACGCCCGACCATCTTATCTCCTCGGTCACAAGTTAAGGTTGGTTATGGAAAGAAGCTAGCCATTCGATTTTCGATAACGGGGAAAATAGCACTAGACTCGGTGTCCGTTACGATGGTGTTACCTTCATTTACTACCCATTCGTTCTCGATGAACCATAGGCTAGTAGTTCTTGCTTCCGAGAAGGTTAACGCAGTGGGGAACTTGAAGTTTCGAGTTCAGGTTACGACGCCGGCTTCCGGTAATCTTGCTCCGTCCGGATATTATCTTGTATATGTGGTTCATCAGCAGATTCCAAGTGCGGGCATTTGGGTCAAAATTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

504

Amino Acids

55.41

Weight (kDa)

9.0

Isoelectric Point (pI)

33.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 1 - 389 1.1e-184 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 398 - 503 8.1e-26 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000556)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19900 AT1G75620
fragaria_vesca FvH4_2g08320 FvH4_2g08340 FvH4_2g39130 FvH4_2g39150
malus_domestica MD08G1016600.v1.1 MD08G1016900.v1.1 MD08G1017000.v1.1 MD08G1082100.v1.1 MD13G1087700.v1.1 MD14G1007900.v1.1 MD15G1015700.v1.1 MD15G1015800.v1.1 MD15G1015900.v1.1 MD15G1016000.v1.1 MD15G1068600.v1.1 MD15G1068700.v1.1
prunus_persica Prupe.1G369700_v2.0.a1 Prupe.1G369800_v2.0.a1
pyrus_communis pycom08g01440 pycom08g01450 pycom08g01480 pycom15g01350
rosa_chinensis RchiOBHm_Chr4g0408881 RchiOBHm_Chr6g0263281 RchiOBHm_Chr6g0263301 RchiOBHm_Chr6g0263331 RchiOBHm_Chr6g0302251 RchiOBHm_Chr6g0302271 RchiOBHm_Chr6g0302321 RchiOBHm_Chr6g0302331
rosa_laevigata RLG00000008616 RLG00000011177 RLG00000011178 RLG00000011182 RLG00000014357 RLG00000014362 RLG00000014363 RLG00000014365 RLG00000018749
rosa_multiflora Rmu_co8182314.1_g000001 Rmu_co8224130.1_g000001 Rmu_co8328361.1_g000001 Rmu_co8367879.1_g000001 Rmu_sc0000310.1_g000016 Rmu_sc0000310.1_g000033 Rmu_sc0001855.1_g000020 Rmu_sc0002778.1_g000005 Rmu_sc0003089.1_g000001 Rmu_sc0003089.1_g000012 Rmu_sc0003089.1_g000021 Rmu_sc0003633.1_g000013 Rmu_sc0003633.1_g000022
rosa_roxburghii Rroxscaffold_176G00431040 Rroxscaffold_5G00353250 Rroxscaffold_7G00165850 Rroxscaffold_7G00165920 Rroxscaffold_7G00165930 Rroxscaffold_7G00204510 Rroxscaffold_7G00204560
rosa_rugosa Rorug02G0245300 Rorug04G0088500 Rorug06G0004200 Rorug06G0004300 Rorug06G0313500 Rorug06G0313600 Rorug06G0313700
rosa_samantha Rh4CG160500 Rh6AG123400 Rh6AG123700 Rh6AG124000 Rh6AG426200 Rh6AG426400 Rh6AG426600 Rh7CG259000
rosa_wichuraiana Rw4G012520 Rw6G010610 Rw6G010620 Rw6G010640 Rw6G010780 Rw6G036900 Rw6G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 238
