MD15G1015900.v1.1

Galactose oxidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000556
Physical Location & Seq
Reverse (-)
932631 .. 934241
1611 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1015900.v1.1.491

Sequence Viewer

Length: 1611 bp
ATGAAGACAATTAGTCTCATTGATCTTTCACTTCTGCTGTTAACATTTAATTTCTCTGTTCTGACGGCCCACGCTGCCGGTGGCAAATGGCAAGTGTTGAAAAACGTTGGCATTTCCGCCATGCACATGCAGCTCTTCAAAAACGACCGCATCGTCATGTTCGACCGCACCGACTTCGGCAAATCCAACTTGTCTTTAGCCAATGGTAACTGTGTCAACAACGACTGCACCGCCCACTCCGCCGAGTTCGTCGTCCAAACCAATGCCCTCCGCCCGCTCACGGTCTTGTCCGACGTCTGGTGCTCCTCCGGTTCAATGGACGCCTACGGAAACTTAATCCAAACCGGCGGCTTCAACAGTGGAGAGCGCCGCGTTAGAGTTTTCACGCCCTGCACGGGTTGTGATTGGAAAGAAACTGTGGACGGTTTAGCCGTTCGCCGTTGGTACGCCACTAATCATATGCTGCCCGATGGACGCGAGATTATCATTGGCGGCAGGGGGCAGTTCAACTATGAATTTTCTCCGAAGACCGAGTCTACAAGCAATGTCTACAGCTTGCCGTTCCTTTCGCAGACCAATGACCCTGGCCAAGAAAACAATCTATACCCTTTTGTTTTTCTCAACCCCGATGGCAACTTATTTATTTTCGCTAACAATCGAGCTATTTTGTTGGATTACGTGAAGAACGCCGTCGTCAAAACCTACCCGCAAATACCCGGCGGCGACCCGAGGTCTTACCCTAGCACGGGTTCAGCCGTGTTGCTGCCGTTAAAAAACTTGACGGCTCCAGCTGTTGAGGCTGAGGTTTTGGTTTGCGGTGGAGCTCCAAAAGGGTCTTTTTCCCAGGCAAATAAGGGTGTTTTTGTGGAAGCTCTAAACACATGCGCTCGGATCAAAATAACGGACCCTAATCCACAGTGGATTGTTGAAACCATGCCTCAAGCCAGGGTCATGGGTGACATGATATTGCTCCCTGACAGCACTGTTTTAATCATTAACGGTGCATCGTCTGGAGCTGCGGGTTGGGAAATCGGGCGTAATCCCGTTCTCAACCCAGTTGTGTACCAACCTGATAATGCAATCGGGTCACGGTTCGAACAACAAAACCCTACGACTATACCGCGAATGTACCATTCCTCAGCATTATTGGTACGTGACGGTAGAGTAGTCGTGGGAGGTAGTAACCCCCACGACAAATACCAGTTTGGCAGCAACGTGCTTTTCCCAACAGAATTGAGGTTAGAGGCATTTAGTCCTGAGTATCTCGATGCTAAATATGCGGATTTGCGTCCTACAATCATTGCGCCCCGAAACCAAGCCAAAATCCGTTATGGAAGAAAGTTAACCGTTCAATTCTCGCTTGCGGGCAGGTTTGCAATGAATTCAGTGTCAGTGACGATGGTGGCTCCTCCATTTAGCACGCATTCATTCTCGATGAATCAAAGGTTGTTGGTTCTGGGTGCAGAGAACACACATCAGGTAGGGCCAACAACGTATGAAGCTCAAGTGACGACGCCACCTTCGGGAAATCTCGCGCCTTCCGGATACTACATTTTGTACGTGGTTCATCAGCAAATTCCAAGTGAGGGCATCTTTGTTAAAATTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

537

Amino Acids

58.76

Weight (kDa)

8.35

Isoelectric Point (pI)

29.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 41 - 421 1.6e-176 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 430 - 535 1.6e-27 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000556)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19900 AT1G75620
