MD08G1017000.v1.1

Galactose oxidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0000556
Physical Location & Seq
Reverse (-)
1307988 .. 1309601
1614 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1017000.v1.1.491

Sequence Viewer

Length: 1614 bp
ATGAAGCCATTTACTAGTCTCATTCCTTCATTTCTGTTGTTAATAATATTTCATGGGTTCTCTCGGACGGCCCACGCTGCCGGTGGCAATTGGCAAGTGTTGGCAACCATTGGCGTTTCTGCCATGCACATGCAGCTCTTAAAAAATGACCGCATCGTCCTGTTCGACCGCACAGACTTCGGCACATCCAACTTGTCCTTGCCAAACGGTAATTGCGTCAACAATGACTGCACCGCCCACTCTGCCGAGTTCGTCGTCCAGACCAAAGCCTTCCGGCCCCTTACAGTCTTATCCGACGTCTGGTGCTCCTCCGGCTCCATGGCCCCCAACGGAAACTTAATCCAAACCGGTGGCTTCAATAGTGGAGAACGCCGCGTTAGAGTTTTCCAACCCTGCACGGGTTGTGATTGGACGGAGGTTGTGGACGGCTTGGCGGTTCGCCGTTGGTACGCCACCAATCATGTTCTGCCCGATGGACGCGAGATTATCATCGGCGGCCGGGGACAATTCAACTATGAATTTTATCCGAAGACCGACTCTACAAGCAATGTCTACAGCTTACCGTTCCTTTCGCAGACCAATGACGCCGGCCAAGAAAACAATCTATACCCTTTTGTTTTTCTCAACCCTGATGGCAACTTATTTATTTTCGCCAACAATCGAGCTATTTTGTTGGATTACCTGAAGAACGTCATCGTTAAAACCTACCCGCAAATACCCGGCGGCGACCCGAGGTGTTACCCTAGCTCGGGTTCAGCCGTGTTGCTGCCGTTAAAAAACTTGACGGCTCCGTCTGTTGAGGCTGAGGTTTTGGTTTGTGGTGGAGCTCCAAAAGGATCTTTTGTCCAGGCTAATAAGGGTACTTTTGTGGATGCTCTAAACACATGTGCTCGGATCAAAATAACCGACCCTAATCCACAGTGGATTGTTGAAACTATGCCTCAAGCTAGAGTCATGGGTGACATGTTATTGCTCCCAGACAGCACTGTTTTACTCATCAACGGTGCATCGTCTGGGGTTGCAGGTTGGGAAATTGGTCGTAACCCCGTTCTCAACCCAGTTGTGTACCGACCAGATAATGCATTTGGGTCAAGGTTCGAACAACAAAACCCCACCACCATACCGCGGATGTACCATTCCTCAGCATTATTGGTACGCGATGGTAGAGTGATCGTTGGAGGTAGTAACCCCCACGATAAGTACCAATTTGGCAGCAACGTGCTTTTTCCAACAGAATTTAGATTGGAGGCATTTAGTCCTGAGTATCTCGACGCCAAGTATGCGGATTTGCGTCCTACAATCATCAATCCCCTAAACCAAGCCAAAATCCATTACGGAAGAAAATTGACCGTTCAGTTCTCGCTTACGGGGACACTAGCAATGAATTCAGTGTTGGTGACGATGGTGGCGCCGCCTTTTAGCACACATTCGTTCTCCATGAATCAAAGGTTGTTGGTTCTTGGTGCAGAGAACGTACAAAAGGTAGGGCCAACAACGTATCAAGCTCAAGTGACGACACCGCCTTCAGTAAATCTTGCGCCTTCCGGATATTACATTTTGTATGTGGTTCATCAGCAAATACCAAGCGAGGGCATCTTTGTTCATATTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

538

Amino Acids

58.99

Weight (kDa)

8.05

Isoelectric Point (pI)

