MD10G1111000.v1.1

UDP-glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000284
Physical Location & Seq
Forward (+)
18230227 .. 18231864
1638 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1111000.v1.1.491

Sequence Viewer

Length: 1383 bp
ATGGAGAAAGGACAGCTGAAAGCCTACAAAGCTCACTGCTTGATCTTACCCTATCCGAGCCAAGGCCACATGAATCCGATGCTCCAATTTGCCAAGCTTCTAGATCACAAAGGAGTGAGAGCCACTCTCGTGACGACTCGCTTTCTCTACAAGACAATGCACAGCTCAGGATCGAGCAGCGCAGCTTGGGAGACCATCTCCGATGGCTTCGATGATGCTGGGAGAGGGGACACAAACACAGACATATATTTGGGAAGGTTCTGGCAAGTGGGGTCAAAAACTTTGGCCGAGCTTCTTGAGAAGCTTTCGAACTCAGGGTCCCCCGTGGATTGTGTTGTCTATGATGCATTCATGCCTTGGCCTTTGGATGTCGCCAGGAAGCTTGGAATAGCGGGGGCAGTTTACTTCACTCAGTCTTGTGCTGTTGACAATGTCTACTACCATGTCCACAGAGGGCTGTTGAAGCTTCCTCTTGCTGATGGTCATTCTCAAATTTCACTTCCCGGGTTGCCAGCGCTGGATCCTTTGGACTTGCCATCGTTTGTTTACGATTGTAGATCTTACCCGGCTTTCTACAGCATGCTTGTGGGTCAGTTCTCGAATGTCGACAAAGCTGATTGGGTCCTGTGCAACACCTTTTATGAGTTGGAAGAACAAGTGGTGGATTGGATGGCAAAGCTTTGGCGATTGAGGACCGTTGGACCAACTATACCGTCCAACTACTTGAATAAGAGACTCAAAGATGACAAAGAATACAATGTCAACTTCTTCAAATCAGACAATGATGCCTGCATAAAATGGCTAAACGAGAGGCCAAAAGGTTCCATTGCTTATGTATCATTTGGCAGCATAGCGAAACTCGAAGATGAACAAATGGAGGAGCTGGCTTGGGGCTTGAGGAGGAGCAAAAGTAGTTTCTTGTGGGTGGTTAGAGAATCAGAAGCGGCCAAGGTCCCTAAAGGGTTTATCGAGGAGACATCCGAGAAGGGTTTAGTGGTTTCGTGGTGCCCCCAAATGGAGGTTTTGGCTCACAAGGCGGTTGGATGCTTCGTCACACATTGCGGTTGGAACTCAACTTTGGAGGCATTGAGTTTGGGGGTTCCGATGGTGGCATTGCCACAGTGGAGTGACCAGCGTACAAATGCCAAATACATTATGGATGTGTGGAAAGTAGGGGTTAGAGCTCCAACTGATGAGAAAGGGGTTGTGAGACAAGACGTATTAGAACAATGTATAAGTGAAGTAATGGAGGGGGAGATAGGGGAAGAAATACAGAAGAACGCCGTGAAATGGAAAGAATTGGCCCGAAAAGCAGTGGATGAGGGCGGAAGCTCTGATAAAAACATTGACGAGTTCATTGCAAAACTGCAGAATCAAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

461

Amino Acids

51.7

Weight (kDa)

5.71

Isoelectric Point (pI)

38.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 273 - 419 5e-26 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1005
AccI GTMKAC 2 cut(s) 435, 606
AciI CCGC 5 cut(s) 392, 944, 1037, 1062, 1326
AclWI GGATC 3 cut(s) 178, 515, 528
AcoI YGGCCR 2 cut(s) 285, 945
AcsI RAATTY 1 cut(s) 492
AfaI GTAC 1 cut(s) 1138