fragaria_vesca FvH4_2g08320 FvH4_2g08340 FvH4_2g39130 FvH4_2g39150
malus_domestica MD08G1016600.v1.1 MD08G1016900.v1.1 MD08G1017000.v1.1 MD08G1082100.v1.1 MD13G1087700.v1.1 MD14G1007900.v1.1 MD15G1015700.v1.1 MD15G1015800.v1.1 MD15G1015900.v1.1 MD15G1016000.v1.1 MD15G1068600.v1.1 MD15G1068700.v1.1
prunus_persica Prupe.1G369700_v2.0.a1 Prupe.1G369800_v2.0.a1
pyrus_communis pycom08g01440 pycom08g01450 pycom08g01480 pycom15g01350
rosa_chinensis RchiOBHm_Chr4g0408881 RchiOBHm_Chr6g0263281 RchiOBHm_Chr6g0263301 RchiOBHm_Chr6g0263331 RchiOBHm_Chr6g0302251 RchiOBHm_Chr6g0302271 RchiOBHm_Chr6g0302321 RchiOBHm_Chr6g0302331
rosa_laevigata RLG00000008616 RLG00000011177 RLG00000011178 RLG00000011182 RLG00000014357 RLG00000014362 RLG00000014363 RLG00000014365 RLG00000018749
rosa_multiflora Rmu_co8182314.1_g000001 Rmu_co8224130.1_g000001 Rmu_co8328361.1_g000001 Rmu_co8367879.1_g000001 Rmu_sc0000310.1_g000016 Rmu_sc0000310.1_g000033 Rmu_sc0001855.1_g000020 Rmu_sc0002778.1_g000005 Rmu_sc0003089.1_g000001 Rmu_sc0003089.1_g000012 Rmu_sc0003089.1_g000021 Rmu_sc0003633.1_g000013 Rmu_sc0003633.1_g000022
rosa_roxburghii Rroxscaffold_176G00431040 Rroxscaffold_5G00353250 Rroxscaffold_7G00165850 Rroxscaffold_7G00165920 Rroxscaffold_7G00165930 Rroxscaffold_7G00204510 Rroxscaffold_7G00204560
rosa_rugosa Rorug02G0245300 Rorug04G0088500 Rorug06G0004200 Rorug06G0004300 Rorug06G0313500 Rorug06G0313600 Rorug06G0313700
rosa_samantha Rh4CG160500 Rh6AG123400 Rh6AG123700 Rh6AG124000 Rh6AG426200 Rh6AG426400 Rh6AG426600 Rh7CG259000
rosa_wichuraiana Rw4G012520 Rw6G010610 Rw6G010620 Rw6G010640 Rw6G010780 Rw6G036900 Rw6G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 152
AatII GACGTC 1 cut(s) 297
Acc36I ACCTGC 1 cut(s) 1359
AccBSI CCGCTC 1 cut(s) 277
AccI GTMKAC 2 cut(s) 536, 549
AccII CGCG 4 cut(s) 372, 477, 1123, 1535
AccIII TCCGGA 1 cut(s) 1541
AclI AACGTT 1 cut(s) 105
AclWI GGATC 1 cut(s) 899
AcoI YGGCCR 1 cut(s) 586
AcsI RAATTY 4 cut(s) 515, 1381, 1575, 1602
AcyI GRCGYC 3 cut(s) 294, 321, 1514
AfaI GTAC 5 cut(s) 446, 1064, 1130, 1152, 1559
AfiI CCNNNNNNNGG 7 cut(s) 280, 297, 395, 745, 746, 1523, 1586
