MD10G1111300.v1.1

UDP-glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000284
Physical Location & Seq
Forward (+)
18283281 .. 18285122
1842 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1111300.v1.1.491

Sequence Viewer

Length: 1530 bp
ATGACTTGCCTGCCAAGGAAACAACATCTGCAGTTTCGTGGACCGATTGTGCACTACATCTTCCTCCTCCTATACAATTGGCTTCTACATTTTCGCCTAAATATTCAAACACATTTCCGTGCAAAGCTTCAAAGTTTGGAGCAGAAAATGGAGAAAGGACAGCTGAGAGCCTACAAAGCTCACTGCTTGATCTTACCCTATCCGAGCCAAGGCCACATTAATCCGATGCTCCAATTTGCCAAGCTTCTAGATCACAAAGAAGTGAGAGTCACACTCGTGACGACTCGCTTTCTCTACAAGACAATGCACAGTTCAGGATCGAGTTGCGCAGCTTGGGAGACCATCTCCGATGGCTTCGATGATACTGGGAAAGGGGACACAAACATAGACATCTATTTGGAGAGGTTCTGGCAAGTGGGGTCAAAAACCTTGGCCAAGCTTCTTGAGAAGCTTTCGAATTCAGGGTCCCCCGTGGATTGTGTTGTCTATGATGCATTCATGCCTTGGCCTTTGGATGTTGCCAAGAAGCTTGGAATAGCAGGGGCAGTTTTCTTCACTCAGTCTTGTGCCGTTGACAATGTCTACTACCATGTCCACAGAGGGCTGTTGAAGCTTCCTCTTGCTGATGGTCAGTCTCAAATTTTGCTTCCCGGGTTGCCAGCGCTTGATCCTTTGGACTTGCCATCGTTTGTTTCCGATTGTGGATCTTGCCCAGCTGTCTACAGAATGCTTGTGGGTCAGTTGTCGAATGTCGACAAAGCTGATTGGGCCCTGTGCAACACCTTTTATGACTTGGAAGAACAAGTGGTCGATTGGATGGCTAAGCTTTGGCGATTGAGGACCGTTGGACCAACTATACCGTCCAACTACTTGAATAAGCGACTCAAAGATGACAAAGAATACAGTGTCAACCTCTTCAAATCAGACAATGATGCTTGCATAAAATGGCTAAACGAGAGGCCAAAAGGTTCCGTAGCTTATGTATCGTTTGGCAGCCTAGCAGAACTCGAAGATGAACAAATGGAGGAGCTGGCTTGGGGCTTGAGGAGGAGCAAAAGTAGTTTCTTGTGGGTGGTTAGAGAATCAGAAGCAACCAAGGTCCCAAAAGGGTTTATCGAGGAGACATCCGAGAAGGGTTTAGTGGTTTCGTGGTGCCCCCAAATGGAGGTTTTGGCTCACGAGGCGGTTGGATGCTTCGTCACACATTGCGGTTGGAACTCAACTTTGGAGGCTTTGAGTTTGGGGGTTCCGATGGTGGCATTGCCACAGTGGAGTGACCAGCATACGAATGCCAAGTACATTATGGATGTGTGGGAAGTAGGGGTTAGAGCTCCAACTGATGAGAAAGGGGTTGTAAGACAAGTACTAGTAAAACAATGTATAAGTGAAGTAATGGAGGGGGAGAGAGGGAAAGAAATACAGAAGAACGCTGCGAAATGGAAAGAATTGGCCCGTAAAGCTGTGGATGAAGGCGGAAGCTCTGACAAAAACATCGACGAGTTTATTGCAAAATTGCAGACCCAAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

510

Amino Acids

57.59

Weight (kDa)

6.52

Isoelectric Point (pI)

41.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 323 - 439 1.9e-25 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 328
AccB1I GGYRCC 1 cut(s) 1152
AccI GTMKAC 3 cut(s) 582, 720, 753
AciI CCGC 3 cut(s) 1184, 1209, 1473
AclWI GGATC 3 cut(s) 325, 662, 712
AcoI YGGCCR 1 cut(s) 432
AcsI RAATTY 2 cut(s) 457, 639
