RLG00000014365

Galactose oxidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000556
Physical Location & Seq
Reverse (-)
52190102 .. 52191856
1755 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014365

Sequence Viewer

Length: 1650 bp
ATGAATATGAAGAAGTGCCCAACTCTACCCCGTCTCATTGTTTCATTCCTCTTCATATCCACTTTTCTCTTCTCCCTGACCTACGCCGCCGGCGGCAAATGGGAGCTGCTTCTGAAAAGCGTCGGCATTTCAGCCATGCACATGCAGCTCCTTCACAACGACCGCGTCATCATGTTCGACCGCACCGACTTCGGAAAATCCAACCTCTCCCTTCCCAACGGCGTCTGCCGCAACAATCCCAACGACACGGCGCTTAAAGTCGACTGCACGGCTCACTCGGCCGAGTACGACGTGGCGTCTAACAATATCCGTCCCCTGCTCGTGTACTCGGACACGTGGTGCTCCTCGGGATCAGTAAACTCCAAAGGACGTCTGGTCCAGACGGGAGGTTTCAACGACGGAGATAGAAGGGTTAGGGTTTTTGATCCGTGTCCTACTTGTGACTGGAAAGAGATCGAGTTCGGGTTAGTCAACCGGAGATGGTACGCCAGCAATCATATTCTGCCAGATGGACGGCAGATAATCATCGGCGGAACGCAGCAGTTCAACTACGAGTTTTACCCCAAAAGTGAAGGCTCAATGAACGCTCTCAGTTTGCCTTTTCTTGCTGAGACAAGTGATGGCAAAGCCATAGACAACAATCTCTACCCCTTTGTTTTTCTCAACGTTGACGGCAACCTTTTCATATTCGCCAACAATAGAGCTATATTGTTCGATTATGTTGCCGCTAAAATCGTGAAGACGTACCCAACAATACCCGGTGGAGACCCGAGGTCGTATCCGAGCACTGGTTCAGCGGTGCTGTTACCTCTCAAGAGTTCAAAAGGTCAGGCTGTGGCAGCTGAGGTTTTAGTCTGCGGTGGAGCTCCCAAAGGCTCTTATGTTAATGCCCAAAGGGGAACTTTCGTGGAAGCATTGAAGACATGCGCTCGGATCAAAATAACCGACCCAAACCCGCAGTGGCTTGTGGAAGACATGCCTCTAGCTAGAGTCATGGGTGACATGACGTTACTTCCCAACGGTAACGTTGTAATTATCAACGGTGCCGGACTAGGTGCCGCGGGGTTGGAGTTCGGGCGGAATCCGGTACTCAACCCGGTTGTTTACAAGCCCGATAATGCGGTCGGGTCACGGTTCGAGCAACAAAACCCTAGTACCATACCACGTATGTACCACTCTACTGCAGTACTGCTACGTGATGGAAGGGTACTCGTTGGAGGTAGTAACCCTCATTATCGTTACGAGTTCTCAAACGTGCTTTTCCCAACCGAACTTGCCTTAGAAGCATTCTCTCCTAATTACTTGGACTCGCAATTCGCAAGTATACGCCCGACCATCTTATCACCTCGGTCACAAGTTAAGGTTGGTTATGGAAAGAAGCTAGCCATTCGATTTTCGATTACGGGGAAAATAGCACTAGACTCGGTGTCCGTTACGATGGTGTTACCTTCATTTACTACCCATTCGTTCTCGATGAACCATAGGCTAGTAGTTCTTGCTTCCGAGAAGGTTAACTCACTGGGGAACTTGAAGTTTCGAGTTCAGGTTACGACGCCGGCTTCCGGTAATCTTGCTCCGTCCGGATATTATCTTGTATATGTGGTTCATCAGCAGATTCCAAGTGCGGGCATTTGGGTCAAAATTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

550

Amino Acids

60.26

Weight (kDa)

9.25

Isoelectric Point (pI)

31.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 46 - 434 6.4e-184 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 443 - 548 9.9e-26 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000556)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19900 AT1G75620
fragaria_vesca FvH4_2g08320 FvH4_2g08340 FvH4_2g39130 FvH4_2g39150