AgsI TTSAA 7 cut(s) 100, 139, 315, 355, 508, 929, 1352
AhdI GACNNNNNGTC 2 cut(s) 12, 730
AjnI CCWGG 3 cut(s) 583, 843, 944
AluBI AGCT 8 cut(s) 133, 555, 662, 791, 824, 872, 1016, 1502
AluI AGCT 8 cut(s) 133, 555, 662, 791, 824, 872, 1016, 1502
Alw21I GWGCWC 2 cut(s) 305, 826
Alw26I GTCTC 1 cut(s) 20
AlwI GGATC 1 cut(s) 899
Ama87I CYCGRG 1 cut(s) 727
Aor13HI TCCGGA 1 cut(s) 1541
AoxI GGCC 3 cut(s) 66, 586, 1484
ApeKI GCWGC 6 cut(s) 74, 130, 463, 763, 1016, 1209
ApoI RAATTY 4 cut(s) 515, 1381, 1575, 1602
ArsI GACNNNNNNTTYG 4 cut(s) 518, 550, 1504, 1536
AspLEI GCGC 4 cut(s) 369, 887, 1306, 1537
AspS9I GGNCC 3 cut(s) 67, 904, 1484
AsuC2I CCSGG 1 cut(s) 717
AsuHPI GGTGA 1 cut(s) 968
AsuII TTCGAA 1 cut(s) 1095
AvaI CYCGRG 1 cut(s) 727
AvaII GGWCC 1 cut(s) 904
BalI TGGCCA 1 cut(s) 588
BanII GRGCYC 1 cut(s) 826
BbsI GAAGAC 2 cut(s) 11, 533
Bbv12I GWGCWC 2 cut(s) 305, 826
BbvCI CCTCAGC 2 cut(s) 801, 1138
BbvI GCAGC 6 cut(s) 61, 142, 450, 750, 1003, 1221
BccI CCATC 3 cut(s) 464, 623, 1393
BceAI ACGGC 8 cut(s) 81, 416, 423, 544, 674, 740, 751, 798
BcgI CGANNNNNNTGC 2 cut(s) 157, 191
BciT130I CCWGG 3 cut(s) 585, 845, 946
BciVI GTATCC 1 cut(s) 1538
BcnI CCSGG 1 cut(s) 717
BcoDI GTCTC 1 cut(s) 20
BfaI CTAG 1 cut(s) 741
BfmI CTRYAG 1 cut(s) 550
BfoI RGCGCY 1 cut(s) 370
BfuAI ACCTGC 1 cut(s) 1359
BfuI GTATCC 1 cut(s) 1538
Bme1390I CCNGG 4 cut(s) 585, 717, 845, 946
Bme18I GGWCC 1 cut(s) 904
BmeRI GACNNNNNGTC 2 cut(s) 12, 730
BmeT110I CYCGRG 1 cut(s) 727
BmgT120I GGNCC 3 cut(s) 67, 904, 1484
BmiI GGNNCC 3 cut(s) 786, 906, 1407
BmrFI CCNGG 4 cut(s) 585, 717, 845, 946
BmrI ACTGGG 1 cut(s) 1049
BmsI GCATC 4 cut(s) 159, 1013, 1258, 1599
BmuI ACTGGG 1 cut(s) 1049
BpiI GAAGAC 2 cut(s) 11, 533
BpmI CTGGAG 2 cut(s) 771, 1032
Bpu10I CCTNAGC 2 cut(s) 801, 1138
Bpu14I TTCGAA 1 cut(s) 1095
BpuEI CTTGAG 2 cut(s) 924, 1488
BpuMI CCSGG 1 cut(s) 717
BsaAI YACGTR 3 cut(s) 679, 1154, 1561
BsaHI GRCGYC 3 cut(s) 294, 321, 1514
BsaJI CCNNGG 4 cut(s) 583, 728, 843, 945
BsaWI WCCGGW 2 cut(s) 308, 1541
Bsc4I CCNNNNNNNGG 7 cut(s) 280, 297, 395, 745, 746, 1523, 1586
Bse118I RCCGGY 2 cut(s) 77, 344
Bse1I ACTGG 2 cut(s) 1055, 1201
Bse3DI GCAATG 3 cut(s) 550, 1299, 1383
BseAI TCCGGA 1 cut(s) 1541
