RchiOBHm_Chr4g0408881

Galactose oxidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000556
Physical Location & Seq
Forward (+)
31805685 .. 31807557
1873 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37995

Sequence Viewer

Length: 1641 bp
ATGAAGACATGCCCAACTCCCCATCTCATTCTCTCATTCCTGTTCATATGCACTTTTTTCTTCTCCCTGACCCACGCCGCCGGCGGCAAATGGCAGCTGCTTGTGAAAAGCGTCGGCATTTCGGCCATGCACATGCAGCTCCTCCACAACGACCGTGTCGTCATGTTCGACCGCACCGACTTCGGAAAATCCAACCTCCCCCTCCCCAACGGCGTCTGCCGCAACAACCCCCACGATACGGCGCTTAAAGTCGACTGCACGGCCCACTCCGCCGAGTACGACGTGGCGTCCAACAAAGTCCGTCCTCTGTTTGTGTACTCCGACGTGTGGTGCTCCTCGGGGTCAGTAAACCCCAGCGGAAGTCTAGTCCAGACGGGAGGTTTCAACGACGGAGACAGAAGAGTGCGGGTTTTTGATCCGTGTCCTACTTGTGACTGGAAAGAGATTGAGTTCGGGTTAGTCAACCGGAGATGGTACGCCACCAATCATATTCTTCCAGATGGACGCCAGATAATCATCGGCGGACGGCGGCAGTTCAACTACGAGTTTTACCCCAAAAGTGGAGGCTCAATGAACGCGCACAGTTTACCTTTTCTTGTTGAGACAAGTGACGGCGACGCCATAGAGAATAATCTCTACCCTTTTGTCTTTCTCAACCTTGACGGCAATCTTTTTATCTTTGCCAACAATAGAGCTATATTGTACGACTATGTTGCTGGTAAAATAGTGAAGACGTACCCCACAATACCCGGTGGAGACCCGAGGTCGTATCCGAGCACTGGTTCAGCGGTGTTGCTACCTCTCAAGACTTCTAAAGGTCAGGTTGTGGCAGCTGAGGTTCTGGTTTGCGGTGGAGCTCCCAAAGGCTCTTATGTTAAGGCCGAAAGTGGGACTTTCGTGCCAGCATTGAAGACATGCGCTCGGATCATGATAACCGACCCGAACCCGCAATGGGTTGTGGAAAACATGCCTCTAGCCAGAGTCATGGGTGACATGACGTTACTAGCCAACGGTGACGTTTTAATTATCAACGGTGCCGGATCAGGTACCGCGGGGTGGCAGCTCGGGCGGAACCCGGTACTGAACCCGGTTGTTTACAAGCCCGATAATGCGGTCGGGTCACGGTTCAAGAAACAAAATCCGAGCACCATACCACGCATGTACCACTCCACTGCAATACTGCTACGTGATGGAAGGGTACTTGTTGGAGGTAGTAACCCTCATATTCGTTACGAGTTCTCAAACGTGCTTTTCCCAACCGAACTTGCTCTAGAAGCATTCTCCCCTAATTACTTGGACTCGCAATTTGCAAGTATACGTCCGACCATCTATTCGCCTCAGTCCCAAATTACGGTTGGTTATGGACAGAAGCTAGCCGTTCGATTTTCGATAACGGGGAGAATACAACTGAACTCGGTGTCTGTTACGATGGTGTCACCTTCATTTACTACGCATTCGTTCTCGATGAACCAGAGACTAGTGGTTCTTGCTTCCGAGAATGTTAGAGCAGTGGGGAACCTGATGTTTGAAGTTCAGGTAACGACGCCGGCTTCCGGTAATCTTGCACCGTCCGGATATTATCTTGTATATGTGGTTCATCAGCAGATTCCAAGTAAGGGTATTTGGGTCAAGATTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

546

Amino Acids

59.93

Weight (kDa)

9.13

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 43 - 431 1.1e-184 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 440 - 545 4.3e-27 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000556)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19900 AT1G75620
