Rroxscaffold_7G00186520

UDP-glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000284
Physical Location & Seq
Reverse (-)
25862855 .. 25865171
2317 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00186520.1

Sequence Viewer

Length: 1386 bp
ATGGAGAAGGAACAGAAAGCCTGCTACAAAGCTCATTGTTTGGTCCTACCCTTTCCAACCCAAGGCCACGTTAATCCCATGCTCCAATTCTCCAAGCGCTTAGAGCGCAAAGGCCTCAAAGTCACACTCGTCGCAACCCAGTCATTTCACAAGCTCTCATCATCGCCGTCCACGTCCATTACATTAGAGAGCATATCCGATGGCTATGACGAAGGCGGGATGGCGGCAGCGGAGAGCATTGATGCCTATCTAGACAGCTTCCGCGAAGTCGGGTCAAAGACCATGACGGGGCTCATCAAGAAGCTCTCGAACTCGGGGCACAAAGTTGATTGCATTGTTTATGATGCGTTTATGCCTTGGCCGCTGGAAGTGGCCAAAAGGTTTGGGATTGTTGGGGTAACTTTCTTCACTCAGTCTTGTGCTGTTGACAACATATACTACAATGTCCAACAGGGTTTGCTCAAAGTTCCATGTACTAATGAGTCTGAGATCGTGCTTCCGGGATTGTCCGTACCGCTACAAGCTTCGGATATGCCTTCTTTCGTTTCTGTACCTGCACAGTACCCGGCTTTCTTTAAAATGGTTGTGGATCAGTTCTCCAATGTTGGCAAAGCTGATTTGATCCTCTGCAACACATTTTATGAGCTGGAAATAGAGGAGGTGGATTGGATGGCAAAGCTCTGGCCATTGAGGACGATTGGTCCAACCATACCATCCATGTACTTGGATAAACGACATGAGGATGACAAAGAATATGGCTTTAGCCTCTTTAAGCCAAATAGTGATGCCTGCATGATGAATTGGCTAAACGAGCGACCGAAATGGTCAGTAGCTTATGTGTCATTTGGCAGCTTAGCAGAGCTAGGAGCCGAGCAAATGGAGGAATTGGCTCGCGGTTTGAAGAAGAGCAACATCTATTTCTTGTGGGTGGTGAGAGAAAAAGAAGCAACCAAGATCCCAAAAGGGTTTGTGGAGGAGATATCAGAGAGAGGTATGGTGGTTTCATGGTGTCACCAATTGGAGGTTTTGCAACATGAAGCAGTTGGTTGCTTCGTGACGCATTGCGGTTGGAACTCGACCTTGGAGGCTTTGAGTTTAGGGGTTCCAATGGTTGCAGTGCCACAGTGGACTGACCAAAGCACTAATGCAAAGTATATTATGGATGTGTGGAAAATGGGGCTTAAAGCTCGGGCTGATGAGAAAGGGATAGTGAGACAAGAAGAAATATCAAATTGTGTGAGAGAAATATTGGAAGGAGAGACGGGGAAAGAAATTCAGAAGAATGCTTTGAAGTGGAAAGAATTGGCTAGAAAGGCTGTGGATGAAGGTGGAAGTTCTGATAGAAACATTGATGAGTTTATTGCAAAGCTGGTTCAACCTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko00380 ko00966 ko01110 ko01210 map00380 map00966 map01110 map01210
Pfam Domains
Protein Families
UDPGT

Protein Analysis

461

Amino Acids

51.8

Weight (kDa)

5.49

Isoelectric Point (pI)

