RchiOBHm_Chr6g0263281

Galactose oxidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000556
Physical Location & Seq
Forward (+)
18072902 .. 18074545
1644 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23612

Sequence Viewer

Length: 1644 bp
ATGAAGAAGTGCCCAACTCTACCCCATCTCATTGTTTCCTTCCTCTTGATATCCACTTTTCTCTTCTCCCTGACCCACGCCGCCGGCGGCAAATGGGAGCTGCTTCTGAAAAGCGTCGGCATTTCCGCCATGCACATGCAGCTCCTTCACAACGACCGCGTCATCATGTTCGACCGCACCGACTTTGGAAAATCCAACCTCTCCCTTCCCAACGGCGTCTGCCGCAACAATCCCAACGACAAGGCGCTTAAAGTCGACTGCACGGCTCACTCGGCCGAGTACGACGTGGCGTCTAACAATATCCGTCCCCTGTTCGTGTACTCGGACACGTGGTGCTCCTCCGGATCAGTAAACTCCAAAGGACGTCTGGTCCAGACGGGAGGTTTCAACGACGGAGATAGAAGGGTTAGGGTTTTTGATCCGTGTCCTACTTGTGACTGGAAAGAGATCGAGTTCGGGTTAGTCAACCGGAGATGGTACGCCAGCAATCATATTCTGCCAGATGGACGGCAGATAATCATCGGCGGAACGCAGCAGTTCAACTACGAGTTTTACCCCAAAAGTGAGGGCTCAATGAACGCTCTCAGTTTGCCTTTTCTTGCTGAGACAAGTGATGGCAAAGCCGTAGACAACAATCTCTACCCCTTTGTTTTTCTCCACGTTGACGGCAATCTTTTCATATTCGCCAACAACAGAGCTATATTGTTCGATTATGTTGCCGCTAAAATCGTGATGACGTACCCAACAATACCCGGTGGAGACCCGAGGTCGTATCCGAGCACCGGTTCAGCGGTGCTGTTACCTCTCAAGAGTTCAAAAGGTCAGGCTGTGGCAGCTGAGGTTTTAGTCTGCGGTGGAGCTCCCAAAGGCTCTTATTTTAATGCCCAAAGGGGAGCTTTCGTGGAAGCATTGAAGACATGCGCTCGGATCAAAATAACCGACCCGAACCCGCAGTGGCTTGTGGAAGACATGCCTCTAGCTAGAGTCATGGGTGACATGACGTTACTTCCCAACGGTGACGTTTTAATTATCAACGGTGCCAGACTAGGTGCCGCGGGGTTGGAGATGGGGCGGAATCCGGTACTCAACCCGGTTGTTTACAAGCCAGATAATGCGGTCGGGTCACGGTTCGAGCAACAAAACCCTAGTACCATACCACGTATGTACCACTCTACTGCAGTACTGCTACGTGATGGAAGGGTACTCGTTGGAGGTAGTAACCCTCATTATCGTTACGAGTTCTCAAACGTGCTTTTCCCAACTGAACTTGCCTTAGAAGCATTCTCTCCTAATTACTTGGACTCGCAATTCGCAAGTATACGCCCGACCATCTTATCACCTCGGTCACAAGTTGAGATTGGTTATGGAAAGAAGCTAGCCATTCGATTTTCGATAACGGGGAAAATAGCACTAGACTCGGTGTCCGTTACGATGGTGTTACCTTCATTTACTACCCATTCGTTCTCGATGAACCATAGGCTAGTAGTTCTTGCTTCCGAGAAGGTTAACGCAGTGGGGAACTTGAAGTTTCGAGTTCAGGTTACGACGCCGGCTTCCGGTAATCTTGCTCCATCCGGATATTATCTTGTATATGTGGTTCATCAGCAGATTCCAAGTGCGGGCATTTGGGTCAAAATTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

547

Amino Acids

60.11

Weight (kDa)

9.08

Isoelectric Point (pI)

31.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 44 - 432 5.5e-184 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 441 - 546 8.6e-26 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000556)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19900 AT1G75620
