MD10G1111100.v1.1

UDP-glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000284
Physical Location & Seq
Forward (+)
18262613 .. 18268386
5774 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1111100.v1.1.491

Sequence Viewer

Length: 555 bp
ATGGAGAAAGGACAGCTGAAAGCCTACAAGGCTCACTGCTTGATCTTACCCTATCCGAGCCAAGGCCATATTAATCCAATGCTCCAATTTGCCAAGCTTCTAGATCACAAAGGAGTGAGAGTCACACTCGTGATGACTCGCTTTCTCTACAAGACAATGCACAGCTCAGGATCGAGCTGCGCAGCTTGGGAGACCATCTCCGATGGCTTTGATGATACTGGGAAAGGGGACACAAACATAGACATCTATTTGGAGAGGTTCTGGCAAGTAGGGTCAAAAACTTTGGTCGAGCTTCTTGAGAAGCATTCGAATTCAGGGTCCCCCGTGGATTGTCTTTCTCCTGCTGATGGTCAGTCTCAAATTTCACTTCCCTGGTTGCCAACGCTTGATCCTTTGGACTTTCCATCTTTTGTTTACGATTGTGGATCTAACCCGACTTTCTACAAAATGCTTGTGGGTCAGTTCTCGAATGTCGACAGAGCTAATTGGGTCATGTGCAACACATTTTATGAGTTGGAAGAACAAGTGGTAGATTGGATGGCTAAGCTTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

185

Amino Acids

20.79

Weight (kDa)

5.27

Isoelectric Point (pI)

