Rh6BG043100

UDP-glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
6917986 .. 6918585
600 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG043100.1

Sequence Viewer

Length: 600 bp
ATGGAGAAAGAACACAGAGCCTACAAATCTCACTGCTTGGTCTTACCCTATCCTAGCCAAGGACATATTAACCCTTTGTTCCAATTCTCTAAGCTGTTAGATCATAAACAAATCAAAGTCACATTGGTCACTACTCGTTTTACCTCCAAGACAATGCACAGAGGATCCAGTGGCATTGAGCTGGAGACAATCTCTGATGGTTACGACGAAGGTTGGAGAGACAAGGCAGAAAGTATACAAGCCTATATTGAGAGGTTTTGGCAAGTAGGACCAGAGACATTGACTGAGCTCTTGGAGAAGCTTTCGAGCTCAGGGTGCCCGGTTGACTGTATTGTTTATGATTCGGTCATGCCATGGGCTTTGGATGTTGCCAAGAAGTTTGGAATAGTTGGGGCTGCCTTCTTCACTCAGTCTTGTGTTGTTGACAACATCTACTATCATGTCAACAAAGGGCTGCTGAAACTTCCTCTTTCTGAATCTGAAACTTCGCTTCCCGGGATGCCACCACTTCGGCCCGTGGATTTTCCATCGTTTATGTATGATTTGGGGTCTTATCCAGCTTACTTTGATGTTGTTCTTGGTCAGTTCTCCAATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
Pfam Domains
Protein Families

Protein Analysis

199

Amino Acids

22.47

Weight (kDa)

5.66

Isoelectric Point (pI)

