Rw6G010780

Galactose oxidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000556
Physical Location & Seq
Forward (+)
18760483 .. 18762126
1644 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G010780.1

Sequence Viewer

Length: 1644 bp
ATGAAGAAGTGCCCAACTCTACCCCATCTCATTGTTTCATTCCTCTTCATATCCACTTTTCTCTTCTCCCTGACCCACGCCGCCGGCGGCAAATGGGAGCTGCTTCTGAAAAGCGTCGGCATTTCCGCCATGCACATGCAGCTTCTCCACAACGACCGCGTCGTCATGTTCGACCGCACCAACTTCGGAAAATCCAACCTCTCCCTCCCCAACGGCGTCTGCCGCAACAACCCCAACGACACGGCGCTTAAAGTAGACTGCACGGCTCACTCGGCCGAGTACGACGTGGCGTCTAACCAAATTCGTCCCCTGTTCGTGTTCACAGACACGTGGTGCTCCTCGGGATCAGTAAACCCCAGCGGAAGTCTTGTCCAGACGGGAGGTTTCAACGACGGAGAGAGAAGGGTTAGGGTTTTTGATCCGTGTCCTACTTGTGACTGGAAAGAGATCGAGTTCGGGTTAGTCAACCGGAGATGGTACGCCACCAATCATATTCTGCCAGATGGAAAGCAGATAATCGTCGGCGGACGGAGGCAGTTCAACTACGAGTTTTACCCCAAAAGTGAAGGCACAATGAACGCTCACAGTTTGCCTTTTCTTGTCGAGACAAGTGACGGCAATGCCATAGAGAACAATCTCTACCCCTTTGTTTTTCTCAACGTTGACGGCAACCTTTTCATCTTCGCCAACAATAGAGCTATATTATTCGATTATGTTGCCGGTAAAATCGTGAAGACGTACCCAACAATACCCGGTGGAGACCCGAGGTCGTATCCGAGCACCGGTTCAGCGGTGATGTTACCTCTCATGAGTTCAAAAGGTCAGGCTGTGGCAGCTGAGGTTTTAGTCTGCGGTGGAGCTCCCAAAGGCTCTTATGTTAGTGCCCAAGGGGGGACCTTCGTGGAAGCATTGAAGACATGCGCTCGGATCAAAATAACCGACCCGAACGCGCAGTGGCTTGTGGAAGACATGCCTCTAGCTAGAGTCATGGGTGACATGACGTTGCTTCCCAACGGTGACGTTTTAATTATCAACGGTGCCGGACTAGGTGCCGCAGGGTGGGAGATCGGGCGGAACCCTGTACTCAACCCGGTTGTTTACAAGCCCGACAATGCGGTGGGGTCACGCTTCGAGCAACAAAACCCTAGTACCATACCACGCATGTACCACTCCACTGCAGTACTGCTTCGTGATGGAAGGGTACTTGTTGGAGGCAGTAATCCTCATAATCGTTACGAGTTCTCAAACGTGCTTTTCCCAACTGAACTTGCCTTAGAAGCATTCTCTCCTAATTACTTGGACTCGCAATTCGCAAGTATACGTCCGAGCATCTTATCACCTCGGTCACAAGCTAAGGTTGGTTATGGAAAGAAGCTAGCCATTCAATTTTCGATAAAGGGGAAAATGGCACTCAACTCGGTGTCTGTTACTATGGTGTCACCTTCATTTACTACGCATTCGTTCTCGATGAACCATAGGCTAGTGGTTCTTGCTTCCGAAAATGTTAGAGCACTGGGGAACTTGAAGTTTGAAGTTCAGGTTACGACTCCGGCTTCCGGTAATCTTGCACCTTCCGGATATTATCTTGTATATGTGATTCATCAGCAGATTCCAAGTGCGGGCATTTGGGTCAAAATTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

547

Amino Acids

59.84

Weight (kDa)

8.95

Isoelectric Point (pI)

34.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 44 - 432 4.1e-187 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 441 - 546 2e-26 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000556)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19900 AT1G75620
fragaria_vesca FvH4_2g08320 FvH4_2g08340 FvH4_2g39130 FvH4_2g39150