31.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 42 - 422 4.5e-176 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 431 - 536 3.1e-26 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000556)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19900 AT1G75620
fragaria_vesca FvH4_2g08320 FvH4_2g08340 FvH4_2g39130 FvH4_2g39150
malus_domestica MD08G1016600.v1.1 MD08G1016900.v1.1 MD08G1017000.v1.1 MD08G1082100.v1.1 MD13G1087700.v1.1 MD14G1007900.v1.1 MD15G1015700.v1.1 MD15G1015800.v1.1 MD15G1015900.v1.1 MD15G1016000.v1.1 MD15G1068600.v1.1 MD15G1068700.v1.1
prunus_persica Prupe.1G369700_v2.0.a1 Prupe.1G369800_v2.0.a1
pyrus_communis pycom08g01440 pycom08g01450 pycom08g01480 pycom15g01350
rosa_chinensis RchiOBHm_Chr4g0408881 RchiOBHm_Chr6g0263281 RchiOBHm_Chr6g0263301 RchiOBHm_Chr6g0263331 RchiOBHm_Chr6g0302251 RchiOBHm_Chr6g0302271 RchiOBHm_Chr6g0302321 RchiOBHm_Chr6g0302331
rosa_laevigata RLG00000008616 RLG00000011177 RLG00000011178 RLG00000011182 RLG00000014357 RLG00000014362 RLG00000014363 RLG00000014365 RLG00000018749
rosa_multiflora Rmu_co8182314.1_g000001 Rmu_co8224130.1_g000001 Rmu_co8328361.1_g000001 Rmu_co8367879.1_g000001 Rmu_sc0000310.1_g000016 Rmu_sc0000310.1_g000033 Rmu_sc0001855.1_g000020 Rmu_sc0002778.1_g000005 Rmu_sc0003089.1_g000001 Rmu_sc0003089.1_g000012 Rmu_sc0003089.1_g000021 Rmu_sc0003633.1_g000013 Rmu_sc0003633.1_g000022
rosa_roxburghii Rroxscaffold_176G00431040 Rroxscaffold_5G00353250 Rroxscaffold_7G00165850 Rroxscaffold_7G00165920 Rroxscaffold_7G00165930 Rroxscaffold_7G00204510 Rroxscaffold_7G00204560
rosa_rugosa Rorug02G0245300 Rorug04G0088500 Rorug06G0004200 Rorug06G0004300 Rorug06G0313500 Rorug06G0313600 Rorug06G0313700
rosa_samantha Rh4CG160500 Rh6AG123400 Rh6AG123700 Rh6AG124000 Rh6AG426200 Rh6AG426400 Rh6AG426600 Rh7CG259000
rosa_wichuraiana Rw4G012520 Rw6G010610 Rw6G010620 Rw6G010640 Rw6G010780 Rw6G036900 Rw6G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 155, 790
AatII GACGTC 1 cut(s) 300
Acc36I ACCTGC 1 cut(s) 1013
AccB1I GGYRCC 1 cut(s) 1408
AccI GTMKAC 1 cut(s) 552
AccII CGCG 4 cut(s) 375, 480, 1126, 1158
AccIII TCCGGA 1 cut(s) 1544
AclWI GGATC 2 cut(s) 844, 902
