Rroxscaffold_7G00213300

UDP-glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000284
Physical Location & Seq
Forward (+)
63748242 .. 63752797
4556 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00213300.1

Sequence Viewer

Length: 1407 bp
ATGCAAAACCATAACAGAGAAATGGAGAAAGAACAGAGAGTCTACAAAGCTCACTGTTTGGTCTTTCCCTATCCTAGTCAAGGCCATATTAACCCTTTGATTCAATTTTCTAAGCTTTTAGATCACAAAGGAGTCAAAGTCACACTGGTTACTACTCGTTTTTTCTACTATACAATGTACAGAGGATCAAGTTGCACCGCACTTGAGACTATCTCACTGGAGACCATCTCCGATGGTTATGACGAAGGTTGGAAAACGCAGGGAGTAAGTATTCAGGTGTATTTGGAGAGCCTTCGGAAAGTAGGGTCGCAGACTTTGGCTGAGCTCCTTGAGAAGCTATCCGGCTCAGGGTGCCCAGTTGACTGTCTTGTTTATGATGCATTCATGCCTTGGCCTTTGGACATTGCTAAGAAGTTTGGAATACTCGGGGCTGTTTTCTTTACTCAATCTTGTGCTGTTGACAACATTTACAATCATGTCAACAAAGGGCTACTGAAACTTCCTCTTACTGACTCGGAGATTTCACTTCCCGGGATGCCACCACTTGAGCCTTTAGACCTGCAATCTTTTGTATATGATTTCGAGTCTTACCCAGCTTTCTTTGAAGTTGTTATTGGTCAGTTCTCCACTGTTGACAAAGCTGATTGGGTCCTCTGCAACACATTTTATGAGTTGGAAGAACAGGTGGTGGATTGGATGTCAAAGTTTTGGCCACTGAGGACCATTGGACCAACTATACCATCTAACTATTTGGATAACCGACTTGAAGATGACAAAGGTTATGGCGTTGACCTCTTTAAATCCAACAATGATGCGTGCATGAAATGGTTAAACGAACATCCAAAGAACTCTGTTGCTTACGTCTCATTCGGCAGCGCTGCAGAACTGGGACTTGAGCAAATGGAGGAACTGGCATGGGGTTTGAGGAGAAGCAAAAGCAAGTTCTTGTGGGTGGTTATAGAATCAGAAGCAGCTAAAGTCCCCAAAAGGTTCATCGAGGAGACAGCTGAGAAGGGTTTGGTAGTTTCATGGTGCTCCCAACTGGAGGTTTTGGCTCATGAAGCTGTCGGATGCTTCATTACACATTGTGGTTGGAACTCAACTTTGGAGTCTCTAAGTTTGGGAGTTCCATTAGTGGCAATGCCACAATGGAGTGACCAAAGCACCAATGCCAAGTACATAAGGGATGTGTGGAAGATAGGGGTTAAAGCTCAACCTGATGAGAAAGGCATTGTAAGGCGAGAAGAACTAGAGCATTGTATGAGTGAAATCATGGAAGGGGAAAGAGGAAAAGAAATACAAAAGAATGCCATGAAATGGAAAGATTTGGCTAGAAAGGCAGTGAATGAAGGAGGAAGTTCCGACAAAAACATTGATGAGTTCATTGCAACGTTGGTTAAGCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko00380 ko00966 ko01110 ko01210 map00380 map00966 map01110 map01210
Pfam Domains
Protein Families
UDPGT

Protein Analysis

468

Amino Acids

53.12

Weight (kDa)

5.28

Isoelectric Point (pI)