malus_domestica MD08G1016600.v1.1 MD08G1016900.v1.1 MD08G1017000.v1.1 MD08G1082100.v1.1 MD13G1087700.v1.1 MD14G1007900.v1.1 MD15G1015700.v1.1 MD15G1015800.v1.1 MD15G1015900.v1.1 MD15G1016000.v1.1 MD15G1068600.v1.1 MD15G1068700.v1.1
prunus_persica Prupe.1G369700_v2.0.a1 Prupe.1G369800_v2.0.a1
pyrus_communis pycom08g01440 pycom08g01450 pycom08g01480 pycom15g01350
rosa_chinensis RchiOBHm_Chr4g0408881 RchiOBHm_Chr6g0263281 RchiOBHm_Chr6g0263301 RchiOBHm_Chr6g0263331 RchiOBHm_Chr6g0302251 RchiOBHm_Chr6g0302271 RchiOBHm_Chr6g0302321 RchiOBHm_Chr6g0302331
rosa_laevigata RLG00000008616 RLG00000011177 RLG00000011178 RLG00000011182 RLG00000014357 RLG00000014362 RLG00000014363 RLG00000014365 RLG00000018749
rosa_multiflora Rmu_co8182314.1_g000001 Rmu_co8224130.1_g000001 Rmu_co8328361.1_g000001 Rmu_co8367879.1_g000001 Rmu_sc0000310.1_g000016 Rmu_sc0000310.1_g000033 Rmu_sc0001855.1_g000020 Rmu_sc0002778.1_g000005 Rmu_sc0003089.1_g000001 Rmu_sc0003089.1_g000012 Rmu_sc0003089.1_g000021 Rmu_sc0003633.1_g000013 Rmu_sc0003633.1_g000022
rosa_roxburghii Rroxscaffold_176G00431040 Rroxscaffold_5G00353250 Rroxscaffold_7G00165850 Rroxscaffold_7G00165920 Rroxscaffold_7G00165930 Rroxscaffold_7G00204510 Rroxscaffold_7G00204560
rosa_rugosa Rorug02G0245300 Rorug04G0088500 Rorug06G0004200 Rorug06G0004300 Rorug06G0313500 Rorug06G0313600 Rorug06G0313700
rosa_samantha Rh4CG160500 Rh6AG123400 Rh6AG123700 Rh6AG124000 Rh6AG426200 Rh6AG426400 Rh6AG426600 Rh7CG259000
rosa_wichuraiana Rw4G012520 Rw6G010610 Rw6G010620 Rw6G010640 Rw6G010780 Rw6G036900 Rw6G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 373
AccB1I GGYRCC 2 cut(s) 1043, 1055
AccI GTMKAC 2 cut(s) 261, 1324
AccII CGCG 2 cut(s) 165, 1061
AccIII TCCGGA 1 cut(s) 1580
AclI AACGTT 2 cut(s) 666, 1026
AclWI GGATC 3 cut(s) 358, 419, 941
AcoI YGGCCR 1 cut(s) 279
AcsI RAATTY 1 cut(s) 1641
AcvI CACGTG 1 cut(s) 336
AcyI GRCGYC 4 cut(s) 222, 296, 370, 1553
AdeI CACNNNGTG 1 cut(s) 339
AfaI GTAC 9 cut(s) 287, 326, 485, 746, 1089, 1156, 1172, 1188, 1209
AfiI CCNNNNNNNGG 3 cut(s) 788, 1562, 1625
AflIII ACRYGT 1 cut(s) 333
AgsI TTSAA 5 cut(s) 394, 547, 822, 919, 1531
AhdI GACNNNNNGTC 4 cut(s) 295, 374, 772, 1426
AjiI CACGTC 1 cut(s) 292
AluBI AGCT 7 cut(s) 106, 148, 704, 842, 866, 986, 1381
AluI AGCT 7 cut(s) 106, 148, 704, 842, 866, 986, 1381
Alw21I GWGCWC 3 cut(s) 344, 788, 868