fragaria_vesca FvH4_2g08320 FvH4_2g08340 FvH4_2g39130 FvH4_2g39150
malus_domestica MD08G1016600.v1.1 MD08G1016900.v1.1 MD08G1017000.v1.1 MD08G1082100.v1.1 MD13G1087700.v1.1 MD14G1007900.v1.1 MD15G1015700.v1.1 MD15G1015800.v1.1 MD15G1015900.v1.1 MD15G1016000.v1.1 MD15G1068600.v1.1 MD15G1068700.v1.1
prunus_persica Prupe.1G369700_v2.0.a1 Prupe.1G369800_v2.0.a1
pyrus_communis pycom08g01440 pycom08g01450 pycom08g01480 pycom15g01350
rosa_chinensis RchiOBHm_Chr4g0408881 RchiOBHm_Chr6g0263281 RchiOBHm_Chr6g0263301 RchiOBHm_Chr6g0263331 RchiOBHm_Chr6g0302251 RchiOBHm_Chr6g0302271 RchiOBHm_Chr6g0302321 RchiOBHm_Chr6g0302331
rosa_laevigata RLG00000008616 RLG00000011177 RLG00000011178 RLG00000011182 RLG00000014357 RLG00000014362 RLG00000014363 RLG00000014365 RLG00000018749
rosa_multiflora Rmu_co8182314.1_g000001 Rmu_co8224130.1_g000001 Rmu_co8328361.1_g000001 Rmu_co8367879.1_g000001 Rmu_sc0000310.1_g000016 Rmu_sc0000310.1_g000033 Rmu_sc0001855.1_g000020 Rmu_sc0002778.1_g000005 Rmu_sc0003089.1_g000001 Rmu_sc0003089.1_g000012 Rmu_sc0003089.1_g000021 Rmu_sc0003633.1_g000013 Rmu_sc0003633.1_g000022
rosa_roxburghii Rroxscaffold_176G00431040 Rroxscaffold_5G00353250 Rroxscaffold_7G00165850 Rroxscaffold_7G00165920 Rroxscaffold_7G00165930 Rroxscaffold_7G00204510 Rroxscaffold_7G00204560
rosa_rugosa Rorug02G0245300 Rorug04G0088500 Rorug06G0004200 Rorug06G0004300 Rorug06G0313500 Rorug06G0313600 Rorug06G0313700
rosa_samantha Rh4CG160500 Rh6AG123400 Rh6AG123700 Rh6AG124000 Rh6AG426200 Rh6AG426400 Rh6AG426600 Rh7CG259000
rosa_wichuraiana Rw4G012520 Rw6G010610 Rw6G010620 Rw6G010640 Rw6G010780 Rw6G036900 Rw6G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 158
Acc65I GGTACC 1 cut(s) 1046
AccB1I GGYRCC 2 cut(s) 1034, 1046
AccI GTMKAC 2 cut(s) 252, 1315
AccII CGCG 2 cut(s) 578, 1052
AccIII TCCGGA 1 cut(s) 1571
AclWI GGATC 3 cut(s) 410, 932, 1048
AcoI YGGCCR 1 cut(s) 123
AcyI GRCGYC 5 cut(s) 213, 287, 505, 618, 1544
AfaI GTAC 9 cut(s) 278, 317, 476, 704, 737, 1048, 1080, 1163, 1200
AflIII ACRYGT 1 cut(s) 324
AgsI TTSAA 5 cut(s) 385, 538, 910, 1129, 1529
AhdI GACNNNNNGTC 2 cut(s) 286, 763
AhlI ACTAGT 1 cut(s) 1477
AjiI CACGTC 2 cut(s) 283, 325
AluBI AGCT 7 cut(s) 97, 139, 695, 833, 857, 1063, 1372
