Rh6AG258500

UDP-glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
45007741 .. 45008466
726 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG258500.1

Sequence Viewer

Length: 726 bp
ATGGCAAAGTTCTGGCCATTGAGGACGATCGGTCCAACTATACCATCCATGTATTTGGATAAACGACATGAGGATGACAAAGAATATGGCTTCAGCCTCTTTAAGCCAAATAGTGATGCCTGCATGAAATGGCTAAAGGAACGACAAAAAGGATCAGTAGCTTATGTGTCATTTGGCAGCTTAGCAGAGCTTGGAGCTGAGCAAATGGAGGAACTGGGCTGGGGTTTAAAGAACAGCAACATCTACTTCTTGTGGGTGGTCAGAGAAAAAGAAGCAAACAAGCTTCCAAGAGGGTTTGCAGAGGCGATATCGGAGAAGGGTTTGGTGGTCTCATGGTGTCCCCAATTGGAGGTTTTGGCAACCGAAGCTGTTGGTTGTTTCGTTACACATTGCGGTTGGAACTCGACTTTGGAGGCATTGAGCTTAGGGGTTCCAATGGTTGCAGTGCCACAATGGACTGATCAGAGCACTAATGCAAAGTATATCATGGATGTATGGAAAATGGGGCTTAGAGCTCAAGCTGATGAGAAAGGGATAGTGAGACGGGAAGAAATAGAATATTGTGTGAGAGAAATATTGGAGAGAGAGAGAGGGAAAGAGATACAAAAGAATGCTTGGAAGTGGAAAGAATTGGCTAGAAAGGCTGTGGATAAAGGAGGAAGTTCTGATAGAAACATTGATGAGTTCATTGCAAAACTGGTTCAGCATGCACATGCAGCTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
Pfam Domains
Protein Families

Protein Analysis

241

Amino Acids

27.45

Weight (kDa)

6.91

Isoelectric Point (pI)