Alw26I GTCTC 3 cut(s) 38, 605, 759
AlwI GGATC 3 cut(s) 358, 419, 941
Ama87I CYCGRG 2 cut(s) 346, 769
Aor13HI TCCGGA 1 cut(s) 1580
AoxI GGCC 1 cut(s) 279
ApeKI GCWGC 4 cut(s) 106, 145, 538, 839
ApoI RAATTY 1 cut(s) 1641
ArsI GACNNNNNNTTYG 2 cut(s) 1298, 1330
AspLEI GCGC 2 cut(s) 253, 929
AspS9I GGNCC 1 cut(s) 376
AsuC2I CCSGG 2 cut(s) 759, 1097
AsuHPI GGTGA 2 cut(s) 1010, 1335
AsuNHI GCTAGC 1 cut(s) 1381
AvaI CYCGRG 2 cut(s) 346, 769
AvaII GGWCC 1 cut(s) 376
BaeGI GKGCMC 1 cut(s) 20
BaeI ACNNNNGTAYC 4 cut(s) 1138, 1154, 1171, 1187
BanI GGYRCC 2 cut(s) 1043, 1055
BanII GRGCYC 1 cut(s) 868
BauI CACGAG 1 cut(s) 320
BbrPI CACGTG 1 cut(s) 336
BbsI GAAGAC 3 cut(s) 746, 926, 978
Bbv12I GWGCWC 3 cut(s) 344, 788, 868
BbvCI CCTCAGC 1 cut(s) 843
BbvI GCAGC 4 cut(s) 93, 157, 550, 851
BccI CCATC 6 cut(s) 474, 503, 614, 1193, 1343, 1432
BceAI ACGGC 5 cut(s) 235, 264, 285, 530, 688
BcgI CGANNNNNNTGC 6 cut(s) 172, 206, 704, 738, 1404, 1438
BciVI GTATCC 1 cut(s) 789
BcnI CCSGG 2 cut(s) 759, 1097
BcoDI GTCTC 3 cut(s) 38, 605, 759
BfaI CTAG 7 cut(s) 983, 987, 1052, 1152, 1382, 1418, 1487
BfmI CTRYAG 1 cut(s) 1182
BfoI RGCGCY 1 cut(s) 254
BfuI GTATCC 1 cut(s) 789
BisI GCNGC 9 cut(s) 87, 94, 107, 146, 229, 539, 726, 840, 1059
BlsI GCNGC 9 cut(s) 88, 95, 108, 147, 230, 540, 727, 841, 1060
BmcAI AGTACT 1 cut(s) 1188
Bme1390I CCNGG 2 cut(s) 759, 1097
Bme18I GGWCC 1 cut(s) 376
BmeRI GACNNNNNGTC 4 cut(s) 295, 374, 772, 1426
BmeT110I CYCGRG 2 cut(s) 346, 769
BmgBI CACGTC 1 cut(s) 292
BmgT120I GGNCC 1 cut(s) 376
BmiI GGNNCC 2 cut(s) 1045, 1057
BmrFI CCNGG 2 cut(s) 759, 1097
BmrI ACTGGG 1 cut(s) 1529
BmtI GCTAGC 1 cut(s) 1385
BmuI ACTGGG 1 cut(s) 1529
BpiI GAAGAC 3 cut(s) 746, 926, 978
Bpu10I CCTNAGC 1 cut(s) 843
BpuEI CTTGAG 1 cut(s) 797
BpuMI CCSGG 2 cut(s) 759, 1097
BsaAI YACGTR 3 cut(s) 336, 1166, 1196
BsaBI GATNNNNATC 1 cut(s) 524
BsaHI GRCGYC 4 cut(s) 222, 296, 370, 1553
BsaI GGTCTC 1 cut(s) 759
BsaJI CCNNGG 4 cut(s) 345, 770, 1059, 1346
BsaWI WCCGGW 4 cut(s) 474, 1084, 1562, 1580
Bsc4I CCNNNNNNNGG 3 cut(s) 788, 1562, 1625
Bse118I RCCGGY 2 cut(s) 89, 1555
Bse1I ACTGG 3 cut(s) 449, 793, 1524
Bse8I GATNNNNATC 1 cut(s) 524
BseAI TCCGGA 1 cut(s) 1580
BseDI CCNNGG 4 cut(s) 345, 770, 1059, 1346
BseJI GATNNNNATC 1 cut(s) 524
BseLI CCNNNNNNNGG 3 cut(s) 788, 1562, 1625
BseMII CTCAG 3 cut(s) 600, 604, 834
BseNI ACTGG 3 cut(s) 449, 793, 1524