AccB1I GGYRCC 2 cut(s) 908, 920
AccI GTMKAC 3 cut(s) 126, 498, 1189
AccII CGCG 2 cut(s) 30, 926
AccIII TCCGGA 1 cut(s) 1445
AclI AACGTT 1 cut(s) 531
AclWI GGATC 3 cut(s) 223, 284, 806
AcsI RAATTY 2 cut(s) 1109, 1506
AcvI CACGTG 1 cut(s) 201
AcyI GRCGYC 4 cut(s) 87, 161, 235, 1418
AdeI CACNNNGTG 1 cut(s) 204
AfaI GTAC 9 cut(s) 152, 191, 350, 611, 954, 1021, 1037, 1053, 1074
AfiI CCNNNNNNNGG 3 cut(s) 653, 1427, 1490
AflIII ACRYGT 1 cut(s) 198
AgeI ACCGGT 1 cut(s) 653
AgsI TTSAA 5 cut(s) 259, 412, 687, 784, 1396
AhdI GACNNNNNGTC 4 cut(s) 160, 239, 637, 1291
AjiI CACGTC 1 cut(s) 157
AluBI AGCT 6 cut(s) 13, 569, 707, 731, 851, 1246
AluI AGCT 6 cut(s) 13, 569, 707, 731, 851, 1246
Alw21I GWGCWC 3 cut(s) 209, 653, 733
Alw26I GTCTC 2 cut(s) 470, 624
AlwI GGATC 3 cut(s) 223, 284, 806
Ama87I CYCGRG 1 cut(s) 634
Aor13HI TCCGGA 1 cut(s) 1445
ApeKI GCWGC 3 cut(s) 10, 403, 704
ApoI RAATTY 2 cut(s) 1109, 1506
ArsI GACNNNNNNTTYG 4 cut(s) 972, 1004, 1163, 1195
AsiGI ACCGGT 1 cut(s) 653
AspLEI GCGC 2 cut(s) 118, 794
AspS9I GGNCC 1 cut(s) 241
AsuC2I CCSGG 2 cut(s) 624, 962
AsuHPI GGTGA 2 cut(s) 875, 899
AsuNHI GCTAGC 1 cut(s) 1246
AvaI CYCGRG 1 cut(s) 634
AvaII GGWCC 1 cut(s) 241
AxyI CCTNAGG 1 cut(s) 211
BaeI ACNNNNGTAYC 4 cut(s) 1003, 1019, 1036, 1052
BanI GGYRCC 2 cut(s) 908, 920
BanII GRGCYC 1 cut(s) 733
BbrPI CACGTG 1 cut(s) 201
BbsI GAAGAC 2 cut(s) 791, 843
Bbv12I GWGCWC 3 cut(s) 209, 653, 733
BbvCI CCTCAGC 1 cut(s) 708
BbvI GCAGC 3 cut(s) 22, 415, 716
BccI CCATC 6 cut(s) 339, 368, 925, 1058, 1208, 1297
BceAI ACGGC 8 cut(s) 100, 129, 150, 395, 479, 502, 553, 971
BcgI CGANNNNNNTGC 6 cut(s) 37, 71, 569, 603, 1269, 1303
BciVI GTATCC 1 cut(s) 654
BcnI CCSGG 2 cut(s) 624, 962
BcoDI GTCTC 2 cut(s) 470, 624
BfaI CTAG 6 cut(s) 852, 917, 1017, 1247, 1283, 1352
BfmI CTRYAG 2 cut(s) 846, 1047
BfoI RGCGCY 1 cut(s) 119
BfuI GTATCC 1 cut(s) 654
BisI GCNGC 6 cut(s) 11, 94, 404, 591, 705, 924
BlsI GCNGC 6 cut(s) 12, 95, 405, 592, 706, 925
BmcAI AGTACT 1 cut(s) 1053
Bme1390I CCNGG 2 cut(s) 624, 962
Bme18I GGWCC 1 cut(s) 241
BmeRI GACNNNNNGTC 4 cut(s) 160, 239, 637, 1291
BmeT110I CYCGRG 1 cut(s) 634
BmgBI CACGTC 1 cut(s) 157
BmgT120I GGNCC 1 cut(s) 241
BmiI GGNNCC 2 cut(s) 910, 922
BmrFI CCNGG 2 cut(s) 624, 962
BmtI GCTAGC 1 cut(s) 1250
BpiI GAAGAC 2 cut(s) 791, 843
Bpu10I CCTNAGC 1 cut(s) 708
BpuEI CTTGAG 1 cut(s) 662
BpuMI CCSGG 2 cut(s) 624, 962
