Rorug05G0531000

UDP-glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000284
Physical Location & Seq
Reverse (-)
71938361 .. 71942000
3640 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0531000.1

Sequence Viewer

Length: 1518 bp
ATGGATCTCCTCCTCTTGGAGAAGACCCTAATGGGTCTCTTCCTCGCCGTCGTGGTCGCCATCGTTGTGTCCAAGCTCCGAGGCAAGAAGTTTAAGCTGCCTCCGGGTCCGATGCCGGTCCCGGTGTTCGGCAACTGGCTCCAGGTCGGCGATGACCTCAACCACCGCAATCTGACAGACATGGCCAAGAGATTCGGCGAAGTGTTCATGCTCCGCATGGGGCAGCGCAACCTCGTCGTCGTGTCGTCGCCGGACCTGGCCAAGGAGGTCCTCCACACGCAGGGGGTCGAGTTCGGCTCGCGAACACGAAACGTCGTGTTCGATATCTTCACCGGCAAAGGACAGGACATGGTGTTCACCGTTTACGGCGAGCACTGGCGGAAAATGAGACGCATAATGACCGTTCCGTTTTTCACCAACAAGGTGGTGCAGCAGTACCGCCACGGCTGGGAGGCGGAGGCGGCTGCGGTGGTGGAGGACGTCAAGAACAAGCACCCCGAGGCCGCCACGAGTGGGATGGTGCTACGTAGGAGGCTACAGCTGATGATGTACAACAACATGTACAGGATCATGTTCGACAGGAGATTTGAAAGCGAGGAGGATCCCCTGTTTGTGAAATTGAAGGGTTTGAATGGAGAGAGGAGCCGGTTGGCGCAGAGCTTCGAGTATAATTACGGCGATTTCATTCCGGTGCTCCGGCCATTCCTCAGGGGGTACTTGAAGATCTGTAAGGAGGTGAAGGAGAAGAGGATTAAGCTCTTCAAGGACTATTTCGTCGACGAGAGAAAGAAACTTGCAAGCACACAAGCCACAACTAATGAAGGGTTGAAGTGTGCCATTGACCACATCTTGGACGCTCAGCAGAAAGGAGAGATCAACGAGGACAATGTCCTTTACATCGTCGAGAACATTAACGTTGCCGCCATTGAGACTACACTATGGTCAATCGAGTGGGGAATCGCCGAGCTTGTGAACCACCCCGAAATCCAGAACAAGCTGAGGGATGAGCTCGACACCGTCCTCGGCCGTGGTGTTCAAGTCACAGAACCAGAAATTCATAAGCTGCCGTACCTTCAAGCAGTGGTCAAGGAAACCCTAAGGCTTCGCATGGCAATCCCCCTCCTCGTCCCACACATGAATCTCCATGATGCTAAGCTCGGAGGCTTTGACATTCCGGCGGAGAGCAAGATCTTGGTGAATGCTTGGTGGCTAGCAAACAACCCTGCACACTGGAAGAAGCCAGAGGAGTTTAGGCCCGAGAGGTTTTTGGAAGAGGAGTCCAAAGTTGAGGCAAATGGCAATGACTTCAGGTACCTTCCGTTTGGTGTCGGCAGGAGGAGTTGTCCCGGCATTATTTTGGCACTGCCGATCCTTGGGATTACTTTAGGACGTTTGGTCCAGAACTTTGAGCTCTTGCCTCCTCCAGGACAGACTCAGCTTGACACAACAGAGAAAGGAGGACAGTTTAGTCTGCACATCTTGAAACATTCCACCATAGTTATGAAGCCAAGGACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko00380 ko00966 ko01110 ko01210 map00380 map00966 map01110 map01210
Pfam Domains
Protein Families
UDPGT

Protein Analysis

505

Amino Acids

57.95

Weight (kDa)

9.11

Isoelectric Point (pI)

44.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 34 - 497 5.7e-119 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 773, 1467
AatII GACGTC 1 cut(s) 483
Acc65I GGTACC 1 cut(s) 1311
AccB1I GGYRCC 1 cut(s) 1311
AccB7I CCANNNNNTGG 1 cut(s) 850
AccI GTMKAC 1 cut(s) 777