BseRI GAGGAG 1 cut(s) 334
BseSI GKGCMC 1 cut(s) 20
BseX3I CGGCCG 1 cut(s) 279
BseXI GCAGC 4 cut(s) 93, 157, 550, 851
BsgI GTGCAG 1 cut(s) 250
Bsh1236I CGCG 2 cut(s) 165, 1061
Bsh1285I CGRYCG 4 cut(s) 163, 181, 282, 1125
BshFI GGCC 1 cut(s) 281
BshNI GGYRCC 2 cut(s) 1043, 1055
BsiEI CGRYCG 4 cut(s) 163, 181, 282, 1125
BsiHKAI GWGCWC 3 cut(s) 344, 788, 868
BsiHKCI CYCGRG 2 cut(s) 346, 769
BsiSI CCGG 9 cut(s) 90, 475, 759, 1047, 1085, 1097, 1556, 1563, 1581
BslFI GGGAC 1 cut(s) 297
BslI CCNNNNNNNGG 3 cut(s) 788, 1562, 1625
BsmAI GTCTC 3 cut(s) 38, 605, 759
BsmBI CGTCTC 1 cut(s) 38
BsmFI GGGAC 1 cut(s) 297
BsmI GAATGC 1 cut(s) 1286
BsnI GGCC 1 cut(s) 281
Bso31I GGTCTC 1 cut(s) 759
BsoBI CYCGRG 2 cut(s) 346, 769
Bsp1286I GDGCHC 4 cut(s) 20, 344, 788, 868
Bsp13I TCCGGA 1 cut(s) 1580
Bsp143I GATC 4 cut(s) 350, 424, 453, 933
BspANI GGCC 1 cut(s) 281
BspCNI CTCAG 3 cut(s) 601, 603, 835
BspEI TCCGGA 1 cut(s) 1580
BspFNI CGCG 2 cut(s) 165, 1061
BspLI GGNNCC 2 cut(s) 1045, 1057
BspMAI CTGCAG 1 cut(s) 1186
BspOI GCTAGC 1 cut(s) 1385
BspPI GGATC 3 cut(s) 358, 419, 941
BspT107I GGYRCC 2 cut(s) 1043, 1055
BspTNI GGTCTC 1 cut(s) 759
BsrFI RCCGGY 2 cut(s) 89, 1555
BsrI ACTGG 3 cut(s) 449, 793, 1524
BssAI RCCGGY 2 cut(s) 89, 1555
BssECI CCNNGG 4 cut(s) 345, 770, 1059, 1346
BssMI GATC 4 cut(s) 350, 424, 453, 933
BssNAI GTATAC 1 cut(s) 1325
BssNI GRCGYC 4 cut(s) 222, 296, 370, 1553
BssSI CACGAG 1 cut(s) 320
Bst1107I GTATAC 1 cut(s) 1325
Bst2BI CACGAG 1 cut(s) 320
Bst4CI ACNGT 3 cut(s) 1022, 1043, 1134
Bst6I CTCTTC 2 cut(s) 56, 74
BstACI GRCGYC 4 cut(s) 222, 296, 370, 1553
BstBAI YACGTR 3 cut(s) 336, 1166, 1196
BstC8I GCNNGC 5 cut(s) 91, 490, 1383, 1557, 1627
BstDEI CTNAG 4 cut(s) 590, 609, 843, 1279
BstDSI CCRYGG 1 cut(s) 1059
BstFNI CGCG 2 cut(s) 165, 1061
BstH2I RGCGCY 1 cut(s) 254
BstHHI GCGC 2 cut(s) 253, 929
BstKTI GATC 4 cut(s) 353, 427, 456, 936
BstMAI GTCTC 3 cut(s) 38, 605, 759
BstMBI GATC 4 cut(s) 350, 424, 453, 933
BstMCI CGRYCG 4 cut(s) 163, 181, 282, 1125
BstMWI GCNNNNNNNGC 5 cut(s) 145, 228, 278, 839, 1283
BstNSI RCATGY 3 cut(s) 145, 927, 979
BstSCI CCNGG 2 cut(s) 757, 1095
BstSFI CTRYAG 1 cut(s) 1182
BstSLI GKGCMC 1 cut(s) 20
BstUI CGCG 2 cut(s) 165, 1061
BstV1I GCAGC 4 cut(s) 93, 157, 550, 851
BstV2I GAAGAC 3 cut(s) 746, 926, 978
BstZ17I GTATAC 1 cut(s) 1325
BstZI CGGCCG 1 cut(s) 279
BsuI GTATCC 1 cut(s) 789