43.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 181
AccI GTMKAC 1 cut(s) 474
AclWI GGATC 3 cut(s) 178, 383, 433
AcsI RAATTY 2 cut(s) 310, 360
AfiI CCNNNNNNNGG 2 cut(s) 62, 347
AjnI CCWGG 1 cut(s) 371
AleI CACNNNNGTG 1 cut(s) 128
AluBI AGCT 8 cut(s) 16, 97, 165, 177, 185, 292, 482, 547
AluI AGCT 8 cut(s) 16, 97, 165, 177, 185, 292, 482, 547
Alw26I GTCTC 2 cut(s) 185, 360
AlwI GGATC 3 cut(s) 178, 383, 433
AoxI GGCC 1 cut(s) 64
ApeKI GCWGC 2 cut(s) 177, 182
ApoI RAATTY 2 cut(s) 310, 360
ArsI GACNNNNNNTTYG 2 cut(s) 302, 334
AseI ATTAAT 1 cut(s) 72
AspLEI GCGC 1 cut(s) 182
AspS9I GGNCC 1 cut(s) 318
AsuII TTCGAA 1 cut(s) 308
AvaII GGWCC 1 cut(s) 318
BauI CACGAG 1 cut(s) 128
BbvI GCAGC 2 cut(s) 164, 194
BccI CCATC 5 cut(s) 197, 203, 341, 412, 532
BciT130I CCWGG 1 cut(s) 373
BcoDI GTCTC 2 cut(s) 185, 360
BfaI CTAG 1 cut(s) 101
BglI GCCNNNNNGGC 1 cut(s) 29
BisI GCNGC 2 cut(s) 178, 183
BlpI GCTNAGC 1 cut(s) 543
BlsI GCNGC 2 cut(s) 179, 184
Bme1390I CCNGG 1 cut(s) 373
Bme18I GGWCC 1 cut(s) 318
BmgT120I GGNCC 1 cut(s) 318
BmiI GGNNCC 2 cut(s) 319, 320
BmrFI CCNGG 1 cut(s) 373
BmrI ACTGGG 1 cut(s) 228
BmuI ACTGGG 1 cut(s) 228
BplI GAGNNNNNCTC 4 cut(s) 111, 143, 182, 214
Bpu10I CCTNAGC 1 cut(s) 166
Bpu1102I GCTNAGC 1 cut(s) 543
Bpu14I TTCGAA 1 cut(s) 308
BpuEI CTTGAG 1 cut(s) 317
BsaI GGTCTC 1 cut(s) 185
BsaJI CCNNGG 3 cut(s) 61, 324, 371
BsaXI ACNNNNNCTCC 2 cut(s) 105, 135
Bsc4I CCNNNNNNNGG 2 cut(s) 62, 347
Bse1I ACTGG 1 cut(s) 223
BseBI CCWGG 1 cut(s) 373
BseDI CCNNGG 3 cut(s) 61, 324, 371
BseGI GGATG 1 cut(s) 543
BseLI CCNNNNNNNGG 2 cut(s) 62, 347
BseMII CTCAG 1 cut(s) 180
BseNI ACTGG 1 cut(s) 223
BseXI GCAGC 2 cut(s) 164, 194
BshFI GGCC 1 cut(s) 66
BslFI GGGAC 2 cut(s) 242, 304
BslI CCNNNNNNNGG 2 cut(s) 62, 347
BsmAI GTCTC 2 cut(s) 185, 360
BsmFI GGGAC 2 cut(s) 242, 304
BsmI GAATGC 1 cut(s) 304
BsnI GGCC 1 cut(s) 66
Bso31I GGTCTC 1 cut(s) 185
Bsp119I TTCGAA 1 cut(s) 308
Bsp143I GATC 5 cut(s) 42, 103, 170, 388, 425
Bsp1720I GCTNAGC 1 cut(s) 543
BspANI GGCC 1 cut(s) 66
BspCNI CTCAG 1 cut(s) 179
BspLI GGNNCC 2 cut(s) 319, 320
BspPI GGATC 3 cut(s) 178, 383, 433
BspT104I TTCGAA 1 cut(s) 308
BspTNI GGTCTC 1 cut(s) 185
BsrI ACTGG 1 cut(s) 223
BssECI CCNNGG 3 cut(s) 61, 324, 371
BssMI GATC 5 cut(s) 42, 103, 170, 388, 425
BssSI CACGAG 1 cut(s) 128
BssT1I CCWWGG 1 cut(s) 61
Bst2BI CACGAG 1 cut(s) 128
Bst2UI CCWGG 1 cut(s) 373
BstBI TTCGAA 1 cut(s) 308
BstDEI CTNAG 2 cut(s) 166, 543
BstDSI CCRYGG 1 cut(s) 324
BstF5I GGATG 1 cut(s) 543
BstHHI GCGC 1 cut(s) 182
BstKTI GATC 5 cut(s) 45, 106, 173, 391, 428
BstMAI GTCTC 2 cut(s) 185, 360
BstMBI GATC 5 cut(s) 42, 103, 170, 388, 425
BstMWI GCNNNNNNNGC 1 cut(s) 29
BstNI CCWGG 1 cut(s) 373
BstSCI CCNGG 1 cut(s) 371
BstV1I GCAGC 2 cut(s) 164, 194
BstX2I RGATCY 1 cut(s) 425
BstYI RGATCY 1 cut(s) 425
BsuRI GGCC 1 cut(s) 66
BtgI CCRYGG 1 cut(s) 324
BtsCI GGATG 1 cut(s) 543
BtsI GCAGTG 1 cut(s) 34
BtsIMutI CAGTG 1 cut(s) 34
CfoI GCGC 1 cut(s) 182
Cfr13I GGNCC 1 cut(s) 318
CviAII CATG 1 cut(s) 493
DdeI CTNAG 2 cut(s) 166, 543
DpnI GATC 5 cut(s) 44, 105, 172, 390, 427
DpnII GATC 5 cut(s) 42, 103, 170, 388, 425
Eco130I CCWWGG 1 cut(s) 61
Eco31I GGTCTC 1 cut(s) 185
Eco47I GGWCC 1 cut(s) 318
EcoO109I RGGNCCY 1 cut(s) 318