malus_domestica MD08G1016600.v1.1 MD08G1016900.v1.1 MD08G1017000.v1.1 MD08G1082100.v1.1 MD13G1087700.v1.1 MD14G1007900.v1.1 MD15G1015700.v1.1 MD15G1015800.v1.1 MD15G1015900.v1.1 MD15G1016000.v1.1 MD15G1068600.v1.1 MD15G1068700.v1.1
prunus_persica Prupe.1G369700_v2.0.a1 Prupe.1G369800_v2.0.a1
pyrus_communis pycom08g01440 pycom08g01450 pycom08g01480 pycom15g01350
rosa_chinensis RchiOBHm_Chr4g0408881 RchiOBHm_Chr6g0263281 RchiOBHm_Chr6g0263301 RchiOBHm_Chr6g0263331 RchiOBHm_Chr6g0302251 RchiOBHm_Chr6g0302271 RchiOBHm_Chr6g0302321 RchiOBHm_Chr6g0302331
rosa_laevigata RLG00000008616 RLG00000011177 RLG00000011178 RLG00000011182 RLG00000014357 RLG00000014362 RLG00000014363 RLG00000014365 RLG00000018749
rosa_multiflora Rmu_co8182314.1_g000001 Rmu_co8224130.1_g000001 Rmu_co8328361.1_g000001 Rmu_co8367879.1_g000001 Rmu_sc0000310.1_g000016 Rmu_sc0000310.1_g000033 Rmu_sc0001855.1_g000020 Rmu_sc0002778.1_g000005 Rmu_sc0003089.1_g000001 Rmu_sc0003089.1_g000012 Rmu_sc0003089.1_g000021 Rmu_sc0003633.1_g000013 Rmu_sc0003633.1_g000022
rosa_roxburghii Rroxscaffold_176G00431040 Rroxscaffold_5G00353250 Rroxscaffold_7G00165850 Rroxscaffold_7G00165920 Rroxscaffold_7G00165930 Rroxscaffold_7G00204510 Rroxscaffold_7G00204560
rosa_rugosa Rorug02G0245300 Rorug04G0088500 Rorug06G0004200 Rorug06G0004300 Rorug06G0313500 Rorug06G0313600 Rorug06G0313700
rosa_samantha Rh4CG160500 Rh6AG123400 Rh6AG123700 Rh6AG124000 Rh6AG426200 Rh6AG426400 Rh6AG426600 Rh7CG259000
rosa_wichuraiana Rw4G012520 Rw6G010610 Rw6G010620 Rw6G010640 Rw6G010780 Rw6G036900 Rw6G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 161
AccB1I GGYRCC 2 cut(s) 1037, 1049
AccI GTMKAC 2 cut(s) 255, 1318
AccII CGCG 2 cut(s) 159, 950
AccIII TCCGGA 1 cut(s) 1574
AclI AACGTT 1 cut(s) 660
AclWI GGATC 3 cut(s) 352, 413, 935
AcoI YGGCCR 1 cut(s) 273
AcsI RAATTY 2 cut(s) 300, 1635
AcvI CACGTG 1 cut(s) 330
AcyI GRCGYC 2 cut(s) 216, 290
AdeI CACNNNGTG 1 cut(s) 333
AfaI GTAC 8 cut(s) 281, 479, 740, 1083, 1150, 1166, 1182, 1203
AfiI CCNNNNNNNGG 5 cut(s) 782, 891, 1059, 1556, 1619
AflIII ACRYGT 1 cut(s) 327
AgeI ACCGGT 1 cut(s) 782
AgsI TTSAA 7 cut(s) 388, 541, 816, 913, 1385, 1525, 1532
AhdI GACNNNNNGTC 2 cut(s) 289, 766
AjiI CACGTC 1 cut(s) 286
AluBI AGCT 8 cut(s) 100, 142, 698, 836, 860, 980, 1352, 1375
AluI AGCT 8 cut(s) 100, 142, 698, 836, 860, 980, 1352, 1375