AcoI YGGCCR 2 cut(s) 496, 589
AcsI RAATTY 3 cut(s) 518, 1235, 1384
AcuI CTGAAG 2 cut(s) 704, 1509
AcyI GRCGYC 4 cut(s) 297, 585, 1272, 1409
AfaI GTAC 7 cut(s) 449, 862, 1067, 1133, 1155, 1202, 1476
AfiI CCNNNNNNNGG 6 cut(s) 300, 398, 748, 749, 1125, 1589
AflIII ACRYGT 2 cut(s) 884, 963
AgeI ACCGGT 1 cut(s) 347
AgsI TTSAA 3 cut(s) 358, 511, 932
AhlI ACTAGT 1 cut(s) 14
AjnI CCWGG 1 cut(s) 846
AjuI GAANNNNNNNTTGG 2 cut(s) 1376, 1408
AluBI AGCT 7 cut(s) 136, 558, 665, 747, 827, 947, 1505
AluI AGCT 7 cut(s) 136, 558, 665, 747, 827, 947, 1505
Alw21I GWGCWC 3 cut(s) 308, 829, 892
Alw26I GTCTC 1 cut(s) 23
AlwI GGATC 2 cut(s) 844, 902
Ama87I CYCGRG 2 cut(s) 730, 748
Aor13HI TCCGGA 1 cut(s) 1544
AoxI GGCC 6 cut(s) 69, 275, 321, 496, 589, 1487
ApeKI GCWGC 4 cut(s) 77, 133, 766, 1212
ApoI RAATTY 3 cut(s) 518, 1235, 1384
AsiGI ACCGGT 1 cut(s) 347
AspLEI GCGC 2 cut(s) 1411, 1540
AspS9I GGNCC 4 cut(s) 70, 276, 322, 1487
AsuC2I CCSGG 2 cut(s) 500, 720
AsuHPI GGTGA 2 cut(s) 971, 1408
AsuII TTCGAA 1 cut(s) 1098
AvaI CYCGRG 2 cut(s) 730, 748
BaeI ACNNNNGTAYC 2 cut(s) 852, 885
BanI GGYRCC 1 cut(s) 1408
BanII GRGCYC 1 cut(s) 829
BbsI GAAGAC 1 cut(s) 536
Bbv12I GWGCWC 3 cut(s) 308, 829, 892
BbvCI CCTCAGC 2 cut(s) 804, 1141
BbvI GCAGC 4 cut(s) 64, 145, 753, 1224
BccI CCATC 4 cut(s) 467, 626, 1154, 1396
BceAI ACGGC 6 cut(s) 84, 426, 442, 743, 754, 801
BcgI CGANNNNNNTGC 2 cut(s) 160, 194
BciT130I CCWGG 1 cut(s) 848
BcnI CCSGG 2 cut(s) 500, 720
BcoDI GTCTC 1 cut(s) 23
BcuI ACTAGT 1 cut(s) 14
BfaI CTAG 4 cut(s) 15, 744, 948, 1376
BfmI CTRYAG 1 cut(s) 553
BfoI RGCGCY 1 cut(s) 1412
BfuAI ACCTGC 1 cut(s) 1013
BisI GCNGC 8 cut(s) 78, 134, 373, 496, 724, 767, 1213, 1412
BlsI GCNGC 8 cut(s) 79, 135, 374, 497, 725, 768, 1214, 1413
Bme1390I CCNGG 3 cut(s) 500, 720, 848
BmeT110I CYCGRG 2 cut(s) 730, 748
BmgT120I GGNCC 4 cut(s) 70, 276, 322, 1487
BmiI GGNNCC 5 cut(s) 278, 316, 324, 789, 1410
BmrFI CCNGG 3 cut(s) 500, 720, 848
BmrI ACTGGG 1 cut(s) 1052
BmsI GCATC 4 cut(s) 162, 862, 1016, 1602
BmuI ACTGGG 1 cut(s) 1052
BpiI GAAGAC 1 cut(s) 536
Bpu10I CCTNAGC 2 cut(s) 804, 1141