BseBI CCWGG 3 cut(s) 585, 845, 946
BseDI CCNNGG 4 cut(s) 583, 728, 843, 945
BseLI CCNNNNNNNGG 7 cut(s) 280, 297, 395, 745, 746, 1523, 1586
BseMI GCAATG 3 cut(s) 550, 1299, 1383
BseMII CTCAG 3 cut(s) 792, 1152, 1248
BseNI ACTGG 2 cut(s) 1055, 1201
BseRI GAGGAG 2 cut(s) 295, 1398
BseXI GCAGC 6 cut(s) 61, 142, 450, 750, 1003, 1221
BsgI GTGCAG 3 cut(s) 211, 376, 1482
Bsh1236I CGCG 4 cut(s) 372, 477, 1123, 1535
Bsh1285I CGRYCG 2 cut(s) 148, 166
BshFI GGCC 3 cut(s) 68, 588, 1486
BsiEI CGRYCG 2 cut(s) 148, 166
BsiHKAI GWGCWC 2 cut(s) 305, 826
BsiHKCI CYCGRG 1 cut(s) 727
BsiSI CCGG 5 cut(s) 78, 309, 345, 717, 1542
BslI CCNNNNNNNGG 7 cut(s) 280, 297, 395, 745, 746, 1523, 1586
BsmAI GTCTC 1 cut(s) 20
BsmI GAATGC 1 cut(s) 1423
BsnI GGCC 3 cut(s) 68, 588, 1486
BsoBI CYCGRG 1 cut(s) 727
Bsp119I TTCGAA 1 cut(s) 1095
Bsp1286I GDGCHC 2 cut(s) 305, 826
Bsp13I TCCGGA 1 cut(s) 1541
Bsp143I GATC 2 cut(s) 22, 891
BspANI GGCC 3 cut(s) 68, 588, 1486
BspCNI CTCAG 3 cut(s) 793, 1151, 1249
BspEI TCCGGA 1 cut(s) 1541
BspFNI CGCG 4 cut(s) 372, 477, 1123, 1535
BspLI GGNNCC 3 cut(s) 786, 906, 1407
BspMI ACCTGC 1 cut(s) 1359
BspPI GGATC 1 cut(s) 899
BspQI GCTCTTC 1 cut(s) 140
BspT104I TTCGAA 1 cut(s) 1095
BsrBI CCGCTC 1 cut(s) 277
BsrDI GCAATG 3 cut(s) 550, 1299, 1383
BsrFI RCCGGY 2 cut(s) 77, 344
BsrI ACTGG 2 cut(s) 1055, 1201
BssAI RCCGGY 2 cut(s) 77, 344
BssECI CCNNGG 4 cut(s) 583, 728, 843, 945
BssMI GATC 2 cut(s) 22, 891
BssNI GRCGYC 3 cut(s) 294, 321, 1514
Bst2UI CCWGG 3 cut(s) 585, 845, 946
Bst6I CTCTTC 1 cut(s) 140
BstACI GRCGYC 3 cut(s) 294, 321, 1514
BstBAI YACGTR 3 cut(s) 679, 1154, 1561
BstBI TTCGAA 1 cut(s) 1095
BstC8I GCNNGC 5 cut(s) 275, 557, 1362, 1366, 1421
BstDEI CTNAG 3 cut(s) 801, 1138, 1257
BstFNI CGCG 4 cut(s) 372, 477, 1123, 1535
BstH2I RGCGCY 1 cut(s) 370
BstHHI GCGC 4 cut(s) 369, 887, 1306, 1537
BstKTI GATC 2 cut(s) 25, 894
BstMAI GTCTC 1 cut(s) 20
BstMBI GATC 2 cut(s) 22, 891
BstMCI CGRYCG 2 cut(s) 148, 166
BstMWI GCNNNNNNNGC 5 cut(s) 74, 130, 239, 797, 1277
BstNI CCWGG 3 cut(s) 585, 845, 946
BstNSI RCATGY 2 cut(s) 130, 885
BstSCI CCNGG 4 cut(s) 583, 715, 843, 944
BstSFI CTRYAG 1 cut(s) 550
BstUI CGCG 4 cut(s) 372, 477, 1123, 1535