AluI AGCT 7 cut(s) 97, 139, 695, 833, 857, 1063, 1372
Alw21I GWGCWC 4 cut(s) 335, 779, 859, 1148
Alw26I GTCTC 4 cut(s) 387, 596, 750, 1468
AlwI GGATC 3 cut(s) 410, 932, 1048
Ama87I CYCGRG 3 cut(s) 337, 760, 1064
Aor13HI TCCGGA 1 cut(s) 1571
AoxI GGCC 3 cut(s) 123, 261, 879
ApeKI GCWGC 5 cut(s) 94, 97, 136, 830, 1060
ArsI GACNNNNNNTTYG 4 cut(s) 1289, 1315, 1321, 1347
Asp718I GGTACC 1 cut(s) 1046
AspLEI GCGC 3 cut(s) 244, 580, 920
AspS9I GGNCC 1 cut(s) 262
AsuC2I CCSGG 3 cut(s) 750, 1076, 1088
AsuHPI GGTGA 3 cut(s) 1001, 1025, 1428
AsuNHI GCTAGC 1 cut(s) 1372
AvaI CYCGRG 3 cut(s) 337, 760, 1064
BaeI ACNNNNGTAYC 2 cut(s) 1145, 1178
BanI GGYRCC 2 cut(s) 1034, 1046
BanII GRGCYC 1 cut(s) 859
BbsI GAAGAC 3 cut(s) 11, 737, 917
Bbv12I GWGCWC 4 cut(s) 335, 779, 859, 1148
BbvCI CCTCAGC 1 cut(s) 834
BbvI GCAGC 5 cut(s) 84, 106, 148, 842, 1072
BccI CCATC 6 cut(s) 30, 465, 494, 1184, 1334, 1423
BceAI ACGGC 7 cut(s) 226, 255, 276, 542, 628, 679, 1361
BcgI CGANNNNNNTGC 4 cut(s) 163, 197, 695, 729
BciVI GTATCC 1 cut(s) 780
BcnI CCSGG 3 cut(s) 750, 1076, 1088
BcoDI GTCTC 4 cut(s) 387, 596, 750, 1468
BcuI ACTAGT 1 cut(s) 1477
BfaI CTAG 6 cut(s) 365, 974, 1004, 1271, 1373, 1478
BfoI RGCGCY 1 cut(s) 245
BfuI GTATCC 1 cut(s) 780
BisI GCNGC 9 cut(s) 78, 85, 95, 98, 137, 220, 530, 831, 1061
BlsI GCNGC 9 cut(s) 79, 86, 96, 99, 138, 221, 531, 832, 1062
Bme1390I CCNGG 3 cut(s) 750, 1076, 1088
BmeRI GACNNNNNGTC 2 cut(s) 286, 763
BmeT110I CYCGRG 3 cut(s) 337, 760, 1064
BmgBI CACGTC 2 cut(s) 283, 325
BmgT120I GGNCC 1 cut(s) 262
BmiI GGNNCC 4 cut(s) 1036, 1048, 1073, 1517
BmrFI CCNGG 3 cut(s) 750, 1076, 1088
BmtI GCTAGC 1 cut(s) 1376
BpiI GAAGAC 3 cut(s) 11, 737, 917
Bpu10I CCTNAGC 1 cut(s) 834
BpuEI CTTGAG 1 cut(s) 788
BpuMI CCSGG 3 cut(s) 750, 1076, 1088
BsaAI YACGTR 1 cut(s) 1187
BsaBI GATNNNNATC 1 cut(s) 515
BsaHI GRCGYC 5 cut(s) 213, 287, 505, 618, 1544
BsaI GGTCTC 1 cut(s) 750
BsaJI CCNNGG 3 cut(s) 336, 761, 1050
BsaWI WCCGGW 3 cut(s) 465, 1553, 1571
Bse118I RCCGGY 2 cut(s) 80, 1546
Bse1I ACTGG 2 cut(s) 440, 784
Bse3DI GCAATG 1 cut(s) 956
Bse8I GATNNNNATC 1 cut(s) 515
BseAI TCCGGA 1 cut(s) 1571
BseDI CCNNGG 3 cut(s) 336, 761, 1050
BseJI GATNNNNATC 1 cut(s) 515
BseMI GCAATG 1 cut(s) 956
BseMII CTCAG 2 cut(s) 825, 1352