Bpu14I TTCGAA 1 cut(s) 1098
BpuEI CTTGAG 2 cut(s) 927, 1491
BpuMI CCSGG 2 cut(s) 500, 720
BsaBI GATNNNNATC 1 cut(s) 488
BsaHI GRCGYC 4 cut(s) 297, 585, 1272, 1409
BsaJI CCNNGG 4 cut(s) 318, 499, 731, 1124
BsaWI WCCGGW 2 cut(s) 347, 1544
Bsc4I CCNNNNNNNGG 6 cut(s) 300, 398, 748, 749, 1125, 1589
Bse118I RCCGGY 3 cut(s) 80, 347, 587
Bse1I ACTGG 1 cut(s) 1058
Bse3DI GCAATG 2 cut(s) 553, 1386
Bse8I GATNNNNATC 1 cut(s) 488
BseAI TCCGGA 1 cut(s) 1544
BseBI CCWGG 1 cut(s) 848
BseDI CCNNGG 4 cut(s) 318, 499, 731, 1124
BseGI GGATG 3 cut(s) 185, 877, 1134
BseJI GATNNNNATC 1 cut(s) 488
BseLI CCNNNNNNNGG 6 cut(s) 300, 398, 748, 749, 1125, 1589
BseMI GCAATG 2 cut(s) 553, 1386
BseMII CTCAG 3 cut(s) 795, 1155, 1251
BseNI ACTGG 1 cut(s) 1058
BseRI GAGGAG 1 cut(s) 298
BseX3I CGGCCG 1 cut(s) 496
BseXI GCAGC 4 cut(s) 64, 145, 753, 1224
BsgI GTGCAG 3 cut(s) 214, 379, 1485
Bsh1236I CGCG 4 cut(s) 375, 480, 1126, 1158
Bsh1285I CGRYCG 2 cut(s) 169, 499
BshFI GGCC 6 cut(s) 71, 277, 323, 498, 591, 1489
BshNI GGYRCC 1 cut(s) 1408
BshTI ACCGGT 1 cut(s) 347
BsiEI CGRYCG 2 cut(s) 169, 499
BsiHKAI GWGCWC 3 cut(s) 308, 829, 892
BsiHKCI CYCGRG 2 cut(s) 730, 748
BsiSI CCGG 8 cut(s) 81, 274, 312, 348, 499, 588, 720, 1545
BslFI GGGAC 2 cut(s) 516, 1384
BslI CCNNNNNNNGG 6 cut(s) 300, 398, 748, 749, 1125, 1589
BsmAI GTCTC 1 cut(s) 23
BsmFI GGGAC 2 cut(s) 516, 1384
BsnI GGCC 6 cut(s) 71, 277, 323, 498, 591, 1489
BsoBI CYCGRG 2 cut(s) 730, 748
Bsp119I TTCGAA 1 cut(s) 1098
Bsp1286I GDGCHC 3 cut(s) 308, 829, 892
Bsp13I TCCGGA 1 cut(s) 1544
Bsp143I GATC 3 cut(s) 836, 894, 1170
Bsp19I CCATGG 1 cut(s) 318
BspANI GGCC 6 cut(s) 71, 277, 323, 498, 591, 1489
BspCNI CTCAG 3 cut(s) 796, 1154, 1252
BspEI TCCGGA 1 cut(s) 1544
BspFNI CGCG 4 cut(s) 375, 480, 1126, 1158
BspLI GGNNCC 5 cut(s) 278, 316, 324, 789, 1410
BspMI ACCTGC 1 cut(s) 1013
BspPI GGATC 2 cut(s) 844, 902
BspT104I TTCGAA 1 cut(s) 1098
BspT107I GGYRCC 1 cut(s) 1408
BsrDI GCAATG 2 cut(s) 553, 1386
BsrFI RCCGGY 3 cut(s) 80, 347, 587
BsrI ACTGG 1 cut(s) 1058
BssAI RCCGGY 3 cut(s) 80, 347, 587
BssECI CCNNGG 4 cut(s) 318, 499, 731, 1124
