Rh6BG041700

UDP-glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
6801344 .. 6802325
982 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG041700.1

Sequence Viewer

Length: 609 bp
ATGGTTGTTGGTCAGTTCTCTATTGTTGATGAGGCTGATTGGATTCTCTGCAACACATTTCATGAGTTGGAACCAGAAGTAGTAGATTGGATGTCGAAGCTTTGGCCATTGAAGACAATAGGACCAACCATACCATCCATGTACTTGGATAACAGACTTAAAGAGGACAAAGATTATGGTGGCAGTCTCTTCAAGCAAAATAATGATGCCTGCATGAAATGGCTCAATGAACAACCGAAGGTGTCTGTTGTTTATGTGTCATTTGGTAGTGGAGCAGAACTTGGAGCTGAGCAAATGGAGGAACTGGCTTGGGGATTGAGGAGCAGCAAAAGCAATTTCTTGTGGGTGGTTAGGGAATCAGAAGCAGGTAAGATCCCGAAAGGGTTTGTGGAGGAGACATCTGAGAACGGTTTGGTAGTCTCTTGGTGTCCCCAACTGGAGGTCTTGGCTCATGAAGCTGTTGGGTGCTTCATTACACATTGTGGTTGGAACTCTACATTGGAGGCTTTGAGTCTAGGGGTTCCACTGCTGGCAATGCCACAATGGACTGACCAAGGCACCAATGCCAAGTACATTATGGATGTGTGGAAACTGGACTTAAAGCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
Pfam Domains
Protein Families

Protein Analysis

202

Amino Acids

22.75

Weight (kDa)

4.64

Isoelectric Point (pI)