BseNI ACTGG 2 cut(s) 440, 784
BseRI GAGGAG 2 cut(s) 131, 325
BseXI GCAGC 5 cut(s) 84, 106, 148, 842, 1072
BseYI CCCAGC 1 cut(s) 353
BsgI GTGCAG 1 cut(s) 241
Bsh1236I CGCG 2 cut(s) 578, 1052
Bsh1285I CGRYCG 3 cut(s) 154, 172, 1116
BshFI GGCC 3 cut(s) 125, 263, 881
BshNI GGYRCC 2 cut(s) 1034, 1046
BsiEI CGRYCG 3 cut(s) 154, 172, 1116
BsiHKAI GWGCWC 4 cut(s) 335, 779, 859, 1148
BsiHKCI CYCGRG 3 cut(s) 337, 760, 1064
BsiSI CCGG 9 cut(s) 81, 466, 750, 1038, 1076, 1088, 1547, 1554, 1572
BslFI GGGAC 2 cut(s) 904, 1327
BsmAI GTCTC 4 cut(s) 387, 596, 750, 1468
BsmFI GGGAC 2 cut(s) 904, 1327
BsmI GAATGC 2 cut(s) 1277, 1453
BsnI GGCC 3 cut(s) 125, 263, 881
Bso31I GGTCTC 1 cut(s) 750
BsoBI CYCGRG 3 cut(s) 337, 760, 1064
Bsp1286I GDGCHC 4 cut(s) 335, 779, 859, 1148
Bsp13I TCCGGA 1 cut(s) 1571
Bsp143I GATC 3 cut(s) 415, 924, 1040
BspANI GGCC 3 cut(s) 125, 263, 881
BspCNI CTCAG 2 cut(s) 826, 1351
BspEI TCCGGA 1 cut(s) 1571
BspFNI CGCG 2 cut(s) 578, 1052
BspHI TCATGA 1 cut(s) 927
BspLI GGNNCC 4 cut(s) 1036, 1048, 1073, 1517
BspOI GCTAGC 1 cut(s) 1376
BspPI GGATC 3 cut(s) 410, 932, 1048
BspT107I GGYRCC 2 cut(s) 1034, 1046
BspTNI GGTCTC 1 cut(s) 750
BsrDI GCAATG 1 cut(s) 956
BsrFI RCCGGY 2 cut(s) 80, 1546
BsrI ACTGG 2 cut(s) 440, 784
BssAI RCCGGY 2 cut(s) 80, 1546
BssECI CCNNGG 3 cut(s) 336, 761, 1050
BssMI GATC 3 cut(s) 415, 924, 1040
BssNAI GTATAC 1 cut(s) 1316
BssNI GRCGYC 5 cut(s) 213, 287, 505, 618, 1544
Bst1107I GTATAC 1 cut(s) 1316
Bst4CI ACNGT 7 cut(s) 155, 584, 1013, 1034, 1125, 1354, 1569
Bst6I CTCTTC 1 cut(s) 394
BstACI GRCGYC 5 cut(s) 213, 287, 505, 618, 1544
BstBAI YACGTR 1 cut(s) 1187
BstC8I GCNNGC 4 cut(s) 82, 903, 1374, 1548
BstDEI CTNAG 2 cut(s) 834, 1338
BstDSI CCRYGG 1 cut(s) 1050
BstFNI CGCG 2 cut(s) 578, 1052
BstH2I RGCGCY 1 cut(s) 245
BstHHI GCGC 3 cut(s) 244, 580, 920
BstKTI GATC 3 cut(s) 418, 927, 1043
BstMAI GTCTC 4 cut(s) 387, 596, 750, 1468
BstMBI GATC 3 cut(s) 415, 924, 1040
BstMCI CGRYCG 3 cut(s) 154, 172, 1116
BstMWI GCNNNNNNNGC 5 cut(s) 136, 219, 269, 1066, 1274
BstNSI RCATGY 5 cut(s) 12, 136, 918, 970, 1162
BstSCI CCNGG 3 cut(s) 748, 1074, 1086
BstUI CGCG 2 cut(s) 578, 1052
BstV1I GCAGC 5 cut(s) 84, 106, 148, 842, 1072
BstV2I GAAGAC 3 cut(s) 11, 737, 917
BstXI CCANNNNNNTGG 1 cut(s) 985