AfeI AGCGCT 1 cut(s) 516
AfiI CCNNNNNNNGG 4 cut(s) 62, 1015, 1018, 1290
AgsI TTSAA 3 cut(s) 463, 727, 772
AjnI CCWGG 1 cut(s) 374
AjuI GAANNNNNNNTTGG 2 cut(s) 1061, 1093
AleI CACNNNNGTG 1 cut(s) 128
AloI GAACNNNNNNTCC 2 cut(s) 302, 334
Alw21I GWGCWC 1 cut(s) 1186
Alw26I GTCTC 4 cut(s) 185, 727, 968, 1204
AlwI GGATC 3 cut(s) 178, 515, 528
Ama87I CYCGRG 1 cut(s) 503
Aor51HI AGCGCT 1 cut(s) 516
AoxI GGCC 6 cut(s) 64, 285, 359, 812, 945, 1302
ApeKI GCWGC 3 cut(s) 177, 182, 846
ApoI RAATTY 1 cut(s) 492
ArsI GACNNNNNNTTYG 2 cut(s) 302, 334
AspLEI GCGC 2 cut(s) 182, 517
AspS9I GGNCC 6 cut(s) 318, 622, 693, 701, 952, 1303
AsuC2I CCSGG 3 cut(s) 504, 505, 566
AsuII TTCGAA 1 cut(s) 308
AvaI CYCGRG 1 cut(s) 503
AvaII GGWCC 5 cut(s) 318, 622, 693, 701, 952
BaeGI GKGCMC 1 cut(s) 1010
BamHI GGATCC 1 cut(s) 520
BanI GGYRCC 1 cut(s) 1005
BanII GRGCYC 1 cut(s) 1186
BauI CACGAG 1 cut(s) 128
Bbv12I GWGCWC 1 cut(s) 1186
BbvI GCAGC 3 cut(s) 189, 194, 858
BccI CCATC 6 cut(s) 197, 203, 473, 544, 664, 1099
BceAI ACGGC 1 cut(s) 1268
BcgI CGANNNNNNTGC 2 cut(s) 1340, 1374
BciT130I CCWGG 1 cut(s) 376
BcnI CCSGG 3 cut(s) 504, 505, 566
BcoDI GTCTC 4 cut(s) 185, 727, 968, 1204
BfaI CTAG 2 cut(s) 101, 1381
BfmI CTRYAG 2 cut(s) 574, 1367
BfoI RGCGCY 1 cut(s) 518
BglII AGATCT 1 cut(s) 557
BisI GCNGC 4 cut(s) 178, 183, 847, 945
BlsI GCNGC 4 cut(s) 179, 184, 848, 946
Bme1390I CCNGG 4 cut(s) 376, 504, 505, 566
Bme18I GGWCC 5 cut(s) 318, 622, 693, 701, 952
BmeT110I CYCGRG 1 cut(s) 503
BmgT120I GGNCC 6 cut(s) 318, 622, 693, 701, 952, 1303
BmiI GGNNCC 8 cut(s) 319, 320, 522, 623, 823, 954, 1007, 1101
BmrFI CCNGG 4 cut(s) 376, 504, 505, 566
BmsI GCATC 5 cut(s) 69, 205, 334, 775, 1034
BplI GAGNNNNNCTC 6 cut(s) 109, 141, 111, 143, 182, 214
Bpu10I CCTNAGC 1 cut(s) 166
Bpu14I TTCGAA 1 cut(s) 308
BpuEI CTTGAG 2 cut(s) 317, 916
BpuMI CCSGG 3 cut(s) 504, 505, 566
BsaI GGTCTC 1 cut(s) 185
BsaJI CCNNGG 5 cut(s) 61, 324, 356, 503, 948
BsaXI ACNNNNNCTCC 2 cut(s) 895, 925
Bsc4I CCNNNNNNNGG 4 cut(s) 62, 1015, 1018, 1290
Bse3DI GCAATG 4 cut(s) 825, 1057, 1112, 1356
BseBI CCWGG 1 cut(s) 376