BsuRI GGCC 1 cut(s) 281
BtgI CCRYGG 1 cut(s) 1059
BtrI CACGTC 1 cut(s) 292
BtsI GCAGTG 1 cut(s) 965
BtsIMutI CAGTG 3 cut(s) 786, 965, 1517
Cac8I GCNNGC 5 cut(s) 91, 490, 1383, 1557, 1627
CfoI GCGC 2 cut(s) 253, 929
Cfr10I RCCGGY 2 cut(s) 89, 1555
Cfr13I GGNCC 1 cut(s) 376
Cfr42I CCGCGG 1 cut(s) 1062
CseI GACGC 5 cut(s) 109, 154, 211, 285, 1561
Csp6I GTAC 9 cut(s) 286, 325, 484, 745, 1088, 1155, 1171, 1187, 1208
CviAII CATG 7 cut(s) 136, 142, 172, 924, 976, 994, 1003
CviQI GTAC 9 cut(s) 286, 325, 484, 745, 1088, 1155, 1171, 1187, 1208
DdeI CTNAG 4 cut(s) 590, 609, 843, 1279
DpnI GATC 4 cut(s) 352, 426, 455, 935
DpnII GATC 4 cut(s) 350, 424, 453, 933
DraIII CACNNNGTG 1 cut(s) 339
DriI GACNNNNNGTC 4 cut(s) 295, 374, 772, 1426
EaeI YGGCCR 1 cut(s) 279
EagI CGGCCG 1 cut(s) 279
Eam1104I CTCTTC 2 cut(s) 56, 74
Eam1105I GACNNNNNGTC 4 cut(s) 295, 374, 772, 1426
EarI CTCTTC 2 cut(s) 56, 74
EciI GGCGGA 2 cut(s) 546, 1093
Ecl136II GAGCTC 1 cut(s) 866
EclXI CGGCCG 1 cut(s) 279
Eco24I GRGCYC 1 cut(s) 868
Eco31I GGTCTC 1 cut(s) 759
Eco47I GGWCC 1 cut(s) 376
Eco52I CGGCCG 1 cut(s) 279
Eco53kI GAGCTC 1 cut(s) 866
Eco72I CACGTG 1 cut(s) 336
Eco88I CYCGRG 2 cut(s) 346, 769
EcoICRI GAGCTC 1 cut(s) 866
EcoT38I GRGCYC 1 cut(s) 868
Esp3I CGTCTC 1 cut(s) 38
FaeI CATG 7 cut(s) 139, 145, 175, 927, 979, 997, 1006
FalI AAGNNNNNCTT 2 cut(s) 886, 918
FaqI GGGAC 1 cut(s) 297
FatI CATG 7 cut(s) 135, 141, 171, 923, 975, 993, 1002
FauI CCCGC 3 cut(s) 963, 1054, 1618
FblI GTMKAC 2 cut(s) 261, 1324
Fnu4HI GCNGC 9 cut(s) 87, 94, 107, 146, 229, 539, 726, 840, 1059
FriOI GRGCYC 1 cut(s) 868
Fsp4HI GCNGC 9 cut(s) 87, 94, 107, 146, 229, 539, 726, 840, 1059
FspBI CTAG 7 cut(s) 983, 987, 1052, 1152, 1382, 1418, 1487
GlaI GCGC 2 cut(s) 252, 928
GluI GCNGC 9 cut(s) 87, 94, 107, 146, 229, 539, 726, 840, 1059
HaeII RGCGCY 1 cut(s) 254
HaeIII GGCC 1 cut(s) 281
HapII CCGG 9 cut(s) 90, 475, 759, 1047, 1085, 1097, 1556, 1563, 1581
HgaI GACGC 5 cut(s) 109, 154, 211, 285, 1561
HhaI GCGC 2 cut(s) 253, 929
Hin1I GRCGYC 4 cut(s) 222, 296, 370, 1553
Hin1II CATG 7 cut(s) 139, 145, 175, 927, 979, 997, 1006
Hin6I GCGC 2 cut(s) 251, 927
HinP1I GCGC 2 cut(s) 251, 927
HincII GTYRAC 4 cut(s) 262, 472, 670, 1513
HindII GTYRAC 4 cut(s) 262, 472, 670, 1513
HinfI GANTC 5 cut(s) 990, 1081, 1307, 1421, 1615
HpaI GTTAAC 1 cut(s) 1513