44.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 14 - 50 4.9e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 272 - 424 1.6e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 562
AccII CGCG 2 cut(s) 264, 894
AciI CCGC 8 cut(s) 216, 224, 230, 262, 362, 515, 894, 1065
AclWI GGATC 3 cut(s) 597, 616, 949
AcoI YGGCCR 3 cut(s) 359, 372, 683
AcsI RAATTY 1 cut(s) 1272
AfaI GTAC 5 cut(s) 475, 513, 552, 563, 722
AfeI AGCGCT 1 cut(s) 98
AfiI CCNNNNNNNGG 3 cut(s) 62, 288, 1021
AgsI TTSAA 3 cut(s) 901, 1291, 1376
AhdI GACNNNNNGTC 1 cut(s) 699
AjiI CACGTC 1 cut(s) 174
AjuI GAANNNNNNNTTGG 2 cut(s) 1064, 1096
Alw26I GTCTC 2 cut(s) 1207, 1253
AlwI GGATC 3 cut(s) 597, 616, 949
Ama87I CYCGRG 2 cut(s) 313, 1188
Aor51HI AGCGCT 1 cut(s) 98
AoxI GGCC 5 cut(s) 64, 112, 359, 372, 683
ApeKI GCWGC 2 cut(s) 227, 849
ApoI RAATTY 1 cut(s) 1272
AspLEI GCGC 2 cut(s) 99, 108
AspS9I GGNCC 2 cut(s) 43, 701
AsuC2I CCSGG 2 cut(s) 501, 566
AsuHPI GGTGA 2 cut(s) 943, 1004
AvaI CYCGRG 2 cut(s) 313, 1188
AvaII GGWCC 2 cut(s) 43, 701
BaeGI GKGCMC 1 cut(s) 321
BalI TGGCCA 2 cut(s) 374, 685
BanII GRGCYC 1 cut(s) 294
BbvI GCAGC 2 cut(s) 239, 861
BccI CCATC 4 cut(s) 194, 214, 664, 721
BceAI ACGGC 1 cut(s) 151
BcnI CCSGG 2 cut(s) 501, 566
BcoDI GTCTC 2 cut(s) 1207, 1253
BfaI CTAG 4 cut(s) 251, 863, 1308, 1380
BfoI RGCGCY 1 cut(s) 100
BfuAI ACCTGC 1 cut(s) 562
BisI GCNGC 4 cut(s) 225, 228, 362, 850
BlpI GCTNAGC 1 cut(s) 853
BlsI GCNGC 4 cut(s) 226, 229, 363, 851
Bme1390I CCNGG 2 cut(s) 501, 566
Bme18I GGWCC 2 cut(s) 43, 701
BmeRI GACNNNNNGTC 1 cut(s) 699
BmeT110I CYCGRG 2 cut(s) 313, 1188
BmgBI CACGTC 1 cut(s) 174
BmgT120I GGNCC 2 cut(s) 43, 701
BmiI GGNNCC 2 cut(s) 868, 1104
BmrFI CCNGG 2 cut(s) 501, 566
BmrI ACTGGG 1 cut(s) 133
BmsI GCATC 3 cut(s) 232, 334, 775
BmuI ACTGGG 1 cut(s) 133
Bpu1102I GCTNAGC 1 cut(s) 853
BpuMI CCSGG 2 cut(s) 501, 566
BsaBI GATNNNNATC 1 cut(s) 246
BsaJI CCNNGG 3 cut(s) 61, 356, 1080
Bsc4I CCNNNNNNNGG 3 cut(s) 62, 288, 1021
Bse1I ACTGG 1 cut(s) 139
Bse3DI GCAATG 1 cut(s) 1060
Bse8I GATNNNNATC 1 cut(s) 246
BseDI CCNNGG 3 cut(s) 61, 356, 1080
BseGI GGATG 6 cut(s) 225, 675, 713, 748, 1168, 1327
BseJI GATNNNNATC 1 cut(s) 246
BseLI CCNNNNNNNGG 3 cut(s) 62, 288, 1021
BseMI GCAATG 1 cut(s) 1060
BseMII CTCAG 2 cut(s) 425, 477
BseNI ACTGG 1 cut(s) 139
BseRI GAGGAG 2 cut(s) 671, 989
BseSI GKGCMC 1 cut(s) 321
BseXI GCAGC 2 cut(s) 239, 861
BsgI GTGCAG 1 cut(s) 540
Bsh1236I CGCG 2 cut(s) 264, 894