AccII CGCG 1 cut(s) 301
AclI AACGTT 1 cut(s) 915
AclWI GGATC 5 cut(s) 12, 575, 596, 609, 1363
AcoI YGGCCR 4 cut(s) 183, 258, 698, 1024
AcsI RAATTY 1 cut(s) 1053
AcuI CTGAAG 1 cut(s) 1291
AcyI GRCGYC 1 cut(s) 480
AfaI GTAC 6 cut(s) 437, 551, 563, 716, 1070, 1313
AfiI CCNNNNNNNGG 9 cut(s) 16, 128, 262, 280, 448, 513, 850, 1373, 1424
AflIII ACRYGT 1 cut(s) 558
AgsI TTSAA 9 cut(s) 590, 622, 631, 721, 763, 829, 1037, 1076, 1483
AhdI GACNNNNNGTC 1 cut(s) 1394
AjnI CCWGG 3 cut(s) 141, 255, 1423
AloI GAACNNNNNNTCC 2 cut(s) 338, 370
Alw21I GWGCWC 4 cut(s) 375, 696, 1011, 1413
Alw26I GTCTC 3 cut(s) 41, 382, 923
AlwI GGATC 5 cut(s) 12, 575, 596, 609, 1363
Ama87I CYCGRG 2 cut(s) 497, 1256
AoxI GGCC 6 cut(s) 183, 258, 501, 698, 1024, 1253
ApeKI GCWGC 5 cut(s) 97, 223, 430, 464, 1063
ApoI RAATTY 1 cut(s) 1053
ArsI GACNNNNNNTTYG 2 cut(s) 569, 601
Asp718I GGTACC 1 cut(s) 1311
AspLEI GCGC 2 cut(s) 228, 655
AspS9I GGNCC 6 cut(s) 107, 118, 253, 268, 1254, 1396
AsuC2I CCSGG 3 cut(s) 105, 122, 1347
AsuHPI GGTGA 5 cut(s) 322, 349, 406, 748, 1207
AsuNHI GCTAGC 1 cut(s) 1210
AvaI CYCGRG 2 cut(s) 497, 1256
AvaII GGWCC 5 cut(s) 107, 118, 253, 268, 1396
AxyI CCTNAGG 2 cut(s) 707, 1097
BalI TGGCCA 2 cut(s) 185, 260
BamHI GGATCC 1 cut(s) 601
BanI GGYRCC 1 cut(s) 1311
BanII GRGCYC 2 cut(s) 1011, 1413
BauI CACGAG 1 cut(s) 508
BbsI GAAGAC 1 cut(s) 29
Bbv12I GWGCWC 4 cut(s) 375, 696, 1011, 1413
BbvCI CCTCAGC 1 cut(s) 998
BbvI GCAGC 5 cut(s) 84, 235, 442, 451, 1050
BccI CCATC 2 cut(s) 68, 511
BceAI ACGGC 6 cut(s) 32, 382, 460, 691, 1011, 1051
BcgI CGANNNNNNTGC 2 cut(s) 217, 251
BciT130I CCWGG 3 cut(s) 143, 257, 1425
BcnI CCSGG 3 cut(s) 105, 122, 1347
BcoDI GTCTC 3 cut(s) 41, 382, 923
BfaI CTAG 1 cut(s) 1211
BfmI CTRYAG 1 cut(s) 536
BglII AGATCT 2 cut(s) 723, 1188
BisI GCNGC 8 cut(s) 98, 224, 431, 462, 465, 504, 921, 1064
BlpI GCTNAGC 2 cut(s) 858, 1152
BlsI GCNGC 8 cut(s) 99, 225, 432, 463, 466, 505, 922, 1065
Bme1390I CCNGG 6 cut(s) 105, 122, 143, 257, 1347, 1425
Bme18I GGWCC 5 cut(s) 107, 118, 253, 268, 1396
BmeRI GACNNNNNGTC 1 cut(s) 1394
BmeT110I CYCGRG 2 cut(s) 497, 1256
BmgT120I GGNCC 6 cut(s) 107, 118, 253, 268, 1254, 1396
BmiI GGNNCC 6 cut(s) 108, 120, 140, 603, 644, 1313
BmrFI CCNGG 6 cut(s) 105, 122, 143, 257, 1347, 1425
BmsI GCATC 2 cut(s) 102, 1138