BseDI CCNNGG 5 cut(s) 61, 324, 356, 503, 948
BseGI GGATG 6 cut(s) 373, 675, 977, 1049, 1165, 1324
BseLI CCNNNNNNNGG 4 cut(s) 62, 1015, 1018, 1290
BseMI GCAATG 4 cut(s) 825, 1057, 1112, 1356
BseMII CTCAG 3 cut(s) 180, 327, 425
BseRI GAGGAG 4 cut(s) 893, 913, 916, 986
BseSI GKGCMC 1 cut(s) 1010
BseXI GCAGC 3 cut(s) 189, 194, 858
BseYI CCCAGC 1 cut(s) 218
BshFI GGCC 6 cut(s) 66, 287, 361, 814, 947, 1304
BshNI GGYRCC 1 cut(s) 1005
BsiHKAI GWGCWC 1 cut(s) 1186
BsiHKCI CYCGRG 1 cut(s) 503
BsiSI CCGG 2 cut(s) 504, 566
BslFI GGGAC 3 cut(s) 242, 304, 938
BslI CCNNNNNNNGG 4 cut(s) 62, 1015, 1018, 1290
BsmAI GTCTC 4 cut(s) 185, 727, 968, 1204
BsmFI GGGAC 3 cut(s) 242, 304, 938
BsmI GAATGC 1 cut(s) 347
BsnI GGCC 6 cut(s) 66, 287, 361, 814, 947, 1304
Bso31I GGTCTC 1 cut(s) 185
BsoBI CYCGRG 1 cut(s) 503
Bsp119I TTCGAA 1 cut(s) 308
Bsp1286I GDGCHC 2 cut(s) 1010, 1186
Bsp143I GATC 5 cut(s) 42, 103, 170, 520, 557
BspACI CCGC 5 cut(s) 392, 944, 1037, 1062, 1326
BspANI GGCC 6 cut(s) 66, 287, 361, 814, 947, 1304
BspCNI CTCAG 3 cut(s) 179, 326, 424
BspLI GGNNCC 8 cut(s) 319, 320, 522, 623, 823, 954, 1007, 1101
BspMAI CTGCAG 1 cut(s) 1371
BspPI GGATC 3 cut(s) 178, 515, 528
BspT104I TTCGAA 1 cut(s) 308
BspT107I GGYRCC 1 cut(s) 1005
BspTNI GGTCTC 1 cut(s) 185
BsrDI GCAATG 4 cut(s) 825, 1057, 1112, 1356
BssECI CCNNGG 5 cut(s) 61, 324, 356, 503, 948
BssMI GATC 5 cut(s) 42, 103, 170, 520, 557
BssSI CACGAG 1 cut(s) 128
BssT1I CCWWGG 3 cut(s) 61, 356, 948
Bst2BI CACGAG 1 cut(s) 128
Bst2UI CCWGG 1 cut(s) 376
Bst4CI ACNGT 3 cut(s) 697, 714, 1122
BstBI TTCGAA 1 cut(s) 308
BstC8I GCNNGC 4 cut(s) 513, 581, 790, 885
BstDEI CTNAG 3 cut(s) 166, 313, 411
BstDSI CCRYGG 1 cut(s) 324
BstF5I GGATG 6 cut(s) 373, 675, 977, 1049, 1165, 1324
BstH2I RGCGCY 1 cut(s) 518
BstHHI GCGC 2 cut(s) 182, 517
BstKTI GATC 5 cut(s) 45, 106, 173, 523, 560
BstMAI GTCTC 4 cut(s) 185, 727, 968, 1204
BstMBI GATC 5 cut(s) 42, 103, 170, 520, 557
BstMWI GCNNNNNNNGC 4 cut(s) 29, 463, 1034, 1310
BstNI CCWGG 1 cut(s) 376
BstNSI RCATGY 1 cut(s) 583
BstSCI CCNGG 4 cut(s) 374, 502, 503, 564
