Rroxscaffold_7G00165930

Galactose oxidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000556
Physical Location & Seq
Reverse (-)
7552815 .. 7554733
1919 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00165930.1

Sequence Viewer

Length: 1560 bp
ATGAAGACCTGCCCAACTTCCCCTCTCATTCTCTCATTCCTCTTCATATCCACTTTTCTCTTCCCCCTGACCCATGCCGCCGGCGGCAAATGGCAGCTGCTTGTGAAAAGCGTCGGCATTTCCGCCATGCACATGCAGCTACTCCACAACGACCGTGTCGTCATGTTCGACCGCACCGACTTCGGAAAATCCAACCTCCCCCTCCCCAACGGCGTCTGCCGCAACAACCCCAACGACACGGCGCTTAAAGTCGACTGCACGGCCCACTCCGCCGAGTACGACGTGGCGTCCAACAAAATCCGTCCTCTGTTTGTGTACTCCGACGTGTGGTGCTCCTCGGGGTCAGTAAACCCCAGCGGAAGTCTAGTCCAGACGGGAGGTTTCAACGATGGAGAGAGAAGGGTGAGGGTTTTTGACCCTTGTCCTACTTGTGACTGGAAAGAAATCGAGTTCGGGTTAGTCAACCGGAGATGGTATGCCACCAATCATATTCTGCCAGATGGACGGCAGATAATCATAGGCGGACGGCGGCAGTTCAACTACGAGTTTTATCCCAAAAGTGGAGGCTCAATGAACTCGCACAGTCTACCTTTTCTTGTTGAGACAAGTGACGGCAACGCCATAGAGAACAATCTCTACCCTTTTGTCTTTCTCAACCTTGACGGCAATCTTTTTATCTTTGCCAACAATAGAGCTATATTGTACGACTATGTTGCTGGTAAAATAGTGAAGACGTACCCCACAATACCCGGTGGGGACCCAAGGTCGTATCCGAGCAGCGGTTCAGCGGTGTTGCTACCTCTCAAGACTTCAAAAGGTCAGGCAGTGGCAGCTGAGGTTCTGGTTTGCGGTGGAGCTCCCAAAGGGTCTTATGTTAAGGCCGAAAGTGGGACTTTTGTGCCAGCATTGAAGACATGCGCTCGGATCAAGATAACCGACCCGAACCCGCAGTGGGTTGTGGAAAACATGCCTCTAGCTAGAGTCATGGGTGACATGACGTTACTAGCCAACGGTGACGTTTTAATTATCAACGGTGCCGGATCAGGTACTGCGGGGTGGGAGCTCGGGCGGAACCCGGTACTGTACCCGGTTGCTTACAAGCCCGATAATGCGGTCGGGTCACGGTTCGAGCAACAAAACCCGAGCACCATACCACGCATGTACCATTCCACTGCAGTACTGCTACGTGATGGTAGAGTGCTTGTTGGAGGTAGTAACCCTCATATTCGTTACGAGTTCACAAACGTGCTTTTCCCAACCGAACTTGCCTTAGAAGCATTCTCTCCTAATTACTTGGACTCGCCATTCGCAAGTATACGTCCGAGCATCTATTCACCTCAGTCACAAGTTACGGTTGGTTATGGACAGAAGCTAGCGGTTCAATTTTCGATAACGGGGAGAATACAACTGAATTCGGTGTATGTTACGATGGTGTCACCTTCATTTACTACGCATTCGTTCTCGATGAACCAGAGGCTAGTGGTTCTTGCTTCCGAGAATGTTAGAGCAGTGGGGAACTTGAAGTTTGAAGTTCAGGTTACGACGCCGGCTTCCCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

519

Amino Acids

56.84

Weight (kDa)

8.96

Isoelectric Point (pI)

39.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 43 - 431 8e-185 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 440 - 518 2.6e-13 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000556)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19900 AT1G75620
fragaria_vesca FvH4_2g08320 FvH4_2g08340 FvH4_2g39130 FvH4_2g39150