fragaria_vesca FvH4_2g08320 FvH4_2g08340 FvH4_2g39130 FvH4_2g39150
malus_domestica MD08G1016600.v1.1 MD08G1016900.v1.1 MD08G1017000.v1.1 MD08G1082100.v1.1 MD13G1087700.v1.1 MD14G1007900.v1.1 MD15G1015700.v1.1 MD15G1015800.v1.1 MD15G1015900.v1.1 MD15G1016000.v1.1 MD15G1068600.v1.1 MD15G1068700.v1.1
prunus_persica Prupe.1G369700_v2.0.a1 Prupe.1G369800_v2.0.a1
pyrus_communis pycom08g01440 pycom08g01450 pycom08g01480 pycom15g01350
rosa_chinensis RchiOBHm_Chr4g0408881 RchiOBHm_Chr6g0263281 RchiOBHm_Chr6g0263301 RchiOBHm_Chr6g0263331 RchiOBHm_Chr6g0302251 RchiOBHm_Chr6g0302271 RchiOBHm_Chr6g0302321 RchiOBHm_Chr6g0302331
rosa_laevigata RLG00000008616 RLG00000011177 RLG00000011178 RLG00000011182 RLG00000014357 RLG00000014362 RLG00000014363 RLG00000014365 RLG00000018749
rosa_multiflora Rmu_co8182314.1_g000001 Rmu_co8224130.1_g000001 Rmu_co8328361.1_g000001 Rmu_co8367879.1_g000001 Rmu_sc0000310.1_g000016 Rmu_sc0000310.1_g000033 Rmu_sc0001855.1_g000020 Rmu_sc0002778.1_g000005 Rmu_sc0003089.1_g000001 Rmu_sc0003089.1_g000012 Rmu_sc0003089.1_g000021 Rmu_sc0003633.1_g000013 Rmu_sc0003633.1_g000022
rosa_roxburghii Rroxscaffold_176G00431040 Rroxscaffold_5G00353250 Rroxscaffold_7G00165850 Rroxscaffold_7G00165920 Rroxscaffold_7G00165930 Rroxscaffold_7G00204510 Rroxscaffold_7G00204560
rosa_rugosa Rorug02G0245300 Rorug04G0088500 Rorug06G0004200 Rorug06G0004300 Rorug06G0313500 Rorug06G0313600 Rorug06G0313700
rosa_samantha Rh4CG160500 Rh6AG123400 Rh6AG123700 Rh6AG124000 Rh6AG426200 Rh6AG426400 Rh6AG426600 Rh7CG259000
rosa_wichuraiana Rw4G012520 Rw6G010610 Rw6G010620 Rw6G010640 Rw6G010780 Rw6G036900 Rw6G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 367
AccB1I GGYRCC 2 cut(s) 1037, 1049
AccI GTMKAC 3 cut(s) 255, 627, 1318
AccII CGCG 2 cut(s) 159, 1055
AccIII TCCGGA 2 cut(s) 341, 1574
AclWI GGATC 3 cut(s) 352, 413, 935
AcoI YGGCCR 1 cut(s) 273
AcsI RAATTY 1 cut(s) 1635
AcvI CACGTG 1 cut(s) 330
AcyI GRCGYC 4 cut(s) 216, 290, 364, 1547
AdeI CACNNNGTG 1 cut(s) 333
AfaI GTAC 9 cut(s) 281, 320, 479, 740, 1083, 1150, 1166, 1182, 1203
AfiI CCNNNNNNNGG 3 cut(s) 782, 1556, 1619
AflIII ACRYGT 1 cut(s) 327
AgeI ACCGGT 1 cut(s) 782
AgsI TTSAA 5 cut(s) 388, 541, 816, 913, 1525
AhdI GACNNNNNGTC 4 cut(s) 289, 368, 766, 1420
AjiI CACGTC 1 cut(s) 286
AluBI AGCT 8 cut(s) 100, 142, 698, 836, 860, 896, 980, 1375