BstV1I GCAGC 6 cut(s) 61, 142, 450, 750, 1003, 1221
BstV2I GAAGAC 2 cut(s) 11, 533
BstXI CCANNNNNNTGG 1 cut(s) 952
BsuI GTATCC 1 cut(s) 1538
BsuRI GGCC 3 cut(s) 68, 588, 1486
BtsIMutI CAGTG 5 cut(s) 364, 923, 981, 1392, 1398
BveI ACCTGC 1 cut(s) 1359
Cac8I GCNNGC 5 cut(s) 275, 557, 1362, 1366, 1421
CfoI GCGC 4 cut(s) 369, 887, 1306, 1537
Cfr10I RCCGGY 2 cut(s) 77, 344
Cfr13I GGNCC 3 cut(s) 67, 904, 1484
CseI GACGC 4 cut(s) 329, 483, 1277, 1522
Csp6I GTAC 5 cut(s) 445, 1063, 1129, 1151, 1558
CviAII CATG 7 cut(s) 121, 127, 157, 882, 934, 952, 961
CviQI GTAC 5 cut(s) 445, 1063, 1129, 1151, 1558
DdeI CTNAG 3 cut(s) 801, 1138, 1257
DpnI GATC 2 cut(s) 24, 893
DpnII GATC 2 cut(s) 22, 891
DrdI GACNNNNNNGTC 1 cut(s) 152
DriI GACNNNNNGTC 2 cut(s) 12, 730
DseDI GACNNNNNNGTC 1 cut(s) 152
EaeI YGGCCR 1 cut(s) 586
Eam1104I CTCTTC 1 cut(s) 140
Eam1105I GACNNNNNGTC 2 cut(s) 12, 730
EarI CTCTTC 1 cut(s) 140
EciI GGCGGA 3 cut(s) 106, 229, 260
Ecl136II GAGCTC 1 cut(s) 824
Eco24I GRGCYC 1 cut(s) 826
Eco47I GGWCC 1 cut(s) 904
Eco53kI GAGCTC 1 cut(s) 824
Eco88I CYCGRG 1 cut(s) 727
EcoICRI GAGCTC 1 cut(s) 824
EcoRI GAATTC 1 cut(s) 1381
EcoRII CCWGG 3 cut(s) 583, 843, 944
EcoT38I GRGCYC 1 cut(s) 826
FaeI CATG 7 cut(s) 124, 130, 160, 885, 937, 955, 964
FatI CATG 7 cut(s) 120, 126, 156, 881, 933, 951, 960
FauI CCCGC 4 cut(s) 282, 714, 1012, 1357
FauNDI CATATG 1 cut(s) 459
FblI GTMKAC 2 cut(s) 536, 549
FriOI GRGCYC 1 cut(s) 826
FspBI CTAG 1 cut(s) 741
GlaI GCGC 4 cut(s) 368, 886, 1305, 1536
GsuI CTGGAG 2 cut(s) 771, 1032
HaeII RGCGCY 1 cut(s) 370
HaeIII GGCC 3 cut(s) 68, 588, 1486
HapII CCGG 5 cut(s) 78, 309, 345, 717, 1542
HgaI GACGC 4 cut(s) 329, 483, 1277, 1522
HhaI GCGC 4 cut(s) 369, 887, 1306, 1537
Hin1I GRCGYC 3 cut(s) 294, 321, 1514
Hin1II CATG 7 cut(s) 124, 130, 160, 885, 937, 955, 964
Hin6I GCGC 4 cut(s) 367, 885, 1304, 1535
HinP1I GCGC 4 cut(s) 367, 885, 1304, 1535
HincII GTYRAC 3 cut(s) 42, 217, 1344
HindII GTYRAC 3 cut(s) 42, 217, 1344
HinfI GANTC 2 cut(s) 533, 1438
HpaI GTTAAC 2 cut(s) 42, 1344
HpaII CCGG 5 cut(s) 78, 309, 345, 717, 1542
HphI GGTGA 1 cut(s) 968
Hpy166II GTNNAC 7 cut(s) 42, 217, 421, 537, 550, 1063, 1344
Hpy188I TCNGA 4 cut(s) 63, 292, 525, 891