BmtI GCTAGC 1 cut(s) 1214
BpiI GAAGAC 1 cut(s) 29
BplI GAGNNNNNCTC 2 cut(s) 281, 313
BpmI CTGGAG 2 cut(s) 125, 1407
Bpu10I CCTNAGC 1 cut(s) 998
Bpu1102I GCTNAGC 2 cut(s) 858, 1152
BpuMI CCSGG 3 cut(s) 105, 122, 1347
BsaAI YACGTR 1 cut(s) 527
BsaHI GRCGYC 1 cut(s) 480
BsaI GGTCTC 1 cut(s) 41
BsaJI CCNNGG 8 cut(s) 79, 261, 442, 498, 1021, 1027, 1372, 1508
BsaWI WCCGGW 1 cut(s) 688
BsaXI ACNNNNNCTCC 2 cut(s) 1327, 1357
Bsc4I CCNNNNNNNGG 9 cut(s) 16, 128, 262, 280, 448, 513, 850, 1373, 1424
Bse118I RCCGGY 3 cut(s) 115, 332, 645
Bse1I ACTGG 3 cut(s) 140, 380, 1235
Bse21I CCTNAGG 2 cut(s) 707, 1097
Bse3DI GCAATG 1 cut(s) 1306
BseBI CCWGG 3 cut(s) 143, 257, 1425
BseDI CCNNGG 8 cut(s) 79, 261, 442, 498, 1021, 1027, 1372, 1508
BseGI GGATG 2 cut(s) 522, 1009
BseLI CCNNNNNNNGG 9 cut(s) 16, 128, 262, 280, 448, 513, 850, 1373, 1424
BseMI GCAATG 1 cut(s) 1306
BseMII CTCAG 4 cut(s) 721, 872, 989, 1448
BseNI ACTGG 3 cut(s) 140, 380, 1235
BseRI GAGGAG 7 cut(s) 611, 655, 1112, 1259, 1289, 1351, 1410
BseX3I CGGCCG 1 cut(s) 1024
BseXI GCAGC 5 cut(s) 84, 235, 442, 451, 1050
BseYI CCCAGC 1 cut(s) 447
BsgI GTGCAG 3 cut(s) 449, 1209, 1457
Bsh1236I CGCG 1 cut(s) 301
Bsh1285I CGRYCG 1 cut(s) 1027
BshFI GGCC 6 cut(s) 185, 260, 503, 700, 1026, 1255
BshNI GGYRCC 1 cut(s) 1311
BsiEI CGRYCG 1 cut(s) 1027
BsiHKAI GWGCWC 4 cut(s) 375, 696, 1011, 1413
BsiHKCI CYCGRG 2 cut(s) 497, 1256
BslFI GGGAC 3 cut(s) 104, 1112, 1329
BslI CCNNNNNNNGG 9 cut(s) 16, 128, 262, 280, 448, 513, 850, 1373, 1424
BsmAI GTCTC 3 cut(s) 41, 382, 923
BsmBI CGTCTC 1 cut(s) 382
BsmFI GGGAC 3 cut(s) 104, 1112, 1329
BsmI GAATGC 1 cut(s) 1204
BsnI GGCC 6 cut(s) 185, 260, 503, 700, 1026, 1255
Bso31I GGTCTC 1 cut(s) 41
BsoBI CYCGRG 2 cut(s) 497, 1256
Bsp1286I GDGCHC 4 cut(s) 375, 696, 1011, 1413
Bsp1407I TGTACA 2 cut(s) 549, 561
Bsp143I GATC 7 cut(s) 4, 567, 601, 723, 873, 1188, 1368
Bsp1720I GCTNAGC 2 cut(s) 858, 1152
Bsp68I TCGCGA 1 cut(s) 301
BspANI GGCC 6 cut(s) 185, 260, 503, 700, 1026, 1255
BspCNI CTCAG 4 cut(s) 720, 871, 990, 1447
BspFNI CGCG 1 cut(s) 301
BspLI GGNNCC 6 cut(s) 108, 120, 140, 603, 644, 1313
BspOI GCTAGC 1 cut(s) 1214
BspPI GGATC 5 cut(s) 12, 575, 596, 609, 1363
BspQI GCTCTTC 1 cut(s) 764
BspT107I GGYRCC 1 cut(s) 1311
BspTNI GGTCTC 1 cut(s) 41
BsrDI GCAATG 1 cut(s) 1306
BsrFI RCCGGY 3 cut(s) 115, 332, 645