AfaI GTAC 2 cut(s) 1298, 1365
AfeI AGCGCT 1 cut(s) 663
AfiI CCNNNNNNNGG 3 cut(s) 209, 1162, 1165
AgsI TTSAA 5 cut(s) 107, 131, 610, 874, 919
AhlI ACTAGT 1 cut(s) 1366
AjuI GAANNNNNNNTTGG 2 cut(s) 1208, 1240
AleI CACNNNNGTG 1 cut(s) 275
Alw21I GWGCWC 2 cut(s) 54, 1333
Alw26I GTCTC 3 cut(s) 332, 639, 1115
Alw44I GTGCAC 1 cut(s) 50
AlwI GGATC 3 cut(s) 325, 662, 712
Ama87I CYCGRG 1 cut(s) 650
Aor51HI AGCGCT 1 cut(s) 663
AoxI GGCC 6 cut(s) 211, 432, 506, 768, 959, 1449
ApaI GGGCCC 1 cut(s) 772
ApaLI GTGCAC 1 cut(s) 50
ApeKI GCWGC 3 cut(s) 329, 993, 1430
ApoI RAATTY 2 cut(s) 457, 639
ArsI GACNNNNNNTTYG 2 cut(s) 449, 481
AseI ATTAAT 1 cut(s) 219
AspLEI GCGC 2 cut(s) 329, 664
AspS9I GGNCC 8 cut(s) 41, 465, 768, 769, 840, 848, 1099, 1450
AsuC2I CCSGG 2 cut(s) 651, 652
AsuII TTCGAA 1 cut(s) 455
AvaI CYCGRG 1 cut(s) 650
AvaII GGWCC 5 cut(s) 41, 465, 840, 848, 1099
BaeGI GKGCMC 3 cut(s) 54, 772, 1157
BalI TGGCCA 1 cut(s) 434
BanI GGYRCC 1 cut(s) 1152
BanII GRGCYC 2 cut(s) 772, 1333
BauI CACGAG 2 cut(s) 275, 1178
Bbv12I GWGCWC 2 cut(s) 54, 1333
BbvI GCAGC 3 cut(s) 341, 1005, 1417
BccI CCATC 6 cut(s) 344, 350, 620, 691, 811, 1246
BceAI ACGGC 1 cut(s) 554
BcgI CGANNNNNNTGC 2 cut(s) 1487, 1521
BcnI CCSGG 2 cut(s) 651, 652
BcoDI GTCTC 3 cut(s) 332, 639, 1115
BcuI ACTAGT 1 cut(s) 1366
BfaI CTAG 4 cut(s) 248, 998, 1367, 1528
BfmI CTRYAG 2 cut(s) 29, 721
BfoI RGCGCY 1 cut(s) 665
BisI GCNGC 3 cut(s) 330, 994, 1431
BlpI GCTNAGC 1 cut(s) 822
BlsI GCNGC 3 cut(s) 331, 995, 1432
BmcAI AGTACT 1 cut(s) 1365
Bme1390I CCNGG 2 cut(s) 651, 652
Bme18I GGWCC 5 cut(s) 41, 465, 840, 848, 1099
BmeT110I CYCGRG 1 cut(s) 650
BmgT120I GGNCC 8 cut(s) 41, 465, 768, 769, 840, 848, 1099, 1450
BmiI GGNNCC 7 cut(s) 466, 467, 770, 970, 1101, 1154, 1248
BmrFI CCNGG 2 cut(s) 651, 652
BmrI ACTGGG 1 cut(s) 375
BmsI GCATC 4 cut(s) 216, 481, 922, 1181
BmuI ACTGGG 1 cut(s) 375
BplI GAGNNNNNCTC 4 cut(s) 258, 290, 329, 361
Bpu1102I GCTNAGC 1 cut(s) 822
Bpu14I TTCGAA 1 cut(s) 455
BpuEI CTTGAG 2 cut(s) 464, 1063
BpuMI CCSGG 2 cut(s) 651, 652
BsaI GGTCTC 1 cut(s) 332
BsaJI CCNNGG 7 cut(s) 14, 208, 429, 471, 503, 650, 1095
BsaXI ACNNNNNCTCC 2 cut(s) 1042, 1072
Bsc4I CCNNNNNNNGG 3 cut(s) 209, 1162, 1165
Bse1I ACTGG 1 cut(s) 370
Bse3DI GCAATG 2 cut(s) 1204, 1259