malus_domestica MD08G1016600.v1.1 MD08G1016900.v1.1 MD08G1017000.v1.1 MD08G1082100.v1.1 MD13G1087700.v1.1 MD14G1007900.v1.1 MD15G1015700.v1.1 MD15G1015800.v1.1 MD15G1015900.v1.1 MD15G1016000.v1.1 MD15G1068600.v1.1 MD15G1068700.v1.1
prunus_persica Prupe.1G369700_v2.0.a1 Prupe.1G369800_v2.0.a1
pyrus_communis pycom08g01440 pycom08g01450 pycom08g01480 pycom15g01350
rosa_chinensis RchiOBHm_Chr4g0408881 RchiOBHm_Chr6g0263281 RchiOBHm_Chr6g0263301 RchiOBHm_Chr6g0263331 RchiOBHm_Chr6g0302251 RchiOBHm_Chr6g0302271 RchiOBHm_Chr6g0302321 RchiOBHm_Chr6g0302331
rosa_laevigata RLG00000008616 RLG00000011177 RLG00000011178 RLG00000011182 RLG00000014357 RLG00000014362 RLG00000014363 RLG00000014365 RLG00000018749
rosa_multiflora Rmu_co8182314.1_g000001 Rmu_co8224130.1_g000001 Rmu_co8328361.1_g000001 Rmu_co8367879.1_g000001 Rmu_sc0000310.1_g000016 Rmu_sc0000310.1_g000033 Rmu_sc0001855.1_g000020 Rmu_sc0002778.1_g000005 Rmu_sc0003089.1_g000001 Rmu_sc0003089.1_g000012 Rmu_sc0003089.1_g000021 Rmu_sc0003633.1_g000013 Rmu_sc0003633.1_g000022
rosa_roxburghii Rroxscaffold_176G00431040 Rroxscaffold_5G00353250 Rroxscaffold_7G00165850 Rroxscaffold_7G00165920 Rroxscaffold_7G00165930 Rroxscaffold_7G00204510 Rroxscaffold_7G00204560
rosa_rugosa Rorug02G0245300 Rorug04G0088500 Rorug06G0004200 Rorug06G0004300 Rorug06G0313500 Rorug06G0313600 Rorug06G0313700
rosa_samantha Rh4CG160500 Rh6AG123400 Rh6AG123700 Rh6AG124000 Rh6AG426200 Rh6AG426400 Rh6AG426600 Rh7CG259000
rosa_wichuraiana Rw4G012520 Rw6G010610 Rw6G010620 Rw6G010640 Rw6G010780 Rw6G036900 Rw6G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 158
Acc36I ACCTGC 1 cut(s) 17
AccB1I GGYRCC 1 cut(s) 1034
AccI GTMKAC 3 cut(s) 252, 586, 1315
AclWI GGATC 2 cut(s) 932, 1048
AcsI RAATTY 1 cut(s) 1411
AcyI GRCGYC 3 cut(s) 213, 287, 1544
AfaI GTAC 9 cut(s) 278, 317, 704, 737, 1048, 1080, 1085, 1163, 1179
AfiI CCNNNNNNNGG 5 cut(s) 327, 560, 779, 888, 952
AflIII ACRYGT 1 cut(s) 324
AgsI TTSAA 7 cut(s) 385, 538, 813, 910, 1382, 1522, 1529
AhdI GACNNNNNGTC 2 cut(s) 286, 763
AjiI CACGTC 2 cut(s) 283, 325
AleI CACNNNNGTG 1 cut(s) 1244
AluBI AGCT 8 cut(s) 97, 139, 695, 833, 857, 977, 1063, 1372
AluI AGCT 8 cut(s) 97, 139, 695, 833, 857, 977, 1063, 1372
Alw21I GWGCWC 4 cut(s) 335, 859, 1065, 1148
