Rroxscaffold_7G00213400

UDP-glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000284
Physical Location & Seq
Forward (+)
63861166 .. 63862762
1597 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00213400.1

Sequence Viewer

Length: 1380 bp
ATGGAGAAGGGTCAACAAAGAGCCTACAGAGCTCACTGTTTGGTCTTACCCTATCCTGACCAAGGCCATATCAATCCCATGCTCCAATTCTCTAAGCTTTTAGATCATAAAGGAGTCAAAGTGACACTGGTCACCACTCGGTTTTTATGCAAGACAATGCACAGGTCAGGGTCCAGGCGTATTCCACTGGAGACGATCTCTGATGGTTATGATGAAGGTGGGAGAGCACAAGCAGAAAGCATAGATGTTTATTTGGAGAGCTTGAGGAAATCAGGGTCACAAACTTTGGCTGAGCTTCTTGAGAAGCTTTCAAGCTCAGGGTTACCGGTTGATTGTATTGTTTATGATGCATTCATGCCTTGGCCTCTGGATATTGCCAAGAAATTTGGGATTCTTGGGGCTATTTTCTTCACACAGTCATGTGCTGTTGACACCATCTACTGCCATGTGAAAAATGGATTGCTGAAACTTCCTGTGGTTGAGTCTGAAATATCGCTTCCGGGGTTGCCAACACTTAAGCCCTCAGACCTTCCATCCTTTCTATCTGATTTTGGGTCTTACCCGGCCGCCTATAAATTAGTTGTTGTGGATCAGTTCTCCAATGTTGACAAGGCTGATTGGGTCCTCTGCAATACATTTTATGAGTTGGAAGAACAACCGGTGGATTGGATGACAAAGTTTTGGCCAATGAAGACCATTGGACCAACTATACCATCTCAATACTTGGATAAGCGTCTTGAAGATGATAAAGACTATGGTTTCAACATGTTTAAACCAAAGAGTGATGCCTGCATGAAATGGCTCAATGAACAGCCAAAGGGGTCTATTGTTTATGTGTCATTTGGCAGCCGAGCAGAAATTGAAGCTGAGCAAATGGAGGAACTGGCTTTTGGATTGACAAGTAGTAAAAGAAAATTCTTGTGGGTGATTAGAGAATCAGAAGCAAGGAAGGTCCCGAAAGGGTTTGTGGAGGAGACATCTGCAAAGGGATTTGTGGTTTCCTGGTGTCCCCAACTGGATGTTTTGGCTCATGAAGCAGTTGGTTGCTTCATTACACATTGTGGTTGGAACTCCACATTGGAGGCTTTGAGTTTGGGGGTTCCAATGGTTGCAATGCCTCGATGGACCGACCAAAGCACCAATGCCAAGTACATTATGGATGTGTGGAAAATTGGGATCAGAGCTCAAGTTGATGAGAAAGGGATTGTGAGGCAAGAAGAAGTAGAGCATTGTGTAAGTGAAATATTGGAGGGAGAGAGGGGAAATGAAATACAAAAGAATGCTATAGCATTGAAAGAATTGGCTAGAAAGGCTGTGGATGAAGGTGGAAGTTCTAACAAGAACATTGATGAGTTCATTGCAAGTATGGTTGATCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko00380 ko00966 ko01110 ko01210 map00380 map00966 map01110 map01210
Pfam Domains
Protein Families
UDPGT

Protein Analysis

459

Amino Acids

51.62

Weight (kDa)

5.49

Isoelectric Point (pI)