Hpy188III TCNNGA 6 cut(s) 1011, 1256, 1265, 1432, 1524, 1542
Hpy8I GTNNAC 7 cut(s) 42, 217, 421, 537, 550, 1063, 1344
Hpy99I CGWCG 4 cut(s) 254, 296, 695, 1516
HpyAV CCTTC 2 cut(s) 1530, 1548
HpyCH4IV ACGT 7 cut(s) 105, 294, 678, 1153, 1215, 1493, 1560
HpyCH4V TGCA 8 cut(s) 124, 130, 228, 393, 1004, 1079, 1376, 1463
HpyF10VI GCNNNNNNNGC 5 cut(s) 74, 130, 239, 797, 1277
HpyF3I CTNAG 3 cut(s) 801, 1138, 1257
HpySE526I ACGT 7 cut(s) 105, 294, 678, 1153, 1215, 1493, 1560
Hsp92I GRCGYC 3 cut(s) 294, 321, 1514
Hsp92II CATG 7 cut(s) 124, 130, 160, 885, 937, 955, 964
HspAI GCGC 4 cut(s) 367, 885, 1304, 1535
Kpn2I TCCGGA 1 cut(s) 1541
KspAI GTTAAC 2 cut(s) 42, 1344
Kzo9I GATC 2 cut(s) 22, 891
LguI GCTCTTC 1 cut(s) 140
LmnI GCTCC 7 cut(s) 308, 790, 821, 829, 975, 1013, 1411
Lsp1109I GCAGC 6 cut(s) 61, 142, 450, 750, 1003, 1221
LweI GCATC 4 cut(s) 159, 1013, 1258, 1599
MaeI CTAG 1 cut(s) 741
MaeII ACGT 7 cut(s) 105, 294, 678, 1153, 1215, 1493, 1560
MaeIII GTNAC 7 cut(s) 206, 956, 1086, 1154, 1181, 1393, 1507
MalI GATC 2 cut(s) 24, 893
MbiI CCGCTC 1 cut(s) 277
MboI GATC 2 cut(s) 22, 891
MboII GAAGA 5 cut(s) 16, 127, 538, 694, 1347
MhlI GDGCHC 2 cut(s) 305, 826
MlsI TGGCCA 1 cut(s) 588
MluCI AATT 8 cut(s) 9, 49, 515, 1232, 1352, 1381, 1575, 1602
MluNI TGGCCA 1 cut(s) 588
MlyI GAGTC 1 cut(s) 542
MmeI TCCRAC 3 cut(s) 210, 315, 651
Mox20I TGGCCA 1 cut(s) 588
MroI TCCGGA 1 cut(s) 1541
MscI TGGCCA 1 cut(s) 588
MseI TTAA 8 cut(s) 41, 48, 335, 770, 989, 996, 1343, 1599
MslI CAYNNNNRTG 2 cut(s) 125, 155
Msp20I TGGCCA 1 cut(s) 588
MspA1I CMGCKG 1 cut(s) 791
MspI CCGG 5 cut(s) 78, 309, 345, 717, 1542
MspR9I CCNGG 4 cut(s) 585, 717, 845, 946
Mva1269I GAATGC 1 cut(s) 1423
MvaI CCWGG 3 cut(s) 585, 845, 946
MvnI CGCG 4 cut(s) 372, 477, 1123, 1535
MwoI GCNNNNNNNGC 5 cut(s) 74, 130, 239, 797, 1277
NciI CCSGG 1 cut(s) 717
NdeI CATATG 1 cut(s) 459
NdeII GATC 2 cut(s) 22, 891
NlaIII CATG 7 cut(s) 124, 130, 160, 885, 937, 955, 964
NlaIV GGNNCC 3 cut(s) 786, 906, 1407
NmeAIII GCCGAG 1 cut(s) 268
NmuCI GTSAC 5 cut(s) 956, 1086, 1154, 1393, 1507
NspI RCATGY 2 cut(s) 130, 885
NspV TTCGAA 1 cut(s) 1095
PciSI GCTCTTC 1 cut(s) 140
PcsI WCGNNNNNNNCGW 4 cut(s) 150, 159, 168, 429