Alw26I GTCTC 1 cut(s) 596
AlwI GGATC 2 cut(s) 932, 1048
AlwNI CAGNNNCTG 1 cut(s) 1049
Ama87I CYCGRG 3 cut(s) 337, 1064, 1141
AoxI GGCC 2 cut(s) 261, 879
ApeKI GCWGC 5 cut(s) 94, 97, 136, 777, 830
ApoI RAATTY 1 cut(s) 1411
ArsI GACNNNNNNTTYG 2 cut(s) 1289, 1321
AspLEI GCGC 2 cut(s) 244, 920
AspS9I GGNCC 2 cut(s) 262, 757
AsuC2I CCSGG 4 cut(s) 750, 1076, 1088, 1555
AsuHPI GGTGA 5 cut(s) 415, 1001, 1025, 1326, 1428
AsuNHI GCTAGC 1 cut(s) 1372
AvaI CYCGRG 3 cut(s) 337, 1064, 1141
AvaII GGWCC 1 cut(s) 757
BaeI ACNNNNGTAYC 2 cut(s) 1145, 1178
BanI GGYRCC 1 cut(s) 1034
BanII GRGCYC 2 cut(s) 859, 1065
BbsI GAAGAC 3 cut(s) 11, 737, 917
Bbv12I GWGCWC 4 cut(s) 335, 859, 1065, 1148
BbvCI CCTCAGC 1 cut(s) 834
BbvI GCAGC 5 cut(s) 84, 106, 148, 789, 842
BccI CCATC 5 cut(s) 383, 465, 494, 1184, 1423
BceAI ACGGC 7 cut(s) 226, 255, 276, 521, 542, 628, 679
BcgI CGANNNNNNTGC 4 cut(s) 163, 197, 695, 729
BciVI GTATCC 1 cut(s) 780
BcnI CCSGG 4 cut(s) 750, 1076, 1088, 1555
BcoDI GTCTC 1 cut(s) 596
BfaI CTAG 6 cut(s) 365, 974, 978, 1004, 1373, 1478
BfmI CTRYAG 1 cut(s) 1173
BfoI RGCGCY 1 cut(s) 245
BfuAI ACCTGC 1 cut(s) 17
BfuI GTATCC 1 cut(s) 780
BisI GCNGC 9 cut(s) 78, 85, 95, 98, 137, 220, 530, 778, 831
BlsI GCNGC 9 cut(s) 79, 86, 96, 99, 138, 221, 531, 779, 832
BmcAI AGTACT 1 cut(s) 1179
Bme1390I CCNGG 4 cut(s) 750, 1076, 1088, 1555
Bme18I GGWCC 1 cut(s) 757
BmeRI GACNNNNNGTC 2 cut(s) 286, 763
BmeT110I CYCGRG 3 cut(s) 337, 1064, 1141
BmgBI CACGTC 2 cut(s) 283, 325
BmgT120I GGNCC 2 cut(s) 262, 757
BmiI GGNNCC 4 cut(s) 758, 759, 1036, 1073
BmrFI CCNGG 4 cut(s) 750, 1076, 1088, 1555
BmsI GCATC 1 cut(s) 1335
BmtI GCTAGC 1 cut(s) 1376
BoxI GACNNNNGTC 1 cut(s) 420
BpiI GAAGAC 3 cut(s) 11, 737, 917
Bpu10I CCTNAGC 1 cut(s) 834
BpuEI CTTGAG 1 cut(s) 788
BpuMI CCSGG 4 cut(s) 750, 1076, 1088, 1555
BsaAI YACGTR 1 cut(s) 1187
BsaHI GRCGYC 3 cut(s) 213, 287, 1544
BsaJI CCNNGG 2 cut(s) 336, 761
BsaWI WCCGGW 1 cut(s) 465
Bsc4I CCNNNNNNNGG 5 cut(s) 327, 560, 779, 888, 952
Bse118I RCCGGY 2 cut(s) 80, 1546
Bse1I ACTGG 1 cut(s) 440
BseDI CCNNGG 2 cut(s) 336, 761
BseLI CCNNNNNNNGG 5 cut(s) 327, 560, 779, 888, 952
BseMII CTCAG 2 cut(s) 825, 1352
BseNI ACTGG 1 cut(s) 440
BseRI GAGGAG 1 cut(s) 325
BseXI GCAGC 5 cut(s) 84, 106, 148, 789, 842
