Rw6G010620

Galactose oxidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000556
Physical Location & Seq
Forward (+)
18358461 .. 18360104
1644 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G010620.1

Sequence Viewer

Length: 1644 bp
ATGAAGAAGTGCCCAACTCTACCCCATCTCATTGTTTCATTCCTCTTCATATCCACTTTTCTCTTCTCCCTGACCCACGCCGCCGGCGGCAAATGGGAGCTGCTTCTGAAAAGCGTCGGCATTTCCGCCATGCACATGCAGCTCCTTCACAACGACCGCGTCGTCATGTTCGACCGCACAGACTTCGGAAAATCCAACCTCTCCCTCCCCAACGGCGTCTGCCGCAACAACCCCAACGACACGGCGCTTAAAGTCGACTGCACGGCTCACTCGGCCGAGTACGACGTGGCGTCTAACAATATCCGTCCCCTGTTCGTGTACTCGGACACTTGGTGCTCCTCGGGATCAGTAAACCCCAAAGGAAGTCTGGTCCAGACGGGAGGTTTCAACGACGGAGATAGAAGGGTTAGGGTTTTTGATCCGTGTCCTACTTGTGACTGGAAAGAGATCGAGTTCGGGTTAGTCAACCGGAGATGGTACGCCAGCAATCATATTCTGCCAGATGGACGGCAGATAATCATCGGCGGAACGCGGCAGTTCAACTACGAGTTTTACCCCAAAAGTGAAGGCTCAATGAACGCTGTCAGTTTGCCTTTTCTTGCTGAGACAAGTGACGGCAAAGCCATAGAGAACAATCTCTACCCCTTTGTTTTTCTCAACGTTGACGGCAACCTCTTCATCTTCGCCAACAATAGAGCTATATTGTTTGATTATGTTGCCGGTAAAATCTTGAAGACGTACCCAACAATACCCGGTGGAGACCCGAGGTCGTATCCGAGCACCGGTTCAGCGGTGTTGTTACCTCTCAAGAGTTCAAAAGGTCAGGCTGTGGCAGCTGAGGTTTTAGTCTGCGGTGGAGCTCCCAAAGGCTCTTACGTTAATGCCCAAAAGGGGACTTTTGTGGAAGCATTGAAGACATGCGCTCGGATCAAAATAACCGACGCAAACCCGCAGTGGCTTGTGGAAGACATGCCTCTAGCTAGAGTCATGGGTGACATGACGTTACTTCCCAACGGTGACGTTTTAATTATCAACGGTGCCGGATTAGGTACCGCGGGGTGGGAGATCGGGCGGAACCCGGTACTCAACCCGGTTGTTTACAAGCCCAATAATGCGGTCGGGTCACGGTTCGAGCAACAAAACGCTAGTACCATACCACGGATGTACCACTCCACTGCAGTACTGCTACGTGATGGAAGGGTACTTGTTGGAGGTAGTAACCCTCATAATCGTTACGAGTTCTCAAACGTGCTTTTCCCAACCGAGCTTGCCTTAGAAGCATTCTCTCCTAATTACTTGGACTCGCAATTCGCAAGTATACGCCCGACCATCTTATCACCTCGGTCACAGGTTAAGGTTGGTTATGGAAAGAAGCTAGCCATTCAATTTTCGATAACGGGGAAAATAGCACTAGACTCGGTGTCCGTTACGATGGTGTTACCTTCATTTACTACCCATTCGTTCTCGATGAACCATAGGCTAGTGGTTCTTGCTTCCGAGAAGGTTAAAGCACTGGGGAACTTGAAGTTTCAAGTTCAGGTTACGACGCCGGCTTCTGGTAATCTTGCTCCGTCAGGATATTATCTTGTATATGTGGTTCATCAGCAGATTCCAAGTGCGGGCATTTGGATCAAAATTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

547

Amino Acids

59.87

Weight (kDa)

9.13

Isoelectric Point (pI)

32.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 44 - 432 1.3e-186 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 441 - 546 1.1e-25 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000556)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19900 AT1G75620
fragaria_vesca FvH4_2g08320 FvH4_2g08340 FvH4_2g39130 FvH4_2g39150