BstZ17I GTATAC 1 cut(s) 1316
BsuI GTATCC 1 cut(s) 780
BsuRI GGCC 3 cut(s) 125, 263, 881
BtgI CCRYGG 1 cut(s) 1050
BtrI CACGTC 2 cut(s) 283, 325
BtsI GCAGTG 2 cut(s) 1170, 1515
BtsIMutI CAGTG 3 cut(s) 777, 1170, 1515
Cac8I GCNNGC 4 cut(s) 82, 903, 1374, 1548
CciI TCATGA 1 cut(s) 927
CfoI GCGC 3 cut(s) 244, 580, 920
Cfr10I RCCGGY 2 cut(s) 80, 1546
Cfr13I GGNCC 1 cut(s) 262
Cfr42I CCGCGG 1 cut(s) 1053
CseI GACGC 6 cut(s) 100, 202, 276, 513, 626, 1552
Csp6I GTAC 9 cut(s) 277, 316, 475, 703, 736, 1047, 1079, 1162, 1199
CviQI GTAC 9 cut(s) 277, 316, 475, 703, 736, 1047, 1079, 1162, 1199
DdeI CTNAG 2 cut(s) 834, 1338
DpnI GATC 3 cut(s) 417, 926, 1042
DpnII GATC 3 cut(s) 415, 924, 1040
DrdI GACNNNNNNGTC 1 cut(s) 158
DriI GACNNNNNGTC 2 cut(s) 286, 763
DseDI GACNNNNNNGTC 1 cut(s) 158
EaeI YGGCCR 1 cut(s) 123
Eam1104I CTCTTC 1 cut(s) 394
Eam1105I GACNNNNNGTC 2 cut(s) 286, 763
EarI CTCTTC 1 cut(s) 394
EciI GGCGGA 3 cut(s) 259, 537, 1084
Ecl136II GAGCTC 1 cut(s) 857
Eco24I GRGCYC 1 cut(s) 859
Eco31I GGTCTC 1 cut(s) 750
Eco53kI GAGCTC 1 cut(s) 857
Eco88I CYCGRG 3 cut(s) 337, 760, 1064
EcoICRI GAGCTC 1 cut(s) 857
EcoT38I GRGCYC 1 cut(s) 859
FalI AAGNNNNNCTT 2 cut(s) 877, 909
FaqI GGGAC 2 cut(s) 904, 1327
FauI CCCGC 3 cut(s) 399, 954, 1045
FauNDI CATATG 1 cut(s) 47
FblI GTMKAC 2 cut(s) 252, 1315
Fnu4HI GCNGC 9 cut(s) 78, 85, 95, 98, 137, 220, 530, 831, 1061
FriOI GRGCYC 1 cut(s) 859
Fsp4HI GCNGC 9 cut(s) 78, 85, 95, 98, 137, 220, 530, 831, 1061
FspBI CTAG 6 cut(s) 365, 974, 1004, 1271, 1373, 1478
GlaI GCGC 3 cut(s) 243, 579, 919
GluI GCNGC 9 cut(s) 78, 85, 95, 98, 137, 220, 530, 831, 1061
GsaI CCCAGC 1 cut(s) 357
HaeII RGCGCY 1 cut(s) 245
HaeIII GGCC 3 cut(s) 125, 263, 881
HapII CCGG 9 cut(s) 81, 466, 750, 1038, 1076, 1088, 1547, 1554, 1572
HgaI GACGC 6 cut(s) 100, 202, 276, 513, 626, 1552
HhaI GCGC 3 cut(s) 244, 580, 920
Hin1I GRCGYC 5 cut(s) 213, 287, 505, 618, 1544
Hin6I GCGC 3 cut(s) 242, 578, 918
HinP1I GCGC 3 cut(s) 242, 578, 918
HincII GTYRAC 2 cut(s) 253, 463
HindII GTYRAC 2 cut(s) 253, 463
HinfI GANTC 4 cut(s) 981, 1298, 1606, 1633
HpaII CCGG 9 cut(s) 81, 466, 750, 1038, 1076, 1088, 1547, 1554, 1572
HphI GGTGA 3 cut(s) 1001, 1025, 1428
Hpy166II GTNNAC 7 cut(s) 253, 316, 349, 463, 587, 1096, 1316