40.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 257 - 419 9.9e-27 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 567
AclWI GGATC 2 cut(s) 597, 1184
AcoI YGGCCR 2 cut(s) 564, 683
AcsI RAATTY 2 cut(s) 383, 914
AdeI CACNNNGTG 1 cut(s) 1061
AfaI GTAC 1 cut(s) 1151
AfiI CCNNNNNNNGG 1 cut(s) 62
AflII CTTAAG 1 cut(s) 515
AflIII ACRYGT 1 cut(s) 765
AgeI ACCGGT 2 cut(s) 325, 658
AgsI TTSAA 5 cut(s) 312, 740, 763, 863, 1294
AjnI CCWGG 2 cut(s) 173, 1001
AjuI GAANNNNNNNTTGG 4 cut(s) 873, 905, 1061, 1093
AluBI AGCT 8 cut(s) 32, 97, 261, 295, 307, 315, 866, 1184
AluI AGCT 8 cut(s) 32, 97, 261, 295, 307, 315, 866, 1184
Alw21I GWGCWC 3 cut(s) 34, 229, 1186
Alw26I GTCTC 2 cut(s) 185, 968
AlwI GGATC 2 cut(s) 597, 1184
AoxI GGCC 4 cut(s) 64, 362, 564, 683
ApeKI GCWGC 1 cut(s) 846
ApoI RAATTY 2 cut(s) 383, 914
AsiGI ACCGGT 2 cut(s) 325, 658
AspS9I GGNCC 5 cut(s) 171, 622, 701, 952, 1125
AsuC2I CCSGG 2 cut(s) 501, 563
AsuHPI GGTGA 2 cut(s) 124, 937
AvaII GGWCC 5 cut(s) 171, 622, 701, 952, 1125
BalI TGGCCA 1 cut(s) 685
BanII GRGCYC 2 cut(s) 34, 1186
BbsI GAAGAC 1 cut(s) 698
Bbv12I GWGCWC 3 cut(s) 34, 229, 1186
BbvI GCAGC 1 cut(s) 858
BccI CCATC 5 cut(s) 197, 443, 541, 721, 1116
BciT130I CCWGG 2 cut(s) 175, 1003
BcnI CCSGG 2 cut(s) 501, 563
BcoDI GTCTC 2 cut(s) 185, 968
BfaI CTAG 1 cut(s) 1305
BfmI CTRYAG 2 cut(s) 25, 1284
BfrI CTTAAG 1 cut(s) 515
BisI GCNGC 2 cut(s) 567, 847
BlpI GCTNAGC 2 cut(s) 291, 867
BlsI GCNGC 2 cut(s) 568, 848
Bme1390I CCNGG 4 cut(s) 175, 501, 563, 1003
Bme18I GGWCC 5 cut(s) 171, 622, 701, 952, 1125
BmgT120I GGNCC 5 cut(s) 171, 622, 701, 952, 1125
BmiI GGNNCC 4 cut(s) 172, 623, 954, 1101
BmrFI CCNGG 4 cut(s) 175, 501, 563, 1003
BmsI GCATC 2 cut(s) 337, 775
BoxI GACNNNNGTC 1 cut(s) 128
BpiI GAAGAC 1 cut(s) 698
BplI GAGNNNNNCTC 2 cut(s) 182, 214
BpmI CTGGAG 1 cut(s) 209
Bpu10I CCTNAGC 1 cut(s) 316
Bpu1102I GCTNAGC 2 cut(s) 291, 867
BpuEI CTTGAG 3 cut(s) 283, 320, 1170
BpuMI CCSGG 2 cut(s) 501, 563
BsaJI CCNNGG 3 cut(s) 61, 359, 500
BsaWI WCCGGW 2 cut(s) 325, 658
BsaXI ACNNNNNCTCC 2 cut(s) 105, 135
Bsc4I CCNNNNNNNGG 1 cut(s) 62
Bse118I RCCGGY 2 cut(s) 325, 658
Bse1I ACTGG 4 cut(s) 132, 192, 888, 1020
Bse3DI GCAATG 2 cut(s) 1119, 1356
BseBI CCWGG 2 cut(s) 175, 1003
BseDI CCNNGG 3 cut(s) 61, 359, 500
BseGI GGATG 5 cut(s) 533, 675, 1024, 1165, 1324
BseLI CCNNNNNNNGG 1 cut(s) 62
BseMI GCAATG 2 cut(s) 1119, 1356
BseMII CTCAG 4 cut(s) 282, 330, 537, 858
BseNI ACTGG 4 cut(s) 132, 192, 888, 1020
BseRI GAGGAG 1 cut(s) 986
BseX3I CGGCCG 1 cut(s) 564
BseXI GCAGC 1 cut(s) 858