BssMI GATC 3 cut(s) 836, 894, 1170
BssNI GRCGYC 4 cut(s) 297, 585, 1272, 1409
BssT1I CCWWGG 1 cut(s) 318
Bst2UI CCWGG 1 cut(s) 848
Bst4CI ACNGT 7 cut(s) 209, 286, 564, 921, 988, 1004, 1351
BstACI GRCGYC 4 cut(s) 297, 585, 1272, 1409
BstBI TTCGAA 1 cut(s) 1098
BstC8I GCNNGC 1 cut(s) 589
BstDEI CTNAG 3 cut(s) 804, 1141, 1260
BstDSI CCRYGG 2 cut(s) 318, 1124
BstF5I GGATG 3 cut(s) 185, 877, 1134
BstFNI CGCG 4 cut(s) 375, 480, 1126, 1158
BstH2I RGCGCY 1 cut(s) 1412
BstHHI GCGC 2 cut(s) 1411, 1540
BstKTI GATC 3 cut(s) 839, 897, 1173
BstMAI GTCTC 1 cut(s) 23
BstMBI GATC 3 cut(s) 836, 894, 1170
BstMCI CGRYCG 2 cut(s) 169, 499
BstMWI GCNNNNNNNGC 5 cut(s) 77, 133, 242, 312, 1280
BstNI CCWGG 1 cut(s) 848
BstNSI RCATGY 3 cut(s) 133, 888, 967
BstSCI CCNGG 3 cut(s) 498, 718, 846
BstSFI CTRYAG 1 cut(s) 553
BstUI CGCG 4 cut(s) 375, 480, 1126, 1158
BstV1I GCAGC 4 cut(s) 64, 145, 753, 1224
BstV2I GAAGAC 1 cut(s) 536
BstX2I RGATCY 1 cut(s) 836
BstXI CCANNNNNNTGG 1 cut(s) 350
BstYI RGATCY 1 cut(s) 836
BstZI CGGCCG 1 cut(s) 496
BsuRI GGCC 6 cut(s) 71, 277, 323, 498, 591, 1489
BtgI CCRYGG 2 cut(s) 318, 1124
BtgZI GCGATG 1 cut(s) 1173
BtsCI GGATG 3 cut(s) 185, 877, 1134
BtsIMutI CAGTG 3 cut(s) 926, 984, 1395
BveI ACCTGC 1 cut(s) 1013
Cac8I GCNNGC 1 cut(s) 589
CfoI GCGC 2 cut(s) 1411, 1540
Cfr10I RCCGGY 3 cut(s) 80, 347, 587
Cfr13I GGNCC 4 cut(s) 70, 276, 322, 1487
Cfr42I CCGCGG 1 cut(s) 1127
CseI GACGC 5 cut(s) 205, 486, 593, 1280, 1280
Csp6I GTAC 7 cut(s) 448, 861, 1066, 1132, 1154, 1201, 1475
CspAI ACCGGT 1 cut(s) 347
CviAII CATG 9 cut(s) 53, 124, 130, 319, 461, 885, 955, 964, 1438
CviQI GTAC 7 cut(s) 448, 861, 1066, 1132, 1154, 1201, 1475
DdeI CTNAG 3 cut(s) 804, 1141, 1260
DinI GGCGCC 1 cut(s) 1410
DpnI GATC 3 cut(s) 838, 896, 1172
DpnII GATC 3 cut(s) 836, 894, 1170
DrdI GACNNNNNNGTC 2 cut(s) 155, 790
DseDI GACNNNNNNGTC 2 cut(s) 155, 790
EaeI YGGCCR 2 cut(s) 496, 589
EagI CGGCCG 1 cut(s) 496
Ecl136II GAGCTC 1 cut(s) 827
EclXI CGGCCG 1 cut(s) 496
Eco130I CCWWGG 1 cut(s) 318
Eco24I GRGCYC 1 cut(s) 829
Eco52I CGGCCG 1 cut(s) 496
Eco53kI GAGCTC 1 cut(s) 827