PctI GAATGC 1 cut(s) 1423
PfeI GAWTC 1 cut(s) 1438
PflFI GACNNNGTC 1 cut(s) 532
PleI GAGTC 1 cut(s) 541
PpsI GAGTC 1 cut(s) 541
Ppu21I YACGTR 3 cut(s) 679, 1154, 1561
Psp124BI GAGCTC 1 cut(s) 826
Psp1406I AACGTT 1 cut(s) 105
Psp6I CCWGG 3 cut(s) 583, 843, 944
PspGI CCWGG 3 cut(s) 583, 843, 944
PspN4I GGNNCC 3 cut(s) 786, 906, 1407
PspPI GGNCC 3 cut(s) 67, 904, 1484
PsyI GACNNNGTC 1 cut(s) 532
PvuII CAGCTG 1 cut(s) 791
RsaI GTAC 5 cut(s) 446, 1064, 1130, 1152, 1559
RsaNI GTAC 5 cut(s) 445, 1063, 1129, 1151, 1558
RseI CAYNNNNRTG 2 cut(s) 125, 155
SacI GAGCTC 1 cut(s) 826
SapI GCTCTTC 1 cut(s) 140
SaqAI TTAA 8 cut(s) 41, 48, 335, 770, 989, 996, 1343, 1599
Sau3AI GATC 2 cut(s) 22, 891
Sau96I GGNCC 3 cut(s) 67, 904, 1484
SchI GAGTC 1 cut(s) 542
ScrFI CCNGG 4 cut(s) 585, 717, 845, 946
SduI GDGCHC 2 cut(s) 305, 826
SfaNI GCATC 4 cut(s) 159, 1013, 1258, 1599
SfcI CTRYAG 1 cut(s) 550
SfuI TTCGAA 1 cut(s) 1095
SinI GGWCC 1 cut(s) 904
SmiMI CAYNNNNRTG 2 cut(s) 125, 155
SmlI CTYRAG 2 cut(s) 939, 1503
SmoI CTYRAG 2 cut(s) 939, 1503
Sse9I AATT 8 cut(s) 9, 49, 515, 1232, 1352, 1381, 1575, 1602
SspMI CTAG 1 cut(s) 741
SstI GAGCTC 1 cut(s) 826
StyD4I CCNGG 4 cut(s) 583, 715, 843, 944
TaiI ACGT 7 cut(s) 108, 297, 681, 1156, 1218, 1496, 1563
TaqI TCGA 5 cut(s) 162, 658, 1095, 1266, 1433
TaqII GACCGA 1 cut(s) 545
TasI AATT 8 cut(s) 9, 49, 515, 1232, 1352, 1381, 1575, 1602
TauI GCSGC 4 cut(s) 351, 372, 495, 723
TfiI GAWTC 1 cut(s) 1438
Tru1I TTAA 8 cut(s) 41, 48, 335, 770, 989, 996, 1343, 1599
Tru9I TTAA 8 cut(s) 41, 48, 335, 770, 989, 996, 1343, 1599
TscAI CASTG 5 cut(s) 364, 923, 988, 1392, 1398
TseFI GTSAC 5 cut(s) 956, 1086, 1154, 1393, 1507
TseI GCWGC 6 cut(s) 74, 130, 463, 763, 1016, 1209
Tsp45I GTSAC 5 cut(s) 956, 1086, 1154, 1393, 1507
TspDTI ATGAA 7 cut(s) 17, 528, 1394, 1416, 1451, 1512, 1556
TspGWI ACGGA 3 cut(s) 342, 917, 1316
TspRI CASTG 5 cut(s) 364, 923, 988, 1392, 1398
Tth111I GACNNNGTC 1 cut(s) 532
VpaK11BI GGWCC 1 cut(s) 904
XapI RAATTY 4 cut(s) 515, 1381, 1575, 1602
XceI RCATGY 2 cut(s) 130, 885
XcmI CCANNNNNNNNNTGG 1 cut(s) 77
XmiI GTMKAC 2 cut(s) 536, 549
XspI CTAG 1 cut(s) 741
ZraI GACGTC 1 cut(s) 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.