38.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 38 - 169 9.3e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 393
AclWI GGATC 1 cut(s) 160
AcoI YGGCCR 1 cut(s) 14
AcuI CTGAAG 1 cut(s) 76
AfiI CCNNNNNNNGG 1 cut(s) 349
AhdI GACNNNNNGTC 1 cut(s) 30
AjuI GAANNNNNNNTTGG 2 cut(s) 392, 424
Alw21I GWGCWC 2 cut(s) 470, 517
Alw26I GTCTC 2 cut(s) 334, 535
AlwI GGATC 1 cut(s) 160
AoxI GGCC 1 cut(s) 14
ApeKI GCWGC 2 cut(s) 177, 716
AspS9I GGNCC 1 cut(s) 32
AsuNHI GCTAGC 1 cut(s) 719
AvaII GGWCC 1 cut(s) 32
BalI TGGCCA 1 cut(s) 16
BanII GRGCYC 1 cut(s) 517
Bbv12I GWGCWC 2 cut(s) 470, 517
BbvI GCAGC 1 cut(s) 189
BccI CCATC 1 cut(s) 52
BclI TGATCA 1 cut(s) 460
BcoDI GTCTC 2 cut(s) 334, 535
BfaI CTAG 3 cut(s) 636, 720, 724
BisI GCNGC 2 cut(s) 178, 717
BlpI GCTNAGC 2 cut(s) 181, 198
BlsI GCNGC 2 cut(s) 179, 718
Bme18I GGWCC 1 cut(s) 32
BmeRI GACNNNNNGTC 1 cut(s) 30
BmgT120I GGNCC 1 cut(s) 32
BmiI GGNNCC 1 cut(s) 432
BmrI ACTGGG 1 cut(s) 224
BmsI GCATC 1 cut(s) 106
BmtI GCTAGC 1 cut(s) 723
BmuI ACTGGG 1 cut(s) 224
Bpu10I CCTNAGC 1 cut(s) 424
Bpu1102I GCTNAGC 2 cut(s) 181, 198
BpuEI CTTGAG 1 cut(s) 501
BsaI GGTCTC 1 cut(s) 334
Bsc4I CCNNNNNNNGG 1 cut(s) 349
Bse1I ACTGG 2 cut(s) 219, 702
Bse3DI GCAATG 2 cut(s) 388, 687
BseGI GGATG 3 cut(s) 44, 79, 496
BseLI CCNNNNNNNGG 1 cut(s) 349
BseMI GCAATG 2 cut(s) 388, 687
BseMII CTCAG 1 cut(s) 189
BseNI ACTGG 2 cut(s) 219, 702
BseXI GCAGC 1 cut(s) 189
BseYI CCCAGC 1 cut(s) 219
Bsh1285I CGRYCG 1 cut(s) 30
BshFI GGCC 1 cut(s) 16
BsiEI CGRYCG 1 cut(s) 30
BsiHKAI GWGCWC 2 cut(s) 470, 517
BslFI GGGAC 1 cut(s) 324
BslI CCNNNNNNNGG 1 cut(s) 349
BsmAI GTCTC 2 cut(s) 334, 535
BsmBI CGTCTC 1 cut(s) 535
BsmFI GGGAC 1 cut(s) 324
BsmI GAATGC 1 cut(s) 616
BsnI GGCC 1 cut(s) 16
Bso31I GGTCTC 1 cut(s) 334
Bsp1286I GDGCHC 2 cut(s) 470, 517
Bsp143I GATC 3 cut(s) 27, 152, 460
Bsp1720I GCTNAGC 2 cut(s) 181, 198
BspACI CCGC 1 cut(s) 393
BspANI GGCC 1 cut(s) 16
BspCNI CTCAG 1 cut(s) 190
BspLI GGNNCC 1 cut(s) 432
BspOI GCTAGC 1 cut(s) 723
BspPI GGATC 1 cut(s) 160
BspTNI GGTCTC 1 cut(s) 334
BsrDI GCAATG 2 cut(s) 388, 687
BsrI ACTGG 2 cut(s) 219, 702
BssMI GATC 3 cut(s) 27, 152, 460
BstC8I GCNNGC 3 cut(s) 121, 708, 721
BstDEI CTNAG 4 cut(s) 181, 198, 424, 509
BstF5I GGATG 3 cut(s) 44, 79, 496
BstKTI GATC 3 cut(s) 30, 155, 463
BstMAI GTCTC 2 cut(s) 334, 535
BstMBI GATC 3 cut(s) 27, 152, 460
BstMCI CGRYCG 1 cut(s) 30
BstMWI GCNNNNNNNGC 3 cut(s) 365, 641, 716
BstNSI RCATGY 2 cut(s) 710, 716
BstV1I GCAGC 1 cut(s) 189
BstXI CCANNNNNNTGG 1 cut(s) 55
BsuRI GGCC 1 cut(s) 16
BtsCI GGATG 3 cut(s) 44, 79, 496
BtsI GCAGTG 1 cut(s) 450
BtsIMutI CAGTG 1 cut(s) 450
Cac8I GCNNGC 3 cut(s) 121, 708, 721
Cfr13I GGNCC 1 cut(s) 32
CviAII CATG 7 cut(s) 49, 68, 124, 333, 487, 707, 713
DdeI CTNAG 4 cut(s) 181, 198, 424, 509
DpnI GATC 3 cut(s) 29, 154, 462
DpnII GATC 3 cut(s) 27, 152, 460
DraI TTTAAA 1 cut(s) 228
DriI GACNNNNNGTC 1 cut(s) 30
EaeI YGGCCR 1 cut(s) 14
Eam1105I GACNNNNNGTC 1 cut(s) 30
Ecl136II GAGCTC 1 cut(s) 515
Eco24I GRGCYC 1 cut(s) 517