BseDI CCNNGG 7 cut(s) 14, 208, 429, 471, 503, 650, 1095
BseGI GGATG 6 cut(s) 520, 822, 1124, 1196, 1312, 1471
BseLI CCNNNNNNNGG 3 cut(s) 209, 1162, 1165
BseMI GCAATG 2 cut(s) 1204, 1259
BseMII CTCAG 2 cut(s) 155, 572
BseNI ACTGG 1 cut(s) 370
BseRI GAGGAG 5 cut(s) 56, 1040, 1060, 1063, 1133
BseSI GKGCMC 3 cut(s) 54, 772, 1157
BseXI GCAGC 3 cut(s) 341, 1005, 1417
BseYI CCCAGC 1 cut(s) 712
BshFI GGCC 6 cut(s) 213, 434, 508, 770, 961, 1451
BshNI GGYRCC 1 cut(s) 1152
BsiHKAI GWGCWC 2 cut(s) 54, 1333
BsiHKCI CYCGRG 1 cut(s) 650
BsiSI CCGG 1 cut(s) 651
BslFI GGGAC 3 cut(s) 389, 451, 1085
BslI CCNNNNNNNGG 3 cut(s) 209, 1162, 1165
BsmAI GTCTC 3 cut(s) 332, 639, 1115
BsmFI GGGAC 3 cut(s) 389, 451, 1085
BsmI GAATGC 3 cut(s) 494, 732, 1294
BsnI GGCC 6 cut(s) 213, 434, 508, 770, 961, 1451
Bso31I GGTCTC 1 cut(s) 332
BsoBI CYCGRG 1 cut(s) 650
Bsp119I TTCGAA 1 cut(s) 455
Bsp120I GGGCCC 1 cut(s) 768
Bsp1286I GDGCHC 4 cut(s) 54, 772, 1157, 1333
Bsp143I GATC 5 cut(s) 189, 250, 317, 667, 704
Bsp1720I GCTNAGC 1 cut(s) 822
BspACI CCGC 3 cut(s) 1184, 1209, 1473
BspANI GGCC 6 cut(s) 213, 434, 508, 770, 961, 1451
BspCNI CTCAG 2 cut(s) 156, 571
BspLI GGNNCC 7 cut(s) 466, 467, 770, 970, 1101, 1154, 1248
BspMAI CTGCAG 1 cut(s) 33
BspPI GGATC 3 cut(s) 325, 662, 712
BspT104I TTCGAA 1 cut(s) 455
BspT107I GGYRCC 1 cut(s) 1152
BspTNI GGTCTC 1 cut(s) 332
BsrDI GCAATG 2 cut(s) 1204, 1259
BsrI ACTGG 1 cut(s) 370
BssECI CCNNGG 7 cut(s) 14, 208, 429, 471, 503, 650, 1095
BssMI GATC 5 cut(s) 189, 250, 317, 667, 704
BssSI CACGAG 2 cut(s) 275, 1178
BssT1I CCWWGG 5 cut(s) 14, 208, 429, 503, 1095
Bst2BI CACGAG 2 cut(s) 275, 1178
Bst4CI ACNGT 5 cut(s) 311, 844, 861, 905, 1269
Bst6I CTCTTC 1 cut(s) 920
BstBI TTCGAA 1 cut(s) 455
BstC8I GCNNGC 4 cut(s) 11, 660, 937, 1032
BstDEI CTNAG 3 cut(s) 164, 558, 822
BstDSI CCRYGG 1 cut(s) 471
BstF5I GGATG 6 cut(s) 520, 822, 1124, 1196, 1312, 1471
BstH2I RGCGCY 1 cut(s) 665
BstHHI GCGC 2 cut(s) 329, 664
BstKTI GATC 5 cut(s) 192, 253, 320, 670, 707
BstMAI GTCTC 3 cut(s) 332, 639, 1115
BstMBI GATC 5 cut(s) 189, 250, 317, 667, 704
BstMWI GCNNNNNNNGC 5 cut(s) 176, 610, 767, 1181, 1457
BstSCI CCNGG 2 cut(s) 649, 650
BstSFI CTRYAG 2 cut(s) 29, 721
BstSLI GKGCMC 3 cut(s) 54, 772, 1157