BsaAI YACGTR 3 cut(s) 201, 1031, 1061
BsaBI GATNNNNATC 2 cut(s) 389, 935
BsaHI GRCGYC 4 cut(s) 87, 161, 235, 1418
BsaI GGTCTC 1 cut(s) 624
BsaJI CCNNGG 3 cut(s) 635, 924, 1211
BsaWI WCCGGW 5 cut(s) 339, 653, 949, 1427, 1445
Bsc4I CCNNNNNNNGG 3 cut(s) 653, 1427, 1490
Bse118I RCCGGY 2 cut(s) 653, 1420
Bse1I ACTGG 1 cut(s) 314
Bse21I CCTNAGG 1 cut(s) 211
Bse8I GATNNNNATC 2 cut(s) 389, 935
BseAI TCCGGA 1 cut(s) 1445
BseDI CCNNGG 3 cut(s) 635, 924, 1211
BseGI GGATG 1 cut(s) 936
BseJI GATNNNNATC 2 cut(s) 389, 935
BseLI CCNNNNNNNGG 3 cut(s) 653, 1427, 1490
BseMII CTCAG 4 cut(s) 225, 465, 469, 699
BseNI ACTGG 1 cut(s) 314
BseRI GAGGAG 2 cut(s) 199, 1200
BseXI GCAGC 3 cut(s) 22, 415, 716
BsgI GTGCAG 1 cut(s) 115
Bsh1236I CGCG 2 cut(s) 30, 926
Bsh1285I CGRYCG 2 cut(s) 28, 46
BshNI GGYRCC 2 cut(s) 908, 920
BshTI ACCGGT 1 cut(s) 653
BsiEI CGRYCG 2 cut(s) 28, 46
BsiHKAI GWGCWC 3 cut(s) 209, 653, 733
BsiHKCI CYCGRG 1 cut(s) 634
BsiSI CCGG 8 cut(s) 340, 624, 654, 950, 962, 1421, 1428, 1446
BslFI GGGAC 1 cut(s) 162
BslI CCNNNNNNNGG 3 cut(s) 653, 1427, 1490
BsmAI GTCTC 2 cut(s) 470, 624
BsmFI GGGAC 1 cut(s) 162
BsmI GAATGC 1 cut(s) 1151
Bso31I GGTCTC 1 cut(s) 624
BsoBI CYCGRG 1 cut(s) 634
Bsp1286I GDGCHC 3 cut(s) 209, 653, 733
Bsp13I TCCGGA 1 cut(s) 1445
Bsp143I GATC 5 cut(s) 215, 289, 318, 798, 936
BspCNI CTCAG 4 cut(s) 224, 466, 468, 700
BspEI TCCGGA 1 cut(s) 1445
BspFNI CGCG 2 cut(s) 30, 926
BspLI GGNNCC 2 cut(s) 910, 922
BspMAI CTGCAG 1 cut(s) 1051
BspOI GCTAGC 1 cut(s) 1250
BspPI GGATC 3 cut(s) 223, 284, 806
BspT107I GGYRCC 2 cut(s) 908, 920
BspTNI GGTCTC 1 cut(s) 624
BsrFI RCCGGY 2 cut(s) 653, 1420
BsrI ACTGG 1 cut(s) 314
BssAI RCCGGY 2 cut(s) 653, 1420
BssECI CCNNGG 3 cut(s) 635, 924, 1211
BssMI GATC 5 cut(s) 215, 289, 318, 798, 936
BssNAI GTATAC 1 cut(s) 1190
BssNI GRCGYC 4 cut(s) 87, 161, 235, 1418
Bst1107I GTATAC 1 cut(s) 1190
Bst4CI ACNGT 3 cut(s) 887, 908, 999
BstACI GRCGYC 4 cut(s) 87, 161, 235, 1418
BstBAI YACGTR 3 cut(s) 201, 1031, 1061
BstC8I GCNNGC 3 cut(s) 1248, 1422, 1492
BstDEI CTNAG 5 cut(s) 211, 455, 474, 708, 1144
BstDSI CCRYGG 1 cut(s) 924
BstF5I GGATG 1 cut(s) 936
BstFNI CGCG 2 cut(s) 30, 926
BstH2I RGCGCY 1 cut(s) 119
BstHHI GCGC 2 cut(s) 118, 794
BstKTI GATC 5 cut(s) 218, 292, 321, 801, 939
BstMAI GTCTC 2 cut(s) 470, 624
BstMBI GATC 5 cut(s) 215, 289, 318, 798, 936
BstMCI CGRYCG 2 cut(s) 28, 46
BstMWI GCNNNNNNNGC 5 cut(s) 10, 93, 143, 704, 1148