Eco31I GGTCTC 1 cut(s) 334
Eco32I GATATC 1 cut(s) 309
Eco47I GGWCC 1 cut(s) 32
Eco53kI GAGCTC 1 cut(s) 515
Eco57I CTGAAG 1 cut(s) 76
EcoICRI GAGCTC 1 cut(s) 515
EcoRV GATATC 1 cut(s) 309
EcoT38I GRGCYC 1 cut(s) 517
Esp3I CGTCTC 1 cut(s) 535
FaeI CATG 7 cut(s) 52, 71, 127, 336, 490, 710, 716
FaqI GGGAC 1 cut(s) 324
FatI CATG 7 cut(s) 48, 67, 123, 332, 486, 706, 712
FbaI TGATCA 1 cut(s) 460
Fnu4HI GCNGC 2 cut(s) 178, 717
FokI GGATG 3 cut(s) 31, 86, 503
FriOI GRGCYC 1 cut(s) 517
Fsp4HI GCNGC 2 cut(s) 178, 717
FspBI CTAG 3 cut(s) 636, 720, 724
GluI GCNGC 2 cut(s) 178, 717
GsaI CCCAGC 1 cut(s) 223
HaeIII GGCC 1 cut(s) 16
Hin1II CATG 7 cut(s) 52, 71, 127, 336, 490, 710, 716
HindIII AAGCTT 1 cut(s) 281
Hpy188I TCNGA 4 cut(s) 263, 313, 465, 667
HpyAV CCTTC 1 cut(s) 310
HpyCH4V TGCA 7 cut(s) 123, 299, 443, 476, 692, 710, 716
HpyF10VI GCNNNNNNNGC 3 cut(s) 365, 641, 716
HpyF3I CTNAG 4 cut(s) 181, 198, 424, 509
Hsp92II CATG 7 cut(s) 52, 71, 127, 336, 490, 710, 716
Ksp22I TGATCA 1 cut(s) 460
Kzo9I GATC 3 cut(s) 27, 152, 460
LmnI GCTCC 1 cut(s) 194
LpnPI CCDG 4 cut(s) 133, 200, 205, 683
Lsp1109I GCAGC 1 cut(s) 189
LweI GCATC 1 cut(s) 106
MaeI CTAG 3 cut(s) 636, 720, 724
MaeIII GTNAC 1 cut(s) 382
MalI GATC 3 cut(s) 29, 154, 462
MboI GATC 3 cut(s) 27, 152, 460
MboII GAAGA 1 cut(s) 560
MfeI CAATTG 1 cut(s) 344
MhlI GDGCHC 2 cut(s) 470, 517
MlsI TGGCCA 1 cut(s) 16
MluCI AATT 2 cut(s) 344, 629
MluNI TGGCCA 1 cut(s) 16
MmeI TCCRAC 2 cut(s) 59, 377
Mox20I TGGCCA 1 cut(s) 16
MscI TGGCCA 1 cut(s) 16
MseI TTAA 2 cut(s) 102, 227
MslI CAYNNNNRTG 2 cut(s) 72, 711
Msp20I TGGCCA 1 cut(s) 16
MunI CAATTG 1 cut(s) 344
Mva1269I GAATGC 1 cut(s) 616
MwoI GCNNNNNNNGC 3 cut(s) 365, 641, 716
NdeII GATC 3 cut(s) 27, 152, 460
NheI GCTAGC 1 cut(s) 719
NlaIII CATG 7 cut(s) 52, 71, 127, 336, 490, 710, 716
NlaIV GGNNCC 1 cut(s) 432
NspI RCATGY 2 cut(s) 710, 716
PaeI GCATGC 1 cut(s) 710
PctI GAATGC 1 cut(s) 616
PkrI GCNGC 2 cut(s) 179, 718
Ple19I CGATCG 1 cut(s) 30
Psp124BI GAGCTC 1 cut(s) 517
PspFI CCCAGC 1 cut(s) 219
PspN4I GGNNCC 1 cut(s) 432
PspPI GGNCC 1 cut(s) 32
PvuI CGATCG 1 cut(s) 30
RseI CAYNNNNRTG 2 cut(s) 72, 711
SacI GAGCTC 1 cut(s) 517
SaqAI TTAA 2 cut(s) 102, 227
SatI GCNGC 2 cut(s) 178, 717
Sau3AI GATC 3 cut(s) 27, 152, 460
Sau96I GGNCC 1 cut(s) 32
SduI GDGCHC 2 cut(s) 470, 517
SfaNI GCATC 1 cut(s) 106
SinI GGWCC 1 cut(s) 32
SmiMI CAYNNNNRTG 2 cut(s) 72, 711
SmlI CTYRAG 1 cut(s) 516
SmoI CTYRAG 1 cut(s) 516
SphI GCATGC 1 cut(s) 710
Sse9I AATT 2 cut(s) 344, 629
SsiI CCGC 1 cut(s) 393
SspI AATATT 2 cut(s) 560, 576
SspMI CTAG 3 cut(s) 636, 720, 724
SstI GAGCTC 1 cut(s) 517
TaqI TCGA 1 cut(s) 404
TaqII GACCGA 1 cut(s) 20
TasI AATT 2 cut(s) 344, 629
Tru1I TTAA 2 cut(s) 102, 227
Tru9I TTAA 2 cut(s) 102, 227
TscAI CASTG 1 cut(s) 450
TseI GCWGC 2 cut(s) 177, 716
TspDTI ATGAA 2 cut(s) 140, 676
TspRI CASTG 1 cut(s) 450
VpaK11BI GGWCC 1 cut(s) 32
XceI RCATGY 2 cut(s) 710, 716
XspI CTAG 3 cut(s) 636, 720, 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.