BseYI CCCAGC 1 cut(s) 353
BsgI GTGCAG 1 cut(s) 241
Bsh1285I CGRYCG 3 cut(s) 154, 172, 1116
BshFI GGCC 2 cut(s) 263, 881
BshNI GGYRCC 1 cut(s) 1034
BsiEI CGRYCG 3 cut(s) 154, 172, 1116
BsiHKAI GWGCWC 4 cut(s) 335, 859, 1065, 1148
BsiHKCI CYCGRG 3 cut(s) 337, 1064, 1141
BsiSI CCGG 8 cut(s) 81, 466, 750, 1038, 1076, 1088, 1547, 1555
BslFI GGGAC 2 cut(s) 770, 904
BslI CCNNNNNNNGG 5 cut(s) 327, 560, 779, 888, 952
BsmAI GTCTC 1 cut(s) 596
BsmFI GGGAC 2 cut(s) 770, 904
BsmI GAATGC 2 cut(s) 1277, 1453
BsnI GGCC 2 cut(s) 263, 881
BsoBI CYCGRG 3 cut(s) 337, 1064, 1141
Bsp1286I GDGCHC 4 cut(s) 335, 859, 1065, 1148
Bsp143I GATC 2 cut(s) 924, 1040
BspANI GGCC 2 cut(s) 263, 881
BspCNI CTCAG 2 cut(s) 826, 1351
BspLI GGNNCC 4 cut(s) 758, 759, 1036, 1073
BspMAI CTGCAG 1 cut(s) 1177
BspMI ACCTGC 1 cut(s) 17
BspOI GCTAGC 1 cut(s) 1376
BspPI GGATC 2 cut(s) 932, 1048
BspT107I GGYRCC 1 cut(s) 1034
BsrFI RCCGGY 2 cut(s) 80, 1546
BsrI ACTGG 1 cut(s) 440
BssAI RCCGGY 2 cut(s) 80, 1546
BssECI CCNNGG 2 cut(s) 336, 761
BssMI GATC 2 cut(s) 924, 1040
BssNAI GTATAC 1 cut(s) 1316
BssNI GRCGYC 3 cut(s) 213, 287, 1544
BssT1I CCWWGG 1 cut(s) 761
Bst1107I GTATAC 1 cut(s) 1316
Bst4CI ACNGT 7 cut(s) 155, 584, 1013, 1034, 1083, 1125, 1354
Bst6I CTCTTC 2 cut(s) 47, 65
BstACI GRCGYC 3 cut(s) 213, 287, 1544
BstBAI YACGTR 1 cut(s) 1187
BstC8I GCNNGC 4 cut(s) 82, 903, 1374, 1548
BstDEI CTNAG 3 cut(s) 834, 1270, 1338
BstH2I RGCGCY 1 cut(s) 245
BstHHI GCGC 2 cut(s) 244, 920
BstKTI GATC 2 cut(s) 927, 1043
BstMAI GTCTC 1 cut(s) 596
BstMBI GATC 2 cut(s) 924, 1040
BstMCI CGRYCG 3 cut(s) 154, 172, 1116
BstMWI GCNNNNNNNGC 5 cut(s) 136, 219, 269, 830, 1274
BstNSI RCATGY 4 cut(s) 136, 918, 970, 1162
BstPAI GACNNNNGTC 1 cut(s) 420
BstSCI CCNGG 4 cut(s) 748, 1074, 1086, 1553
BstSFI CTRYAG 1 cut(s) 1173
BstV1I GCAGC 5 cut(s) 84, 106, 148, 789, 842
BstV2I GAAGAC 3 cut(s) 11, 737, 917
BstZ17I GTATAC 1 cut(s) 1316
BsuI GTATCC 1 cut(s) 780
BsuRI GGCC 2 cut(s) 263, 881
BtrI CACGTC 2 cut(s) 283, 325
BtsI GCAGTG 4 cut(s) 831, 956, 1170, 1515
BtsIMutI CAGTG 4 cut(s) 831, 956, 1170, 1515
BveI ACCTGC 1 cut(s) 17
Cac8I GCNNGC 4 cut(s) 82, 903, 1374, 1548
CaiI CAGNNNCTG 1 cut(s) 1049
CfoI GCGC 2 cut(s) 244, 920
Cfr10I RCCGGY 2 cut(s) 80, 1546
Cfr13I GGNCC 2 cut(s) 262, 757