46.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 274 - 440 1.4e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 567
AccB1I GGYRCC 1 cut(s) 351
AccB7I CCANNNNNTGG 1 cut(s) 1317
AccI GTMKAC 1 cut(s) 42
AciI CCGC 1 cut(s) 198
AclI AACGTT 1 cut(s) 1391
AclWI GGATC 1 cut(s) 193
AcoI YGGCCR 1 cut(s) 710
AdeI CACNNNGTG 1 cut(s) 1088
AfaI GTAC 2 cut(s) 179, 1178
AfeI AGCGCT 1 cut(s) 877
AfiI CCNNNNNNNGG 4 cut(s) 80, 348, 1045, 1317
AgsI TTSAA 3 cut(s) 104, 605, 767
AjuI GAANNNNNNNTTGG 4 cut(s) 597, 629, 1088, 1120
Alw21I GWGCWC 2 cut(s) 327, 1037
Alw26I GTCTC 5 cut(s) 200, 215, 868, 995, 1116
AlwI GGATC 1 cut(s) 193
Ama87I CYCGRG 2 cut(s) 425, 530
Aor51HI AGCGCT 1 cut(s) 877
AoxI GGCC 3 cut(s) 82, 392, 710
ApeKI GCWGC 3 cut(s) 873, 878, 971
AspLEI GCGC 1 cut(s) 878
AspS9I GGNCC 3 cut(s) 649, 720, 728
AsuC2I CCSGG 2 cut(s) 531, 532
AvaI CYCGRG 2 cut(s) 425, 530
AvaII GGWCC 3 cut(s) 649, 720, 728
BaeGI GKGCMC 1 cut(s) 356
BalI TGGCCA 1 cut(s) 712
BanI GGYRCC 1 cut(s) 351
BanII GRGCYC 1 cut(s) 327
Bbv12I GWGCWC 2 cut(s) 327, 1037
BbvI GCAGC 3 cut(s) 865, 885, 983
BccI CCATC 3 cut(s) 227, 233, 748
BcnI CCSGG 2 cut(s) 531, 532
BcoDI GTCTC 5 cut(s) 200, 215, 868, 995, 1116
BfaI CTAG 3 cut(s) 75, 1250, 1332
BfmI CTRYAG 1 cut(s) 879
BfoI RGCGCY 1 cut(s) 879
BfuAI ACCTGC 1 cut(s) 567
BisI GCNGC 3 cut(s) 874, 879, 972
BlpI GCTNAGC 1 cut(s) 321
BlsI GCNGC 3 cut(s) 875, 880, 973
Bme1390I CCNGG 2 cut(s) 531, 532
Bme18I GGWCC 3 cut(s) 649, 720, 728
BmeT110I CYCGRG 2 cut(s) 425, 530
BmgT120I GGNCC 3 cut(s) 649, 720, 728
BmiI GGNNCC 2 cut(s) 353, 650
BmrFI CCNGG 2 cut(s) 531, 532
BmrI ACTGGG 2 cut(s) 350, 896
BmsI GCATC 4 cut(s) 367, 525, 802, 1061
BmuI ACTGGG 2 cut(s) 350, 896
BplI GAGNNNNNCTC 4 cut(s) 197, 229, 212, 244
BpmI CTGGAG 2 cut(s) 239, 1064
Bpu10I CCTNAGC 1 cut(s) 346
Bpu1102I GCTNAGC 1 cut(s) 321
BpuEI CTTGAG 4 cut(s) 224, 350, 566, 914
BpuMI CCSGG 2 cut(s) 531, 532
BsaI GGTCTC 1 cut(s) 215
BsaJI CCNNGG 2 cut(s) 389, 530
BsaXI ACNNNNNCTCC 2 cut(s) 123, 153
Bsc4I CCNNNNNNNGG 4 cut(s) 80, 348, 1045, 1317
Bse1I ACTGG 6 cut(s) 150, 222, 356, 891, 915, 1047
Bse3DI GCAATG 3 cut(s) 402, 1146, 1383
BseDI CCNNGG 2 cut(s) 389, 530
BseGI GGATG 5 cut(s) 540, 702, 838, 1076, 1192
BseLI CCNNNNNNNGG 4 cut(s) 80, 348, 1045, 1317
BseMI GCAATG 3 cut(s) 402, 1146, 1383
BseMII CTCAG 4 cut(s) 312, 360, 707, 999
BseNI ACTGG 6 cut(s) 150, 222, 356, 891, 915, 1047
BseRI GAGGAG 2 cut(s) 940, 1013
BseSI GKGCMC 1 cut(s) 356
BseXI GCAGC 3 cut(s) 865, 885, 983