BsrGI TGTACA 2 cut(s) 549, 561
BsrI ACTGG 3 cut(s) 140, 380, 1235
BssAI RCCGGY 3 cut(s) 115, 332, 645
BssECI CCNNGG 8 cut(s) 79, 261, 442, 498, 1021, 1027, 1372, 1508
BssMI GATC 7 cut(s) 4, 567, 601, 723, 873, 1188, 1368
BssNI GRCGYC 1 cut(s) 480
BssSI CACGAG 1 cut(s) 508
BssT1I CCWWGG 3 cut(s) 261, 1372, 1508
Bst2BI CACGAG 1 cut(s) 508
Bst2UI CCWGG 3 cut(s) 143, 257, 1425
Bst4CI ACNGT 4 cut(s) 361, 403, 1018, 1464
Bst6I CTCTTC 4 cut(s) 44, 740, 764, 1266
BstACI GRCGYC 1 cut(s) 480
BstAUI TGTACA 2 cut(s) 549, 561
BstBAI YACGTR 1 cut(s) 527
BstC8I GCNNGC 4 cut(s) 299, 371, 799, 1212
BstDEI CTNAG 6 cut(s) 707, 858, 998, 1097, 1152, 1434
BstDSI CCRYGG 2 cut(s) 442, 1027
BstENI CCTNNNNNAGG 2 cut(s) 260, 1422
BstF5I GGATG 2 cut(s) 522, 1009
BstFNI CGCG 1 cut(s) 301
BstHHI GCGC 2 cut(s) 228, 655
BstKTI GATC 7 cut(s) 7, 570, 604, 726, 876, 1191, 1371
BstMAI GTCTC 3 cut(s) 41, 382, 923
BstMBI GATC 7 cut(s) 4, 567, 601, 723, 873, 1188, 1368
BstMCI CGRYCG 1 cut(s) 1027
BstMWI GCNNNNNNNGC 1 cut(s) 461
BstNI CCWGG 3 cut(s) 143, 257, 1425
BstNSI RCATGY 1 cut(s) 562
BstSCI CCNGG 6 cut(s) 103, 120, 141, 255, 1345, 1423
BstSFI CTRYAG 1 cut(s) 536
BstSNI TACGTA 1 cut(s) 527
BstUI CGCG 1 cut(s) 301
BstV1I GCAGC 5 cut(s) 84, 235, 442, 451, 1050
BstV2I GAAGAC 1 cut(s) 29
BstX2I RGATCY 4 cut(s) 4, 601, 723, 1188
BstXI CCANNNNNNTGG 1 cut(s) 424
BstYI RGATCY 4 cut(s) 4, 601, 723, 1188
BstZI CGGCCG 1 cut(s) 1024
Bsu36I CCTNAGG 2 cut(s) 707, 1097
BsuRI GGCC 6 cut(s) 185, 260, 503, 700, 1026, 1255
BtgI CCRYGG 2 cut(s) 442, 1027
BtgZI GCGATG 1 cut(s) 165
BtsCI GGATG 2 cut(s) 522, 1009
BtsI GCAGTG 2 cut(s) 1086, 1361
BtsIMutI CAGTG 4 cut(s) 373, 1086, 1228, 1361
BtuMI TCGCGA 1 cut(s) 301
Cac8I GCNNGC 4 cut(s) 299, 371, 799, 1212
CfoI GCGC 2 cut(s) 228, 655
Cfr10I RCCGGY 3 cut(s) 115, 332, 645
Cfr13I GGNCC 6 cut(s) 107, 118, 253, 268, 1254, 1396
CseI GACGC 2 cut(s) 399, 863
Csp6I GTAC 6 cut(s) 436, 550, 562, 715, 1069, 1312
CviAII CATG 9 cut(s) 181, 208, 217, 349, 559, 571, 1108, 1135, 1145
CviQI GTAC 6 cut(s) 436, 550, 562, 715, 1069, 1312
DdeI CTNAG 6 cut(s) 707, 858, 998, 1097, 1152, 1434
DpnI GATC 7 cut(s) 6, 569, 603, 725, 875, 1190, 1370
DpnII GATC 7 cut(s) 4, 567, 601, 723, 873, 1188, 1368
DrdI GACNNNNNNGTC 2 cut(s) 773, 1467
DriI GACNNNNNGTC 1 cut(s) 1394