Eco57I CTGAAG 2 cut(s) 704, 1509
Eco88I CYCGRG 2 cut(s) 730, 748
EcoICRI GAGCTC 1 cut(s) 827
EcoRI GAATTC 1 cut(s) 1384
EcoRII CCWGG 1 cut(s) 846
EcoT14I CCWWGG 1 cut(s) 318
EcoT22I ATGCAT 1 cut(s) 1084
EcoT38I GRGCYC 1 cut(s) 829
EgeI GGCGCC 1 cut(s) 1410
EheI GGCGCC 1 cut(s) 1410
ErhI CCWWGG 1 cut(s) 318
FaeI CATG 9 cut(s) 56, 127, 133, 322, 464, 888, 958, 967, 1441
FaqI GGGAC 2 cut(s) 516, 1384
FatI CATG 9 cut(s) 52, 123, 129, 318, 460, 884, 954, 963, 1437
FauI CCCGC 1 cut(s) 717
FblI GTMKAC 1 cut(s) 552
Fnu4HI GCNGC 8 cut(s) 78, 134, 373, 496, 724, 767, 1213, 1412
FokI GGATG 3 cut(s) 172, 884, 1141
FriOI GRGCYC 1 cut(s) 829
Fsp4HI GCNGC 8 cut(s) 78, 134, 373, 496, 724, 767, 1213, 1412
FspBI CTAG 4 cut(s) 15, 744, 948, 1376
GlaI GCGC 2 cut(s) 1410, 1539
GluI GCNGC 8 cut(s) 78, 134, 373, 496, 724, 767, 1213, 1412
HaeII RGCGCY 1 cut(s) 1412
HaeIII GGCC 6 cut(s) 71, 277, 323, 498, 591, 1489
HapII CCGG 8 cut(s) 81, 274, 312, 348, 499, 588, 720, 1545
HgaI GACGC 5 cut(s) 205, 486, 593, 1280, 1280
HhaI GCGC 2 cut(s) 1411, 1540
Hin1I GRCGYC 4 cut(s) 297, 585, 1272, 1409
Hin1II CATG 9 cut(s) 56, 127, 133, 322, 464, 888, 958, 967, 1441
Hin6I GCGC 2 cut(s) 1409, 1538
HinP1I GCGC 2 cut(s) 1409, 1538
HincII GTYRAC 1 cut(s) 220
HindII GTYRAC 1 cut(s) 220
HinfI GANTC 3 cut(s) 536, 951, 1441
HpaII CCGG 8 cut(s) 81, 274, 312, 348, 499, 588, 720, 1545
HphI GGTGA 2 cut(s) 971, 1408
Hpy166II GTNNAC 4 cut(s) 220, 424, 553, 1066
Hpy188I TCNGA 4 cut(s) 66, 295, 528, 894
Hpy188III TCNNGA 4 cut(s) 259, 1259, 1268, 1545
Hpy8I GTNNAC 4 cut(s) 220, 424, 553, 1066
Hpy99I CGWCG 3 cut(s) 257, 299, 1274
HpyAV CCTTC 4 cut(s) 36, 280, 1533, 1551
HpyCH4III ACNGT 7 cut(s) 209, 286, 564, 921, 988, 1004, 1351
HpyCH4IV ACGT 5 cut(s) 297, 690, 1218, 1473, 1496
HpyCH4V TGCA 8 cut(s) 127, 133, 231, 396, 1007, 1022, 1082, 1466
HpyF10VI GCNNNNNNNGC 5 cut(s) 77, 133, 242, 312, 1280
HpyF3I CTNAG 3 cut(s) 804, 1141, 1260
HpySE526I ACGT 5 cut(s) 297, 690, 1218, 1473, 1496
Hsp92I GRCGYC 4 cut(s) 297, 585, 1272, 1409
Hsp92II CATG 9 cut(s) 56, 127, 133, 322, 464, 888, 958, 967, 1441