BseYI CCCAGC 1 cut(s) 592
BshFI GGCC 3 cut(s) 84, 394, 712
BshNI GGYRCC 1 cut(s) 351
BsiHKAI GWGCWC 2 cut(s) 327, 1037
BsiHKCI CYCGRG 2 cut(s) 425, 530
BsiSI CCGG 2 cut(s) 342, 531
BslFI GGGAC 2 cut(s) 903, 965
BslI CCNNNNNNNGG 4 cut(s) 80, 348, 1045, 1317
BsmAI GTCTC 5 cut(s) 200, 215, 868, 995, 1116
BsmBI CGTCTC 1 cut(s) 868
BsmFI GGGAC 2 cut(s) 903, 965
BsmI GAATGC 2 cut(s) 380, 1312
BsnI GGCC 3 cut(s) 84, 394, 712
Bso31I GGTCTC 1 cut(s) 215
BsoBI CYCGRG 2 cut(s) 425, 530
Bsp1286I GDGCHC 3 cut(s) 327, 356, 1037
Bsp1407I TGTACA 1 cut(s) 177
Bsp143I GATC 2 cut(s) 121, 185
Bsp1720I GCTNAGC 1 cut(s) 321
BspACI CCGC 1 cut(s) 198
BspANI GGCC 3 cut(s) 84, 394, 712
BspCNI CTCAG 4 cut(s) 313, 359, 708, 1000
BspHI TCATGA 1 cut(s) 1057
BspLI GGNNCC 2 cut(s) 353, 650
BspMAI CTGCAG 1 cut(s) 883
BspMI ACCTGC 1 cut(s) 567
BspPI GGATC 1 cut(s) 193
BspT107I GGYRCC 1 cut(s) 351
BspTNI GGTCTC 1 cut(s) 215
BsrDI GCAATG 3 cut(s) 402, 1146, 1383
BsrGI TGTACA 1 cut(s) 177
BsrI ACTGG 6 cut(s) 150, 222, 356, 891, 915, 1047
BssECI CCNNGG 2 cut(s) 389, 530
BssMI GATC 2 cut(s) 121, 185
BssT1I CCWWGG 1 cut(s) 389
Bst4CI ACNGT 3 cut(s) 56, 365, 631
BstAUI TGTACA 1 cut(s) 177
BstC8I GCNNGC 1 cut(s) 817
BstDEI CTNAG 7 cut(s) 111, 321, 346, 408, 716, 1008, 1115
BstENI CCTNNNNNAGG 1 cut(s) 78
BstF5I GGATG 5 cut(s) 540, 702, 838, 1076, 1192
BstH2I RGCGCY 1 cut(s) 879
BstHHI GCGC 1 cut(s) 878
BstKTI GATC 2 cut(s) 124, 188
BstMAI GTCTC 5 cut(s) 200, 215, 868, 995, 1116
BstMBI GATC 2 cut(s) 121, 185
BstMWI GCNNNNNNNGC 3 cut(s) 351, 1061, 1337
BstSCI CCNGG 2 cut(s) 529, 530
BstSFI CTRYAG 1 cut(s) 879
BstSLI GKGCMC 1 cut(s) 356
BstV1I GCAGC 3 cut(s) 865, 885, 983
BsuRI GGCC 3 cut(s) 84, 394, 712
BtsCI GGATG 5 cut(s) 540, 702, 838, 1076, 1192
BtsI GCAGTG 1 cut(s) 1347
BtsIMutI CAGTG 6 cut(s) 52, 143, 215, 627, 713, 1347
BveI ACCTGC 1 cut(s) 567
Cac8I GCNNGC 1 cut(s) 817
CciI TCATGA 1 cut(s) 1057
CfoI GCGC 1 cut(s) 878
Cfr13I GGNCC 3 cut(s) 649, 720, 728
Cfr9I CCCGGG 1 cut(s) 530
Csp6I GTAC 2 cut(s) 178, 1177
CviAII CATG 8 cut(s) 385, 476, 820, 915, 1029, 1058, 1273, 1312
CviQI GTAC 2 cut(s) 178, 1177
DdeI CTNAG 7 cut(s) 111, 321, 346, 408, 716, 1008, 1115
DpnI GATC 2 cut(s) 123, 187
DpnII GATC 2 cut(s) 121, 185
DraI TTTAAA 1 cut(s) 799
DraIII CACNNNGTG 1 cut(s) 1088
EaeI YGGCCR 1 cut(s) 710
Ecl136II GAGCTC 1 cut(s) 325
Eco130I CCWWGG 1 cut(s) 389
Eco24I GRGCYC 1 cut(s) 327
Eco31I GGTCTC 1 cut(s) 215
Eco47I GGWCC 3 cut(s) 649, 720, 728
Eco47III AGCGCT 1 cut(s) 877