51.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 315
AccI GTMKAC 1 cut(s) 235
AclWI GGATC 2 cut(s) 159, 172
AfiI CCNNNNNNNGG 1 cut(s) 59
AluBI AGCT 6 cut(s) 94, 181, 289, 301, 309, 560
AluI AGCT 6 cut(s) 94, 181, 289, 301, 309, 560
Alw21I GWGCWC 2 cut(s) 291, 311
Alw26I GTCTC 3 cut(s) 179, 213, 269
AlwI GGATC 2 cut(s) 159, 172
Ama87I CYCGRG 1 cut(s) 494
AoxI GGCC 1 cut(s) 512
ApeKI GCWGC 2 cut(s) 395, 454
AspS9I GGNCC 2 cut(s) 269, 513
AsuC2I CCSGG 3 cut(s) 320, 495, 496
AvaI CYCGRG 1 cut(s) 494
AvaII GGWCC 1 cut(s) 269
BaeGI GKGCMC 1 cut(s) 320
BamHI GGATCC 1 cut(s) 164
BanI GGYRCC 1 cut(s) 315
BanII GRGCYC 2 cut(s) 291, 311
Bbv12I GWGCWC 2 cut(s) 291, 311
BbvI GCAGC 2 cut(s) 382, 441
BccI CCATC 2 cut(s) 191, 535
BcnI CCSGG 3 cut(s) 320, 495, 496
BcoDI GTCTC 3 cut(s) 179, 213, 269
BfaI CTAG 1 cut(s) 54
BisI GCNGC 2 cut(s) 396, 455
BlsI GCNGC 2 cut(s) 397, 456
Bme1390I CCNGG 3 cut(s) 320, 495, 496
Bme18I GGWCC 1 cut(s) 269
BmeT110I CYCGRG 1 cut(s) 494
BmgT120I GGNCC 2 cut(s) 269, 513
BmiI GGNNCC 2 cut(s) 166, 317
BmrFI CCNGG 3 cut(s) 320, 495, 496
BmsI GCATC 1 cut(s) 489
BplI GAGNNNNNCTC 2 cut(s) 176, 208
BpmI CTGGAG 1 cut(s) 203
Bpu10I CCTNAGC 1 cut(s) 310
BpuMI CCSGG 3 cut(s) 320, 495, 496
BsaJI CCNNGG 4 cut(s) 58, 353, 494, 516
Bsc4I CCNNNNNNNGG 1 cut(s) 59
Bse1I ACTGG 1 cut(s) 168
BseDI CCNNGG 4 cut(s) 58, 353, 494, 516
BseGI GGATG 2 cut(s) 370, 504
BseLI CCNNNNNNNGG 1 cut(s) 59
BseMII CTCAG 3 cut(s) 276, 324, 422
BseNI ACTGG 1 cut(s) 168
BseSI GKGCMC 1 cut(s) 320
BseXI GCAGC 2 cut(s) 382, 441
BshFI GGCC 1 cut(s) 514
BshNI GGYRCC 1 cut(s) 315
BsiHKAI GWGCWC 2 cut(s) 291, 311
BsiHKCI CYCGRG 1 cut(s) 494
BsiSI CCGG 2 cut(s) 320, 495
BslI CCNNNNNNNGG 1 cut(s) 59
BsmAI GTCTC 3 cut(s) 179, 213, 269
BsnI GGCC 1 cut(s) 514
BsoBI CYCGRG 1 cut(s) 494
Bsp1286I GDGCHC 3 cut(s) 291, 311, 320
Bsp143I GATC 2 cut(s) 100, 164
Bsp19I CCATGG 1 cut(s) 353
BspANI GGCC 1 cut(s) 514
BspCNI CTCAG 3 cut(s) 277, 323, 421
BspLI GGNNCC 2 cut(s) 166, 317
BspPI GGATC 2 cut(s) 159, 172
BspT107I GGYRCC 1 cut(s) 315
BsrI ACTGG 1 cut(s) 168
BssECI CCNNGG 4 cut(s) 58, 353, 494, 516
BssMI GATC 2 cut(s) 100, 164
BssNAI GTATAC 1 cut(s) 236
BssT1I CCWWGG 2 cut(s) 58, 353
Bst1107I GTATAC 1 cut(s) 236
Bst4CI ACNGT 1 cut(s) 329
BstDEI CTNAG 4 cut(s) 90, 285, 310, 408
BstDSI CCRYGG 2 cut(s) 353, 516
BstENI CCTNNNNNAGG 1 cut(s) 57
BstF5I GGATG 2 cut(s) 370, 504
BstKTI GATC 2 cut(s) 103, 167
BstMAI GTCTC 3 cut(s) 179, 213, 269
BstMBI GATC 2 cut(s) 100, 164
BstMWI GCNNNNNNNGC 1 cut(s) 315
BstSCI CCNGG 3 cut(s) 318, 493, 494
BstSLI GKGCMC 1 cut(s) 320
BstV1I GCAGC 2 cut(s) 382, 441
BstX2I RGATCY 1 cut(s) 164
BstYI RGATCY 1 cut(s) 164
BstZ17I GTATAC 1 cut(s) 236
BsuRI GGCC 1 cut(s) 514
BtgI CCRYGG 2 cut(s) 353, 516
BtsCI GGATG 2 cut(s) 370, 504
BtsI GCAGTG 1 cut(s) 31
BtsIMutI CAGTG 2 cut(s) 31, 175
Cfr13I GGNCC 2 cut(s) 269, 513
Cfr9I CCCGGG 1 cut(s) 494
CviAII CATG 3 cut(s) 349, 354, 440
DdeI CTNAG 4 cut(s) 90, 285, 310, 408
DpnI GATC 2 cut(s) 102, 166
DpnII GATC 2 cut(s) 100, 164
Ecl136II GAGCTC 2 cut(s) 289, 309
Eco130I CCWWGG 2 cut(s) 58, 353