BstNSI RCATGY 3 cut(s) 10, 792, 844
BstSCI CCNGG 2 cut(s) 622, 960
BstSFI CTRYAG 2 cut(s) 846, 1047
BstUI CGCG 2 cut(s) 30, 926
BstV1I GCAGC 3 cut(s) 22, 415, 716
BstV2I GAAGAC 2 cut(s) 791, 843
BstZ17I GTATAC 1 cut(s) 1190
Bsu36I CCTNAGG 1 cut(s) 211
BsuI GTATCC 1 cut(s) 654
BtgI CCRYGG 1 cut(s) 924
BtrI CACGTC 1 cut(s) 157
BtsCI GGATG 1 cut(s) 936
BtsI GCAGTG 2 cut(s) 830, 1389
BtsIMutI CAGTG 2 cut(s) 830, 1389
Cac8I GCNNGC 3 cut(s) 1248, 1422, 1492
CfoI GCGC 2 cut(s) 118, 794
Cfr10I RCCGGY 2 cut(s) 653, 1420
Cfr13I GGNCC 1 cut(s) 241
Cfr42I CCGCGG 1 cut(s) 927
CseI GACGC 4 cut(s) 19, 76, 150, 1426
Csp6I GTAC 9 cut(s) 151, 190, 349, 610, 953, 1020, 1036, 1052, 1073
CspAI ACCGGT 1 cut(s) 653
CviAII CATG 6 cut(s) 7, 37, 789, 841, 859, 868
CviQI GTAC 9 cut(s) 151, 190, 349, 610, 953, 1020, 1036, 1052, 1073
DdeI CTNAG 5 cut(s) 211, 455, 474, 708, 1144
DpnI GATC 5 cut(s) 217, 291, 320, 800, 938
DpnII GATC 5 cut(s) 215, 289, 318, 798, 936
DraIII CACNNNGTG 1 cut(s) 204
DriI GACNNNNNGTC 4 cut(s) 160, 239, 637, 1291
Eam1105I GACNNNNNGTC 4 cut(s) 160, 239, 637, 1291
EciI GGCGGA 2 cut(s) 411, 958
Ecl136II GAGCTC 1 cut(s) 731
Eco24I GRGCYC 1 cut(s) 733
Eco31I GGTCTC 1 cut(s) 624
Eco47I GGWCC 1 cut(s) 241
Eco53kI GAGCTC 1 cut(s) 731
Eco72I CACGTG 1 cut(s) 201
Eco81I CCTNAGG 1 cut(s) 211
Eco88I CYCGRG 1 cut(s) 634
EcoICRI GAGCTC 1 cut(s) 731
EcoRI GAATTC 1 cut(s) 1109
EcoT38I GRGCYC 1 cut(s) 733
FaeI CATG 6 cut(s) 10, 40, 792, 844, 862, 871
FalI AAGNNNNNCTT 2 cut(s) 751, 783
FaqI GGGAC 1 cut(s) 162
FatI CATG 6 cut(s) 6, 36, 788, 840, 858, 867
FauI CCCGC 3 cut(s) 828, 919, 1483
FblI GTMKAC 3 cut(s) 126, 498, 1189
Fnu4HI GCNGC 6 cut(s) 11, 94, 404, 591, 705, 924
FokI GGATG 1 cut(s) 943
FriOI GRGCYC 1 cut(s) 733
Fsp4HI GCNGC 6 cut(s) 11, 94, 404, 591, 705, 924
FspBI CTAG 6 cut(s) 852, 917, 1017, 1247, 1283, 1352
GlaI GCGC 2 cut(s) 117, 793
GluI GCNGC 6 cut(s) 11, 94, 404, 591, 705, 924
HaeII RGCGCY 1 cut(s) 119
HapII CCGG 8 cut(s) 340, 624, 654, 950, 962, 1421, 1428, 1446
HgaI GACGC 4 cut(s) 19, 76, 150, 1426
HhaI GCGC 2 cut(s) 118, 794
Hin1I GRCGYC 4 cut(s) 87, 161, 235, 1418
Hin1II CATG 6 cut(s) 10, 40, 792, 844, 862, 871
Hin6I GCGC 2 cut(s) 116, 792
HinP1I GCGC 2 cut(s) 116, 792
HincII GTYRAC 4 cut(s) 127, 337, 535, 1378
HindII GTYRAC 4 cut(s) 127, 337, 535, 1378
HinfI GANTC 5 cut(s) 855, 946, 1172, 1286, 1480
HpaI GTTAAC 1 cut(s) 1378