Eco53kI GAGCTC 1 cut(s) 325
Eco88I CYCGRG 2 cut(s) 425, 530
EcoICRI GAGCTC 1 cut(s) 325
EcoNI CCTNNNNNAGG 1 cut(s) 78
EcoO109I RGGNCCY 1 cut(s) 649
EcoT14I CCWWGG 1 cut(s) 389
EcoT22I ATGCAT 1 cut(s) 382
EcoT38I GRGCYC 1 cut(s) 327
ErhI CCWWGG 1 cut(s) 389
Esp3I CGTCTC 1 cut(s) 868
FaeI CATG 8 cut(s) 388, 479, 823, 918, 1032, 1061, 1276, 1315
FaqI GGGAC 2 cut(s) 903, 965
FatI CATG 8 cut(s) 384, 475, 819, 914, 1028, 1057, 1272, 1311
FblI GTMKAC 1 cut(s) 42
Fnu4HI GCNGC 3 cut(s) 874, 879, 972
FokI GGATG 5 cut(s) 547, 709, 825, 1083, 1199
FriOI GRGCYC 1 cut(s) 327
Fsp4HI GCNGC 3 cut(s) 874, 879, 972
FspBI CTAG 3 cut(s) 75, 1250, 1332
GlaI GCGC 1 cut(s) 877
GluI GCNGC 3 cut(s) 874, 879, 972
GsaI CCCAGC 1 cut(s) 596
GsuI CTGGAG 2 cut(s) 239, 1064
HaeII RGCGCY 1 cut(s) 879
HaeIII GGCC 3 cut(s) 84, 394, 712
HapII CCGG 2 cut(s) 342, 531
HhaI GCGC 1 cut(s) 878
Hin1II CATG 8 cut(s) 388, 479, 823, 918, 1032, 1061, 1276, 1315
Hin6I GCGC 1 cut(s) 876
HinP1I GCGC 1 cut(s) 876
HincII GTYRAC 5 cut(s) 361, 460, 481, 634, 790
HindII GTYRAC 5 cut(s) 361, 460, 481, 634, 790
HindIII AAGCTT 1 cut(s) 113
HinfI GANTC 7 cut(s) 39, 100, 132, 512, 584, 962, 1109
HpaII CCGG 2 cut(s) 342, 531
Hpy166II GTNNAC 6 cut(s) 43, 361, 460, 481, 634, 790
Hpy188I TCNGA 6 cut(s) 232, 297, 517, 967, 1070, 1363
Hpy188III TCNNGA 1 cut(s) 1058
Hpy8I GTNNAC 6 cut(s) 43, 361, 460, 481, 634, 790
HpyAV CCTTC 5 cut(s) 239, 302, 1006, 1271, 1343
HpyCH4III ACNGT 3 cut(s) 56, 365, 631
HpyCH4IV ACGT 2 cut(s) 861, 1391
HpyCH4V TGCA 8 cut(s) 4, 195, 380, 562, 657, 819, 881, 1388
HpyF10VI GCNNNNNNNGC 3 cut(s) 351, 1061, 1337
HpyF3I CTNAG 7 cut(s) 111, 321, 346, 408, 716, 1008, 1115
HpySE526I ACGT 2 cut(s) 861, 1391
Hsp92II CATG 8 cut(s) 388, 479, 823, 918, 1032, 1061, 1276, 1315
HspAI GCGC 1 cut(s) 876
Kzo9I GATC 2 cut(s) 121, 185
LmnI GCTCC 2 cut(s) 330, 1040
Lsp1109I GCAGC 3 cut(s) 865, 885, 983
LweI GCATC 4 cut(s) 367, 525, 802, 1061
MaeI CTAG 3 cut(s) 75, 1250, 1332
MaeII ACGT 2 cut(s) 861, 1391
MaeIII GTNAC 3 cut(s) 139, 148, 1154
MalI GATC 2 cut(s) 123, 187
MboI GATC 2 cut(s) 121, 185
MboII GAAGA 4 cut(s) 689, 779, 1207, 1256
MhlI GDGCHC 3 cut(s) 327, 356, 1037
MlsI TGGCCA 1 cut(s) 712
MluCI AATT 1 cut(s) 104
MluNI TGGCCA 1 cut(s) 712
MlyI GAGTC 5 cut(s) 48, 141, 506, 593, 1118
MmeI TCCRAC 6 cut(s) 230, 654, 828, 1048, 1073, 1386
Mox20I TGGCCA 1 cut(s) 712
Mph1103I ATGCAT 1 cut(s) 382
MscI TGGCCA 1 cut(s) 712
MseI TTAA 6 cut(s) 90, 798, 830, 1206, 1398, 1405