CseI GACGC 4 cut(s) 100, 202, 276, 1552
Csp6I GTAC 9 cut(s) 277, 316, 703, 736, 1047, 1079, 1084, 1162, 1178
CviAII CATG 9 cut(s) 74, 127, 133, 163, 915, 967, 985, 994, 1159
CviQI GTAC 9 cut(s) 277, 316, 703, 736, 1047, 1079, 1084, 1162, 1178
DdeI CTNAG 3 cut(s) 834, 1270, 1338
DpnI GATC 2 cut(s) 926, 1042
DpnII GATC 2 cut(s) 924, 1040
DrdI GACNNNNNNGTC 1 cut(s) 158
DriI GACNNNNNGTC 2 cut(s) 286, 763
DseDI GACNNNNNNGTC 1 cut(s) 158
Eam1104I CTCTTC 2 cut(s) 47, 65
Eam1105I GACNNNNNGTC 2 cut(s) 286, 763
EarI CTCTTC 2 cut(s) 47, 65
EciI GGCGGA 4 cut(s) 112, 259, 537, 1084
Ecl136II GAGCTC 2 cut(s) 857, 1063
Eco130I CCWWGG 1 cut(s) 761
Eco24I GRGCYC 2 cut(s) 859, 1065
Eco47I GGWCC 1 cut(s) 757
Eco53kI GAGCTC 2 cut(s) 857, 1063
Eco88I CYCGRG 3 cut(s) 337, 1064, 1141
EcoICRI GAGCTC 2 cut(s) 857, 1063
EcoO109I RGGNCCY 1 cut(s) 757
EcoRI GAATTC 1 cut(s) 1411
EcoT14I CCWWGG 1 cut(s) 761
EcoT38I GRGCYC 2 cut(s) 859, 1065
ErhI CCWWGG 1 cut(s) 761
FaeI CATG 9 cut(s) 77, 130, 136, 166, 918, 970, 988, 997, 1162
FalI AAGNNNNNCTT 2 cut(s) 877, 909
FaqI GGGAC 2 cut(s) 770, 904
FatI CATG 9 cut(s) 73, 126, 132, 162, 914, 966, 984, 993, 1158
FauI CCCGC 2 cut(s) 954, 1045
FblI GTMKAC 3 cut(s) 252, 586, 1315
Fnu4HI GCNGC 9 cut(s) 78, 85, 95, 98, 137, 220, 530, 778, 831
FriOI GRGCYC 2 cut(s) 859, 1065
Fsp4HI GCNGC 9 cut(s) 78, 85, 95, 98, 137, 220, 530, 778, 831
FspBI CTAG 6 cut(s) 365, 974, 978, 1004, 1373, 1478
GlaI GCGC 2 cut(s) 243, 919
GluI GCNGC 9 cut(s) 78, 85, 95, 98, 137, 220, 530, 778, 831
GsaI CCCAGC 1 cut(s) 357
HaeII RGCGCY 1 cut(s) 245
HaeIII GGCC 2 cut(s) 263, 881
HapII CCGG 8 cut(s) 81, 466, 750, 1038, 1076, 1088, 1547, 1555
HgaI GACGC 4 cut(s) 100, 202, 276, 1552
HhaI GCGC 2 cut(s) 244, 920
Hin1I GRCGYC 3 cut(s) 213, 287, 1544
Hin1II CATG 9 cut(s) 77, 130, 136, 166, 918, 970, 988, 997, 1162
Hin6I GCGC 2 cut(s) 242, 918
HinP1I GCGC 2 cut(s) 242, 918
HincII GTYRAC 2 cut(s) 253, 463
HindII GTYRAC 2 cut(s) 253, 463
HinfI GANTC 2 cut(s) 981, 1298
HpaII CCGG 8 cut(s) 81, 466, 750, 1038, 1076, 1088, 1547, 1555
HphI GGTGA 5 cut(s) 415, 1001, 1025, 1326, 1428
Hpy166II GTNNAC 7 cut(s) 253, 316, 349, 463, 587, 1239, 1316
Hpy188I TCNGA 6 cut(s) 185, 322, 774, 924, 1323, 1495
Hpy188III TCNNGA 4 cut(s) 370, 805, 928, 1462
Hpy8I GTNNAC 7 cut(s) 253, 316, 349, 463, 587, 1239, 1316