Bsh1285I CGRYCG 1 cut(s) 818
BshFI GGCC 5 cut(s) 66, 114, 361, 374, 685
BsiEI CGRYCG 1 cut(s) 818
BsiHKCI CYCGRG 2 cut(s) 313, 1188
BsiSI CCGG 2 cut(s) 500, 566
BslI CCNNNNNNNGG 3 cut(s) 62, 288, 1021
BsmAI GTCTC 2 cut(s) 1207, 1253
BsmBI CGTCTC 1 cut(s) 1253
BsmI GAATGC 1 cut(s) 1288
BsnI GGCC 5 cut(s) 66, 114, 361, 374, 685
BsoBI CYCGRG 2 cut(s) 313, 1188
Bsp1286I GDGCHC 2 cut(s) 294, 321
Bsp143I GATC 4 cut(s) 489, 589, 621, 954
Bsp1720I GCTNAGC 1 cut(s) 853
BspACI CCGC 8 cut(s) 216, 224, 230, 262, 362, 515, 894, 1065
BspANI GGCC 5 cut(s) 66, 114, 361, 374, 685
BspCNI CTCAG 2 cut(s) 424, 478
BspFNI CGCG 2 cut(s) 264, 894
BspLI GGNNCC 2 cut(s) 868, 1104
BspMI ACCTGC 1 cut(s) 562
BspPI GGATC 3 cut(s) 597, 616, 949
BspQI GCTCTTC 1 cut(s) 899
BsrDI GCAATG 1 cut(s) 1060
BsrI ACTGG 1 cut(s) 139
BssECI CCNNGG 3 cut(s) 61, 356, 1080
BssMI GATC 4 cut(s) 489, 589, 621, 954
BssT1I CCWWGG 3 cut(s) 61, 356, 1080
Bst4CI ACNGT 2 cut(s) 561, 1125
Bst6I CTCTTC 1 cut(s) 899
BstC8I GCNNGC 3 cut(s) 22, 790, 892
BstDEI CTNAG 4 cut(s) 100, 411, 486, 853
BstF5I GGATG 6 cut(s) 225, 675, 713, 748, 1168, 1327
BstFNI CGCG 2 cut(s) 264, 894
BstH2I RGCGCY 1 cut(s) 100
BstHHI GCGC 2 cut(s) 99, 108
BstKTI GATC 4 cut(s) 492, 592, 624, 957
BstMAI GTCTC 2 cut(s) 1207, 1253
BstMBI GATC 4 cut(s) 489, 589, 621, 954
BstMCI CGRYCG 1 cut(s) 818
BstMWI GCNNNNNNNGC 5 cut(s) 103, 105, 361, 811, 1313
BstSCI CCNGG 2 cut(s) 499, 564
BstSLI GKGCMC 1 cut(s) 321
BstUI CGCG 2 cut(s) 264, 894
BstV1I GCAGC 2 cut(s) 239, 861
BstX2I RGATCY 1 cut(s) 954
BstXI CCANNNNNNTGG 1 cut(s) 724
BstYI RGATCY 1 cut(s) 954
BsuRI GGCC 5 cut(s) 66, 114, 361, 374, 685
BtgZI GCGATG 1 cut(s) 147
BtrI CACGTC 1 cut(s) 174
BtsCI GGATG 6 cut(s) 225, 675, 713, 748, 1168, 1327
BtsI GCAGTG 1 cut(s) 1122
BtsIMutI CAGTG 2 cut(s) 1122, 1130
BveI ACCTGC 1 cut(s) 562
Cac8I GCNNGC 3 cut(s) 22, 790, 892
CfoI GCGC 2 cut(s) 99, 108
Cfr13I GGNCC 2 cut(s) 43, 701
CseI GACGC 1 cut(s) 1066
Csp6I GTAC 5 cut(s) 474, 512, 551, 562, 721
CviAII CATG 8 cut(s) 79, 283, 471, 718, 737, 793, 1005, 1034
CviQI GTAC 5 cut(s) 474, 512, 551, 562, 721
DdeI CTNAG 4 cut(s) 100, 411, 486, 853
DpnI GATC 4 cut(s) 491, 591, 623, 956
DpnII GATC 4 cut(s) 489, 589, 621, 954
DraI TTTAAA 1 cut(s) 577
DriI GACNNNNNGTC 1 cut(s) 699
EaeI YGGCCR 3 cut(s) 359, 372, 683
Eam1104I CTCTTC 1 cut(s) 899
Eam1105I GACNNNNNGTC 1 cut(s) 699
EarI CTCTTC 1 cut(s) 899
Eco130I CCWWGG 3 cut(s) 61, 356, 1080