AluI AGCT 8 cut(s) 100, 142, 698, 836, 860, 896, 980, 1375
Alw21I GWGCWC 3 cut(s) 338, 782, 862
Alw26I GTCTC 2 cut(s) 599, 753
AlwI GGATC 3 cut(s) 352, 413, 935
Ama87I CYCGRG 1 cut(s) 763
Aor13HI TCCGGA 2 cut(s) 341, 1574
AoxI GGCC 1 cut(s) 273
ApeKI GCWGC 4 cut(s) 100, 139, 532, 833
ApoI RAATTY 1 cut(s) 1635
ArsI GACNNNNNNTTYG 2 cut(s) 1292, 1324
AsiGI ACCGGT 1 cut(s) 782
AspLEI GCGC 2 cut(s) 247, 923
AspS9I GGNCC 1 cut(s) 370
AsuC2I CCSGG 2 cut(s) 753, 1091
AsuHPI GGTGA 3 cut(s) 1004, 1028, 1329
AsuNHI GCTAGC 1 cut(s) 1375
AvaI CYCGRG 1 cut(s) 763
AvaII GGWCC 1 cut(s) 370
BaeGI GKGCMC 1 cut(s) 14
BaeI ACNNNNGTAYC 4 cut(s) 1132, 1148, 1165, 1181
BanI GGYRCC 2 cut(s) 1037, 1049
BanII GRGCYC 2 cut(s) 572, 862
BbrPI CACGTG 1 cut(s) 330
BbsI GAAGAC 2 cut(s) 920, 972
Bbv12I GWGCWC 3 cut(s) 338, 782, 862
BbvCI CCTCAGC 1 cut(s) 837
BbvI GCAGC 4 cut(s) 87, 151, 544, 845
BccI CCATC 9 cut(s) 33, 468, 497, 608, 1060, 1187, 1337, 1426, 1579
BceAI ACGGC 5 cut(s) 229, 279, 524, 608, 682
BcgI CGANNNNNNTGC 4 cut(s) 698, 732, 1398, 1432
BciVI GTATCC 1 cut(s) 783
BcnI CCSGG 2 cut(s) 753, 1091
BcoDI GTCTC 2 cut(s) 599, 753
BfaI CTAG 7 cut(s) 977, 981, 1046, 1146, 1376, 1412, 1481
BfmI CTRYAG 1 cut(s) 1176
BfoI RGCGCY 1 cut(s) 248
BfuI GTATCC 1 cut(s) 783
BisI GCNGC 9 cut(s) 81, 88, 101, 140, 223, 533, 720, 834, 1053
BlsI GCNGC 9 cut(s) 82, 89, 102, 141, 224, 534, 721, 835, 1054
BmcAI AGTACT 1 cut(s) 1182
Bme1390I CCNGG 2 cut(s) 753, 1091
Bme18I GGWCC 1 cut(s) 370
BmeRI GACNNNNNGTC 4 cut(s) 289, 368, 766, 1420
BmeT110I CYCGRG 1 cut(s) 763
BmgBI CACGTC 1 cut(s) 286
BmgT120I GGNCC 1 cut(s) 370
BmiI GGNNCC 2 cut(s) 1039, 1051
BmrFI CCNGG 2 cut(s) 753, 1091
BmtI GCTAGC 1 cut(s) 1379
BpiI GAAGAC 2 cut(s) 920, 972
Bpu10I CCTNAGC 1 cut(s) 837
BpuEI CTTGAG 1 cut(s) 791
BpuMI CCSGG 2 cut(s) 753, 1091
BsaAI YACGTR 3 cut(s) 330, 1160, 1190
BsaBI GATNNNNATC 1 cut(s) 518
BsaHI GRCGYC 4 cut(s) 216, 290, 364, 1547
BsaI GGTCTC 1 cut(s) 753
BsaJI CCNNGG 3 cut(s) 764, 1053, 1340
BsaWI WCCGGW 6 cut(s) 341, 468, 782, 1078, 1556, 1574
BsaXI ACNNNNNCTCC 2 cut(s) 885, 915
Bsc4I CCNNNNNNNGG 3 cut(s) 782, 1556, 1619
Bse118I RCCGGY 3 cut(s) 83, 782, 1549
Bse1I ACTGG 1 cut(s) 443
Bse8I GATNNNNATC 1 cut(s) 518
BseAI TCCGGA 2 cut(s) 341, 1574
BseDI CCNNGG 3 cut(s) 764, 1053, 1340
BseGI GGATG 1 cut(s) 1571
BseJI GATNNNNATC 1 cut(s) 518