EcoRI GAATTC 1 cut(s) 310
EcoRII CCWGG 1 cut(s) 371
EcoT14I CCWWGG 1 cut(s) 61
ErhI CCWWGG 1 cut(s) 61
FaeI CATG 1 cut(s) 496
FaiI YATR 4 cut(s) 69, 239, 494, 510
FaqI GGGAC 2 cut(s) 242, 304
FatI CATG 1 cut(s) 492
FblI GTMKAC 1 cut(s) 474
Fnu4HI GCNGC 2 cut(s) 178, 183
FokI GGATG 1 cut(s) 550
Fsp4HI GCNGC 2 cut(s) 178, 183
FspBI CTAG 1 cut(s) 101
FspI TGCGCA 1 cut(s) 181
GlaI GCGC 1 cut(s) 181
GluI GCNGC 2 cut(s) 178, 183
HaeIII GGCC 1 cut(s) 66
HhaI GCGC 1 cut(s) 182
Hin1II CATG 1 cut(s) 496
Hin6I GCGC 1 cut(s) 180
HinP1I GCGC 1 cut(s) 180
HincII GTYRAC 1 cut(s) 475
HindII GTYRAC 1 cut(s) 475
HindIII AAGCTT 2 cut(s) 95, 545
HinfI GANTC 2 cut(s) 120, 136
Hpy166II GTNNAC 2 cut(s) 415, 475
Hpy188I TCNGA 2 cut(s) 57, 202
Hpy188III TCNNGA 5 cut(s) 101, 130, 168, 296, 466
Hpy8I GTNNAC 2 cut(s) 415, 475
HpyCH4V TGCA 2 cut(s) 160, 498
HpyF10VI GCNNNNNNNGC 1 cut(s) 29
HpyF3I CTNAG 2 cut(s) 166, 543
Hsp92II CATG 1 cut(s) 496
HspAI GCGC 1 cut(s) 180
KflI GGGWCCC 1 cut(s) 318
Kzo9I GATC 5 cut(s) 42, 103, 170, 388, 425
LmnI GCTCC 1 cut(s) 87
LpnPI CCDG 7 cut(s) 153, 204, 247, 300, 354, 358, 385
Lsp1109I GCAGC 2 cut(s) 164, 194
MaeI CTAG 1 cut(s) 101
MaeIII GTNAC 1 cut(s) 121
MalI GATC 5 cut(s) 44, 105, 172, 390, 427
MboI GATC 5 cut(s) 42, 103, 170, 388, 425
MboII GAAGA 1 cut(s) 530
MflI RGATCY 1 cut(s) 425
MluCI AATT 4 cut(s) 86, 310, 360, 484
MlyI GAGTC 2 cut(s) 129, 130
MmeI TCCRAC 1 cut(s) 495
MnlI CCTC 1 cut(s) 249
MseI TTAA 1 cut(s) 72
MslI CAYNNNNRTG 1 cut(s) 128
MspA1I CMGCKG 1 cut(s) 16
MspR9I CCNGG 1 cut(s) 373
Mva1269I GAATGC 1 cut(s) 304
MvaI CCWGG 1 cut(s) 373
MwoI GCNNNNNNNGC 1 cut(s) 29
NdeII GATC 5 cut(s) 42, 103, 170, 388, 425
NlaIII CATG 1 cut(s) 496
NlaIV GGNNCC 2 cut(s) 319, 320
NmuCI GTSAC 1 cut(s) 121
NsbI TGCGCA 1 cut(s) 181
NspV TTCGAA 1 cut(s) 308
OliI CACNNNNGTG 1 cut(s) 128
PctI GAATGC 1 cut(s) 304
PkrI GCNGC 2 cut(s) 179, 184
PleI GAGTC 2 cut(s) 128, 130
PpsI GAGTC 2 cut(s) 128, 130
PpuMI RGGWCCY 1 cut(s) 318
PshBI ATTAAT 1 cut(s) 72
Psp5II RGGWCCY 1 cut(s) 318
Psp6I CCWGG 1 cut(s) 371
PspGI CCWGG 1 cut(s) 371
PspN4I GGNNCC 2 cut(s) 319, 320
PspPI GGNCC 1 cut(s) 318
PspPPI RGGWCCY 1 cut(s) 318
PsuI RGATCY 1 cut(s) 425
PvuII CAGCTG 1 cut(s) 16
RseI CAYNNNNRTG 1 cut(s) 128
SalI GTCGAC 1 cut(s) 473
SaqAI TTAA 1 cut(s) 72
SatI GCNGC 2 cut(s) 178, 183
Sau3AI GATC 5 cut(s) 42, 103, 170, 388, 425
Sau96I GGNCC 1 cut(s) 318
SchI GAGTC 2 cut(s) 129, 130
ScrFI CCNGG 1 cut(s) 373
SetI ASST 9 cut(s) 18, 99, 167, 179, 187, 260, 294, 484, 549
SfuI TTCGAA 1 cut(s) 308
SinI GGWCC 1 cut(s) 318
SmiMI CAYNNNNRTG 1 cut(s) 128
SmlI CTYRAG 1 cut(s) 296
SmoI CTYRAG 1 cut(s) 296
Sse9I AATT 4 cut(s) 86, 310, 360, 484
SspMI CTAG 1 cut(s) 101
StyD4I CCNGG 1 cut(s) 371
StyI CCWWGG 1 cut(s) 61
TaqI TCGA 5 cut(s) 173, 288, 308, 467, 474
TasI AATT 4 cut(s) 86, 310, 360, 484
Tru1I TTAA 1 cut(s) 72
Tru9I TTAA 1 cut(s) 72
TscAI CASTG 1 cut(s) 41
TseFI GTSAC 1 cut(s) 121
TseI GCWGC 2 cut(s) 177, 182
Tsp45I GTSAC 1 cut(s) 121
TspRI CASTG 1 cut(s) 41
VpaK11BI GGWCC 1 cut(s) 318
VspI ATTAAT 1 cut(s) 72
XapI RAATTY 2 cut(s) 310, 360
XbaI TCTAGA 1 cut(s) 100
XmiI GTMKAC 1 cut(s) 474
XspI CTAG 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.