malus_domestica MD08G1016600.v1.1 MD08G1016900.v1.1 MD08G1017000.v1.1 MD08G1082100.v1.1 MD13G1087700.v1.1 MD14G1007900.v1.1 MD15G1015700.v1.1 MD15G1015800.v1.1 MD15G1015900.v1.1 MD15G1016000.v1.1 MD15G1068600.v1.1 MD15G1068700.v1.1
prunus_persica Prupe.1G369700_v2.0.a1 Prupe.1G369800_v2.0.a1
pyrus_communis pycom08g01440 pycom08g01450 pycom08g01480 pycom15g01350
rosa_chinensis RchiOBHm_Chr4g0408881 RchiOBHm_Chr6g0263281 RchiOBHm_Chr6g0263301 RchiOBHm_Chr6g0263331 RchiOBHm_Chr6g0302251 RchiOBHm_Chr6g0302271 RchiOBHm_Chr6g0302321 RchiOBHm_Chr6g0302331
rosa_laevigata RLG00000008616 RLG00000011177 RLG00000011178 RLG00000011182 RLG00000014357 RLG00000014362 RLG00000014363 RLG00000014365 RLG00000018749
rosa_multiflora Rmu_co8182314.1_g000001 Rmu_co8224130.1_g000001 Rmu_co8328361.1_g000001 Rmu_co8367879.1_g000001 Rmu_sc0000310.1_g000016 Rmu_sc0000310.1_g000033 Rmu_sc0001855.1_g000020 Rmu_sc0002778.1_g000005 Rmu_sc0003089.1_g000001 Rmu_sc0003089.1_g000012 Rmu_sc0003089.1_g000021 Rmu_sc0003633.1_g000013 Rmu_sc0003633.1_g000022
rosa_roxburghii Rroxscaffold_176G00431040 Rroxscaffold_5G00353250 Rroxscaffold_7G00165850 Rroxscaffold_7G00165920 Rroxscaffold_7G00165930 Rroxscaffold_7G00204510 Rroxscaffold_7G00204560
rosa_rugosa Rorug02G0245300 Rorug04G0088500 Rorug06G0004200 Rorug06G0004300 Rorug06G0313500 Rorug06G0313600 Rorug06G0313700
rosa_samantha Rh4CG160500 Rh6AG123400 Rh6AG123700 Rh6AG124000 Rh6AG426200 Rh6AG426400 Rh6AG426600 Rh7CG259000
rosa_wichuraiana Rw4G012520 Rw6G010610 Rw6G010620 Rw6G010640 Rw6G010780 Rw6G036900 Rw6G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 161
Acc65I GGTACC 1 cut(s) 1049
AccB1I GGYRCC 2 cut(s) 1037, 1049
AccI GTMKAC 2 cut(s) 255, 1318
AccII CGCG 3 cut(s) 159, 532, 1055
AclI AACGTT 1 cut(s) 660
AclWI GGATC 4 cut(s) 352, 413, 935, 1637
AcoI YGGCCR 1 cut(s) 273
AcsI RAATTY 1 cut(s) 1635
AcyI GRCGYC 3 cut(s) 216, 290, 1547
AdeI CACNNNGTG 1 cut(s) 333
AfiI CCNNNNNNNGG 6 cut(s) 782, 891, 1059, 1158, 1556, 1619
AgeI ACCGGT 1 cut(s) 782
AgsI TTSAA 9 cut(s) 388, 541, 733, 816, 913, 1385, 1525, 1532, 1640
AhdI GACNNNNNGTC 3 cut(s) 289, 766, 1420
AjiI CACGTC 1 cut(s) 286
AluBI AGCT 8 cut(s) 100, 142, 698, 836, 860, 980, 1267, 1375
AluI AGCT 8 cut(s) 100, 142, 698, 836, 860, 980, 1267, 1375
Alw21I GWGCWC 3 cut(s) 338, 782, 862
Alw26I GTCTC 2 cut(s) 599, 753