BseLI CCNNNNNNNGG 3 cut(s) 782, 1556, 1619
BseMII CTCAG 3 cut(s) 594, 598, 828
BseNI ACTGG 1 cut(s) 443
BseRI GAGGAG 1 cut(s) 328
BseSI GKGCMC 1 cut(s) 14
BseX3I CGGCCG 1 cut(s) 273
BseXI GCAGC 4 cut(s) 87, 151, 544, 845
BsgI GTGCAG 1 cut(s) 244
Bsh1236I CGCG 2 cut(s) 159, 1055
Bsh1285I CGRYCG 4 cut(s) 157, 175, 276, 1119
BshFI GGCC 1 cut(s) 275
BshNI GGYRCC 2 cut(s) 1037, 1049
BshTI ACCGGT 1 cut(s) 782
BsiEI CGRYCG 4 cut(s) 157, 175, 276, 1119
BsiHKAI GWGCWC 3 cut(s) 338, 782, 862
BsiHKCI CYCGRG 1 cut(s) 763
BslFI GGGAC 1 cut(s) 291
BslI CCNNNNNNNGG 3 cut(s) 782, 1556, 1619
BsmAI GTCTC 2 cut(s) 599, 753
BsmFI GGGAC 1 cut(s) 291
BsmI GAATGC 1 cut(s) 1280
BsnI GGCC 1 cut(s) 275
Bso31I GGTCTC 1 cut(s) 753
BsoBI CYCGRG 1 cut(s) 763
Bsp1286I GDGCHC 5 cut(s) 14, 338, 572, 782, 862
Bsp13I TCCGGA 2 cut(s) 341, 1574
Bsp143I GATC 4 cut(s) 344, 418, 447, 927
BspANI GGCC 1 cut(s) 275
BspCNI CTCAG 3 cut(s) 595, 597, 829
BspEI TCCGGA 2 cut(s) 341, 1574
BspFNI CGCG 2 cut(s) 159, 1055
BspLI GGNNCC 2 cut(s) 1039, 1051
BspMAI CTGCAG 1 cut(s) 1180
BspOI GCTAGC 1 cut(s) 1379
BspPI GGATC 3 cut(s) 352, 413, 935
BspT107I GGYRCC 2 cut(s) 1037, 1049
BspTNI GGTCTC 1 cut(s) 753
BsrFI RCCGGY 3 cut(s) 83, 782, 1549
BsrI ACTGG 1 cut(s) 443
BssAI RCCGGY 3 cut(s) 83, 782, 1549
BssECI CCNNGG 3 cut(s) 764, 1053, 1340
BssMI GATC 4 cut(s) 344, 418, 447, 927
BssNAI GTATAC 1 cut(s) 1319
BssNI GRCGYC 4 cut(s) 216, 290, 364, 1547
Bst1107I GTATAC 1 cut(s) 1319
Bst4CI ACNGT 3 cut(s) 1016, 1037, 1128
Bst6I CTCTTC 1 cut(s) 68
BstACI GRCGYC 4 cut(s) 216, 290, 364, 1547
BstBAI YACGTR 3 cut(s) 330, 1160, 1190
BstC8I GCNNGC 5 cut(s) 85, 484, 1377, 1551, 1621
BstDEI CTNAG 4 cut(s) 584, 603, 837, 1273
BstDSI CCRYGG 1 cut(s) 1053
BstF5I GGATG 1 cut(s) 1571
BstFNI CGCG 2 cut(s) 159, 1055
BstH2I RGCGCY 1 cut(s) 248
BstHHI GCGC 2 cut(s) 247, 923
BstKTI GATC 4 cut(s) 347, 421, 450, 930
BstMAI GTCTC 2 cut(s) 599, 753
BstMBI GATC 4 cut(s) 344, 418, 447, 927
BstMCI CGRYCG 4 cut(s) 157, 175, 276, 1119
BstMWI GCNNNNNNNGC 5 cut(s) 139, 222, 272, 833, 1277
BstNSI RCATGY 3 cut(s) 139, 921, 973
BstSCI CCNGG 2 cut(s) 751, 1089
BstSFI CTRYAG 1 cut(s) 1176
BstSLI GKGCMC 1 cut(s) 14
BstUI CGCG 2 cut(s) 159, 1055
BstV1I GCAGC 4 cut(s) 87, 151, 544, 845
BstV2I GAAGAC 2 cut(s) 920, 972
BstZ17I GTATAC 1 cut(s) 1319
BstZI CGGCCG 1 cut(s) 273