HpaII CCGG 9 cut(s) 90, 475, 759, 1047, 1085, 1097, 1556, 1563, 1581
HphI GGTGA 2 cut(s) 1010, 1335
Hpy166II GTNNAC 8 cut(s) 262, 325, 358, 472, 670, 1105, 1325, 1513
Hpy188I TCNGA 6 cut(s) 114, 194, 331, 783, 933, 1504
Hpy188III TCNNGA 6 cut(s) 348, 379, 736, 814, 1471, 1581
Hpy8I GTNNAC 8 cut(s) 262, 325, 358, 472, 670, 1105, 1325, 1513
Hpy99I CGWCG 4 cut(s) 125, 293, 401, 1555
HpyAV CCTTC 7 cut(s) 161, 221, 402, 566, 1197, 1458, 1501
HpyCH4III ACNGT 3 cut(s) 1022, 1043, 1134
HpyCH4V TGCA 4 cut(s) 139, 145, 267, 1184
HpyF10VI GCNNNNNNNGC 5 cut(s) 145, 228, 278, 839, 1283
HpyF3I CTNAG 4 cut(s) 590, 609, 843, 1279
Hsp92I GRCGYC 4 cut(s) 222, 296, 370, 1553
Hsp92II CATG 7 cut(s) 139, 145, 175, 927, 979, 997, 1006
HspAI GCGC 2 cut(s) 251, 927
Kpn2I TCCGGA 1 cut(s) 1580
KroI GCCGGC 2 cut(s) 89, 1555
KroNI GCCGGC 2 cut(s) 91, 1557
KspAI GTTAAC 1 cut(s) 1513
KspI CCGCGG 1 cut(s) 1062
Kzo9I GATC 4 cut(s) 350, 424, 453, 933
LmnI GCTCC 6 cut(s) 103, 153, 347, 863, 871, 1579
Lsp1109I GCAGC 4 cut(s) 93, 157, 550, 851
MaeI CTAG 7 cut(s) 983, 987, 1052, 1152, 1382, 1418, 1487
MalI GATC 4 cut(s) 352, 426, 455, 935
MboI GATC 4 cut(s) 350, 424, 453, 933
MboII GAAGA 6 cut(s) 22, 43, 61, 751, 931, 983
MhlI GDGCHC 4 cut(s) 20, 344, 788, 868
MluCI AATT 4 cut(s) 1032, 1297, 1313, 1641
MlyI GAGTC 3 cut(s) 999, 1301, 1415
MmeI TCCRAC 3 cut(s) 225, 1047, 1195
MreI CGCCGGCG 1 cut(s) 89
MroI TCCGGA 1 cut(s) 1580
MroNI GCCGGC 2 cut(s) 89, 1555
MseI TTAA 4 cut(s) 255, 885, 1359, 1512
MslI CAYNNNNRTG 1 cut(s) 140
MspA1I CMGCKG 3 cut(s) 797, 842, 1061
MspI CCGG 9 cut(s) 90, 475, 759, 1047, 1085, 1097, 1556, 1563, 1581
MspR9I CCNGG 2 cut(s) 759, 1097
Mva1269I GAATGC 1 cut(s) 1286
MvnI CGCG 2 cut(s) 165, 1061
MwoI GCNNNNNNNGC 5 cut(s) 145, 228, 278, 839, 1283
NaeI GCCGGC 2 cut(s) 91, 1557
NciI CCSGG 2 cut(s) 759, 1097
NdeII GATC 4 cut(s) 350, 424, 453, 933
NgoMIV GCCGGC 2 cut(s) 89, 1555
NheI GCTAGC 1 cut(s) 1381
NlaIII CATG 7 cut(s) 139, 145, 175, 927, 979, 997, 1006
NlaIV GGNNCC 2 cut(s) 1045, 1057
NmeAIII GCCGAG 2 cut(s) 257, 307
NmuCI GTSAC 4 cut(s) 440, 998, 1128, 1350
NspI RCATGY 3 cut(s) 145, 927, 979
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PctI GAATGC 1 cut(s) 1286
PdiI GCCGGC 2 cut(s) 91, 1557
PfeI GAWTC 2 cut(s) 1081, 1615
PflFI GACNNNGTC 1 cut(s) 164
PkrI GCNGC 9 cut(s) 88, 95, 108, 147, 230, 540, 727, 841, 1060
PleI GAGTC 3 cut(s) 998, 1301, 1415