Hpy99I CGWCG 4 cut(s) 116, 284, 326, 1546
HpyAV CCTTC 2 cut(s) 393, 1449
HpyCH4III ACNGT 7 cut(s) 155, 584, 1013, 1034, 1083, 1125, 1354
HpyCH4IV ACGT 8 cut(s) 282, 324, 734, 998, 1017, 1186, 1245, 1318
HpyCH4V TGCA 4 cut(s) 130, 136, 258, 1175
HpyF10VI GCNNNNNNNGC 5 cut(s) 136, 219, 269, 830, 1274
HpyF3I CTNAG 3 cut(s) 834, 1270, 1338
HpySE526I ACGT 8 cut(s) 282, 324, 734, 998, 1017, 1186, 1245, 1318
Hsp92I GRCGYC 3 cut(s) 213, 287, 1544
Hsp92II CATG 9 cut(s) 77, 130, 136, 166, 918, 970, 988, 997, 1162
HspAI GCGC 2 cut(s) 242, 918
KflI GGGWCCC 1 cut(s) 757
KroI GCCGGC 2 cut(s) 80, 1546
KroNI GCCGGC 2 cut(s) 82, 1548
Kzo9I GATC 2 cut(s) 924, 1040
LmnI GCTCC 4 cut(s) 338, 854, 862, 1060
Lsp1109I GCAGC 5 cut(s) 84, 106, 148, 789, 842
LweI GCATC 1 cut(s) 1335
MaeI CTAG 6 cut(s) 365, 974, 978, 1004, 1373, 1478
MaeII ACGT 8 cut(s) 282, 324, 734, 998, 1017, 1186, 1245, 1318
MalI GATC 2 cut(s) 926, 1042
MboI GATC 2 cut(s) 924, 1040
MboII GAAGA 5 cut(s) 16, 34, 52, 742, 922
MhlI GDGCHC 4 cut(s) 335, 859, 1065, 1148
MluCI AATT 4 cut(s) 1023, 1288, 1382, 1411
MlyI GAGTC 2 cut(s) 990, 1292
MmeI TCCRAC 4 cut(s) 216, 315, 345, 1186
MreI CGCCGGCG 1 cut(s) 80
MroNI GCCGGC 2 cut(s) 80, 1546
MseI TTAA 3 cut(s) 246, 876, 1022
MslI CAYNNNNRTG 2 cut(s) 131, 1244
MspA1I CMGCKG 5 cut(s) 97, 357, 780, 788, 833
MspI CCGG 8 cut(s) 81, 466, 750, 1038, 1076, 1088, 1547, 1555
MspR9I CCNGG 4 cut(s) 750, 1076, 1088, 1555
Mva1269I GAATGC 2 cut(s) 1277, 1453
MwoI GCNNNNNNNGC 5 cut(s) 136, 219, 269, 830, 1274
NaeI GCCGGC 2 cut(s) 82, 1548
NciI CCSGG 4 cut(s) 750, 1076, 1088, 1555
NdeII GATC 2 cut(s) 924, 1040
NgoMIV GCCGGC 2 cut(s) 80, 1546
NheI GCTAGC 1 cut(s) 1372
NlaIII CATG 9 cut(s) 77, 130, 136, 166, 918, 970, 988, 997, 1162
NlaIV GGNNCC 4 cut(s) 758, 759, 1036, 1073
NmeAIII GCCGAG 1 cut(s) 298
NmuCI GTSAC 7 cut(s) 431, 608, 989, 1013, 1119, 1341, 1434
NspI RCATGY 4 cut(s) 136, 918, 970, 1162
OliI CACNNNNGTG 1 cut(s) 1244
PcsI WCGNNNNNNNCGW 3 cut(s) 156, 165, 174
PctI GAATGC 2 cut(s) 1277, 1453
PdiI GCCGGC 2 cut(s) 82, 1548
PflFI GACNNNGTC 1 cut(s) 155
PkrI GCNGC 9 cut(s) 79, 86, 96, 99, 138, 221, 531, 779, 832
PleI GAGTC 2 cut(s) 989, 1292
PpsI GAGTC 2 cut(s) 989, 1292
Ppu21I YACGTR 1 cut(s) 1187
PpuMI RGGWCCY 1 cut(s) 757