Hpy188I TCNGA 7 cut(s) 185, 322, 774, 924, 1143, 1323, 1495
Hpy188III TCNNGA 9 cut(s) 370, 497, 805, 928, 1129, 1271, 1462, 1572, 1630
Hpy8I GTNNAC 7 cut(s) 253, 316, 349, 463, 587, 1096, 1316
Hpy99I CGWCG 6 cut(s) 116, 284, 326, 392, 620, 1546
HpyAV CCTTC 2 cut(s) 1188, 1449
HpyCH4III ACNGT 7 cut(s) 155, 584, 1013, 1034, 1125, 1354, 1569
HpyCH4IV ACGT 8 cut(s) 282, 324, 734, 998, 1017, 1186, 1245, 1318
HpyCH4V TGCA 7 cut(s) 51, 130, 136, 258, 1175, 1310, 1565
HpyF10VI GCNNNNNNNGC 5 cut(s) 136, 219, 269, 1066, 1274
HpyF3I CTNAG 2 cut(s) 834, 1338
HpySE526I ACGT 8 cut(s) 282, 324, 734, 998, 1017, 1186, 1245, 1318
Hsp92I GRCGYC 5 cut(s) 213, 287, 505, 618, 1544
HspAI GCGC 3 cut(s) 242, 578, 918
Kpn2I TCCGGA 1 cut(s) 1571
KpnI GGTACC 1 cut(s) 1050
KroI GCCGGC 2 cut(s) 80, 1546
KroNI GCCGGC 2 cut(s) 82, 1548
KspI CCGCGG 1 cut(s) 1053
Kzo9I GATC 3 cut(s) 415, 924, 1040
LmnI GCTCC 4 cut(s) 144, 338, 854, 862
Lsp1109I GCAGC 5 cut(s) 84, 106, 148, 842, 1072
MaeI CTAG 6 cut(s) 365, 974, 1004, 1271, 1373, 1478
MaeII ACGT 8 cut(s) 282, 324, 734, 998, 1017, 1186, 1245, 1318
MalI GATC 3 cut(s) 417, 926, 1042
MboI GATC 3 cut(s) 415, 924, 1040
MboII GAAGA 6 cut(s) 16, 52, 411, 485, 742, 922
MhlI GDGCHC 4 cut(s) 335, 779, 859, 1148
MluCI AATT 4 cut(s) 1023, 1288, 1304, 1347
MlyI GAGTC 2 cut(s) 990, 1292
MmeI TCCRAC 5 cut(s) 216, 315, 345, 1186, 1346
MreI CGCCGGCG 1 cut(s) 80
MroI TCCGGA 1 cut(s) 1571
MroNI GCCGGC 2 cut(s) 80, 1546
MseI TTAA 3 cut(s) 246, 876, 1022
MslI CAYNNNNRTG 1 cut(s) 131
MspA1I CMGCKG 5 cut(s) 97, 357, 788, 833, 1052
MspI CCGG 9 cut(s) 81, 466, 750, 1038, 1076, 1088, 1547, 1554, 1572
MspR9I CCNGG 3 cut(s) 750, 1076, 1088
Mva1269I GAATGC 2 cut(s) 1277, 1453
MvnI CGCG 2 cut(s) 578, 1052
MwoI GCNNNNNNNGC 5 cut(s) 136, 219, 269, 1066, 1274
NaeI GCCGGC 2 cut(s) 82, 1548
NciI CCSGG 3 cut(s) 750, 1076, 1088
NdeI CATATG 1 cut(s) 47
NdeII GATC 3 cut(s) 415, 924, 1040
NgoMIV GCCGGC 2 cut(s) 80, 1546
NheI GCTAGC 1 cut(s) 1372
NlaIV GGNNCC 4 cut(s) 1036, 1048, 1073, 1517
NmeAIII GCCGAG 1 cut(s) 298
NmuCI GTSAC 6 cut(s) 431, 608, 989, 1013, 1119, 1434
NspI RCATGY 5 cut(s) 12, 136, 918, 970, 1162
PagI TCATGA 1 cut(s) 927
PcsI WCGNNNNNNNCGW 3 cut(s) 156, 165, 174
PctI GAATGC 2 cut(s) 1277, 1453
PdiI GCCGGC 2 cut(s) 82, 1548