AlwI GGATC 4 cut(s) 352, 413, 935, 1637
Ama87I CYCGRG 2 cut(s) 340, 763
AoxI GGCC 1 cut(s) 273
ApeKI GCWGC 3 cut(s) 100, 139, 833
ApoI RAATTY 1 cut(s) 1635
ArsI GACNNNNNNTTYG 2 cut(s) 1292, 1324
AsiGI ACCGGT 1 cut(s) 782
Asp718I GGTACC 1 cut(s) 1049
AspLEI GCGC 2 cut(s) 247, 923
AspS9I GGNCC 1 cut(s) 370
AsuC2I CCSGG 3 cut(s) 753, 1079, 1091
AsuHPI GGTGA 3 cut(s) 1004, 1028, 1329
AsuNHI GCTAGC 1 cut(s) 1375
AvaI CYCGRG 2 cut(s) 340, 763
AvaII GGWCC 1 cut(s) 370
BaeGI GKGCMC 1 cut(s) 14
BaeI ACNNNNGTAYC 4 cut(s) 1132, 1148, 1165, 1181
BanI GGYRCC 2 cut(s) 1037, 1049
BanII GRGCYC 1 cut(s) 862
BbsI GAAGAC 3 cut(s) 740, 920, 972
Bbv12I GWGCWC 3 cut(s) 338, 782, 862
BbvCI CCTCAGC 1 cut(s) 837
BbvI GCAGC 3 cut(s) 87, 151, 845
BccI CCATC 6 cut(s) 33, 468, 497, 1187, 1337, 1426
BceAI ACGGC 6 cut(s) 229, 258, 279, 524, 631, 682
BcgI CGANNNNNNTGC 4 cut(s) 166, 200, 1398, 1432
BciVI GTATCC 1 cut(s) 783
BcnI CCSGG 3 cut(s) 753, 1079, 1091
BcoDI GTCTC 2 cut(s) 599, 753
BfaI CTAG 6 cut(s) 977, 981, 1146, 1376, 1412, 1481
BfmI CTRYAG 1 cut(s) 1176
BfoI RGCGCY 1 cut(s) 248
BfuI GTATCC 1 cut(s) 783
BisI GCNGC 7 cut(s) 81, 88, 101, 140, 223, 533, 834
BlsI GCNGC 7 cut(s) 82, 89, 102, 141, 224, 534, 835
BmcAI AGTACT 1 cut(s) 1182
Bme1390I CCNGG 3 cut(s) 753, 1079, 1091
Bme18I GGWCC 1 cut(s) 370
BmeRI GACNNNNNGTC 3 cut(s) 289, 766, 1420
BmeT110I CYCGRG 2 cut(s) 340, 763
BmgBI CACGTC 1 cut(s) 286
BmgT120I GGNCC 1 cut(s) 370
BmiI GGNNCC 3 cut(s) 1039, 1051, 1076
BmrFI CCNGG 3 cut(s) 753, 1079, 1091
BmrI ACTGGG 1 cut(s) 1523
BmtI GCTAGC 1 cut(s) 1379
BmuI ACTGGG 1 cut(s) 1523
BpiI GAAGAC 3 cut(s) 740, 920, 972
Bpu10I CCTNAGC 1 cut(s) 837
BpuEI CTTGAG 1 cut(s) 791
BpuMI CCSGG 3 cut(s) 753, 1079, 1091
BsaAI YACGTR 1 cut(s) 1190
BsaBI GATNNNNATC 1 cut(s) 518
BsaHI GRCGYC 3 cut(s) 216, 290, 1547
BsaI GGTCTC 1 cut(s) 753
BsaJI CCNNGG 5 cut(s) 339, 764, 1053, 1157, 1340
BsaWI WCCGGW 2 cut(s) 468, 782
Bsc4I CCNNNNNNNGG 6 cut(s) 782, 891, 1059, 1158, 1556, 1619
Bse118I RCCGGY 4 cut(s) 83, 719, 782, 1549
Bse1I ACTGG 2 cut(s) 443, 1518
Bse8I GATNNNNATC 1 cut(s) 518
BseDI CCNNGG 5 cut(s) 339, 764, 1053, 1157, 1340
BseGI GGATG 1 cut(s) 1167
BseJI GATNNNNATC 1 cut(s) 518
BseLI CCNNNNNNNGG 6 cut(s) 782, 891, 1059, 1158, 1556, 1619
BseMII CTCAG 2 cut(s) 594, 828
BseNI ACTGG 2 cut(s) 443, 1518
BseRI GAGGAG 1 cut(s) 328