Bsh1285I CGRYCG 1 cut(s) 567
BshFI GGCC 4 cut(s) 66, 364, 566, 685
BshTI ACCGGT 2 cut(s) 325, 658
BsiEI CGRYCG 1 cut(s) 567
BsiHKAI GWGCWC 3 cut(s) 34, 229, 1186
BsiSI CCGG 4 cut(s) 326, 500, 563, 659
BslFI GGGAC 2 cut(s) 938, 993
BslI CCNNNNNNNGG 1 cut(s) 62
BsmAI GTCTC 2 cut(s) 185, 968
BsmBI CGTCTC 1 cut(s) 185
BsmFI GGGAC 2 cut(s) 938, 993
BsmI GAATGC 2 cut(s) 350, 1285
BsnI GGCC 4 cut(s) 66, 364, 566, 685
Bsp1286I GDGCHC 3 cut(s) 34, 229, 1186
Bsp143I GATC 5 cut(s) 103, 195, 589, 1176, 1372
Bsp1720I GCTNAGC 2 cut(s) 291, 867
BspACI CCGC 1 cut(s) 567
BspANI GGCC 4 cut(s) 66, 364, 566, 685
BspCNI CTCAG 4 cut(s) 283, 329, 536, 859
BspHI TCATGA 1 cut(s) 1030
BspLI GGNNCC 4 cut(s) 172, 623, 954, 1101
BspPI GGATC 2 cut(s) 597, 1184
BspTI CTTAAG 1 cut(s) 515
BsrDI GCAATG 2 cut(s) 1119, 1356
BsrFI RCCGGY 2 cut(s) 325, 658
BsrI ACTGG 4 cut(s) 132, 192, 888, 1020
BssAI RCCGGY 2 cut(s) 325, 658
BssECI CCNNGG 3 cut(s) 61, 359, 500
BssMI GATC 5 cut(s) 103, 195, 589, 1176, 1372
BssT1I CCWWGG 2 cut(s) 61, 359
Bst2UI CCWGG 2 cut(s) 175, 1003
Bst4CI ACNGT 2 cut(s) 38, 417
BstAFI CTTAAG 1 cut(s) 515
BstC8I GCNNGC 1 cut(s) 790
BstDEI CTNAG 5 cut(s) 93, 291, 316, 523, 867
BstEII GGTNACC 2 cut(s) 130, 321
BstENI CCTNNNNNAGG 1 cut(s) 60
BstF5I GGATG 5 cut(s) 533, 675, 1024, 1165, 1324
BstKTI GATC 5 cut(s) 106, 198, 592, 1179, 1375
BstMAI GTCTC 2 cut(s) 185, 968
BstMBI GATC 5 cut(s) 103, 195, 589, 1176, 1372
BstMCI CGRYCG 1 cut(s) 567
BstMWI GCNNNNNNNGC 3 cut(s) 29, 1034, 1310
BstNI CCWGG 2 cut(s) 175, 1003
BstNSI RCATGY 1 cut(s) 769
BstPAI GACNNNNGTC 1 cut(s) 128
BstPI GGTNACC 2 cut(s) 130, 321
BstSCI CCNGG 4 cut(s) 173, 499, 561, 1001
BstSFI CTRYAG 2 cut(s) 25, 1284
BstV1I GCAGC 1 cut(s) 858
BstV2I GAAGAC 1 cut(s) 698
BstZI CGGCCG 1 cut(s) 564
BsuRI GGCC 4 cut(s) 66, 364, 566, 685
BtsCI GGATG 5 cut(s) 533, 675, 1024, 1165, 1324
BtsIMutI CAGTG 3 cut(s) 34, 125, 185
Cac8I GCNNGC 1 cut(s) 790
CciI TCATGA 1 cut(s) 1030
Cfr10I RCCGGY 2 cut(s) 325, 658
Cfr13I GGNCC 5 cut(s) 171, 622, 701, 952, 1125
CseI GACGC 1 cut(s) 722
Csp6I GTAC 1 cut(s) 1150
CspAI ACCGGT 2 cut(s) 325, 658
CviAII CATG 7 cut(s) 79, 355, 420, 446, 766, 793, 1031
CviQI GTAC 1 cut(s) 1150
DdeI CTNAG 5 cut(s) 93, 291, 316, 523, 867
DpnI GATC 5 cut(s) 105, 197, 591, 1178, 1374
DpnII GATC 5 cut(s) 103, 195, 589, 1176, 1372
DraI TTTAAA 1 cut(s) 772
DraIII CACNNNGTG 1 cut(s) 1061
EaeI YGGCCR 2 cut(s) 564, 683
EagI CGGCCG 1 cut(s) 564
Ecl136II GAGCTC 2 cut(s) 32, 1184
EclXI CGGCCG 1 cut(s) 564
Eco130I CCWWGG 2 cut(s) 61, 359
Eco24I GRGCYC 2 cut(s) 34, 1186