BstSFI CTRYAG 2 cut(s) 574, 1367
BstSLI GKGCMC 1 cut(s) 1010
BstV1I GCAGC 3 cut(s) 189, 194, 858
BstX2I RGATCY 2 cut(s) 520, 557
BstYI RGATCY 2 cut(s) 520, 557
BsuRI GGCC 6 cut(s) 66, 287, 361, 814, 947, 1304
BtgI CCRYGG 1 cut(s) 324
BtsCI GGATG 6 cut(s) 373, 675, 977, 1049, 1165, 1324
BtsI GCAGTG 2 cut(s) 34, 1320
BtsIMutI CAGTG 3 cut(s) 34, 1127, 1320
Cac8I GCNNGC 4 cut(s) 513, 581, 790, 885
CfoI GCGC 2 cut(s) 182, 517
Cfr13I GGNCC 6 cut(s) 318, 622, 693, 701, 952, 1303
Cfr9I CCCGGG 1 cut(s) 503
Csp6I GTAC 1 cut(s) 1137
CviAII CATG 4 cut(s) 70, 352, 443, 580
CviQI GTAC 1 cut(s) 1137
DdeI CTNAG 3 cut(s) 166, 313, 411
DpnI GATC 5 cut(s) 44, 105, 172, 522, 559
DpnII GATC 5 cut(s) 42, 103, 170, 520, 557
EaeI YGGCCR 2 cut(s) 285, 945
EciI GGCGGA 1 cut(s) 1341
Ecl136II GAGCTC 1 cut(s) 1184
Eco130I CCWWGG 3 cut(s) 61, 356, 948
Eco24I GRGCYC 1 cut(s) 1186
Eco31I GGTCTC 1 cut(s) 185
Eco47I GGWCC 5 cut(s) 318, 622, 693, 701, 952
Eco47III AGCGCT 1 cut(s) 516
Eco53kI GAGCTC 1 cut(s) 1184
Eco88I CYCGRG 1 cut(s) 503
EcoICRI GAGCTC 1 cut(s) 1184
EcoO109I RGGNCCY 3 cut(s) 318, 622, 952
EcoRII CCWGG 1 cut(s) 374
EcoT14I CCWWGG 3 cut(s) 61, 356, 948
EcoT22I ATGCAT 1 cut(s) 349
EcoT38I GRGCYC 1 cut(s) 1186
ErhI CCWWGG 3 cut(s) 61, 356, 948
FaeI CATG 4 cut(s) 73, 355, 446, 583
FaqI GGGAC 3 cut(s) 242, 304, 938
FatI CATG 4 cut(s) 69, 351, 442, 579
FauI CCCGC 1 cut(s) 385
FblI GTMKAC 2 cut(s) 435, 606
Fnu4HI GCNGC 4 cut(s) 178, 183, 847, 945
FokI GGATG 6 cut(s) 380, 682, 964, 1056, 1172, 1331
FriOI GRGCYC 1 cut(s) 1186
Fsp4HI GCNGC 4 cut(s) 178, 183, 847, 945
FspBI CTAG 2 cut(s) 101, 1381
GlaI GCGC 2 cut(s) 181, 516
GluI GCNGC 4 cut(s) 178, 183, 847, 945
GsaI CCCAGC 1 cut(s) 222
HaeII RGCGCY 1 cut(s) 518
HaeIII GGCC 6 cut(s) 66, 287, 361, 814, 947, 1304
HapII CCGG 2 cut(s) 504, 566
HhaI GCGC 2 cut(s) 182, 517
Hin1II CATG 4 cut(s) 73, 355, 446, 583
Hin6I GCGC 2 cut(s) 180, 515
HinP1I GCGC 2 cut(s) 180, 515
HincII GTYRAC 3 cut(s) 427, 607, 763
HindII GTYRAC 3 cut(s) 427, 607, 763
HindIII AAGCTT 5 cut(s) 95, 302, 380, 464, 677
HinfI GANTC 5 cut(s) 73, 136, 735, 935, 1372