BseSI GKGCMC 1 cut(s) 14
BseX3I CGGCCG 1 cut(s) 273
BseXI GCAGC 3 cut(s) 87, 151, 845
BsgI GTGCAG 1 cut(s) 244
Bsh1236I CGCG 3 cut(s) 159, 532, 1055
Bsh1285I CGRYCG 4 cut(s) 157, 175, 276, 1119
BshFI GGCC 1 cut(s) 275
BshNI GGYRCC 2 cut(s) 1037, 1049
BshTI ACCGGT 1 cut(s) 782
BsiEI CGRYCG 4 cut(s) 157, 175, 276, 1119
BsiHKAI GWGCWC 3 cut(s) 338, 782, 862
BsiHKCI CYCGRG 2 cut(s) 340, 763
BsiSI CCGG 9 cut(s) 84, 469, 720, 753, 783, 1041, 1079, 1091, 1550
BslFI GGGAC 2 cut(s) 291, 907
BslI CCNNNNNNNGG 6 cut(s) 782, 891, 1059, 1158, 1556, 1619
BsmAI GTCTC 2 cut(s) 599, 753
BsmFI GGGAC 2 cut(s) 291, 907
BsmI GAATGC 1 cut(s) 1280
BsnI GGCC 1 cut(s) 275
Bso31I GGTCTC 1 cut(s) 753
BsoBI CYCGRG 2 cut(s) 340, 763
Bsp1286I GDGCHC 4 cut(s) 14, 338, 782, 862
Bsp143I GATC 6 cut(s) 344, 418, 447, 927, 1065, 1629
BspANI GGCC 1 cut(s) 275
BspCNI CTCAG 2 cut(s) 595, 829
BspFNI CGCG 3 cut(s) 159, 532, 1055
BspLI GGNNCC 3 cut(s) 1039, 1051, 1076
BspMAI CTGCAG 1 cut(s) 1180
BspOI GCTAGC 1 cut(s) 1379
BspPI GGATC 4 cut(s) 352, 413, 935, 1637
BspT107I GGYRCC 2 cut(s) 1037, 1049
BspTNI GGTCTC 1 cut(s) 753
BsrFI RCCGGY 4 cut(s) 83, 719, 782, 1549
BsrI ACTGG 2 cut(s) 443, 1518
BssAI RCCGGY 4 cut(s) 83, 719, 782, 1549
BssECI CCNNGG 5 cut(s) 339, 764, 1053, 1157, 1340
BssMI GATC 6 cut(s) 344, 418, 447, 927, 1065, 1629
BssNAI GTATAC 1 cut(s) 1319
BssNI GRCGYC 3 cut(s) 216, 290, 1547
Bst1107I GTATAC 1 cut(s) 1319
Bst4CI ACNGT 3 cut(s) 1016, 1037, 1128
Bst6I CTCTTC 3 cut(s) 50, 68, 680
BstACI GRCGYC 3 cut(s) 216, 290, 1547
BstBAI YACGTR 1 cut(s) 1190
BstC8I GCNNGC 6 cut(s) 85, 484, 1269, 1377, 1551, 1621
BstDEI CTNAG 3 cut(s) 603, 837, 1273
BstDSI CCRYGG 2 cut(s) 1053, 1157
BstF5I GGATG 1 cut(s) 1167
BstFNI CGCG 3 cut(s) 159, 532, 1055
BstH2I RGCGCY 1 cut(s) 248
BstHHI GCGC 2 cut(s) 247, 923
BstKTI GATC 6 cut(s) 347, 421, 450, 930, 1068, 1632
BstMAI GTCTC 2 cut(s) 599, 753
BstMBI GATC 6 cut(s) 344, 418, 447, 927, 1065, 1629
BstMCI CGRYCG 4 cut(s) 157, 175, 276, 1119
BstMWI GCNNNNNNNGC 5 cut(s) 139, 222, 272, 833, 1277
BstNSI RCATGY 3 cut(s) 139, 921, 973
BstSCI CCNGG 3 cut(s) 751, 1077, 1089
BstSFI CTRYAG 1 cut(s) 1176
BstSLI GKGCMC 1 cut(s) 14
BstUI CGCG 3 cut(s) 159, 532, 1055
BstV1I GCAGC 3 cut(s) 87, 151, 845
BstV2I GAAGAC 3 cut(s) 740, 920, 972
BstZ17I GTATAC 1 cut(s) 1319
BstZI CGGCCG 1 cut(s) 273