BstV1I GCAGC 3 cut(s) 341, 1005, 1417
BstX2I RGATCY 1 cut(s) 704
BstYI RGATCY 1 cut(s) 704
BsuRI GGCC 6 cut(s) 213, 434, 508, 770, 961, 1451
BtgI CCRYGG 1 cut(s) 471
BtsCI GGATG 6 cut(s) 520, 822, 1124, 1196, 1312, 1471
BtsI GCAGTG 1 cut(s) 181
BtsIMutI CAGTG 3 cut(s) 181, 910, 1274
Cac8I GCNNGC 4 cut(s) 11, 660, 937, 1032
CfoI GCGC 2 cut(s) 329, 664
Cfr13I GGNCC 8 cut(s) 41, 465, 768, 769, 840, 848, 1099, 1450
Cfr9I CCCGGG 1 cut(s) 650
Csp6I GTAC 2 cut(s) 1297, 1364
CviAII CATG 2 cut(s) 499, 590
CviQI GTAC 2 cut(s) 1297, 1364
DdeI CTNAG 3 cut(s) 164, 558, 822
DpnI GATC 5 cut(s) 191, 252, 319, 669, 706
DpnII GATC 5 cut(s) 189, 250, 317, 667, 704
EaeI YGGCCR 1 cut(s) 432
Eam1104I CTCTTC 1 cut(s) 920
EarI CTCTTC 1 cut(s) 920
EciI GGCGGA 1 cut(s) 1488
Ecl136II GAGCTC 1 cut(s) 1331
Eco130I CCWWGG 5 cut(s) 14, 208, 429, 503, 1095
Eco24I GRGCYC 2 cut(s) 772, 1333
Eco31I GGTCTC 1 cut(s) 332
Eco47I GGWCC 5 cut(s) 41, 465, 840, 848, 1099
Eco47III AGCGCT 1 cut(s) 663
Eco53kI GAGCTC 1 cut(s) 1331
Eco88I CYCGRG 1 cut(s) 650
EcoICRI GAGCTC 1 cut(s) 1331
EcoO109I RGGNCCY 3 cut(s) 465, 769, 1099
EcoRI GAATTC 1 cut(s) 457
EcoT14I CCWWGG 5 cut(s) 14, 208, 429, 503, 1095
EcoT22I ATGCAT 1 cut(s) 496
EcoT38I GRGCYC 2 cut(s) 772, 1333
ErhI CCWWGG 5 cut(s) 14, 208, 429, 503, 1095
FaeI CATG 2 cut(s) 502, 593
FaqI GGGAC 3 cut(s) 389, 451, 1085
FatI CATG 2 cut(s) 498, 589
FblI GTMKAC 3 cut(s) 582, 720, 753
Fnu4HI GCNGC 3 cut(s) 330, 994, 1431
FokI GGATG 6 cut(s) 527, 829, 1111, 1203, 1319, 1478
FriOI GRGCYC 2 cut(s) 772, 1333
Fsp4HI GCNGC 3 cut(s) 330, 994, 1431
FspBI CTAG 4 cut(s) 248, 998, 1367, 1528
FspI TGCGCA 1 cut(s) 328
GlaI GCGC 2 cut(s) 328, 663
GluI GCNGC 3 cut(s) 330, 994, 1431
GsaI CCCAGC 1 cut(s) 716
HaeII RGCGCY 1 cut(s) 665
HaeIII GGCC 6 cut(s) 213, 434, 508, 770, 961, 1451
HapII CCGG 1 cut(s) 651
HhaI GCGC 2 cut(s) 329, 664
Hin1II CATG 2 cut(s) 502, 593
Hin6I GCGC 2 cut(s) 327, 662
HinP1I GCGC 2 cut(s) 327, 662
HincII GTYRAC 3 cut(s) 574, 754, 910
HindII GTYRAC 3 cut(s) 574, 754, 910
HindIII AAGCTT 7 cut(s) 125, 242, 437, 449, 527, 611, 824
HinfI GANTC 4 cut(s) 267, 283, 882, 1082
HpaII CCGG 1 cut(s) 651
Hpy166II GTNNAC 8 cut(s) 41, 52, 574, 583, 595, 721, 754, 910
Hpy188I TCNGA 9 cut(s) 204, 225, 349, 697, 925, 1087, 1129, 1251, 1483