Alw21I GWGCWC 4 cut(s) 338, 782, 862, 1513
Alw26I GTCTC 2 cut(s) 599, 753
AlwI GGATC 3 cut(s) 352, 413, 935
Ama87I CYCGRG 2 cut(s) 340, 763
Aor13HI TCCGGA 1 cut(s) 1574
AoxI GGCC 1 cut(s) 273
ApeKI GCWGC 3 cut(s) 100, 139, 833
ApoI RAATTY 2 cut(s) 300, 1635
ArsI GACNNNNNNTTYG 2 cut(s) 1292, 1324
AsiGI ACCGGT 1 cut(s) 782
AspLEI GCGC 3 cut(s) 247, 923, 952
AspS9I GGNCC 1 cut(s) 894
AsuC2I CCSGG 2 cut(s) 753, 1091
AsuHPI GGTGA 5 cut(s) 805, 1004, 1028, 1329, 1431
AsuNHI GCTAGC 1 cut(s) 1375
AvaI CYCGRG 2 cut(s) 340, 763
AvaII GGWCC 1 cut(s) 894
BaeGI GKGCMC 2 cut(s) 14, 886
BaeI ACNNNNGTAYC 4 cut(s) 1132, 1148, 1165, 1181
BanI GGYRCC 2 cut(s) 1037, 1049
BanII GRGCYC 1 cut(s) 862
BbrPI CACGTG 1 cut(s) 330
BbsI GAAGAC 3 cut(s) 740, 920, 972
Bbv12I GWGCWC 4 cut(s) 338, 782, 862, 1513
BbvCI CCTCAGC 1 cut(s) 837
BbvI GCAGC 3 cut(s) 87, 151, 845
BccI CCATC 4 cut(s) 33, 468, 497, 1187
BceAI ACGGC 5 cut(s) 229, 258, 279, 631, 682
BcgI CGANNNNNNTGC 6 cut(s) 166, 200, 698, 732, 1398, 1432
BciVI GTATCC 1 cut(s) 783
BcnI CCSGG 2 cut(s) 753, 1091
BcoDI GTCTC 2 cut(s) 599, 753
BfaI CTAG 6 cut(s) 977, 981, 1046, 1146, 1376, 1481
BfmI CTRYAG 1 cut(s) 1176
BfoI RGCGCY 1 cut(s) 248
BfuI GTATCC 1 cut(s) 783
BisI GCNGC 7 cut(s) 81, 88, 101, 140, 223, 834, 1053
BlsI GCNGC 7 cut(s) 82, 89, 102, 141, 224, 835, 1054
BmcAI AGTACT 1 cut(s) 1182
Bme1390I CCNGG 2 cut(s) 753, 1091
Bme18I GGWCC 1 cut(s) 894
BmeRI GACNNNNNGTC 2 cut(s) 289, 766
BmeT110I CYCGRG 2 cut(s) 340, 763
BmgBI CACGTC 1 cut(s) 286
BmgT120I GGNCC 1 cut(s) 894
BmiI GGNNCC 4 cut(s) 895, 1039, 1051, 1076
BmrFI CCNGG 2 cut(s) 753, 1091
BmrI ACTGGG 1 cut(s) 1523
BmsI GCATC 1 cut(s) 1338
BmtI GCTAGC 1 cut(s) 1379
BmuI ACTGGG 1 cut(s) 1523
BpiI GAAGAC 3 cut(s) 740, 920, 972
Bpu10I CCTNAGC 2 cut(s) 837, 1353
BpuMI CCSGG 2 cut(s) 753, 1091
BsaAI YACGTR 1 cut(s) 330
BsaHI GRCGYC 2 cut(s) 216, 290
BsaI GGTCTC 1 cut(s) 753
BsaJI CCNNGG 4 cut(s) 339, 764, 886, 1340
BsaWI WCCGGW 4 cut(s) 468, 782, 1556, 1574
Bsc4I CCNNNNNNNGG 5 cut(s) 782, 891, 1059, 1556, 1619
Bse118I RCCGGY 3 cut(s) 83, 719, 782
Bse1I ACTGG 2 cut(s) 443, 1518
Bse3DI GCAATG 1 cut(s) 625
BseAI TCCGGA 1 cut(s) 1574
BseDI CCNNGG 4 cut(s) 339, 764, 886, 1340
BseLI CCNNNNNNNGG 5 cut(s) 782, 891, 1059, 1556, 1619
BseMI GCAATG 1 cut(s) 625
BseMII CTCAG 1 cut(s) 828
BseNI ACTGG 2 cut(s) 443, 1518
BseRI GAGGAG 1 cut(s) 328