HpaII CCGG 8 cut(s) 340, 624, 654, 950, 962, 1421, 1428, 1446
HphI GGTGA 2 cut(s) 875, 899
Hpy166II GTNNAC 9 cut(s) 127, 190, 223, 337, 499, 535, 970, 1190, 1378
Hpy188I TCNGA 5 cut(s) 59, 196, 648, 798, 1369
Hpy188III TCNNGA 6 cut(s) 213, 244, 601, 679, 1336, 1446
Hpy8I GTNNAC 9 cut(s) 127, 190, 223, 337, 499, 535, 970, 1190, 1378
Hpy99I CGWCG 4 cut(s) 158, 266, 992, 1420
HpyAV CCTTC 7 cut(s) 26, 86, 267, 431, 1062, 1323, 1366
HpyCH4III ACNGT 3 cut(s) 887, 908, 999
HpyCH4IV ACGT 9 cut(s) 156, 200, 235, 531, 608, 872, 1030, 1060, 1119
HpyCH4V TGCA 4 cut(s) 4, 10, 132, 1049
HpyF10VI GCNNNNNNNGC 5 cut(s) 10, 93, 143, 704, 1148
HpyF3I CTNAG 5 cut(s) 211, 455, 474, 708, 1144
HpySE526I ACGT 9 cut(s) 156, 200, 235, 531, 608, 872, 1030, 1060, 1119
Hsp92I GRCGYC 4 cut(s) 87, 161, 235, 1418
Hsp92II CATG 6 cut(s) 10, 40, 792, 844, 862, 871
HspAI GCGC 2 cut(s) 116, 792
Kpn2I TCCGGA 1 cut(s) 1445
KroI GCCGGC 1 cut(s) 1420
KroNI GCCGGC 1 cut(s) 1422
KspAI GTTAAC 1 cut(s) 1378
KspI CCGCGG 1 cut(s) 927
Kzo9I GATC 5 cut(s) 215, 289, 318, 798, 936
LmnI GCTCC 5 cut(s) 18, 212, 728, 736, 1444
Lsp1109I GCAGC 3 cut(s) 22, 415, 716
MaeI CTAG 6 cut(s) 852, 917, 1017, 1247, 1283, 1352
MaeII ACGT 9 cut(s) 156, 200, 235, 531, 608, 872, 1030, 1060, 1119
MalI GATC 5 cut(s) 217, 291, 320, 800, 938
MboI GATC 5 cut(s) 215, 289, 318, 798, 936
MboII GAAGA 2 cut(s) 796, 848
MhlI GDGCHC 3 cut(s) 209, 653, 733
MluCI AATT 5 cut(s) 897, 1109, 1162, 1178, 1506
MlyI GAGTC 3 cut(s) 864, 1166, 1280
MmeI TCCRAC 2 cut(s) 90, 1060
MnlI CCTC 9 cut(s) 80, 220, 245, 630, 684, 703, 1076, 1104, 1221
MroI TCCGGA 1 cut(s) 1445
MroNI GCCGGC 1 cut(s) 1420
MseI TTAA 5 cut(s) 120, 750, 896, 1224, 1377
MspA1I CMGCKG 3 cut(s) 662, 707, 926
MspI CCGG 8 cut(s) 340, 624, 654, 950, 962, 1421, 1428, 1446
MspR9I CCNGG 2 cut(s) 624, 962
Mva1269I GAATGC 1 cut(s) 1151
MvnI CGCG 2 cut(s) 30, 926
MwoI GCNNNNNNNGC 5 cut(s) 10, 93, 143, 704, 1148
NaeI GCCGGC 1 cut(s) 1422
NciI CCSGG 2 cut(s) 624, 962
NdeII GATC 5 cut(s) 215, 289, 318, 798, 936
NgoMIV GCCGGC 1 cut(s) 1420
NheI GCTAGC 1 cut(s) 1246
NlaIII CATG 6 cut(s) 10, 40, 792, 844, 862, 871
NlaIV GGNNCC 2 cut(s) 910, 922
NmeAIII GCCGAG 1 cut(s) 122
NmuCI GTSAC 4 cut(s) 305, 863, 993, 1215
NspI RCATGY 3 cut(s) 10, 792, 844
PcsI WCGNNNNNNNCGW 2 cut(s) 48, 492
PctI GAATGC 1 cut(s) 1151
PdiI GCCGGC 1 cut(s) 1422
PfeI GAWTC 2 cut(s) 946, 1480