HpaII CCGG 2 cut(s) 504, 566
Hpy166II GTNNAC 7 cut(s) 403, 427, 436, 448, 547, 607, 763
Hpy188I TCNGA 8 cut(s) 57, 78, 202, 778, 940, 982, 1104, 1336
Hpy188III TCNNGA 5 cut(s) 101, 130, 168, 296, 598
Hpy8I GTNNAC 7 cut(s) 403, 427, 436, 448, 547, 607, 763
HpyAV CCTTC 2 cut(s) 249, 979
HpyCH4III ACNGT 3 cut(s) 697, 714, 1122
HpyCH4IV ACGT 1 cut(s) 1218
HpyCH4V TGCA 6 cut(s) 160, 347, 630, 792, 1361, 1369
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 463, 1034, 1310
HpyF3I CTNAG 3 cut(s) 166, 313, 411
HpySE526I ACGT 1 cut(s) 1218
Hsp92II CATG 4 cut(s) 73, 355, 446, 583
HspAI GCGC 2 cut(s) 180, 515
KflI GGGWCCC 1 cut(s) 318
Kzo9I GATC 5 cut(s) 42, 103, 170, 520, 557
LmnI GCTCC 4 cut(s) 87, 880, 903, 1189
Lsp1109I GCAGC 3 cut(s) 189, 194, 858
LweI GCATC 5 cut(s) 69, 205, 334, 775, 1034
MaeI CTAG 2 cut(s) 101, 1381
MaeII ACGT 1 cut(s) 1218
MaeIII GTNAC 3 cut(s) 130, 1051, 1127
MalI GATC 5 cut(s) 44, 105, 172, 522, 559
MboI GATC 5 cut(s) 42, 103, 170, 520, 557
MboII GAAGA 5 cut(s) 662, 760, 875, 1277, 1288
MflI RGATCY 2 cut(s) 520, 557
MhlI GDGCHC 2 cut(s) 1010, 1186
MluCI AATT 3 cut(s) 86, 492, 1298
MlyI GAGTC 2 cut(s) 130, 729
MmeI TCCRAC 6 cut(s) 627, 679, 741, 1021, 1046, 1211
Mph1103I ATGCAT 1 cut(s) 349
MslI CAYNNNNRTG 2 cut(s) 128, 584
MspA1I CMGCKG 1 cut(s) 16
MspI CCGG 2 cut(s) 504, 566
MspR9I CCNGG 4 cut(s) 376, 504, 505, 566
Mva1269I GAATGC 1 cut(s) 347
MvaI CCWGG 1 cut(s) 376
MwoI GCNNNNNNNGC 4 cut(s) 29, 463, 1034, 1310
NciI CCSGG 3 cut(s) 504, 505, 566
NdeII GATC 5 cut(s) 42, 103, 170, 520, 557
NlaIII CATG 4 cut(s) 73, 355, 446, 583
NlaIV GGNNCC 8 cut(s) 319, 320, 522, 623, 823, 954, 1007, 1101
NmeAIII GCCGAG 1 cut(s) 313
NmuCI GTSAC 3 cut(s) 130, 1051, 1127
NsiI ATGCAT 1 cut(s) 349
NspI RCATGY 1 cut(s) 583
NspV TTCGAA 1 cut(s) 308
OliI CACNNNNGTG 1 cut(s) 128
PaeI GCATGC 1 cut(s) 583
PctI GAATGC 1 cut(s) 347
PfeI GAWTC 3 cut(s) 73, 935, 1372
PflFI GACNNNGTC 1 cut(s) 431
PkrI GCNGC 4 cut(s) 179, 184, 848, 946
PleI GAGTC 2 cut(s) 130, 729
PpsI GAGTC 2 cut(s) 130, 729
PpuMI RGGWCCY 3 cut(s) 318, 622, 952