BseSI GKGCMC 2 cut(s) 14, 886
BseX3I CGGCCG 1 cut(s) 273
BseXI GCAGC 3 cut(s) 87, 151, 845
BseYI CCCAGC 1 cut(s) 356
BsgI GTGCAG 1 cut(s) 244
Bsh1236I CGCG 2 cut(s) 159, 950
Bsh1285I CGRYCG 3 cut(s) 157, 175, 276
BshFI GGCC 1 cut(s) 275
BshNI GGYRCC 2 cut(s) 1037, 1049
BshTI ACCGGT 1 cut(s) 782
BsiEI CGRYCG 3 cut(s) 157, 175, 276
BsiHKAI GWGCWC 4 cut(s) 338, 782, 862, 1513
BsiHKCI CYCGRG 2 cut(s) 340, 763
BslFI GGGAC 2 cut(s) 291, 907
BslI CCNNNNNNNGG 5 cut(s) 782, 891, 1059, 1556, 1619
BsmAI GTCTC 2 cut(s) 599, 753
BsmFI GGGAC 2 cut(s) 291, 907
BsmI GAATGC 2 cut(s) 1280, 1456
BsnI GGCC 1 cut(s) 275
Bso31I GGTCTC 1 cut(s) 753
BsoBI CYCGRG 2 cut(s) 340, 763
Bsp1286I GDGCHC 6 cut(s) 14, 338, 782, 862, 886, 1513
Bsp13I TCCGGA 1 cut(s) 1574
Bsp143I GATC 5 cut(s) 344, 418, 447, 927, 1065
BspANI GGCC 1 cut(s) 275
BspCNI CTCAG 1 cut(s) 829
BspEI TCCGGA 1 cut(s) 1574
BspFNI CGCG 2 cut(s) 159, 950
BspHI TCATGA 1 cut(s) 807
BspLI GGNNCC 4 cut(s) 895, 1039, 1051, 1076
BspMAI CTGCAG 1 cut(s) 1180
BspOI GCTAGC 1 cut(s) 1379
BspPI GGATC 3 cut(s) 352, 413, 935
BspT107I GGYRCC 2 cut(s) 1037, 1049
BspTNI GGTCTC 1 cut(s) 753
BsrDI GCAATG 1 cut(s) 625
BsrFI RCCGGY 3 cut(s) 83, 719, 782
BsrI ACTGG 2 cut(s) 443, 1518
BssAI RCCGGY 3 cut(s) 83, 719, 782
BssECI CCNNGG 4 cut(s) 339, 764, 886, 1340
BssMI GATC 5 cut(s) 344, 418, 447, 927, 1065
BssNAI GTATAC 1 cut(s) 1319
BssNI GRCGYC 2 cut(s) 216, 290
BssT1I CCWWGG 1 cut(s) 886
Bst1107I GTATAC 1 cut(s) 1319
Bst4CI ACNGT 3 cut(s) 587, 1016, 1037
Bst6I CTCTTC 2 cut(s) 50, 68
BstACI GRCGYC 2 cut(s) 216, 290
BstBAI YACGTR 1 cut(s) 330
BstC8I GCNNGC 3 cut(s) 85, 1377, 1621
BstDEI CTNAG 3 cut(s) 837, 1273, 1353
BstFNI CGCG 2 cut(s) 159, 950
BstH2I RGCGCY 1 cut(s) 248
BstHHI GCGC 3 cut(s) 247, 923, 952
BstKTI GATC 5 cut(s) 347, 421, 450, 930, 1068
BstMAI GTCTC 2 cut(s) 599, 753
BstMBI GATC 5 cut(s) 344, 418, 447, 927, 1065
BstMCI CGRYCG 3 cut(s) 157, 175, 276
BstMWI GCNNNNNNNGC 5 cut(s) 139, 222, 272, 833, 1277
BstNSI RCATGY 4 cut(s) 139, 921, 973, 1165
BstSCI CCNGG 2 cut(s) 751, 1089
BstSFI CTRYAG 1 cut(s) 1176
BstSLI GKGCMC 2 cut(s) 14, 886
BstUI CGCG 2 cut(s) 159, 950
BstV1I GCAGC 3 cut(s) 87, 151, 845
BstV2I GAAGAC 3 cut(s) 740, 920, 972
BstZ17I GTATAC 1 cut(s) 1319
BstZI CGGCCG 1 cut(s) 273
BsuI GTATCC 1 cut(s) 783
BsuRI GGCC 1 cut(s) 275
BtrI CACGTC 1 cut(s) 286
BtsI GCAGTG 2 cut(s) 959, 1173