HspAI GCGC 2 cut(s) 1409, 1538
KasI GGCGCC 1 cut(s) 1408
Kpn2I TCCGGA 1 cut(s) 1544
KroI GCCGGC 1 cut(s) 587
KroNI GCCGGC 1 cut(s) 589
KspI CCGCGG 1 cut(s) 1127
Kzo9I GATC 3 cut(s) 836, 894, 1170
LmnI GCTCC 6 cut(s) 311, 320, 793, 824, 832, 978
Lsp1109I GCAGC 4 cut(s) 64, 145, 753, 1224
LweI GCATC 4 cut(s) 162, 862, 1016, 1602
MaeI CTAG 4 cut(s) 15, 744, 948, 1376
MaeII ACGT 5 cut(s) 297, 690, 1218, 1473, 1496
MaeIII GTNAC 6 cut(s) 737, 959, 1040, 1184, 1396, 1510
MalI GATC 3 cut(s) 838, 896, 1172
MboI GATC 3 cut(s) 836, 894, 1170
MboII GAAGA 3 cut(s) 541, 697, 1350
MfeI CAATTG 1 cut(s) 88
MflI RGATCY 1 cut(s) 836
MhlI GDGCHC 3 cut(s) 308, 829, 892
MluCI AATT 9 cut(s) 88, 211, 506, 518, 1032, 1205, 1235, 1343, 1384
Mly113I GGCGCC 1 cut(s) 1409
MlyI GAGTC 2 cut(s) 530, 960
MmeI TCCRAC 6 cut(s) 213, 318, 412, 654, 1156, 1253
Mph1103I ATGCAT 1 cut(s) 1084
MroI TCCGGA 1 cut(s) 1544
MroNI GCCGGC 1 cut(s) 587
MseI TTAA 5 cut(s) 41, 140, 338, 699, 773
MslI CAYNNNNRTG 1 cut(s) 128
MspA1I CMGCKG 1 cut(s) 1126
MspI CCGG 8 cut(s) 81, 274, 312, 348, 499, 588, 720, 1545
MspR9I CCNGG 3 cut(s) 500, 720, 848
MunI CAATTG 1 cut(s) 88
MvaI CCWGG 1 cut(s) 848
MvnI CGCG 4 cut(s) 375, 480, 1126, 1158
MwoI GCNNNNNNNGC 5 cut(s) 77, 133, 242, 312, 1280
NaeI GCCGGC 1 cut(s) 589
NarI GGCGCC 1 cut(s) 1409
NciI CCSGG 2 cut(s) 500, 720
NcoI CCATGG 1 cut(s) 318
NdeII GATC 3 cut(s) 836, 894, 1170
NgoMIV GCCGGC 1 cut(s) 587
NlaIII CATG 9 cut(s) 56, 127, 133, 322, 464, 888, 958, 967, 1441
NlaIV GGNNCC 5 cut(s) 278, 316, 324, 789, 1410
NmeAIII GCCGAG 1 cut(s) 271
NmuCI GTSAC 3 cut(s) 959, 1396, 1510
NsiI ATGCAT 1 cut(s) 1084
NspI RCATGY 3 cut(s) 133, 888, 967
NspV TTCGAA 1 cut(s) 1098
PciI ACATGT 2 cut(s) 884, 963
PcsI WCGNNNNNNNCGW 2 cut(s) 162, 213
PdiI GCCGGC 1 cut(s) 589
PfeI GAWTC 1 cut(s) 1441
PinAI ACCGGT 1 cut(s) 347
PkrI GCNGC 8 cut(s) 79, 135, 374, 497, 725, 768, 1214, 1413
PleI GAGTC 2 cut(s) 530, 959
PluTI GGCGCC 1 cut(s) 1412
PpsI GAGTC 2 cut(s) 530, 959
PscI ACATGT 2 cut(s) 884, 963
Psp124BI GAGCTC 1 cut(s) 829
Psp6I CCWGG 1 cut(s) 846
PspGI CCWGG 1 cut(s) 846