Psp124BI GAGCTC 1 cut(s) 1186
Psp5II RGGWCCY 3 cut(s) 318, 622, 952
Psp6I CCWGG 1 cut(s) 374
PspFI CCCAGC 1 cut(s) 218
PspGI CCWGG 1 cut(s) 374
PspN4I GGNNCC 8 cut(s) 319, 320, 522, 623, 823, 954, 1007, 1101
PspPI GGNCC 6 cut(s) 318, 622, 693, 701, 952, 1303
PspPPI RGGWCCY 3 cut(s) 318, 622, 952
PstI CTGCAG 1 cut(s) 1371
PsuI RGATCY 2 cut(s) 520, 557
PsyI GACNNNGTC 1 cut(s) 431
PvuII CAGCTG 1 cut(s) 16
RsaI GTAC 1 cut(s) 1138
RsaNI GTAC 1 cut(s) 1137
RseI CAYNNNNRTG 2 cut(s) 128, 584
SacI GAGCTC 1 cut(s) 1186
SalI GTCGAC 1 cut(s) 605
SatI GCNGC 4 cut(s) 178, 183, 847, 945
Sau3AI GATC 5 cut(s) 42, 103, 170, 520, 557
Sau96I GGNCC 6 cut(s) 318, 622, 693, 701, 952, 1303
SchI GAGTC 2 cut(s) 130, 729
ScrFI CCNGG 4 cut(s) 376, 504, 505, 566
SduI GDGCHC 2 cut(s) 1010, 1186
SfaNI GCATC 5 cut(s) 69, 205, 334, 775, 1034
SfcI CTRYAG 2 cut(s) 574, 1367
SfuI TTCGAA 1 cut(s) 308
SinI GGWCC 5 cut(s) 318, 622, 693, 701, 952
SmaI CCCGGG 1 cut(s) 505
SmiMI CAYNNNNRTG 2 cut(s) 128, 584
SmlI CTYRAG 2 cut(s) 296, 895
SmoI CTYRAG 2 cut(s) 296, 895
SphI GCATGC 1 cut(s) 583
Sse9I AATT 3 cut(s) 86, 492, 1298
SsiI CCGC 5 cut(s) 392, 944, 1037, 1062, 1326
SspMI CTAG 2 cut(s) 101, 1381
SstI GAGCTC 1 cut(s) 1186
StyD4I CCNGG 4 cut(s) 374, 502, 503, 564
StyI CCWWGG 3 cut(s) 61, 356, 948
TaaI ACNGT 3 cut(s) 697, 714, 1122
TaiI ACGT 1 cut(s) 1221
TaqI TCGA 7 cut(s) 173, 210, 308, 599, 606, 861, 969
TasI AATT 3 cut(s) 86, 492, 1298
TauI GCSGC 1 cut(s) 947
TfiI GAWTC 3 cut(s) 73, 935, 1372
TscAI CASTG 3 cut(s) 41, 1127, 1320
TseFI GTSAC 3 cut(s) 130, 1051, 1127
TseI GCWGC 3 cut(s) 177, 182, 846
Tsp45I GTSAC 3 cut(s) 130, 1051, 1127
TspDTI ATGAA 4 cut(s) 86, 340, 882, 1345
TspMI CCCGGG 1 cut(s) 503
TspRI CASTG 3 cut(s) 41, 1127, 1320
Tth111I GACNNNGTC 1 cut(s) 431
VpaK11BI GGWCC 5 cut(s) 318, 622, 693, 701, 952
XapI RAATTY 1 cut(s) 492
XbaI TCTAGA 1 cut(s) 100
XceI RCATGY 1 cut(s) 583
XcmI CCANNNNNNNNNTGG 1 cut(s) 1153
XmaI CCCGGG 1 cut(s) 503
XmiI GTMKAC 2 cut(s) 435, 606
XspI CTAG 2 cut(s) 101, 1381
Zsp2I ATGCAT 1 cut(s) 349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.