PfeI GAWTC 2 cut(s) 1606, 1633
PflFI GACNNNGTC 1 cut(s) 155
PkrI GCNGC 9 cut(s) 79, 86, 96, 99, 138, 221, 531, 832, 1062
PleI GAGTC 2 cut(s) 989, 1292
PpsI GAGTC 2 cut(s) 989, 1292
Ppu21I YACGTR 1 cut(s) 1187
Psp124BI GAGCTC 1 cut(s) 859
PspFI CCCAGC 1 cut(s) 353
PspN4I GGNNCC 4 cut(s) 1036, 1048, 1073, 1517
PspPI GGNCC 1 cut(s) 262
PsrI GAACNNNNNNTAC 2 cut(s) 1578, 1610
PsyI GACNNNGTC 1 cut(s) 155
PvuII CAGCTG 2 cut(s) 97, 833
RsaI GTAC 9 cut(s) 278, 317, 476, 704, 737, 1048, 1080, 1163, 1200
RsaNI GTAC 9 cut(s) 277, 316, 475, 703, 736, 1047, 1079, 1162, 1199
RseI CAYNNNNRTG 1 cut(s) 131
SacI GAGCTC 1 cut(s) 859
SacII CCGCGG 1 cut(s) 1053
SalI GTCGAC 1 cut(s) 251
SaqAI TTAA 3 cut(s) 246, 876, 1022
SatI GCNGC 9 cut(s) 78, 85, 95, 98, 137, 220, 530, 831, 1061
Sau3AI GATC 3 cut(s) 415, 924, 1040
Sau96I GGNCC 1 cut(s) 262
SchI GAGTC 2 cut(s) 990, 1292
ScrFI CCNGG 3 cut(s) 750, 1076, 1088
SduI GDGCHC 4 cut(s) 335, 779, 859, 1148
Sfr303I CCGCGG 1 cut(s) 1053
SgrAI CRCCGGYG 1 cut(s) 80
SgrBI CCGCGG 1 cut(s) 1053
SmiMI CAYNNNNRTG 1 cut(s) 131
SmlI CTYRAG 1 cut(s) 803
SmoI CTYRAG 1 cut(s) 803
SpeI ACTAGT 1 cut(s) 1477
Sse9I AATT 4 cut(s) 1023, 1288, 1304, 1347
SspMI CTAG 6 cut(s) 365, 974, 1004, 1271, 1373, 1478
SstI GAGCTC 1 cut(s) 859
StyD4I CCNGG 3 cut(s) 748, 1074, 1086
TaaI ACNGT 7 cut(s) 155, 584, 1013, 1034, 1125, 1354, 1569
TaiI ACGT 8 cut(s) 285, 327, 737, 1001, 1020, 1189, 1248, 1321
TaqI TCGA 5 cut(s) 168, 252, 1381, 1388, 1463
TasI AATT 4 cut(s) 1023, 1288, 1304, 1347
TatI WGTACW 1 cut(s) 315
TauI GCSGC 4 cut(s) 80, 87, 222, 532
TfiI GAWTC 2 cut(s) 1606, 1633
Tru1I TTAA 3 cut(s) 246, 876, 1022
Tru9I TTAA 3 cut(s) 246, 876, 1022
TscAI CASTG 3 cut(s) 784, 1177, 1515
TseFI GTSAC 6 cut(s) 431, 608, 989, 1013, 1119, 1434
TseI GCWGC 5 cut(s) 94, 97, 136, 830, 1060
Tsp45I GTSAC 6 cut(s) 431, 608, 989, 1013, 1119, 1434
TspDTI ATGAA 6 cut(s) 17, 34, 587, 1431, 1481, 1586
TspGWI ACGGA 3 cut(s) 290, 405, 408
TspRI CASTG 3 cut(s) 784, 1177, 1515
Tth111I GACNNNGTC 1 cut(s) 155
XbaI TCTAGA 1 cut(s) 1270
XceI RCATGY 5 cut(s) 12, 136, 918, 970, 1162
XcmI CCANNNNNNNNNTGG 1 cut(s) 1352
XmiI GTMKAC 2 cut(s) 252, 1315
XspI CTAG 6 cut(s) 365, 974, 1004, 1271, 1373, 1478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.