PshAI GACNNNNGTC 1 cut(s) 420
Psp124BI GAGCTC 2 cut(s) 859, 1065
Psp5II RGGWCCY 1 cut(s) 757
PspFI CCCAGC 1 cut(s) 353
PspN4I GGNNCC 4 cut(s) 758, 759, 1036, 1073
PspPI GGNCC 2 cut(s) 262, 757
PspPPI RGGWCCY 1 cut(s) 757
PsrI GAACNNNNNNTAC 2 cut(s) 620, 652
PstI CTGCAG 1 cut(s) 1177
PstNI CAGNNNCTG 1 cut(s) 1049
PsyI GACNNNGTC 1 cut(s) 155
PvuII CAGCTG 2 cut(s) 97, 833
RsaI GTAC 9 cut(s) 278, 317, 704, 737, 1048, 1080, 1085, 1163, 1179
RsaNI GTAC 9 cut(s) 277, 316, 703, 736, 1047, 1079, 1084, 1162, 1178
RseI CAYNNNNRTG 2 cut(s) 131, 1244
SacI GAGCTC 2 cut(s) 859, 1065
SalI GTCGAC 1 cut(s) 251
SaqAI TTAA 3 cut(s) 246, 876, 1022
SatI GCNGC 9 cut(s) 78, 85, 95, 98, 137, 220, 530, 778, 831
Sau3AI GATC 2 cut(s) 924, 1040
Sau96I GGNCC 2 cut(s) 262, 757
ScaI AGTACT 1 cut(s) 1179
SchI GAGTC 2 cut(s) 990, 1292
ScrFI CCNGG 4 cut(s) 750, 1076, 1088, 1555
SduI GDGCHC 4 cut(s) 335, 859, 1065, 1148
SfaNI GCATC 1 cut(s) 1335
SfcI CTRYAG 1 cut(s) 1173
SgrAI CRCCGGYG 1 cut(s) 80
SinI GGWCC 1 cut(s) 757
SmiMI CAYNNNNRTG 2 cut(s) 131, 1244
SmlI CTYRAG 1 cut(s) 803
SmoI CTYRAG 1 cut(s) 803
Sse9I AATT 4 cut(s) 1023, 1288, 1382, 1411
SspMI CTAG 6 cut(s) 365, 974, 978, 1004, 1373, 1478
SstI GAGCTC 2 cut(s) 859, 1065
StyD4I CCNGG 4 cut(s) 748, 1074, 1086, 1553
StyI CCWWGG 1 cut(s) 761
TaaI ACNGT 7 cut(s) 155, 584, 1013, 1034, 1083, 1125, 1354
TaiI ACGT 8 cut(s) 285, 327, 737, 1001, 1020, 1189, 1248, 1321
TaqI TCGA 6 cut(s) 168, 252, 447, 1128, 1388, 1463
TasI AATT 4 cut(s) 1023, 1288, 1382, 1411
TatI WGTACW 2 cut(s) 315, 1177
TauI GCSGC 4 cut(s) 80, 87, 222, 532
Tru1I TTAA 3 cut(s) 246, 876, 1022
Tru9I TTAA 3 cut(s) 246, 876, 1022
TscAI CASTG 4 cut(s) 831, 956, 1177, 1515
TseFI GTSAC 7 cut(s) 431, 608, 989, 1013, 1119, 1341, 1434
TseI GCWGC 5 cut(s) 94, 97, 136, 777, 830
Tsp45I GTSAC 7 cut(s) 431, 608, 989, 1013, 1119, 1341, 1434
TspDTI ATGAA 5 cut(s) 17, 34, 587, 1431, 1481
TspGWI ACGGA 1 cut(s) 290
TspRI CASTG 4 cut(s) 831, 956, 1177, 1515
Tth111I GACNNNGTC 1 cut(s) 155
VpaK11BI GGWCC 1 cut(s) 757
XapI RAATTY 1 cut(s) 1411
XceI RCATGY 4 cut(s) 136, 918, 970, 1162
XmiI GTMKAC 3 cut(s) 252, 586, 1315
XspI CTAG 6 cut(s) 365, 974, 978, 1004, 1373, 1478
ZrmI AGTACT 1 cut(s) 1179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.