PspN4I GGNNCC 5 cut(s) 278, 316, 324, 789, 1410
PspPI GGNCC 4 cut(s) 70, 276, 322, 1487
PsuI RGATCY 1 cut(s) 836
RsaI GTAC 7 cut(s) 449, 862, 1067, 1133, 1155, 1202, 1476
RsaNI GTAC 7 cut(s) 448, 861, 1066, 1132, 1154, 1201, 1475
RseI CAYNNNNRTG 1 cut(s) 128
SacI GAGCTC 1 cut(s) 829
SacII CCGCGG 1 cut(s) 1127
SaqAI TTAA 5 cut(s) 41, 140, 338, 699, 773
SatI GCNGC 8 cut(s) 78, 134, 373, 496, 724, 767, 1213, 1412
Sau3AI GATC 3 cut(s) 836, 894, 1170
Sau96I GGNCC 4 cut(s) 70, 276, 322, 1487
SchI GAGTC 2 cut(s) 530, 960
ScrFI CCNGG 3 cut(s) 500, 720, 848
SduI GDGCHC 3 cut(s) 308, 829, 892
SfaNI GCATC 4 cut(s) 162, 862, 1016, 1602
SfcI CTRYAG 1 cut(s) 553
SfoI GGCGCC 1 cut(s) 1410
Sfr303I CCGCGG 1 cut(s) 1127
SfuI TTCGAA 1 cut(s) 1098
SgrBI CCGCGG 1 cut(s) 1127
SmiMI CAYNNNNRTG 1 cut(s) 128
SmlI CTYRAG 2 cut(s) 942, 1506
SmoI CTYRAG 2 cut(s) 942, 1506
SpeI ACTAGT 1 cut(s) 14
Sse9I AATT 9 cut(s) 88, 211, 506, 518, 1032, 1205, 1235, 1343, 1384
SspDI GGCGCC 1 cut(s) 1408
SspI AATATT 1 cut(s) 48
SspMI CTAG 4 cut(s) 15, 744, 948, 1376
SstI GAGCTC 1 cut(s) 829
StyD4I CCNGG 3 cut(s) 498, 718, 846
StyI CCWWGG 1 cut(s) 318
TaaI ACNGT 7 cut(s) 209, 286, 564, 921, 988, 1004, 1351
TaiI ACGT 5 cut(s) 300, 693, 1221, 1476, 1499
TaqI TCGA 4 cut(s) 165, 661, 1098, 1269
TaqII GACCGA 1 cut(s) 548
TasI AATT 9 cut(s) 88, 211, 506, 518, 1032, 1205, 1235, 1343, 1384
TauI GCSGC 4 cut(s) 375, 498, 726, 1414
TfiI GAWTC 1 cut(s) 1441
Tru1I TTAA 5 cut(s) 41, 140, 338, 699, 773
Tru9I TTAA 5 cut(s) 41, 140, 338, 699, 773
TscAI CASTG 3 cut(s) 926, 991, 1395
TseFI GTSAC 3 cut(s) 959, 1396, 1510
TseI GCWGC 4 cut(s) 77, 133, 766, 1212
Tsp45I GTSAC 3 cut(s) 959, 1396, 1510
TspDTI ATGAA 8 cut(s) 17, 18, 41, 531, 1397, 1454, 1559, 1592
TspGWI ACGGA 4 cut(s) 345, 428, 780, 1350
TspRI CASTG 3 cut(s) 926, 991, 1395
XapI RAATTY 3 cut(s) 518, 1235, 1384
XceI RCATGY 3 cut(s) 133, 888, 967
XcmI CCANNNNNNNNNTGG 1 cut(s) 80
XmiI GTMKAC 1 cut(s) 552
XspI CTAG 4 cut(s) 15, 744, 948, 1376
ZraI GACGTC 1 cut(s) 298
Zsp2I ATGCAT 1 cut(s) 1084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.