DseDI GACNNNNNNGTC 2 cut(s) 773, 1467
EaeI YGGCCR 4 cut(s) 183, 258, 698, 1024
EagI CGGCCG 1 cut(s) 1024
Eam1104I CTCTTC 4 cut(s) 44, 740, 764, 1266
Eam1105I GACNNNNNGTC 1 cut(s) 1394
EarI CTCTTC 4 cut(s) 44, 740, 764, 1266
EciI GGCGGA 3 cut(s) 394, 470, 1193
Ecl136II GAGCTC 2 cut(s) 1009, 1411
EclXI CGGCCG 1 cut(s) 1024
Eco105I TACGTA 1 cut(s) 527
Eco130I CCWWGG 3 cut(s) 261, 1372, 1508
Eco24I GRGCYC 2 cut(s) 1011, 1413
Eco31I GGTCTC 1 cut(s) 41
Eco32I GATATC 1 cut(s) 325
Eco47I GGWCC 5 cut(s) 107, 118, 253, 268, 1396
Eco52I CGGCCG 1 cut(s) 1024
Eco53kI GAGCTC 2 cut(s) 1009, 1411
Eco57I CTGAAG 1 cut(s) 1291
Eco81I CCTNAGG 2 cut(s) 707, 1097
Eco88I CYCGRG 2 cut(s) 497, 1256
EcoICRI GAGCTC 2 cut(s) 1009, 1411
EcoNI CCTNNNNNAGG 2 cut(s) 260, 1422
EcoO109I RGGNCCY 1 cut(s) 268
EcoRII CCWGG 3 cut(s) 141, 255, 1423
EcoRV GATATC 1 cut(s) 325
EcoT14I CCWWGG 3 cut(s) 261, 1372, 1508
EcoT38I GRGCYC 2 cut(s) 1011, 1413
ErhI CCWWGG 3 cut(s) 261, 1372, 1508
Esp3I CGTCTC 1 cut(s) 382
FaeI CATG 9 cut(s) 184, 211, 220, 352, 562, 574, 1111, 1138, 1148
FaqI GGGAC 3 cut(s) 104, 1112, 1329
FatI CATG 9 cut(s) 180, 207, 216, 348, 558, 570, 1107, 1134, 1144
FblI GTMKAC 1 cut(s) 777
Fnu4HI GCNGC 8 cut(s) 98, 224, 431, 462, 465, 504, 921, 1064
FokI GGATG 2 cut(s) 529, 1016
FriOI GRGCYC 2 cut(s) 1011, 1413
Fsp4HI GCNGC 8 cut(s) 98, 224, 431, 462, 465, 504, 921, 1064
FspBI CTAG 1 cut(s) 1211
GlaI GCGC 2 cut(s) 227, 654
GluI GCNGC 8 cut(s) 98, 224, 431, 462, 465, 504, 921, 1064
GsaI CCCAGC 1 cut(s) 451
GsuI CTGGAG 2 cut(s) 125, 1407
HaeIII GGCC 6 cut(s) 185, 260, 503, 700, 1026, 1255
HgaI GACGC 2 cut(s) 399, 863
HhaI GCGC 2 cut(s) 228, 655
Hin1I GRCGYC 1 cut(s) 480
Hin1II CATG 9 cut(s) 184, 211, 220, 352, 562, 574, 1111, 1138, 1148
Hin6I GCGC 2 cut(s) 226, 653
HinP1I GCGC 2 cut(s) 226, 653
HincII GTYRAC 1 cut(s) 778
HindII GTYRAC 1 cut(s) 778
HinfI GANTC 5 cut(s) 192, 957, 1138, 1277, 1432
HphI GGTGA 5 cut(s) 322, 349, 406, 748, 1207
Hpy166II GTNNAC 4 cut(s) 357, 364, 778, 973
Hpy188I TCNGA 4 cut(s) 80, 111, 174, 1160
Hpy188III TCNNGA 6 cut(s) 300, 484, 904, 988, 1399, 1480
Hpy8I GTNNAC 4 cut(s) 357, 364, 778, 973
Hpy99I CGWCG 8 cut(s) 53, 239, 242, 250, 317, 779, 782, 905
HpyAV CCTTC 5 cut(s) 616, 733, 815, 1082, 1325
HpyCH4III ACNGT 4 cut(s) 361, 403, 1018, 1464