BsuI GTATCC 1 cut(s) 783
BsuRI GGCC 1 cut(s) 275
BtgI CCRYGG 2 cut(s) 1053, 1157
BtrI CACGTC 1 cut(s) 286
BtsCI GGATG 1 cut(s) 1167
BtsI GCAGTG 2 cut(s) 959, 1173
BtsIMutI CAGTG 3 cut(s) 959, 1173, 1511
Cac8I GCNNGC 6 cut(s) 85, 484, 1269, 1377, 1551, 1621
CfoI GCGC 2 cut(s) 247, 923
Cfr10I RCCGGY 4 cut(s) 83, 719, 782, 1549
Cfr13I GGNCC 1 cut(s) 370
Cfr42I CCGCGG 1 cut(s) 1056
CseI GACGC 6 cut(s) 103, 148, 205, 279, 950, 1555
CspAI ACCGGT 1 cut(s) 782
CviAII CATG 7 cut(s) 130, 136, 166, 918, 970, 988, 997
DdeI CTNAG 3 cut(s) 603, 837, 1273
DpnI GATC 6 cut(s) 346, 420, 449, 929, 1067, 1631
DpnII GATC 6 cut(s) 344, 418, 447, 927, 1065, 1629
DraIII CACNNNGTG 1 cut(s) 333
DrdI GACNNNNNNGTC 1 cut(s) 161
DriI GACNNNNNGTC 3 cut(s) 289, 766, 1420
DseDI GACNNNNNNGTC 1 cut(s) 161
EaeI YGGCCR 1 cut(s) 273
EagI CGGCCG 1 cut(s) 273
Eam1104I CTCTTC 3 cut(s) 50, 68, 680
Eam1105I GACNNNNNGTC 3 cut(s) 289, 766, 1420
EarI CTCTTC 3 cut(s) 50, 68, 680
EciI GGCGGA 3 cut(s) 115, 540, 1087
Ecl136II GAGCTC 1 cut(s) 860
EclXI CGGCCG 1 cut(s) 273
Eco24I GRGCYC 1 cut(s) 862
Eco31I GGTCTC 1 cut(s) 753
Eco47I GGWCC 1 cut(s) 370
Eco52I CGGCCG 1 cut(s) 273
Eco53kI GAGCTC 1 cut(s) 860
Eco88I CYCGRG 2 cut(s) 340, 763
EcoICRI GAGCTC 1 cut(s) 860
EcoT38I GRGCYC 1 cut(s) 862
FaeI CATG 7 cut(s) 133, 139, 169, 921, 973, 991, 1000
FaqI GGGAC 2 cut(s) 291, 907
FatI CATG 7 cut(s) 129, 135, 165, 917, 969, 987, 996
FauI CCCGC 3 cut(s) 957, 1048, 1612
FblI GTMKAC 2 cut(s) 255, 1318
Fnu4HI GCNGC 7 cut(s) 81, 88, 101, 140, 223, 533, 834
FokI GGATG 1 cut(s) 1174
FriOI GRGCYC 1 cut(s) 862
Fsp4HI GCNGC 7 cut(s) 81, 88, 101, 140, 223, 533, 834
FspBI CTAG 6 cut(s) 977, 981, 1146, 1376, 1412, 1481
GlaI GCGC 2 cut(s) 246, 922
GluI GCNGC 7 cut(s) 81, 88, 101, 140, 223, 533, 834
HaeII RGCGCY 1 cut(s) 248
HaeIII GGCC 1 cut(s) 275
HapII CCGG 9 cut(s) 84, 469, 720, 753, 783, 1041, 1079, 1091, 1550
HgaI GACGC 6 cut(s) 103, 148, 205, 279, 950, 1555
HhaI GCGC 2 cut(s) 247, 923
Hin1I GRCGYC 3 cut(s) 216, 290, 1547
Hin1II CATG 7 cut(s) 133, 139, 169, 921, 973, 991, 1000
Hin6I GCGC 2 cut(s) 245, 921
HinP1I GCGC 2 cut(s) 245, 921
HincII GTYRAC 3 cut(s) 256, 466, 664
HindII GTYRAC 3 cut(s) 256, 466, 664
HinfI GANTC 4 cut(s) 984, 1301, 1415, 1609
HpaII CCGG 9 cut(s) 84, 469, 720, 753, 783, 1041, 1079, 1091, 1550
HphI GGTGA 3 cut(s) 1004, 1028, 1329
