Rh6BG041200

UDP-glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
6724549 .. 6724833
285 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG041200.1

Sequence Viewer

Length: 285 bp
ATGATGGAGAGAACTCGCAAAGCTCATTGTTTAGTCCTAACCTATCCAACCCAAGGCCATATCAATCCCATGCTTCAATTTGCCAAGCTTCTCCATCACAAAGGACTCAAAGTCACATTGGTCACCACTCATTTTCTCCTCAACTCATTACAACTCCATGCCGGATCCAGTAAGTGCAACATTGCCCTCGAGACCATTTCTGATGGCTACGATGAGGGAGGGTATGCAACAGCAGAAAGCACAGACGCTTACTTGAACCGCTTTTGGGAAATAGACTTTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
Pfam Domains
Protein Families

Protein Analysis

94

Amino Acids

10.64

Weight (kDa)

6.57

Isoelectric Point (pI)

31.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 259
AclWI GGATC 2 cut(s) 159, 172
AfiI CCNNNNNNNGG 2 cut(s) 53, 265
AgsI TTSAA 2 cut(s) 77, 256
AhdI GACNNNNNGTC 1 cut(s) 110
AluBI AGCT 2 cut(s) 23, 88
AluI AGCT 2 cut(s) 23, 88
Alw26I GTCTC 1 cut(s) 185
AlwI GGATC 2 cut(s) 159, 172
Ama87I CYCGRG 1 cut(s) 188
AoxI GGCC 1 cut(s) 55
AsuHPI GGTGA 1 cut(s) 115
AvaI CYCGRG 1 cut(s) 188
BamHI GGATCC 1 cut(s) 164
BccI CCATC 2 cut(s) 102, 197
BcoDI GTCTC 1 cut(s) 185
BmeRI GACNNNNNGTC 1 cut(s) 110
BmeT110I CYCGRG 1 cut(s) 188
BmiI GGNNCC 1 cut(s) 166
BsaI GGTCTC 1 cut(s) 185
BsaJI CCNNGG 1 cut(s) 52
Bsc4I CCNNNNNNNGG 2 cut(s) 53, 265
Bse1I ACTGG 1 cut(s) 168
Bse3DI GCAATG 1 cut(s) 180
BseDI CCNNGG 1 cut(s) 52
BseLI CCNNNNNNNGG 2 cut(s) 53, 265
BseMI GCAATG 1 cut(s) 180
BseNI ACTGG 1 cut(s) 168
BseRI GAGGAG 1 cut(s) 128
BshFI GGCC 1 cut(s) 57
BsiHKCI CYCGRG 1 cut(s) 188
BsiSI CCGG 1 cut(s) 162
BslI CCNNNNNNNGG 2 cut(s) 53, 265
BsmAI GTCTC 1 cut(s) 185
BsnI GGCC 1 cut(s) 57
Bso31I GGTCTC 1 cut(s) 185
BsoBI CYCGRG 1 cut(s) 188
Bsp143I GATC 1 cut(s) 164
BspACI CCGC 1 cut(s) 259
BspANI GGCC 1 cut(s) 57
BspLI GGNNCC 1 cut(s) 166
BspPI GGATC 2 cut(s) 159, 172
BspTNI GGTCTC 1 cut(s) 185
BsrDI GCAATG 1 cut(s) 180
BsrI ACTGG 1 cut(s) 168
BssECI CCNNGG 1 cut(s) 52
BssMI GATC 1 cut(s) 164
BssT1I CCWWGG 1 cut(s) 52
BstEII GGTNACC 1 cut(s) 121
BstKTI GATC 1 cut(s) 167
BstMAI GTCTC 1 cut(s) 185
BstMBI GATC 1 cut(s) 164
BstPI GGTNACC 1 cut(s) 121
BstX2I RGATCY 1 cut(s) 164
BstYI RGATCY 1 cut(s) 164
BsuRI GGCC 1 cut(s) 57
CseI GACGC 1 cut(s) 254
CviAII CATG 2 cut(s) 70, 158
CviJI RGCY 4 cut(s) 23, 57, 88, 207
CviKI_1 RGCY 4 cut(s) 23, 57, 88, 207
DpnI GATC 1 cut(s) 166
DpnII GATC 1 cut(s) 164
DriI GACNNNNNGTC 1 cut(s) 110
Eam1105I GACNNNNNGTC 1 cut(s) 110
Eco130I CCWWGG 1 cut(s) 52
Eco31I GGTCTC 1 cut(s) 185
Eco88I CYCGRG 1 cut(s) 188
Eco91I GGTNACC 1 cut(s) 121
EcoO65I GGTNACC 1 cut(s) 121
EcoT14I CCWWGG 1 cut(s) 52
ErhI CCWWGG 1 cut(s) 52
FaeI CATG 2 cut(s) 73, 161
FaiI YATR 4 cut(s) 60, 71, 159, 225
FatI CATG 2 cut(s) 69, 157
HaeIII GGCC 1 cut(s) 57
HapII CCGG 1 cut(s) 162
HgaI GACGC 1 cut(s) 254
Hin1II CATG 2 cut(s) 73, 161
HindIII AAGCTT 1 cut(s) 86
HinfI GANTC 1 cut(s) 105
HpaII CCGG 1 cut(s) 162
HphI GGTGA 1 cut(s) 115
Hpy188I TCNGA 1 cut(s) 202
Hpy188III TCNNGA 1 cut(s) 190
HpyCH4V TGCA 2 cut(s) 177, 227
Hsp92II CATG 2 cut(s) 73, 161
Kzo9I GATC 1 cut(s) 164
LpnPI CCDG 2 cut(s) 175, 181
MaeIII GTNAC 2 cut(s) 112, 121
MalI GATC 1 cut(s) 166
MboI GATC 1 cut(s) 164
MflI RGATCY 1 cut(s) 164
MluCI AATT 1 cut(s) 77
MlyI GAGTC 1 cut(s) 99
MmeI TCCRAC 1 cut(s) 71
MnlI CCTC 4 cut(s) 149, 197, 208, 212
MseI TTAA 1 cut(s) 279
MspI CCGG 1 cut(s) 162
NdeII GATC 1 cut(s) 164
NlaIII CATG 2 cut(s) 73, 161
NlaIV GGNNCC 1 cut(s) 166
NmuCI GTSAC 2 cut(s) 112, 121
PaeR7I CTCGAG 1 cut(s) 188
PleI GAGTC 1 cut(s) 99
PpsI GAGTC 1 cut(s) 99
PspEI GGTNACC 1 cut(s) 121
PspN4I GGNNCC 1 cut(s) 166
PsuI RGATCY 1 cut(s) 164
SaqAI TTAA 1 cut(s) 279
Sau3AI GATC 1 cut(s) 164
SchI GAGTC 1 cut(s) 99
SetI ASST 3 cut(s) 25, 44, 90
Sfr274I CTCGAG 1 cut(s) 188
SlaI CTCGAG 1 cut(s) 188
SmlI CTYRAG 1 cut(s) 188
SmoI CTYRAG 1 cut(s) 188
Sse9I AATT 1 cut(s) 77
SsiI CCGC 1 cut(s) 259
StyI CCWWGG 1 cut(s) 52
TaqI TCGA 1 cut(s) 189
TasI AATT 1 cut(s) 77
Tru1I TTAA 1 cut(s) 279
Tru9I TTAA 1 cut(s) 279
TseFI GTSAC 2 cut(s) 112, 121
Tsp45I GTSAC 2 cut(s) 112, 121
XhoI CTCGAG 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.