HpyCH4IV ACGT 5 cut(s) 312, 480, 526, 915, 1390
HpyCH4V TGCA 4 cut(s) 430, 797, 1226, 1474
HpyF10VI GCNNNNNNNGC 1 cut(s) 461
HpyF3I CTNAG 6 cut(s) 707, 858, 998, 1097, 1152, 1434
HpySE526I ACGT 5 cut(s) 312, 480, 526, 915, 1390
Hsp92I GRCGYC 1 cut(s) 480
Hsp92II CATG 9 cut(s) 184, 211, 220, 352, 562, 574, 1111, 1138, 1148
HspAI GCGC 2 cut(s) 226, 653
KpnI GGTACC 1 cut(s) 1315
Kzo9I GATC 7 cut(s) 4, 567, 601, 723, 873, 1188, 1368
LguI GCTCTTC 1 cut(s) 764
LmnI GCTCC 5 cut(s) 81, 144, 216, 642, 699
Lsp1109I GCAGC 5 cut(s) 84, 235, 442, 451, 1050
LweI GCATC 2 cut(s) 102, 1138
MaeI CTAG 1 cut(s) 1211
MaeII ACGT 5 cut(s) 312, 480, 526, 915, 1390
MaeIII GTNAC 1 cut(s) 1039
MalI GATC 7 cut(s) 6, 569, 603, 725, 875, 1190, 1370
MboI GATC 7 cut(s) 4, 567, 601, 723, 873, 1188, 1368
MboII GAAGA 8 cut(s) 31, 34, 319, 733, 751, 757, 1246, 1283
MflI RGATCY 4 cut(s) 4, 601, 723, 1188
MhlI GDGCHC 4 cut(s) 375, 696, 1011, 1413
MlsI TGGCCA 2 cut(s) 185, 260
MluCI AATT 3 cut(s) 617, 670, 1053
MluNI TGGCCA 2 cut(s) 185, 260
MlyI GAGTC 2 cut(s) 1286, 1426
Mox20I TGGCCA 2 cut(s) 185, 260
MscI TGGCCA 2 cut(s) 185, 260
MseI TTAA 3 cut(s) 93, 753, 912
MslI CAYNNNNRTG 3 cut(s) 65, 689, 1499
Msp20I TGGCCA 2 cut(s) 185, 260
MspA1I CMGCKG 1 cut(s) 541
MspR9I CCNGG 6 cut(s) 105, 122, 143, 257, 1347, 1425
Mva1269I GAATGC 1 cut(s) 1204
MvaI CCWGG 3 cut(s) 143, 257, 1425
MvnI CGCG 1 cut(s) 301
MwoI GCNNNNNNNGC 1 cut(s) 461
NciI CCSGG 3 cut(s) 105, 122, 1347
NdeII GATC 7 cut(s) 4, 567, 601, 723, 873, 1188, 1368
NheI GCTAGC 1 cut(s) 1210
NlaIII CATG 9 cut(s) 184, 211, 220, 352, 562, 574, 1111, 1138, 1148
NlaIV GGNNCC 6 cut(s) 108, 120, 140, 603, 644, 1313
NmeAIII GCCGAG 2 cut(s) 988, 1002
NmuCI GTSAC 1 cut(s) 1039
NruI TCGCGA 1 cut(s) 301
NspI RCATGY 1 cut(s) 562
PciI ACATGT 1 cut(s) 558
PciSI GCTCTTC 1 cut(s) 764
PcsI WCGNNNNNNNCGW 1 cut(s) 318
PctI GAATGC 1 cut(s) 1204
PfeI GAWTC 3 cut(s) 192, 957, 1138
PflFI GACNNNGTC 2 cut(s) 887, 1016
PflMI CCANNNNNTGG 1 cut(s) 850
PfoI TCCNGGA 1 cut(s) 1423
PkrI GCNGC 8 cut(s) 99, 225, 432, 463, 466, 505, 922, 1065
PleI GAGTC 2 cut(s) 1285, 1426
PpsI GAGTC 2 cut(s) 1285, 1426
Ppu21I YACGTR 1 cut(s) 527
PpuMI RGGWCCY 1 cut(s) 268
PscI ACATGT 1 cut(s) 558
Psp124BI GAGCTC 2 cut(s) 1011, 1413
Psp1406I AACGTT 1 cut(s) 915