Hpy188III TCNNGA 5 cut(s) 248, 277, 315, 443, 1178
Hpy8I GTNNAC 8 cut(s) 41, 52, 574, 583, 595, 721, 754, 910
Hpy99I CGWCG 1 cut(s) 1499
HpyAV CCTTC 2 cut(s) 1126, 1463
HpyCH4III ACNGT 5 cut(s) 311, 844, 861, 905, 1269
HpyCH4V TGCA 9 cut(s) 31, 52, 122, 307, 494, 777, 939, 1508, 1516
HpyF10VI GCNNNNNNNGC 5 cut(s) 176, 610, 767, 1181, 1457
HpyF3I CTNAG 3 cut(s) 164, 558, 822
Hsp92II CATG 2 cut(s) 502, 593
HspAI GCGC 2 cut(s) 327, 662
KflI GGGWCCC 1 cut(s) 465
Kzo9I GATC 5 cut(s) 189, 250, 317, 667, 704
LmnI GCTCC 5 cut(s) 139, 234, 1027, 1050, 1336
Lsp1109I GCAGC 3 cut(s) 341, 1005, 1417
LweI GCATC 4 cut(s) 216, 481, 922, 1181
MaeI CTAG 4 cut(s) 248, 998, 1367, 1528
MaeIII GTNAC 4 cut(s) 268, 277, 1198, 1274
MalI GATC 5 cut(s) 191, 252, 319, 669, 706
MboI GATC 5 cut(s) 189, 250, 317, 667, 704
MboII GAAGA 6 cut(s) 52, 544, 809, 907, 1022, 1435
MfeI CAATTG 1 cut(s) 76
MflI RGATCY 1 cut(s) 704
MhlI GDGCHC 4 cut(s) 54, 772, 1157, 1333
MlsI TGGCCA 1 cut(s) 434
MluCI AATT 6 cut(s) 76, 233, 457, 639, 1445, 1511
MluNI TGGCCA 1 cut(s) 434
MlyI GAGTC 3 cut(s) 276, 277, 876
MmeI TCCRAC 5 cut(s) 826, 888, 1168, 1193, 1358
Mox20I TGGCCA 1 cut(s) 434
Mph1103I ATGCAT 1 cut(s) 496
MscI TGGCCA 1 cut(s) 434
MseI TTAA 1 cut(s) 219
MslI CAYNNNNRTG 3 cut(s) 117, 275, 1287
Msp20I TGGCCA 1 cut(s) 434
MspA1I CMGCKG 2 cut(s) 163, 716
MspI CCGG 1 cut(s) 651
MspR9I CCNGG 2 cut(s) 651, 652
MunI CAATTG 1 cut(s) 76
Mva1269I GAATGC 3 cut(s) 494, 732, 1294
MwoI GCNNNNNNNGC 5 cut(s) 176, 610, 767, 1181, 1457
NciI CCSGG 2 cut(s) 651, 652
NdeII GATC 5 cut(s) 189, 250, 317, 667, 704
NlaIII CATG 2 cut(s) 502, 593
NlaIV GGNNCC 7 cut(s) 466, 467, 770, 970, 1101, 1154, 1248
NmuCI GTSAC 4 cut(s) 268, 277, 1198, 1274
NsbI TGCGCA 1 cut(s) 328
NsiI ATGCAT 1 cut(s) 496
NspV TTCGAA 1 cut(s) 455
OliI CACNNNNGTG 1 cut(s) 275
PctI GAATGC 3 cut(s) 494, 732, 1294
PfeI GAWTC 1 cut(s) 1082
PflFI GACNNNGTC 1 cut(s) 578
PkrI GCNGC 3 cut(s) 331, 995, 1432
PleI GAGTC 3 cut(s) 275, 277, 876
PpsI GAGTC 3 cut(s) 275, 277, 876
PpuMI RGGWCCY 2 cut(s) 465, 1099
PshBI ATTAAT 1 cut(s) 219
Psp124BI GAGCTC 1 cut(s) 1333
Psp5II RGGWCCY 2 cut(s) 465, 1099
PspFI CCCAGC 1 cut(s) 712
PspN4I GGNNCC 7 cut(s) 466, 467, 770, 970, 1101, 1154, 1248