Eco47I GGWCC 5 cut(s) 171, 622, 701, 952, 1125
Eco52I CGGCCG 1 cut(s) 564
Eco53kI GAGCTC 2 cut(s) 32, 1184
Eco91I GGTNACC 2 cut(s) 130, 321
EcoICRI GAGCTC 2 cut(s) 32, 1184
EcoNI CCTNNNNNAGG 1 cut(s) 60
EcoO109I RGGNCCY 2 cut(s) 622, 952
EcoO65I GGTNACC 2 cut(s) 130, 321
EcoRII CCWGG 2 cut(s) 173, 1001
EcoT14I CCWWGG 2 cut(s) 61, 359
EcoT22I ATGCAT 1 cut(s) 352
EcoT38I GRGCYC 2 cut(s) 34, 1186
ErhI CCWWGG 2 cut(s) 61, 359
Esp3I CGTCTC 1 cut(s) 185
FaeI CATG 7 cut(s) 82, 358, 423, 449, 769, 796, 1034
FaqI GGGAC 2 cut(s) 938, 993
FatI CATG 7 cut(s) 78, 354, 419, 445, 765, 792, 1030
Fnu4HI GCNGC 2 cut(s) 567, 847
FokI GGATG 5 cut(s) 520, 682, 1031, 1172, 1331
FriOI GRGCYC 2 cut(s) 34, 1186
Fsp4HI GCNGC 2 cut(s) 567, 847
FspBI CTAG 1 cut(s) 1305
GluI GCNGC 2 cut(s) 567, 847
GsuI CTGGAG 1 cut(s) 209
HaeIII GGCC 4 cut(s) 66, 364, 566, 685
HapII CCGG 4 cut(s) 326, 500, 563, 659
HgaI GACGC 1 cut(s) 722
Hin1II CATG 7 cut(s) 82, 358, 423, 449, 769, 796, 1034
HincII GTYRAC 3 cut(s) 14, 430, 607
HindII GTYRAC 3 cut(s) 14, 430, 607
HindIII AAGCTT 2 cut(s) 95, 305
HinfI GANTC 4 cut(s) 114, 391, 482, 935
HpaII CCGG 4 cut(s) 326, 500, 563, 659
HphI GGTGA 2 cut(s) 124, 937
Hpy166II GTNNAC 3 cut(s) 14, 430, 607
Hpy188I TCNGA 6 cut(s) 202, 487, 526, 547, 940, 1181
Hpy188III TCNNGA 6 cut(s) 56, 299, 368, 737, 955, 1031
Hpy8I GTNNAC 3 cut(s) 14, 430, 607
HpyAV CCTTC 4 cut(s) 209, 539, 943, 1316
HpyCH4III ACNGT 2 cut(s) 38, 417
HpyCH4V TGCA 8 cut(s) 150, 160, 350, 630, 792, 983, 1112, 1361
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 1034, 1310
HpyF3I CTNAG 5 cut(s) 93, 291, 316, 523, 867
Hsp92II CATG 7 cut(s) 82, 358, 423, 449, 769, 796, 1034
Kzo9I GATC 5 cut(s) 103, 195, 589, 1176, 1372
LmnI GCTCC 1 cut(s) 87
Lsp1109I GCAGC 1 cut(s) 858
LweI GCATC 2 cut(s) 337, 775
MaeI CTAG 1 cut(s) 1305
MaeIII GTNAC 4 cut(s) 121, 130, 276, 321
MalI GATC 5 cut(s) 105, 197, 591, 1178, 1374
MboI GATC 5 cut(s) 103, 195, 589, 1176, 1372
MboII GAAGA 5 cut(s) 400, 662, 703, 752, 1229
MhlI GDGCHC 3 cut(s) 34, 229, 1186
MlsI TGGCCA 1 cut(s) 685
MluCI AATT 7 cut(s) 86, 383, 575, 858, 914, 1170, 1298
MluNI TGGCCA 1 cut(s) 685
MlyI GAGTC 2 cut(s) 123, 491
MmeI TCCRAC 2 cut(s) 627, 1046
Mox20I TGGCCA 1 cut(s) 685
Mph1103I ATGCAT 1 cut(s) 352
MscI TGGCCA 1 cut(s) 685
MseI TTAA 2 cut(s) 516, 771
MslI CAYNNNNRTG 1 cut(s) 418
Msp20I TGGCCA 1 cut(s) 685
MspCI CTTAAG 1 cut(s) 515
MspI CCGG 4 cut(s) 326, 500, 563, 659
MspR9I CCNGG 4 cut(s) 175, 501, 563, 1003
MssI GTTTAAAC 1 cut(s) 772
Mva1269I GAATGC 2 cut(s) 350, 1285