Msp20I TGGCCA 1 cut(s) 712
MspA1I CMGCKG 1 cut(s) 1007
MspI CCGG 2 cut(s) 342, 531
MspR9I CCNGG 2 cut(s) 531, 532
Mva1269I GAATGC 2 cut(s) 380, 1312
MwoI GCNNNNNNNGC 3 cut(s) 351, 1061, 1337
NciI CCSGG 2 cut(s) 531, 532
NdeII GATC 2 cut(s) 121, 185
NlaIII CATG 8 cut(s) 388, 479, 823, 918, 1032, 1061, 1276, 1315
NlaIV GGNNCC 2 cut(s) 353, 650
NmuCI GTSAC 2 cut(s) 139, 1154
NsiI ATGCAT 1 cut(s) 382
PagI TCATGA 1 cut(s) 1057
PctI GAATGC 2 cut(s) 380, 1312
PfeI GAWTC 2 cut(s) 100, 962
PflMI CCANNNNNTGG 1 cut(s) 1317
PkrI GCNGC 3 cut(s) 875, 880, 973
PleI GAGTC 5 cut(s) 47, 140, 506, 592, 1117
PpsI GAGTC 5 cut(s) 47, 140, 506, 592, 1117
PpuMI RGGWCCY 1 cut(s) 649
Psp124BI GAGCTC 1 cut(s) 327
Psp1406I AACGTT 1 cut(s) 1391
Psp5II RGGWCCY 1 cut(s) 649
PspFI CCCAGC 1 cut(s) 592
PspN4I GGNNCC 2 cut(s) 353, 650
PspPI GGNCC 3 cut(s) 649, 720, 728
PspPPI RGGWCCY 1 cut(s) 649
PstI CTGCAG 1 cut(s) 883
PvuII CAGCTG 1 cut(s) 1007
RsaI GTAC 2 cut(s) 179, 1178
RsaNI GTAC 2 cut(s) 178, 1177
SacI GAGCTC 1 cut(s) 327
SaqAI TTAA 6 cut(s) 90, 798, 830, 1206, 1398, 1405
SatI GCNGC 3 cut(s) 874, 879, 972
Sau3AI GATC 2 cut(s) 121, 185
Sau96I GGNCC 3 cut(s) 649, 720, 728
SchI GAGTC 5 cut(s) 48, 141, 506, 593, 1118
ScrFI CCNGG 2 cut(s) 531, 532
SduI GDGCHC 3 cut(s) 327, 356, 1037
SfaNI GCATC 4 cut(s) 367, 525, 802, 1061
SfcI CTRYAG 1 cut(s) 879
SinI GGWCC 3 cut(s) 649, 720, 728
SmaI CCCGGG 1 cut(s) 532
SmlI CTYRAG 4 cut(s) 203, 329, 545, 893
SmoI CTYRAG 4 cut(s) 203, 329, 545, 893
Sse9I AATT 1 cut(s) 104
SsiI CCGC 1 cut(s) 198
SspMI CTAG 3 cut(s) 75, 1250, 1332
SstI GAGCTC 1 cut(s) 327
StyD4I CCNGG 2 cut(s) 529, 530
StyI CCWWGG 1 cut(s) 389
TaaI ACNGT 3 cut(s) 56, 365, 631
TaiI ACGT 2 cut(s) 864, 1394
TaqI TCGA 2 cut(s) 582, 996
TasI AATT 1 cut(s) 104
TatI WGTACW 2 cut(s) 177, 1176
TfiI GAWTC 2 cut(s) 100, 962
Tru1I TTAA 6 cut(s) 90, 798, 830, 1206, 1398, 1405
Tru9I TTAA 6 cut(s) 90, 798, 830, 1206, 1398, 1405
TscAI CASTG 6 cut(s) 59, 150, 222, 634, 720, 1347
TseFI GTSAC 2 cut(s) 139, 1154
TseI GCWGC 3 cut(s) 873, 878, 971
Tsp45I GTSAC 2 cut(s) 139, 1154
TspDTI ATGAA 9 cut(s) 373, 836, 982, 1017, 1066, 1074, 1328, 1362, 1372
TspMI CCCGGG 1 cut(s) 530
TspRI CASTG 6 cut(s) 59, 150, 222, 634, 720, 1347
Van91I CCANNNNNTGG 1 cut(s) 1317
VpaK11BI GGWCC 3 cut(s) 649, 720, 728
XagI CCTNNNNNAGG 1 cut(s) 78
XmaI CCCGGG 1 cut(s) 530
XmiI GTMKAC 1 cut(s) 42
XspI CTAG 3 cut(s) 75, 1250, 1332
Zsp2I ATGCAT 1 cut(s) 382
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.