Eco24I GRGCYC 2 cut(s) 291, 311
Eco47I GGWCC 1 cut(s) 269
Eco53kI GAGCTC 2 cut(s) 289, 309
Eco88I CYCGRG 1 cut(s) 494
EcoICRI GAGCTC 2 cut(s) 289, 309
EcoNI CCTNNNNNAGG 1 cut(s) 57
EcoT14I CCWWGG 2 cut(s) 58, 353
EcoT38I GRGCYC 2 cut(s) 291, 311
ErhI CCWWGG 2 cut(s) 58, 353
FaeI CATG 3 cut(s) 352, 357, 443
FatI CATG 3 cut(s) 348, 353, 439
FblI GTMKAC 1 cut(s) 235
Fnu4HI GCNGC 2 cut(s) 396, 455
FokI GGATG 2 cut(s) 377, 511
FriOI GRGCYC 2 cut(s) 291, 311
Fsp4HI GCNGC 2 cut(s) 396, 455
FspBI CTAG 1 cut(s) 54
GluI GCNGC 2 cut(s) 396, 455
GsuI CTGGAG 1 cut(s) 203
HaeIII GGCC 1 cut(s) 514
HapII CCGG 2 cut(s) 320, 495
Hin1II CATG 3 cut(s) 352, 357, 443
HincII GTYRAC 3 cut(s) 325, 424, 445
HindII GTYRAC 3 cut(s) 325, 424, 445
HindIII AAGCTT 1 cut(s) 299
HinfI GANTC 2 cut(s) 341, 476
HpaII CCGG 2 cut(s) 320, 495
Hpy166II GTNNAC 4 cut(s) 236, 325, 424, 445
Hpy188I TCNGA 3 cut(s) 196, 475, 481
Hpy8I GTNNAC 4 cut(s) 236, 325, 424, 445
Hpy99I CGWCG 1 cut(s) 209
HpyAV CCTTC 2 cut(s) 203, 409
HpyCH4III ACNGT 1 cut(s) 329
HpyCH4V TGCA 1 cut(s) 157
HpyF10VI GCNNNNNNNGC 1 cut(s) 315
HpyF3I CTNAG 4 cut(s) 90, 285, 310, 408
Hsp92II CATG 3 cut(s) 352, 357, 443
Kzo9I GATC 2 cut(s) 100, 164
LpnPI CCDG 7 cut(s) 167, 181, 285, 297, 333, 508, 570
Lsp1109I GCAGC 2 cut(s) 382, 441
LweI GCATC 1 cut(s) 489
MaeI CTAG 1 cut(s) 54
MaeIII GTNAC 3 cut(s) 118, 127, 200
MalI GATC 2 cut(s) 102, 166
MboI GATC 2 cut(s) 100, 164
MboII GAAGA 1 cut(s) 394
MflI RGATCY 1 cut(s) 164
MhlI GDGCHC 3 cut(s) 291, 311, 320
MluCI AATT 1 cut(s) 83
MmeI TCCRAC 1 cut(s) 194
MnlI CCTC 4 cut(s) 154, 155, 246, 477
MseI TTAA 2 cut(s) 69, 598
MspI CCGG 2 cut(s) 320, 495
MspR9I CCNGG 3 cut(s) 320, 495, 496
MwoI GCNNNNNNNGC 1 cut(s) 315
NciI CCSGG 3 cut(s) 320, 495, 496
NcoI CCATGG 1 cut(s) 353
NdeII GATC 2 cut(s) 100, 164
NlaIII CATG 3 cut(s) 352, 357, 443
NlaIV GGNNCC 2 cut(s) 166, 317
NmuCI GTSAC 2 cut(s) 118, 127
PfeI GAWTC 2 cut(s) 341, 476
PkrI GCNGC 2 cut(s) 397, 456
Psp124BI GAGCTC 2 cut(s) 291, 311
PspN4I GGNNCC 2 cut(s) 166, 317
PspPI GGNCC 2 cut(s) 269, 513
PsuI RGATCY 1 cut(s) 164
SacI GAGCTC 2 cut(s) 291, 311
SaqAI TTAA 2 cut(s) 69, 598
SatI GCNGC 2 cut(s) 396, 455
Sau3AI GATC 2 cut(s) 100, 164
Sau96I GGNCC 2 cut(s) 269, 513
ScrFI CCNGG 3 cut(s) 320, 495, 496
SduI GDGCHC 3 cut(s) 291, 311, 320
SetI ASST 9 cut(s) 96, 146, 183, 214, 257, 291, 303, 311, 562
SfaNI GCATC 1 cut(s) 489
SinI GGWCC 1 cut(s) 269
SmaI CCCGGG 1 cut(s) 496
Sse9I AATT 1 cut(s) 83
SspMI CTAG 1 cut(s) 54
SstI GAGCTC 2 cut(s) 291, 311
StyD4I CCNGG 3 cut(s) 318, 493, 494
StyI CCWWGG 2 cut(s) 58, 353
TaaI ACNGT 1 cut(s) 329
TaqI TCGA 1 cut(s) 305
TaqII GACCGA 1 cut(s) 334
TasI AATT 1 cut(s) 83
TfiI GAWTC 2 cut(s) 341, 476
Tru1I TTAA 2 cut(s) 69, 598
Tru9I TTAA 2 cut(s) 69, 598
TscAI CASTG 2 cut(s) 38, 175
TseFI GTSAC 2 cut(s) 118, 127
TseI GCWGC 2 cut(s) 395, 454
Tsp45I GTSAC 2 cut(s) 118, 127
TspMI CCCGGG 1 cut(s) 494
TspRI CASTG 2 cut(s) 38, 175
VpaK11BI GGWCC 1 cut(s) 269
XagI CCTNNNNNAGG 1 cut(s) 57
XmaI CCCGGG 1 cut(s) 494
XmiI GTMKAC 1 cut(s) 235
XspI CTAG 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.