32.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 78 - 196 1.9e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 356
AccB1I GGYRCC 1 cut(s) 557
AclWI GGATC 1 cut(s) 367
AcoI YGGCCR 1 cut(s) 104
AdeI CACNNNGTG 1 cut(s) 482
AfaI GTAC 2 cut(s) 143, 572
AfiI CCNNNNNNNGG 1 cut(s) 439
AgsI TTSAA 2 cut(s) 112, 193
AjuI GAANNNNNNNTTGG 2 cut(s) 482, 514
AluBI AGCT 4 cut(s) 100, 287, 458, 604
AluI AGCT 4 cut(s) 100, 287, 458, 604
Alw26I GTCTC 3 cut(s) 191, 389, 424
AlwI GGATC 1 cut(s) 367
AoxI GGCC 1 cut(s) 104
ApeKI GCWGC 1 cut(s) 324
AspS9I GGNCC 1 cut(s) 122
AvaII GGWCC 1 cut(s) 122
BalI TGGCCA 1 cut(s) 106
BanI GGYRCC 1 cut(s) 557
BbsI GAAGAC 1 cut(s) 119
BbvI GCAGC 1 cut(s) 336
BccI CCATC 1 cut(s) 142
BcoDI GTCTC 3 cut(s) 191, 389, 424
BfaI CTAG 1 cut(s) 515
BfuAI ACCTGC 1 cut(s) 356
BisI GCNGC 1 cut(s) 325
BlpI GCTNAGC 1 cut(s) 288
BlsI GCNGC 1 cut(s) 326
Bme18I GGWCC 1 cut(s) 122
BmgT120I GGNCC 1 cut(s) 122
BmiI GGNNCC 3 cut(s) 72, 522, 559
BmsI GCATC 1 cut(s) 196
BpiI GAAGAC 1 cut(s) 119
BpmI CTGGAG 1 cut(s) 458
Bpu1102I GCTNAGC 1 cut(s) 288
BsaJI CCNNGG 1 cut(s) 553
Bsc4I CCNNNNNNNGG 1 cut(s) 439
Bse1I ACTGG 3 cut(s) 309, 441, 597
Bse3DI GCAATG 1 cut(s) 540
BseDI CCNNGG 1 cut(s) 553
BseGI GGATG 3 cut(s) 96, 134, 586
BseLI CCNNNNNNNGG 1 cut(s) 439
BseMI GCAATG 1 cut(s) 540
BseMII CTCAG 2 cut(s) 279, 393
BseNI ACTGG 3 cut(s) 309, 441, 597
BseRI GAGGAG 2 cut(s) 334, 407
BseXI GCAGC 1 cut(s) 336
BshFI GGCC 1 cut(s) 106
BshNI GGYRCC 1 cut(s) 557
BslFI GGGAC 1 cut(s) 414
BslI CCNNNNNNNGG 1 cut(s) 439
BsmAI GTCTC 3 cut(s) 191, 389, 424
BsmFI GGGAC 1 cut(s) 414
BsnI GGCC 1 cut(s) 106
Bsp143I GATC 1 cut(s) 372
Bsp1720I GCTNAGC 1 cut(s) 288
BspANI GGCC 1 cut(s) 106
BspCNI CTCAG 2 cut(s) 280, 394
BspHI TCATGA 2 cut(s) 61, 451
BspLI GGNNCC 3 cut(s) 72, 522, 559
BspMI ACCTGC 1 cut(s) 356
BspPI GGATC 1 cut(s) 367
BspT107I GGYRCC 1 cut(s) 557
BsrDI GCAATG 1 cut(s) 540
BsrI ACTGG 3 cut(s) 309, 441, 597
BssECI CCNNGG 1 cut(s) 553
BssMI GATC 1 cut(s) 372
BssT1I CCWWGG 1 cut(s) 553
Bst4CI ACNGT 1 cut(s) 410
Bst6I CTCTTC 1 cut(s) 194
BstC8I GCNNGC 2 cut(s) 211, 531
BstDEI CTNAG 2 cut(s) 288, 402
BstF5I GGATG 3 cut(s) 96, 134, 586
BstKTI GATC 1 cut(s) 375
BstMAI GTCTC 3 cut(s) 191, 389, 424
BstMBI GATC 1 cut(s) 372
BstMWI GCNNNNNNNGC 3 cut(s) 330, 455, 535
BstV1I GCAGC 1 cut(s) 336
BstV2I GAAGAC 1 cut(s) 119
BstX2I RGATCY 1 cut(s) 372
BstXI CCANNNNNNTGG 1 cut(s) 145
BstYI RGATCY 1 cut(s) 372
BsuRI GGCC 1 cut(s) 106
BtsCI GGATG 3 cut(s) 96, 134, 586
BtsI GCAGTG 1 cut(s) 524
BtsIMutI CAGTG 1 cut(s) 524
BveI ACCTGC 1 cut(s) 356
Cac8I GCNNGC 2 cut(s) 211, 531
CciI TCATGA 2 cut(s) 61, 451
Cfr13I GGNCC 1 cut(s) 122
Csp6I GTAC 2 cut(s) 142, 571
CviAII CATG 4 cut(s) 62, 139, 214, 452
CviQI GTAC 2 cut(s) 142, 571