Eco147I AGGCCT 1 cut(s) 114
Eco24I GRGCYC 1 cut(s) 294
Eco32I GATATC 1 cut(s) 981
Eco47I GGWCC 2 cut(s) 43, 701
Eco47III AGCGCT 1 cut(s) 98
Eco88I CYCGRG 2 cut(s) 313, 1188
EcoRV GATATC 1 cut(s) 981
EcoT14I CCWWGG 3 cut(s) 61, 356, 1080
EcoT38I GRGCYC 1 cut(s) 294
ErhI CCWWGG 3 cut(s) 61, 356, 1080
Esp3I CGTCTC 1 cut(s) 1253
FaeI CATG 8 cut(s) 82, 286, 474, 721, 740, 796, 1008, 1037
FatI CATG 8 cut(s) 78, 282, 470, 717, 736, 792, 1004, 1033
FauI CCCGC 1 cut(s) 209
Fnu4HI GCNGC 4 cut(s) 225, 228, 362, 850
FokI GGATG 6 cut(s) 232, 682, 700, 755, 1175, 1334
FriOI GRGCYC 1 cut(s) 294
Fsp4HI GCNGC 4 cut(s) 225, 228, 362, 850
FspBI CTAG 4 cut(s) 251, 863, 1308, 1380
GlaI GCGC 2 cut(s) 98, 107
GluI GCNGC 4 cut(s) 225, 228, 362, 850
HaeII RGCGCY 1 cut(s) 100
HaeIII GGCC 5 cut(s) 66, 114, 361, 374, 685
HapII CCGG 2 cut(s) 500, 566
HgaI GACGC 1 cut(s) 1066
HhaI GCGC 2 cut(s) 99, 108
Hin1II CATG 8 cut(s) 82, 286, 474, 721, 740, 796, 1008, 1037
Hin6I GCGC 2 cut(s) 97, 106
HinP1I GCGC 2 cut(s) 97, 106
HincII GTYRAC 1 cut(s) 427
HindII GTYRAC 1 cut(s) 427
HindIII AAGCTT 1 cut(s) 522
HinfI GANTC 1 cut(s) 482
HpaII CCGG 2 cut(s) 500, 566
HphI GGTGA 2 cut(s) 943, 1004
Hpy166II GTNNAC 3 cut(s) 171, 427, 1128
Hpy188I TCNGA 6 cut(s) 199, 487, 529, 985, 1278, 1339
Hpy188III TCNNGA 4 cut(s) 251, 298, 307, 1054
Hpy8I GTNNAC 3 cut(s) 171, 427, 1128
Hpy99I CGWCG 1 cut(s) 134
HpyAV CCTTC 4 cut(s) 206, 546, 1247, 1319
HpyCH4III ACNGT 2 cut(s) 561, 1125
HpyCH4IV ACGT 2 cut(s) 69, 173
HpyCH4V TGCA 8 cut(s) 333, 557, 630, 792, 1030, 1115, 1148, 1364
HpyF10VI GCNNNNNNNGC 5 cut(s) 103, 105, 361, 811, 1313
HpyF3I CTNAG 4 cut(s) 100, 411, 486, 853
HpySE526I ACGT 2 cut(s) 69, 173
Hsp92II CATG 8 cut(s) 82, 286, 474, 721, 740, 796, 1008, 1037
HspAI GCGC 2 cut(s) 97, 106
Kzo9I GATC 4 cut(s) 489, 589, 621, 954
LguI GCTCTTC 1 cut(s) 899
LmnI GCTCC 2 cut(s) 87, 866
Lsp1109I GCAGC 2 cut(s) 239, 861
LweI GCATC 3 cut(s) 232, 334, 775
MaeI CTAG 4 cut(s) 251, 863, 1308, 1380
MaeII ACGT 2 cut(s) 69, 173
MaeIII GTNAC 4 cut(s) 121, 397, 1010, 1054
MalI GATC 4 cut(s) 491, 591, 623, 956
MboI GATC 4 cut(s) 489, 589, 621, 954
MboII GAAGA 5 cut(s) 397, 913, 916, 1232, 1291
MfeI CAATTG 1 cut(s) 1016
MflI RGATCY 1 cut(s) 954
MhlI GDGCHC 2 cut(s) 294, 321
MlsI TGGCCA 2 cut(s) 374, 685
MluCI AATT 7 cut(s) 86, 799, 884, 1016, 1231, 1272, 1301
MluNI TGGCCA 2 cut(s) 374, 685
MlyI GAGTC 1 cut(s) 491
MmeI TCCRAC 4 cut(s) 80, 472, 728, 1049