BsuI GTATCC 1 cut(s) 783
BsuRI GGCC 1 cut(s) 275
BtgI CCRYGG 1 cut(s) 1053
BtrI CACGTC 1 cut(s) 286
BtsCI GGATG 1 cut(s) 1571
BtsI GCAGTG 2 cut(s) 959, 1518
BtsIMutI CAGTG 2 cut(s) 959, 1518
Cac8I GCNNGC 5 cut(s) 85, 484, 1377, 1551, 1621
CfoI GCGC 2 cut(s) 247, 923
Cfr10I RCCGGY 3 cut(s) 83, 782, 1549
Cfr13I GGNCC 1 cut(s) 370
Cfr42I CCGCGG 1 cut(s) 1056
CseI GACGC 5 cut(s) 103, 148, 205, 279, 1555
Csp6I GTAC 9 cut(s) 280, 319, 478, 739, 1082, 1149, 1165, 1181, 1202
CspAI ACCGGT 1 cut(s) 782
CviAII CATG 7 cut(s) 130, 136, 166, 918, 970, 988, 997
CviQI GTAC 9 cut(s) 280, 319, 478, 739, 1082, 1149, 1165, 1181, 1202
DdeI CTNAG 4 cut(s) 584, 603, 837, 1273
DpnI GATC 4 cut(s) 346, 420, 449, 929
DpnII GATC 4 cut(s) 344, 418, 447, 927
DraIII CACNNNGTG 1 cut(s) 333
DriI GACNNNNNGTC 4 cut(s) 289, 368, 766, 1420
EaeI YGGCCR 1 cut(s) 273
EagI CGGCCG 1 cut(s) 273
Eam1104I CTCTTC 1 cut(s) 68
Eam1105I GACNNNNNGTC 4 cut(s) 289, 368, 766, 1420
EarI CTCTTC 1 cut(s) 68
EciI GGCGGA 3 cut(s) 115, 540, 1087
Ecl136II GAGCTC 1 cut(s) 860
EclXI CGGCCG 1 cut(s) 273
Eco24I GRGCYC 2 cut(s) 572, 862
Eco31I GGTCTC 1 cut(s) 753
Eco32I GATATC 1 cut(s) 51
Eco47I GGWCC 1 cut(s) 370
Eco52I CGGCCG 1 cut(s) 273
Eco53kI GAGCTC 1 cut(s) 860
Eco72I CACGTG 1 cut(s) 330
Eco88I CYCGRG 1 cut(s) 763
EcoICRI GAGCTC 1 cut(s) 860
EcoRV GATATC 1 cut(s) 51
EcoT38I GRGCYC 2 cut(s) 572, 862
FaeI CATG 7 cut(s) 133, 139, 169, 921, 973, 991, 1000
FalI AAGNNNNNCTT 2 cut(s) 880, 912
FaqI GGGAC 1 cut(s) 291
FatI CATG 7 cut(s) 129, 135, 165, 917, 969, 987, 996
FauI CCCGC 3 cut(s) 957, 1048, 1612
FblI GTMKAC 3 cut(s) 255, 627, 1318
Fnu4HI GCNGC 9 cut(s) 81, 88, 101, 140, 223, 533, 720, 834, 1053
FokI GGATG 1 cut(s) 1558
FriOI GRGCYC 2 cut(s) 572, 862
Fsp4HI GCNGC 9 cut(s) 81, 88, 101, 140, 223, 533, 720, 834, 1053
FspBI CTAG 7 cut(s) 977, 981, 1046, 1146, 1376, 1412, 1481
GlaI GCGC 2 cut(s) 246, 922
GluI GCNGC 9 cut(s) 81, 88, 101, 140, 223, 533, 720, 834, 1053
HaeII RGCGCY 1 cut(s) 248
HaeIII GGCC 1 cut(s) 275
HgaI GACGC 5 cut(s) 103, 148, 205, 279, 1555
HhaI GCGC 2 cut(s) 247, 923
Hin1I GRCGYC 4 cut(s) 216, 290, 364, 1547
Hin1II CATG 7 cut(s) 133, 139, 169, 921, 973, 991, 1000
Hin6I GCGC 2 cut(s) 245, 921
HinP1I GCGC 2 cut(s) 245, 921
HincII GTYRAC 4 cut(s) 256, 466, 664, 1507
HindII GTYRAC 4 cut(s) 256, 466, 664, 1507