BtsIMutI CAGTG 3 cut(s) 959, 1173, 1511
Cac8I GCNNGC 3 cut(s) 85, 1377, 1621
CciI TCATGA 1 cut(s) 807
CfoI GCGC 3 cut(s) 247, 923, 952
Cfr10I RCCGGY 3 cut(s) 83, 719, 782
Cfr13I GGNCC 1 cut(s) 894
CseI GACGC 4 cut(s) 103, 148, 205, 279
Csp6I GTAC 8 cut(s) 280, 478, 739, 1082, 1149, 1165, 1181, 1202
CspAI ACCGGT 1 cut(s) 782
CviAII CATG 9 cut(s) 130, 136, 166, 808, 918, 970, 988, 997, 1162
CviQI GTAC 8 cut(s) 280, 478, 739, 1082, 1149, 1165, 1181, 1202
DdeI CTNAG 3 cut(s) 837, 1273, 1353
DpnI GATC 5 cut(s) 346, 420, 449, 929, 1067
DpnII GATC 5 cut(s) 344, 418, 447, 927, 1065
DraIII CACNNNGTG 1 cut(s) 333
DrdI GACNNNNNNGTC 1 cut(s) 161
DriI GACNNNNNGTC 2 cut(s) 289, 766
DseDI GACNNNNNNGTC 1 cut(s) 161
EaeI YGGCCR 1 cut(s) 273
EagI CGGCCG 1 cut(s) 273
Eam1104I CTCTTC 2 cut(s) 50, 68
Eam1105I GACNNNNNGTC 2 cut(s) 289, 766
EarI CTCTTC 2 cut(s) 50, 68
EciI GGCGGA 3 cut(s) 115, 540, 1087
Ecl136II GAGCTC 1 cut(s) 860
EclXI CGGCCG 1 cut(s) 273
Eco130I CCWWGG 1 cut(s) 886
Eco24I GRGCYC 1 cut(s) 862
Eco31I GGTCTC 1 cut(s) 753
Eco47I GGWCC 1 cut(s) 894
Eco52I CGGCCG 1 cut(s) 273
Eco53kI GAGCTC 1 cut(s) 860
Eco72I CACGTG 1 cut(s) 330
Eco88I CYCGRG 2 cut(s) 340, 763
EcoICRI GAGCTC 1 cut(s) 860
EcoO109I RGGNCCY 1 cut(s) 894
EcoT14I CCWWGG 1 cut(s) 886
EcoT38I GRGCYC 1 cut(s) 862
ErhI CCWWGG 1 cut(s) 886
FaeI CATG 9 cut(s) 133, 139, 169, 811, 921, 973, 991, 1000, 1165
FaqI GGGAC 2 cut(s) 291, 907
FatI CATG 9 cut(s) 129, 135, 165, 807, 917, 969, 987, 996, 1161
FauI CCCGC 1 cut(s) 1612
FblI GTMKAC 2 cut(s) 255, 1318
Fnu4HI GCNGC 7 cut(s) 81, 88, 101, 140, 223, 834, 1053
FriOI GRGCYC 1 cut(s) 862
Fsp4HI GCNGC 7 cut(s) 81, 88, 101, 140, 223, 834, 1053
FspBI CTAG 6 cut(s) 977, 981, 1046, 1146, 1376, 1481
GlaI GCGC 3 cut(s) 246, 922, 951
GluI GCNGC 7 cut(s) 81, 88, 101, 140, 223, 834, 1053
GsaI CCCAGC 1 cut(s) 360
HaeII RGCGCY 1 cut(s) 248
HaeIII GGCC 1 cut(s) 275
HgaI GACGC 4 cut(s) 103, 148, 205, 279
HhaI GCGC 3 cut(s) 247, 923, 952
Hin1I GRCGYC 2 cut(s) 216, 290
Hin1II CATG 9 cut(s) 133, 139, 169, 811, 921, 973, 991, 1000, 1165
Hin6I GCGC 3 cut(s) 245, 921, 950
HinP1I GCGC 3 cut(s) 245, 921, 950
HincII GTYRAC 2 cut(s) 466, 664
HindII GTYRAC 2 cut(s) 466, 664
HinfI GANTC 5 cut(s) 984, 1301, 1546, 1597, 1609
HphI GGTGA 5 cut(s) 805, 1004, 1028, 1329, 1431
Hpy166II GTNNAC 7 cut(s) 256, 321, 352, 466, 664, 1099, 1319