Hpy166II GTNNAC 7 cut(s) 256, 319, 352, 466, 664, 1099, 1319
Hpy188I TCNGA 6 cut(s) 108, 188, 325, 777, 927, 1498
Hpy188III TCNNGA 6 cut(s) 342, 373, 730, 808, 1465, 1575
Hpy8I GTNNAC 7 cut(s) 256, 319, 352, 466, 664, 1099, 1319
Hpy99I CGWCG 6 cut(s) 119, 164, 287, 395, 944, 1549
HpyAV CCTTC 6 cut(s) 155, 396, 560, 1191, 1452, 1495
HpyCH4III ACNGT 3 cut(s) 1016, 1037, 1128
HpyCH4IV ACGT 8 cut(s) 285, 660, 737, 876, 1001, 1020, 1189, 1248
HpyCH4V TGCA 4 cut(s) 133, 139, 261, 1178
HpyF10VI GCNNNNNNNGC 5 cut(s) 139, 222, 272, 833, 1277
HpyF3I CTNAG 3 cut(s) 603, 837, 1273
HpySE526I ACGT 8 cut(s) 285, 660, 737, 876, 1001, 1020, 1189, 1248
Hsp92I GRCGYC 3 cut(s) 216, 290, 1547
Hsp92II CATG 7 cut(s) 133, 139, 169, 921, 973, 991, 1000
HspAI GCGC 2 cut(s) 245, 921
KpnI GGTACC 1 cut(s) 1053
KroI GCCGGC 2 cut(s) 83, 1549
KroNI GCCGGC 2 cut(s) 85, 1551
KspI CCGCGG 1 cut(s) 1056
Kzo9I GATC 6 cut(s) 344, 418, 447, 927, 1065, 1629
LmnI GCTCC 6 cut(s) 97, 147, 341, 857, 865, 1573
Lsp1109I GCAGC 3 cut(s) 87, 151, 845
MaeI CTAG 6 cut(s) 977, 981, 1146, 1376, 1412, 1481
MaeII ACGT 8 cut(s) 285, 660, 737, 876, 1001, 1020, 1189, 1248
MalI GATC 6 cut(s) 346, 420, 449, 929, 1067, 1631
MboI GATC 6 cut(s) 344, 418, 447, 927, 1065, 1629
MboII GAAGA 8 cut(s) 16, 37, 55, 667, 673, 745, 925, 977
MhlI GDGCHC 4 cut(s) 14, 338, 782, 862
MluCI AATT 5 cut(s) 1026, 1291, 1307, 1385, 1635
MlyI GAGTC 3 cut(s) 993, 1295, 1409
MmeI TCCRAC 2 cut(s) 219, 1189
MreI CGCCGGCG 1 cut(s) 83
MroNI GCCGGC 2 cut(s) 83, 1549
MseI TTAA 5 cut(s) 249, 879, 1025, 1353, 1506
MslI CAYNNNNRTG 1 cut(s) 134
MspA1I CMGCKG 3 cut(s) 791, 836, 1055
MspI CCGG 9 cut(s) 84, 469, 720, 753, 783, 1041, 1079, 1091, 1550
MspR9I CCNGG 3 cut(s) 753, 1079, 1091
Mva1269I GAATGC 1 cut(s) 1280
MvnI CGCG 3 cut(s) 159, 532, 1055
MwoI GCNNNNNNNGC 5 cut(s) 139, 222, 272, 833, 1277
NaeI GCCGGC 2 cut(s) 85, 1551
NciI CCSGG 3 cut(s) 753, 1079, 1091
NdeII GATC 6 cut(s) 344, 418, 447, 927, 1065, 1629
NgoMIV GCCGGC 2 cut(s) 83, 1549
NheI GCTAGC 1 cut(s) 1375
NlaIII CATG 7 cut(s) 133, 139, 169, 921, 973, 991, 1000
NlaIV GGNNCC 3 cut(s) 1039, 1051, 1076
NmeAIII GCCGAG 2 cut(s) 251, 301
NmuCI GTSAC 6 cut(s) 434, 611, 992, 1016, 1122, 1344
NspI RCATGY 3 cut(s) 139, 921, 973
PcsI WCGNNNNNNNCGW 2 cut(s) 159, 168
PctI GAATGC 1 cut(s) 1280
PdiI GCCGGC 2 cut(s) 85, 1551
PfeI GAWTC 1 cut(s) 1609