Psp5II RGGWCCY 1 cut(s) 268
Psp6I CCWGG 3 cut(s) 141, 255, 1423
PspFI CCCAGC 1 cut(s) 447
PspGI CCWGG 3 cut(s) 141, 255, 1423
PspN4I GGNNCC 6 cut(s) 108, 120, 140, 603, 644, 1313
PspPI GGNCC 6 cut(s) 107, 118, 253, 268, 1254, 1396
PspPPI RGGWCCY 1 cut(s) 268
PsuI RGATCY 4 cut(s) 4, 601, 723, 1188
PsyI GACNNNGTC 2 cut(s) 887, 1016
PvuII CAGCTG 1 cut(s) 541
RruI TCGCGA 1 cut(s) 301
RsaI GTAC 6 cut(s) 437, 551, 563, 716, 1070, 1313
RsaNI GTAC 6 cut(s) 436, 550, 562, 715, 1069, 1312
RseI CAYNNNNRTG 3 cut(s) 65, 689, 1499
SacI GAGCTC 2 cut(s) 1011, 1413
SalI GTCGAC 1 cut(s) 776
SapI GCTCTTC 1 cut(s) 764
SaqAI TTAA 3 cut(s) 93, 753, 912
SatI GCNGC 8 cut(s) 98, 224, 431, 462, 465, 504, 921, 1064
Sau3AI GATC 7 cut(s) 4, 567, 601, 723, 873, 1188, 1368
Sau96I GGNCC 6 cut(s) 107, 118, 253, 268, 1254, 1396
SchI GAGTC 2 cut(s) 1286, 1426
ScrFI CCNGG 6 cut(s) 105, 122, 143, 257, 1347, 1425
SduI GDGCHC 4 cut(s) 375, 696, 1011, 1413
SfaNI GCATC 2 cut(s) 102, 1138
SfcI CTRYAG 1 cut(s) 536
SgrDI CGTCGACG 1 cut(s) 776
SinI GGWCC 5 cut(s) 107, 118, 253, 268, 1396
SmiMI CAYNNNNRTG 3 cut(s) 65, 689, 1499
SnaBI TACGTA 1 cut(s) 527
Sse9I AATT 3 cut(s) 617, 670, 1053
SspMI CTAG 1 cut(s) 1211
SstI GAGCTC 2 cut(s) 1011, 1413
StyD4I CCNGG 6 cut(s) 103, 120, 141, 255, 1345, 1423
StyI CCWWGG 3 cut(s) 261, 1372, 1508
TaaI ACNGT 4 cut(s) 361, 403, 1018, 1464
TaiI ACGT 5 cut(s) 315, 483, 529, 918, 1393
TaqI TCGA 8 cut(s) 288, 321, 576, 663, 777, 903, 948, 1011
TasI AATT 3 cut(s) 617, 670, 1053
TatI WGTACW 2 cut(s) 549, 561
TauI GCSGC 3 cut(s) 464, 506, 923
TfiI GAWTC 3 cut(s) 192, 957, 1138
Tru1I TTAA 3 cut(s) 93, 753, 912
Tru9I TTAA 3 cut(s) 93, 753, 912
TscAI CASTG 4 cut(s) 380, 1086, 1235, 1368
TseFI GTSAC 1 cut(s) 1039
TseI GCWGC 5 cut(s) 97, 223, 430, 464, 1063
Tsp45I GTSAC 1 cut(s) 1039
TspDTI ATGAA 6 cut(s) 196, 673, 834, 1046, 1151, 1517
TspGWI ACGGA 2 cut(s) 396, 1308
TspRI CASTG 4 cut(s) 380, 1086, 1235, 1368
Tth111I GACNNNGTC 2 cut(s) 887, 1016
Van91I CCANNNNNTGG 1 cut(s) 850
VpaK11BI GGWCC 5 cut(s) 107, 118, 253, 268, 1396
XagI CCTNNNNNAGG 2 cut(s) 260, 1422
XapI RAATTY 1 cut(s) 1053
XceI RCATGY 1 cut(s) 562
XcmI CCANNNNNNNNNTGG 1 cut(s) 514
XmiI GTMKAC 1 cut(s) 777
XspI CTAG 1 cut(s) 1211
ZraI GACGTC 1 cut(s) 481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.