Hpy188I TCNGA 6 cut(s) 108, 188, 777, 927, 1326, 1498
Hpy188III TCNNGA 8 cut(s) 342, 373, 604, 730, 808, 1190, 1465, 1575
Hpy8I GTNNAC 7 cut(s) 256, 321, 352, 466, 664, 1099, 1319
Hpy99I CGWCG 5 cut(s) 119, 164, 287, 395, 524
HpyAV CCTTC 6 cut(s) 396, 560, 907, 1191, 1452, 1581
HpyCH4III ACNGT 3 cut(s) 587, 1016, 1037
HpyCH4IV ACGT 8 cut(s) 285, 329, 660, 737, 1001, 1020, 1248, 1321
HpyCH4V TGCA 5 cut(s) 133, 139, 261, 1178, 1568
HpyF10VI GCNNNNNNNGC 5 cut(s) 139, 222, 272, 833, 1277
HpyF3I CTNAG 3 cut(s) 837, 1273, 1353
HpySE526I ACGT 8 cut(s) 285, 329, 660, 737, 1001, 1020, 1248, 1321
Hsp92I GRCGYC 2 cut(s) 216, 290
Hsp92II CATG 9 cut(s) 133, 139, 169, 811, 921, 973, 991, 1000, 1165
HspAI GCGC 3 cut(s) 245, 921, 950
Kpn2I TCCGGA 1 cut(s) 1574
KroI GCCGGC 1 cut(s) 83
KroNI GCCGGC 1 cut(s) 85
Kzo9I GATC 5 cut(s) 344, 418, 447, 927, 1065
LmnI GCTCC 4 cut(s) 97, 341, 857, 865
Lsp1109I GCAGC 3 cut(s) 87, 151, 845
LweI GCATC 1 cut(s) 1338
MaeI CTAG 6 cut(s) 977, 981, 1046, 1146, 1376, 1481
MaeII ACGT 8 cut(s) 285, 329, 660, 737, 1001, 1020, 1248, 1321
MalI GATC 5 cut(s) 346, 420, 449, 929, 1067
MboI GATC 5 cut(s) 344, 418, 447, 927, 1065
MboII GAAGA 7 cut(s) 16, 37, 55, 673, 745, 925, 977
MhlI GDGCHC 6 cut(s) 14, 338, 782, 862, 886, 1513
MluCI AATT 6 cut(s) 300, 1026, 1291, 1307, 1385, 1635
MlyI GAGTC 3 cut(s) 993, 1295, 1540
MmeI TCCRAC 2 cut(s) 219, 1189
MreI CGCCGGCG 1 cut(s) 83
MroI TCCGGA 1 cut(s) 1574
MroNI GCCGGC 1 cut(s) 83
MseI TTAA 2 cut(s) 249, 1025
MslI CAYNNNNRTG 1 cut(s) 134
MspA1I CMGCKG 3 cut(s) 360, 791, 836
MspR9I CCNGG 2 cut(s) 753, 1091
Mva1269I GAATGC 2 cut(s) 1280, 1456
MvnI CGCG 2 cut(s) 159, 950
MwoI GCNNNNNNNGC 5 cut(s) 139, 222, 272, 833, 1277
NaeI GCCGGC 1 cut(s) 85
NciI CCSGG 2 cut(s) 753, 1091
NdeII GATC 5 cut(s) 344, 418, 447, 927, 1065
NgoMIV GCCGGC 1 cut(s) 83
NheI GCTAGC 1 cut(s) 1375
NlaIII CATG 9 cut(s) 133, 139, 169, 811, 921, 973, 991, 1000, 1165
NlaIV GGNNCC 4 cut(s) 895, 1039, 1051, 1076
NmeAIII GCCGAG 2 cut(s) 251, 301
NmuCI GTSAC 7 cut(s) 434, 611, 992, 1016, 1122, 1344, 1437
NspI RCATGY 4 cut(s) 139, 921, 973, 1165
PagI TCATGA 1 cut(s) 807
PcsI WCGNNNNNNNCGW 2 cut(s) 159, 168
PctI GAATGC 2 cut(s) 1280, 1456
PdiI GCCGGC 1 cut(s) 85
PfeI GAWTC 2 cut(s) 1597, 1609
PflFI GACNNNGTC 1 cut(s) 158
PinAI ACCGGT 1 cut(s) 782
PkrI GCNGC 7 cut(s) 82, 89, 102, 141, 224, 835, 1054