PmaCI CACGTG 1 cut(s) 336
PmlI CACGTG 1 cut(s) 336
PpsI GAGTC 3 cut(s) 998, 1301, 1415
Ppu21I YACGTR 3 cut(s) 336, 1166, 1196
Psp124BI GAGCTC 1 cut(s) 868
Psp1406I AACGTT 2 cut(s) 666, 1026
PspCI CACGTG 1 cut(s) 336
PspN4I GGNNCC 2 cut(s) 1045, 1057
PspPI GGNCC 1 cut(s) 376
PsrI GAACNNNNNNTAC 2 cut(s) 1587, 1619
PstI CTGCAG 1 cut(s) 1186
PsyI GACNNNGTC 1 cut(s) 164
PvuII CAGCTG 1 cut(s) 842
RsaI GTAC 9 cut(s) 287, 326, 485, 746, 1089, 1156, 1172, 1188, 1209
RsaNI GTAC 9 cut(s) 286, 325, 484, 745, 1088, 1155, 1171, 1187, 1208
RseI CAYNNNNRTG 1 cut(s) 140
SacI GAGCTC 1 cut(s) 868
SacII CCGCGG 1 cut(s) 1062
SalI GTCGAC 1 cut(s) 260
SaqAI TTAA 4 cut(s) 255, 885, 1359, 1512
SatI GCNGC 9 cut(s) 87, 94, 107, 146, 229, 539, 726, 840, 1059
Sau3AI GATC 4 cut(s) 350, 424, 453, 933
Sau96I GGNCC 1 cut(s) 376
ScaI AGTACT 1 cut(s) 1188
SchI GAGTC 3 cut(s) 999, 1301, 1415
ScrFI CCNGG 2 cut(s) 759, 1097
SduI GDGCHC 4 cut(s) 20, 344, 788, 868
SfcI CTRYAG 1 cut(s) 1182
Sfr303I CCGCGG 1 cut(s) 1062
SgrAI CRCCGGYG 1 cut(s) 89
SgrBI CCGCGG 1 cut(s) 1062
SinI GGWCC 1 cut(s) 376
SmiMI CAYNNNNRTG 1 cut(s) 140
SmlI CTYRAG 1 cut(s) 812
SmoI CTYRAG 1 cut(s) 812
Sse9I AATT 4 cut(s) 1032, 1297, 1313, 1641
SspMI CTAG 7 cut(s) 983, 987, 1052, 1152, 1382, 1418, 1487
SstI GAGCTC 1 cut(s) 868
StyD4I CCNGG 2 cut(s) 757, 1095
TaaI ACNGT 3 cut(s) 1022, 1043, 1134
TaqI TCGA 9 cut(s) 177, 261, 456, 714, 1137, 1390, 1397, 1472, 1537
TaqII GACCGA 1 cut(s) 1338
TasI AATT 4 cut(s) 1032, 1297, 1313, 1641
TatI WGTACW 2 cut(s) 324, 1186
TauI GCSGC 5 cut(s) 89, 96, 231, 728, 1061
TfiI GAWTC 2 cut(s) 1081, 1615
Tru1I TTAA 4 cut(s) 255, 885, 1359, 1512
Tru9I TTAA 4 cut(s) 255, 885, 1359, 1512
TscAI CASTG 3 cut(s) 793, 965, 1524
TseFI GTSAC 4 cut(s) 440, 998, 1128, 1350
TseI GCWGC 4 cut(s) 106, 145, 538, 839
Tsp45I GTSAC 4 cut(s) 440, 998, 1128, 1350
TspDTI ATGAA 9 cut(s) 17, 23, 33, 43, 596, 673, 1440, 1490, 1595
TspGWI ACGGA 5 cut(s) 299, 414, 417, 1420, 1566
TspRI CASTG 3 cut(s) 793, 965, 1524
Tth111I GACNNNGTC 1 cut(s) 164
VpaK11BI GGWCC 1 cut(s) 376
XapI RAATTY 1 cut(s) 1641
XceI RCATGY 3 cut(s) 145, 927, 979
XcmI CCANNNNNNNNNTGG 2 cut(s) 370, 957
XmiI GTMKAC 2 cut(s) 261, 1324
XspI CTAG 7 cut(s) 983, 987, 1052, 1152, 1382, 1418, 1487
ZraI GACGTC 1 cut(s) 371
ZrmI AGTACT 1 cut(s) 1188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.