PflFI GACNNNGTC 1 cut(s) 158
PinAI ACCGGT 1 cut(s) 782
PkrI GCNGC 7 cut(s) 82, 89, 102, 141, 224, 534, 835
PleI GAGTC 3 cut(s) 992, 1295, 1409
PpsI GAGTC 3 cut(s) 992, 1295, 1409
Ppu21I YACGTR 1 cut(s) 1190
Psp124BI GAGCTC 1 cut(s) 862
Psp1406I AACGTT 1 cut(s) 660
PspN4I GGNNCC 3 cut(s) 1039, 1051, 1076
PspPI GGNCC 1 cut(s) 370
PsrI GAACNNNNNNTAC 4 cut(s) 623, 655, 1581, 1613
PstI CTGCAG 1 cut(s) 1180
PsyI GACNNNGTC 1 cut(s) 158
PvuII CAGCTG 1 cut(s) 836
RseI CAYNNNNRTG 1 cut(s) 134
SacI GAGCTC 1 cut(s) 862
SacII CCGCGG 1 cut(s) 1056
SalI GTCGAC 1 cut(s) 254
SaqAI TTAA 5 cut(s) 249, 879, 1025, 1353, 1506
SatI GCNGC 7 cut(s) 81, 88, 101, 140, 223, 533, 834
Sau3AI GATC 6 cut(s) 344, 418, 447, 927, 1065, 1629
Sau96I GGNCC 1 cut(s) 370
ScaI AGTACT 1 cut(s) 1182
SchI GAGTC 3 cut(s) 993, 1295, 1409
ScrFI CCNGG 3 cut(s) 753, 1079, 1091
SduI GDGCHC 4 cut(s) 14, 338, 782, 862
SfcI CTRYAG 1 cut(s) 1176
Sfr303I CCGCGG 1 cut(s) 1056
SgrAI CRCCGGYG 1 cut(s) 83
SgrBI CCGCGG 1 cut(s) 1056
SinI GGWCC 1 cut(s) 370
SmiMI CAYNNNNRTG 1 cut(s) 134
SmlI CTYRAG 1 cut(s) 806
SmoI CTYRAG 1 cut(s) 806
Sse9I AATT 5 cut(s) 1026, 1291, 1307, 1385, 1635
SspMI CTAG 6 cut(s) 977, 981, 1146, 1376, 1412, 1481
SstI GAGCTC 1 cut(s) 862
StyD4I CCNGG 3 cut(s) 751, 1077, 1089
TaaI ACNGT 3 cut(s) 1016, 1037, 1128
TaiI ACGT 8 cut(s) 288, 663, 740, 879, 1004, 1023, 1192, 1251
TaqI TCGA 6 cut(s) 171, 255, 450, 1131, 1391, 1466
TaqII GACCGA 1 cut(s) 1332
TasI AATT 5 cut(s) 1026, 1291, 1307, 1385, 1635
TatI WGTACW 2 cut(s) 318, 1180
TauI GCSGC 4 cut(s) 83, 90, 225, 535
TfiI GAWTC 1 cut(s) 1609
Tru1I TTAA 5 cut(s) 249, 879, 1025, 1353, 1506
Tru9I TTAA 5 cut(s) 249, 879, 1025, 1353, 1506
TscAI CASTG 3 cut(s) 959, 1180, 1518
TseFI GTSAC 6 cut(s) 434, 611, 992, 1016, 1122, 1344
TseI GCWGC 3 cut(s) 100, 139, 833
Tsp45I GTSAC 6 cut(s) 434, 611, 992, 1016, 1122, 1344
TspDTI ATGAA 8 cut(s) 17, 27, 37, 590, 667, 1434, 1484, 1589
TspGWI ACGGA 6 cut(s) 293, 408, 411, 1174, 1414, 1560
TspRI CASTG 3 cut(s) 959, 1180, 1518
Tth111I GACNNNGTC 1 cut(s) 158
VpaK11BI GGWCC 1 cut(s) 370
XapI RAATTY 1 cut(s) 1635
XceI RCATGY 3 cut(s) 139, 921, 973
XcmI CCANNNNNNNNNTGG 1 cut(s) 364
XmiI GTMKAC 2 cut(s) 255, 1318
XspI CTAG 6 cut(s) 977, 981, 1146, 1376, 1412, 1481
ZrmI AGTACT 1 cut(s) 1182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.