Mox20I TGGCCA 2 cut(s) 374, 685
MscI TGGCCA 2 cut(s) 374, 685
MseI TTAA 4 cut(s) 72, 576, 771, 1182
MslI CAYNNNNRTG 1 cut(s) 741
Msp20I TGGCCA 2 cut(s) 374, 685
MspA1I CMGCKG 2 cut(s) 230, 364
MspI CCGG 2 cut(s) 500, 566
MspR9I CCNGG 2 cut(s) 501, 566
MunI CAATTG 1 cut(s) 1016
Mva1269I GAATGC 1 cut(s) 1288
MvnI CGCG 2 cut(s) 264, 894
MwoI GCNNNNNNNGC 5 cut(s) 103, 105, 361, 811, 1313
NciI CCSGG 2 cut(s) 501, 566
NdeII GATC 4 cut(s) 489, 589, 621, 954
NlaIII CATG 8 cut(s) 82, 286, 474, 721, 740, 796, 1008, 1037
NlaIV GGNNCC 2 cut(s) 868, 1104
NmeAIII GCCGAG 1 cut(s) 895
NmuCI GTSAC 3 cut(s) 121, 1010, 1054
PceI AGGCCT 1 cut(s) 114
PciSI GCTCTTC 1 cut(s) 899
PcsI WCGNNNNNNNCGW 1 cut(s) 170
PctI GAATGC 1 cut(s) 1288
PfoI TCCNGGA 1 cut(s) 499
PkrI GCNGC 4 cut(s) 226, 229, 363, 851
PleI GAGTC 1 cut(s) 490
PpsI GAGTC 1 cut(s) 490
PspN4I GGNNCC 2 cut(s) 868, 1104
PspPI GGNCC 2 cut(s) 43, 701
PsuI RGATCY 1 cut(s) 954
RsaI GTAC 5 cut(s) 475, 513, 552, 563, 722
RsaNI GTAC 5 cut(s) 474, 512, 551, 562, 721
RseI CAYNNNNRTG 1 cut(s) 741
SapI GCTCTTC 1 cut(s) 899
SaqAI TTAA 4 cut(s) 72, 576, 771, 1182
SatI GCNGC 4 cut(s) 225, 228, 362, 850
Sau3AI GATC 4 cut(s) 489, 589, 621, 954
Sau96I GGNCC 2 cut(s) 43, 701
SchI GAGTC 1 cut(s) 491
ScrFI CCNGG 2 cut(s) 501, 566
SduI GDGCHC 2 cut(s) 294, 321
SfaNI GCATC 3 cut(s) 232, 334, 775
SinI GGWCC 2 cut(s) 43, 701
SmiMI CAYNNNNRTG 1 cut(s) 741
Sse9I AATT 7 cut(s) 86, 799, 884, 1016, 1231, 1272, 1301
SseBI AGGCCT 1 cut(s) 114
SsiI CCGC 8 cut(s) 216, 224, 230, 262, 362, 515, 894, 1065
SspI AATATT 1 cut(s) 1248
SspMI CTAG 4 cut(s) 251, 863, 1308, 1380
StuI AGGCCT 1 cut(s) 114
StyD4I CCNGG 2 cut(s) 499, 564
StyI CCWWGG 3 cut(s) 61, 356, 1080
TaaI ACNGT 2 cut(s) 561, 1125
TaiI ACGT 2 cut(s) 72, 176
TaqI TCGA 2 cut(s) 308, 1076
TaqII GACCGA 1 cut(s) 832
TasI AATT 7 cut(s) 86, 799, 884, 1016, 1231, 1272, 1301
TatI WGTACW 2 cut(s) 473, 720
TauI GCSGC 2 cut(s) 227, 364
Tru1I TTAA 4 cut(s) 72, 576, 771, 1182
Tru9I TTAA 4 cut(s) 72, 576, 771, 1182
TscAI CASTG 2 cut(s) 1122, 1130
TseFI GTSAC 3 cut(s) 121, 1010, 1054
TseI GCWGC 2 cut(s) 227, 849
Tsp45I GTSAC 3 cut(s) 121, 1010, 1054
TspDTI ATGAA 4 cut(s) 812, 993, 1050, 1338
TspGWI ACGGA 1 cut(s) 499
TspRI CASTG 2 cut(s) 1122, 1130
VpaK11BI GGWCC 2 cut(s) 43, 701
XapI RAATTY 1 cut(s) 1272
XbaI TCTAGA 1 cut(s) 250
XspI CTAG 4 cut(s) 251, 863, 1308, 1380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.