PleI GAGTC 3 cut(s) 992, 1295, 1540
PmaCI CACGTG 1 cut(s) 330
PmlI CACGTG 1 cut(s) 330
PpsI GAGTC 3 cut(s) 992, 1295, 1540
Ppu21I YACGTR 1 cut(s) 330
PpuMI RGGWCCY 1 cut(s) 894
Psp124BI GAGCTC 1 cut(s) 862
Psp1406I AACGTT 1 cut(s) 660
Psp5II RGGWCCY 1 cut(s) 894
PspCI CACGTG 1 cut(s) 330
PspFI CCCAGC 1 cut(s) 356
PspN4I GGNNCC 4 cut(s) 895, 1039, 1051, 1076
PspPI GGNCC 1 cut(s) 894
PspPPI RGGWCCY 1 cut(s) 894
PsrI GAACNNNNNNTAC 2 cut(s) 623, 655
PstI CTGCAG 1 cut(s) 1180
PsyI GACNNNGTC 1 cut(s) 158
PvuII CAGCTG 1 cut(s) 836
RsaI GTAC 8 cut(s) 281, 479, 740, 1083, 1150, 1166, 1182, 1203
RsaNI GTAC 8 cut(s) 280, 478, 739, 1082, 1149, 1165, 1181, 1202
RseI CAYNNNNRTG 1 cut(s) 134
SacI GAGCTC 1 cut(s) 862
SaqAI TTAA 2 cut(s) 249, 1025
SatI GCNGC 7 cut(s) 81, 88, 101, 140, 223, 834, 1053
Sau3AI GATC 5 cut(s) 344, 418, 447, 927, 1065
Sau96I GGNCC 1 cut(s) 894
ScaI AGTACT 1 cut(s) 1182
SchI GAGTC 3 cut(s) 993, 1295, 1540
ScrFI CCNGG 2 cut(s) 753, 1091
SduI GDGCHC 6 cut(s) 14, 338, 782, 862, 886, 1513
SfaNI GCATC 1 cut(s) 1338
SfcI CTRYAG 1 cut(s) 1176
SgrAI CRCCGGYG 1 cut(s) 83
SinI GGWCC 1 cut(s) 894
SmiMI CAYNNNNRTG 1 cut(s) 134
Sse9I AATT 6 cut(s) 300, 1026, 1291, 1307, 1385, 1635
SspMI CTAG 6 cut(s) 977, 981, 1046, 1146, 1376, 1481
SstI GAGCTC 1 cut(s) 862
StyD4I CCNGG 2 cut(s) 751, 1089
StyI CCWWGG 1 cut(s) 886
TaaI ACNGT 3 cut(s) 587, 1016, 1037
TaiI ACGT 8 cut(s) 288, 332, 663, 740, 1004, 1023, 1251, 1324
TaqI TCGA 7 cut(s) 171, 450, 603, 708, 1131, 1391, 1466
TaqII GACCGA 1 cut(s) 1332
TasI AATT 6 cut(s) 300, 1026, 1291, 1307, 1385, 1635
TatI WGTACW 2 cut(s) 1081, 1180
TauI GCSGC 4 cut(s) 83, 90, 225, 1055
TfiI GAWTC 2 cut(s) 1597, 1609
Tru1I TTAA 2 cut(s) 249, 1025
Tru9I TTAA 2 cut(s) 249, 1025
TscAI CASTG 3 cut(s) 959, 1180, 1518
TseFI GTSAC 7 cut(s) 434, 611, 992, 1016, 1122, 1344, 1437
TseI GCWGC 3 cut(s) 100, 139, 833
Tsp45I GTSAC 7 cut(s) 434, 611, 992, 1016, 1122, 1344, 1437
TspDTI ATGAA 8 cut(s) 17, 27, 37, 590, 667, 1434, 1484, 1589
TspGWI ACGGA 3 cut(s) 408, 411, 544
TspRI CASTG 3 cut(s) 959, 1180, 1518
Tth111I GACNNNGTC 1 cut(s) 158
VpaK11BI GGWCC 1 cut(s) 894
XapI RAATTY 2 cut(s) 300, 1635
XceI RCATGY 4 cut(s) 139, 921, 973, 1165
XmiI GTMKAC 2 cut(s) 255, 1318
XspI CTAG 6 cut(s) 977, 981, 1046, 1146, 1376, 1481
ZrmI AGTACT 1 cut(s) 1182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.