HinfI GANTC 5 cut(s) 984, 1075, 1301, 1415, 1609
HpaI GTTAAC 1 cut(s) 1507
HphI GGTGA 3 cut(s) 1004, 1028, 1329
Hpy166II GTNNAC 9 cut(s) 256, 319, 352, 466, 628, 664, 1099, 1319, 1507
Hpy188I TCNGA 5 cut(s) 108, 325, 777, 927, 1498
Hpy188III TCNNGA 7 cut(s) 46, 342, 373, 730, 808, 1465, 1575
Hpy8I GTNNAC 9 cut(s) 256, 319, 352, 466, 628, 664, 1099, 1319, 1507
Hpy99I CGWCG 4 cut(s) 119, 287, 395, 1549
HpyAV CCTTC 7 cut(s) 49, 155, 215, 396, 1191, 1452, 1495
HpyCH4III ACNGT 3 cut(s) 1016, 1037, 1128
HpyCH4V TGCA 4 cut(s) 133, 139, 261, 1178
HpyF10VI GCNNNNNNNGC 5 cut(s) 139, 222, 272, 833, 1277
HpyF3I CTNAG 4 cut(s) 584, 603, 837, 1273
Hsp92I GRCGYC 4 cut(s) 216, 290, 364, 1547
Hsp92II CATG 7 cut(s) 133, 139, 169, 921, 973, 991, 1000
HspAI GCGC 2 cut(s) 245, 921
Kpn2I TCCGGA 2 cut(s) 341, 1574
KroI GCCGGC 2 cut(s) 83, 1549
KroNI GCCGGC 2 cut(s) 85, 1551
KspAI GTTAAC 1 cut(s) 1507
KspI CCGCGG 1 cut(s) 1056
Kzo9I GATC 4 cut(s) 344, 418, 447, 927
LmnI GCTCC 7 cut(s) 97, 147, 341, 857, 865, 893, 1573
Lsp1109I GCAGC 4 cut(s) 87, 151, 544, 845
MaeI CTAG 7 cut(s) 977, 981, 1046, 1146, 1376, 1412, 1481
MalI GATC 4 cut(s) 346, 420, 449, 929
MboI GATC 4 cut(s) 344, 418, 447, 927
MboII GAAGA 4 cut(s) 16, 55, 925, 977
MhlI GDGCHC 5 cut(s) 14, 338, 572, 782, 862
MluCI AATT 4 cut(s) 1026, 1291, 1307, 1635
MlyI GAGTC 3 cut(s) 993, 1295, 1409
MmeI TCCRAC 3 cut(s) 219, 1041, 1189
MreI CGCCGGCG 1 cut(s) 83
MroI TCCGGA 2 cut(s) 341, 1574
MroNI GCCGGC 2 cut(s) 83, 1549
MseI TTAA 4 cut(s) 249, 879, 1025, 1506
MslI CAYNNNNRTG 1 cut(s) 134
MspA1I CMGCKG 3 cut(s) 791, 836, 1055
MspR9I CCNGG 2 cut(s) 753, 1091
Mva1269I GAATGC 1 cut(s) 1280
MvnI CGCG 2 cut(s) 159, 1055
MwoI GCNNNNNNNGC 5 cut(s) 139, 222, 272, 833, 1277
NaeI GCCGGC 2 cut(s) 85, 1551
NciI CCSGG 2 cut(s) 753, 1091
NdeII GATC 4 cut(s) 344, 418, 447, 927
NgoMIV GCCGGC 2 cut(s) 83, 1549
NheI GCTAGC 1 cut(s) 1375
NlaIII CATG 7 cut(s) 133, 139, 169, 921, 973, 991, 1000
NlaIV GGNNCC 2 cut(s) 1039, 1051
NmeAIII GCCGAG 2 cut(s) 251, 301
NmuCI GTSAC 5 cut(s) 434, 992, 1016, 1122, 1344
NspI RCATGY 3 cut(s) 139, 921, 973
PcsI WCGNNNNNNNCGW 1 cut(s) 177
PctI GAATGC 1 cut(s) 1280
PdiI GCCGGC 2 cut(s) 85, 1551
PfeI GAWTC 2 cut(s) 1075, 1609
PflFI GACNNNGTC 1 cut(s) 158
PinAI ACCGGT 1 cut(s) 782
PkrI GCNGC 9 cut(s) 82, 89, 102, 141, 224, 534, 721, 835, 1054