DdeI CTNAG 2 cut(s) 288, 402
DpnI GATC 1 cut(s) 374
DpnII GATC 1 cut(s) 372
DraIII CACNNNGTG 1 cut(s) 482
EaeI YGGCCR 1 cut(s) 104
Eam1104I CTCTTC 1 cut(s) 194
EarI CTCTTC 1 cut(s) 194
Eco130I CCWWGG 1 cut(s) 553
Eco47I GGWCC 1 cut(s) 122
EcoT14I CCWWGG 1 cut(s) 553
ErhI CCWWGG 1 cut(s) 553
FaeI CATG 4 cut(s) 65, 142, 217, 455
FaiI YATR 8 cut(s) 63, 131, 140, 177, 215, 255, 453, 578
FaqI GGGAC 1 cut(s) 414
FatI CATG 4 cut(s) 61, 138, 213, 451
Fnu4HI GCNGC 1 cut(s) 325
FokI GGATG 3 cut(s) 103, 121, 593
Fsp4HI GCNGC 1 cut(s) 325
FspBI CTAG 1 cut(s) 515
GluI GCNGC 1 cut(s) 325
GsuI CTGGAG 1 cut(s) 458
HaeIII GGCC 1 cut(s) 106
Hin1II CATG 4 cut(s) 65, 142, 217, 455
HindIII AAGCTT 2 cut(s) 98, 602
HinfI GANTC 3 cut(s) 43, 356, 511
Hpy188I TCNGA 2 cut(s) 361, 403
Hpy188III TCNNGA 3 cut(s) 62, 376, 452
HpyAV CCTTC 1 cut(s) 232
HpyCH4III ACNGT 1 cut(s) 410
HpyCH4V TGCA 2 cut(s) 51, 213
HpyF10VI GCNNNNNNNGC 3 cut(s) 330, 455, 535
HpyF3I CTNAG 2 cut(s) 288, 402
Hsp92II CATG 4 cut(s) 65, 142, 217, 455
Kzo9I GATC 1 cut(s) 372
LmnI GCTCC 3 cut(s) 272, 284, 321
LpnPI CCDG 7 cut(s) 87, 223, 290, 351, 422, 515, 578
Lsp1109I GCAGC 1 cut(s) 336
LweI GCATC 1 cut(s) 196
MaeI CTAG 1 cut(s) 515
MalI GATC 1 cut(s) 374
MboI GATC 1 cut(s) 372
MboII GAAGA 2 cut(s) 124, 181
MflI RGATCY 1 cut(s) 372
MlsI TGGCCA 1 cut(s) 106
MluCI AATT 1 cut(s) 334
MluNI TGGCCA 1 cut(s) 106
MlyI GAGTC 1 cut(s) 520
MmeI TCCRAC 2 cut(s) 48, 467
MnlI CCTC 7 cut(s) 25, 157, 292, 312, 385, 433, 496
Mox20I TGGCCA 1 cut(s) 106
MscI TGGCCA 1 cut(s) 106
MseI TTAA 2 cut(s) 159, 599
Msp20I TGGCCA 1 cut(s) 106
MwoI GCNNNNNNNGC 3 cut(s) 330, 455, 535
NdeII GATC 1 cut(s) 372
NlaIII CATG 4 cut(s) 65, 142, 217, 455
NlaIV GGNNCC 3 cut(s) 72, 522, 559
PagI TCATGA 2 cut(s) 61, 451
PfeI GAWTC 2 cut(s) 43, 356
PkrI GCNGC 1 cut(s) 326
PleI GAGTC 1 cut(s) 519
PpsI GAGTC 1 cut(s) 519
PspN4I GGNNCC 3 cut(s) 72, 522, 559
PspPI GGNCC 1 cut(s) 122
PsuI RGATCY 1 cut(s) 372
RsaI GTAC 2 cut(s) 143, 572
RsaNI GTAC 2 cut(s) 142, 571
SaqAI TTAA 2 cut(s) 159, 599
SatI GCNGC 1 cut(s) 325
Sau3AI GATC 1 cut(s) 372
Sau96I GGNCC 1 cut(s) 122
SchI GAGTC 1 cut(s) 520
SetI ASST 7 cut(s) 102, 243, 289, 370, 444, 460, 606
SfaNI GCATC 1 cut(s) 196
SinI GGWCC 1 cut(s) 122
Sse9I AATT 1 cut(s) 334
SspMI CTAG 1 cut(s) 515
StyI CCWWGG 1 cut(s) 553
TaaI ACNGT 1 cut(s) 410
TaqI TCGA 1 cut(s) 95
TasI AATT 1 cut(s) 334
TatI WGTACW 2 cut(s) 141, 570
TfiI GAWTC 2 cut(s) 43, 356
Tru1I TTAA 2 cut(s) 159, 599
Tru9I TTAA 2 cut(s) 159, 599
TscAI CASTG 1 cut(s) 531
TseI GCWGC 1 cut(s) 324
TspDTI ATGAA 5 cut(s) 50, 230, 243, 460, 468
TspRI CASTG 1 cut(s) 531
VpaK11BI GGWCC 1 cut(s) 122
XcmI CCANNNNNNNNNTGG 1 cut(s) 574
XspI CTAG 1 cut(s) 515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.