PspOMI GGGCCC 1 cut(s) 768
PspPI GGNCC 8 cut(s) 41, 465, 768, 769, 840, 848, 1099, 1450
PspPPI RGGWCCY 2 cut(s) 465, 1099
PstI CTGCAG 1 cut(s) 33
PsuI RGATCY 1 cut(s) 704
PsyI GACNNNGTC 1 cut(s) 578
PvuII CAGCTG 2 cut(s) 163, 716
RsaI GTAC 2 cut(s) 1298, 1365
RsaNI GTAC 2 cut(s) 1297, 1364
RseI CAYNNNNRTG 3 cut(s) 117, 275, 1287
SacI GAGCTC 1 cut(s) 1333
SalI GTCGAC 1 cut(s) 752
SaqAI TTAA 1 cut(s) 219
SatI GCNGC 3 cut(s) 330, 994, 1431
Sau3AI GATC 5 cut(s) 189, 250, 317, 667, 704
Sau96I GGNCC 8 cut(s) 41, 465, 768, 769, 840, 848, 1099, 1450
ScaI AGTACT 1 cut(s) 1365
SchI GAGTC 3 cut(s) 276, 277, 876
ScrFI CCNGG 2 cut(s) 651, 652
SduI GDGCHC 4 cut(s) 54, 772, 1157, 1333
SfaNI GCATC 4 cut(s) 216, 481, 922, 1181
SfcI CTRYAG 2 cut(s) 29, 721
SfuI TTCGAA 1 cut(s) 455
SinI GGWCC 5 cut(s) 41, 465, 840, 848, 1099
SmaI CCCGGG 1 cut(s) 652
SmiMI CAYNNNNRTG 3 cut(s) 117, 275, 1287
SmlI CTYRAG 2 cut(s) 443, 1042
SmoI CTYRAG 2 cut(s) 443, 1042
SpeI ACTAGT 1 cut(s) 1366
Sse9I AATT 6 cut(s) 76, 233, 457, 639, 1445, 1511
SsiI CCGC 3 cut(s) 1184, 1209, 1473
SspI AATATT 1 cut(s) 103
SspMI CTAG 4 cut(s) 248, 998, 1367, 1528
SstI GAGCTC 1 cut(s) 1333
StyD4I CCNGG 2 cut(s) 649, 650
StyI CCWWGG 5 cut(s) 14, 208, 429, 503, 1095
TaaI ACNGT 5 cut(s) 311, 844, 861, 905, 1269
TaqI TCGA 9 cut(s) 320, 357, 455, 746, 753, 810, 1008, 1116, 1494
TaqII GACCGA 1 cut(s) 58
TasI AATT 6 cut(s) 76, 233, 457, 639, 1445, 1511
TatI WGTACW 2 cut(s) 1296, 1363
TfiI GAWTC 1 cut(s) 1082
Tru1I TTAA 1 cut(s) 219
Tru9I TTAA 1 cut(s) 219
TscAI CASTG 3 cut(s) 188, 910, 1274
TseFI GTSAC 4 cut(s) 268, 277, 1198, 1274
TseI GCWGC 3 cut(s) 329, 993, 1430
Tsp45I GTSAC 4 cut(s) 268, 277, 1198, 1274
TspDTI ATGAA 3 cut(s) 487, 1029, 1482
TspGWI ACGGA 2 cut(s) 107, 961
TspMI CCCGGG 1 cut(s) 650
TspRI CASTG 3 cut(s) 188, 910, 1274
Tth111I GACNNNGTC 1 cut(s) 578
VneI GTGCAC 1 cut(s) 50
VpaK11BI GGWCC 5 cut(s) 41, 465, 840, 848, 1099
VspI ATTAAT 1 cut(s) 219
XapI RAATTY 2 cut(s) 457, 639
XbaI TCTAGA 1 cut(s) 247
XcmI CCANNNNNNNNNTGG 1 cut(s) 1300
XmaI CCCGGG 1 cut(s) 650
XmiI GTMKAC 3 cut(s) 582, 720, 753
XspI CTAG 4 cut(s) 248, 998, 1367, 1528
ZrmI AGTACT 1 cut(s) 1365
Zsp2I ATGCAT 1 cut(s) 496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.