PflFI GACNNNGTC 1 cut(s) 29
PinAI ACCGGT 1 cut(s) 653
PkrI GCNGC 6 cut(s) 12, 95, 405, 592, 706, 925
PleI GAGTC 3 cut(s) 863, 1166, 1280
PmaCI CACGTG 1 cut(s) 201
PmlI CACGTG 1 cut(s) 201
PpsI GAGTC 3 cut(s) 863, 1166, 1280
Ppu21I YACGTR 3 cut(s) 201, 1031, 1061
Psp124BI GAGCTC 1 cut(s) 733
Psp1406I AACGTT 1 cut(s) 531
PspCI CACGTG 1 cut(s) 201
PspN4I GGNNCC 2 cut(s) 910, 922
PspPI GGNCC 1 cut(s) 241
PsrI GAACNNNNNNTAC 2 cut(s) 1452, 1484
PstI CTGCAG 1 cut(s) 1051
PsyI GACNNNGTC 1 cut(s) 29
PvuII CAGCTG 1 cut(s) 707
RsaI GTAC 9 cut(s) 152, 191, 350, 611, 954, 1021, 1037, 1053, 1074
RsaNI GTAC 9 cut(s) 151, 190, 349, 610, 953, 1020, 1036, 1052, 1073
SacI GAGCTC 1 cut(s) 733
SacII CCGCGG 1 cut(s) 927
SalI GTCGAC 1 cut(s) 125
SaqAI TTAA 5 cut(s) 120, 750, 896, 1224, 1377
SatI GCNGC 6 cut(s) 11, 94, 404, 591, 705, 924
Sau3AI GATC 5 cut(s) 215, 289, 318, 798, 936
Sau96I GGNCC 1 cut(s) 241
ScaI AGTACT 1 cut(s) 1053
SchI GAGTC 3 cut(s) 864, 1166, 1280
ScrFI CCNGG 2 cut(s) 624, 962
SduI GDGCHC 3 cut(s) 209, 653, 733
SfcI CTRYAG 2 cut(s) 846, 1047
Sfr303I CCGCGG 1 cut(s) 927
SgrBI CCGCGG 1 cut(s) 927
SinI GGWCC 1 cut(s) 241
SmlI CTYRAG 1 cut(s) 677
SmoI CTYRAG 1 cut(s) 677
Sse9I AATT 5 cut(s) 897, 1109, 1162, 1178, 1506
SspMI CTAG 6 cut(s) 852, 917, 1017, 1247, 1283, 1352
SstI GAGCTC 1 cut(s) 733
StyD4I CCNGG 2 cut(s) 622, 960
TaaI ACNGT 3 cut(s) 887, 908, 999
TaiI ACGT 9 cut(s) 159, 203, 238, 534, 611, 875, 1033, 1063, 1122
TaqI TCGA 9 cut(s) 42, 126, 321, 579, 1002, 1255, 1262, 1337, 1402
TaqII GACCGA 1 cut(s) 1203
TasI AATT 5 cut(s) 897, 1109, 1162, 1178, 1506
TatI WGTACW 2 cut(s) 189, 1051
TauI GCSGC 3 cut(s) 96, 593, 926
TfiI GAWTC 2 cut(s) 946, 1480
Tru1I TTAA 5 cut(s) 120, 750, 896, 1224, 1377
Tru9I TTAA 5 cut(s) 120, 750, 896, 1224, 1377
TscAI CASTG 2 cut(s) 830, 1389
TseFI GTSAC 4 cut(s) 305, 863, 993, 1215
TseI GCWGC 3 cut(s) 10, 403, 704
Tsp45I GTSAC 4 cut(s) 305, 863, 993, 1215
TspDTI ATGAA 5 cut(s) 461, 538, 1305, 1355, 1460
TspGWI ACGGA 5 cut(s) 164, 279, 282, 1285, 1431
TspRI CASTG 2 cut(s) 830, 1389
Tth111I GACNNNGTC 1 cut(s) 29
VpaK11BI GGWCC 1 cut(s) 241
XapI RAATTY 2 cut(s) 1109, 1506
XceI RCATGY 3 cut(s) 10, 792, 844
XcmI CCANNNNNNNNNTGG 1 cut(s) 235
XmiI GTMKAC 3 cut(s) 126, 498, 1189
XspI CTAG 6 cut(s) 852, 917, 1017, 1247, 1283, 1352
ZraI GACGTC 1 cut(s) 236
ZrmI AGTACT 1 cut(s) 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.