PleI GAGTC 3 cut(s) 992, 1295, 1409
PmaCI CACGTG 1 cut(s) 330
PmlI CACGTG 1 cut(s) 330
PpsI GAGTC 3 cut(s) 992, 1295, 1409
Ppu21I YACGTR 3 cut(s) 330, 1160, 1190
Psp124BI GAGCTC 1 cut(s) 862
PspCI CACGTG 1 cut(s) 330
PspN4I GGNNCC 2 cut(s) 1039, 1051
PspPI GGNCC 1 cut(s) 370
PsrI GAACNNNNNNTAC 2 cut(s) 1581, 1613
PstI CTGCAG 1 cut(s) 1180
PsyI GACNNNGTC 1 cut(s) 158
PvuII CAGCTG 1 cut(s) 836
RsaI GTAC 9 cut(s) 281, 320, 479, 740, 1083, 1150, 1166, 1182, 1203
RsaNI GTAC 9 cut(s) 280, 319, 478, 739, 1082, 1149, 1165, 1181, 1202
RseI CAYNNNNRTG 1 cut(s) 134
SacI GAGCTC 1 cut(s) 862
SacII CCGCGG 1 cut(s) 1056
SalI GTCGAC 1 cut(s) 254
SaqAI TTAA 4 cut(s) 249, 879, 1025, 1506
SatI GCNGC 9 cut(s) 81, 88, 101, 140, 223, 533, 720, 834, 1053
Sau3AI GATC 4 cut(s) 344, 418, 447, 927
Sau96I GGNCC 1 cut(s) 370
ScaI AGTACT 1 cut(s) 1182
SchI GAGTC 3 cut(s) 993, 1295, 1409
ScrFI CCNGG 2 cut(s) 753, 1091
SduI GDGCHC 5 cut(s) 14, 338, 572, 782, 862
SfcI CTRYAG 1 cut(s) 1176
Sfr303I CCGCGG 1 cut(s) 1056
SgrAI CRCCGGYG 1 cut(s) 83
SgrBI CCGCGG 1 cut(s) 1056
SinI GGWCC 1 cut(s) 370
SmiMI CAYNNNNRTG 1 cut(s) 134
SmlI CTYRAG 1 cut(s) 806
SmoI CTYRAG 1 cut(s) 806
Sse9I AATT 4 cut(s) 1026, 1291, 1307, 1635
SspMI CTAG 7 cut(s) 977, 981, 1046, 1146, 1376, 1412, 1481
SstI GAGCTC 1 cut(s) 862
StyD4I CCNGG 2 cut(s) 751, 1089
TaaI ACNGT 3 cut(s) 1016, 1037, 1128
TaqI TCGA 9 cut(s) 171, 255, 450, 708, 1131, 1384, 1391, 1466, 1531
TaqII GACCGA 1 cut(s) 1332
TasI AATT 4 cut(s) 1026, 1291, 1307, 1635
TatI WGTACW 2 cut(s) 318, 1180
TauI GCSGC 5 cut(s) 83, 90, 225, 722, 1055
TfiI GAWTC 2 cut(s) 1075, 1609
Tru1I TTAA 4 cut(s) 249, 879, 1025, 1506
Tru9I TTAA 4 cut(s) 249, 879, 1025, 1506
TscAI CASTG 2 cut(s) 959, 1518
TseFI GTSAC 5 cut(s) 434, 992, 1016, 1122, 1344
TseI GCWGC 4 cut(s) 100, 139, 532, 833
Tsp45I GTSAC 5 cut(s) 434, 992, 1016, 1122, 1344
TspDTI ATGAA 6 cut(s) 17, 590, 667, 1434, 1484, 1589
TspGWI ACGGA 4 cut(s) 293, 408, 411, 1414
TspRI CASTG 2 cut(s) 959, 1518
Tth111I GACNNNGTC 1 cut(s) 158
VpaK11BI GGWCC 1 cut(s) 370
XapI RAATTY 1 cut(s) 1635
XceI RCATGY 3 cut(s) 139, 921, 973
XcmI CCANNNNNNNNNTGG 1 cut(s) 364
XmiI GTMKAC 3 cut(s) 255, 627, 1318
XspI CTAG 7 cut(s) 977, 981, 1046, 1146, 1376, 1412, 1481
ZraI GACGTC 1 cut(s) 365
ZrmI AGTACT 1 cut(s) 1182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.