MvaI CCWGG 2 cut(s) 175, 1003
MwoI GCNNNNNNNGC 3 cut(s) 29, 1034, 1310
NciI CCSGG 2 cut(s) 501, 563
NdeII GATC 5 cut(s) 103, 195, 589, 1176, 1372
NlaIII CATG 7 cut(s) 82, 358, 423, 449, 769, 796, 1034
NlaIV GGNNCC 4 cut(s) 172, 623, 954, 1101
NmeAIII GCCGAG 1 cut(s) 875
NmuCI GTSAC 3 cut(s) 121, 130, 276
NsiI ATGCAT 1 cut(s) 352
NspI RCATGY 1 cut(s) 769
PagI TCATGA 1 cut(s) 1030
PciI ACATGT 1 cut(s) 765
PctI GAATGC 2 cut(s) 350, 1285
PfeI GAWTC 2 cut(s) 391, 935
PinAI ACCGGT 2 cut(s) 325, 658
PkrI GCNGC 2 cut(s) 568, 848
PleI GAGTC 2 cut(s) 122, 490
PmeI GTTTAAAC 1 cut(s) 772
PpsI GAGTC 2 cut(s) 122, 490
PpuMI RGGWCCY 2 cut(s) 622, 952
PscI ACATGT 1 cut(s) 765
PshAI GACNNNNGTC 1 cut(s) 128
Psp124BI GAGCTC 2 cut(s) 34, 1186
Psp5II RGGWCCY 2 cut(s) 622, 952
Psp6I CCWGG 2 cut(s) 173, 1001
PspEI GGTNACC 2 cut(s) 130, 321
PspGI CCWGG 2 cut(s) 173, 1001
PspN4I GGNNCC 4 cut(s) 172, 623, 954, 1101
PspPI GGNCC 5 cut(s) 171, 622, 701, 952, 1125
PspPPI RGGWCCY 2 cut(s) 622, 952
RsaI GTAC 1 cut(s) 1151
RsaNI GTAC 1 cut(s) 1150
RseI CAYNNNNRTG 1 cut(s) 418
SacI GAGCTC 2 cut(s) 34, 1186
SaqAI TTAA 2 cut(s) 516, 771
SatI GCNGC 2 cut(s) 567, 847
Sau3AI GATC 5 cut(s) 103, 195, 589, 1176, 1372
Sau96I GGNCC 5 cut(s) 171, 622, 701, 952, 1125
SchI GAGTC 2 cut(s) 123, 491
ScrFI CCNGG 4 cut(s) 175, 501, 563, 1003
SduI GDGCHC 3 cut(s) 34, 229, 1186
SfaNI GCATC 2 cut(s) 337, 775
SfcI CTRYAG 2 cut(s) 25, 1284
SinI GGWCC 5 cut(s) 171, 622, 701, 952, 1125
SmiMI CAYNNNNRTG 1 cut(s) 418
SmlI CTYRAG 4 cut(s) 262, 299, 515, 1185
SmoI CTYRAG 4 cut(s) 262, 299, 515, 1185
Sse9I AATT 7 cut(s) 86, 383, 575, 858, 914, 1170, 1298
SsiI CCGC 1 cut(s) 567
SspI AATATT 1 cut(s) 1245
SspMI CTAG 1 cut(s) 1305
SstI GAGCTC 2 cut(s) 34, 1186
StyD4I CCNGG 4 cut(s) 173, 499, 561, 1001
StyI CCWWGG 2 cut(s) 61, 359
TaaI ACNGT 2 cut(s) 38, 417
TaqI TCGA 1 cut(s) 1120
TaqII GACCGA 1 cut(s) 1142
TasI AATT 7 cut(s) 86, 383, 575, 858, 914, 1170, 1298
TatI WGTACW 1 cut(s) 1149
TauI GCSGC 1 cut(s) 569
TfiI GAWTC 2 cut(s) 391, 935
Tru1I TTAA 2 cut(s) 516, 771
Tru9I TTAA 2 cut(s) 516, 771
TscAI CASTG 3 cut(s) 41, 132, 192
TseFI GTSAC 3 cut(s) 121, 130, 276
TseI GCWGC 1 cut(s) 846
Tsp45I GTSAC 3 cut(s) 121, 130, 276
TspRI CASTG 3 cut(s) 41, 132, 192
Vha464I CTTAAG 1 cut(s) 515
VpaK11BI GGWCC 5 cut(s) 171, 622, 701, 952, 1125
XagI CCTNNNNNAGG 1 cut(s) 60
XapI RAATTY 2 cut(s) 383, 914
XceI RCATGY 1 cut(s) 769
XcmI CCANNNNNNNNNTGG 2 cut(s) 452, 1153
XspI CTAG 1 cut(s) 1305
Zsp2I ATGCAT 1 cut(s) 352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.